Information for 21-GGGCCCTT (Motif 15)


Reverse Opposite:

p-value:1e-18
log p-value:-4.264e+01
Information Content per bp:1.917
Number of Target Sequences with motif359.0
Percentage of Target Sequences with motif8.21%
Number of Background Sequences with motif1054.0
Percentage of Background Sequences with motif5.02%
Average Position of motif in Targets370.4 +/- 318.0bp
Average Position of motif in Background282.4 +/- 206.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NRG1/NRG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGGCCCTT
GGACCCT-

OsI_08196/MA1050.1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCCTT
GTGGGCCC--

TCP23/MA1066.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCCTT
GTGGGCCC--

TCP15/MA1062.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCCTT
GTGGGCCC--

NRG1(MacIsaac)/Yeast

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGGCCCTT
GGACCCT-

OJ1581_H09.2/MA1031.1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGCCCTT
GTGGGCCCAC

NRG1/MA0347.1/Jaspar

Match Rank:7
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------GGGCCCTT------
NGCNNTGGACCCTGATNNNG

TCP20/MA1065.1/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGGCCCTT
NNGTGGGCCC--

PCF2(TCP)/Oryza sativa/AthaMap

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCCTT
GTGGGNCCCN

ARALYDRAFT_495258/MA1095.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCCTT
GTGGGCCC--