Information for 22-GTATAGTG (Motif 16)


Reverse Opposite:

p-value:1e-16
log p-value:-3.857e+01
Information Content per bp:1.796
Number of Target Sequences with motif544.0
Percentage of Target Sequences with motif12.45%
Number of Background Sequences with motif1815.3
Percentage of Background Sequences with motif8.64%
Average Position of motif in Targets376.8 +/- 282.7bp
Average Position of motif in Background283.1 +/- 198.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTATAGTG--
BTBRAGTGSN

tin/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTATAGTG
-TCAAGTG

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTATAGTG--
CTYRAGTGSY

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTATAGTG
GAGTATAA--

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTATAGTG---
-TTGAGTGSTT

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTATAGTG---
-TTRAGTGSYK

tin/MA0247.2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTATAGTG-
TTTCAAGTGG

tin/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTATAGTG
-TCAAGTG

vnd/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTATAGTG----
NTGTNAAGTGGNNN

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTATAGTG-
NTCAAGTGG