Information for 24-ATGCCATA (Motif 17)


Reverse Opposite:

p-value:1e-11
log p-value:-2.708e+01
Information Content per bp:1.963
Number of Target Sequences with motif245.0
Percentage of Target Sequences with motif5.61%
Number of Background Sequences with motif735.7
Percentage of Background Sequences with motif3.50%
Average Position of motif in Targets338.0 +/- 219.5bp
Average Position of motif in Background277.6 +/- 188.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ATGCCATA--
ATGCCAGACN

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATGCCATA-
ATGCCAACC

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------ATGCCATA---
NNNTCCATCCCATAANN

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATGCCATA
CGTGCCAAG

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATGCCATA
-TGCCAA-

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATGCCATA-
GGTGCCAAGT

pho/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ATGCCATA-----
GAAGCCATAACGGC

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATGCCATA-----
ACTATGCCAACCTACC

pho/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATGCCATA
--GCCATT

ZNF410/MA0752.1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGCCATA------
TCCATCCCATAATACTC