Information for 17-GAAAATTT (Motif 13)


Reverse Opposite:

p-value:1e-22
log p-value:-5.175e+01
Information Content per bp:1.917
Number of Target Sequences with motif1039.0
Percentage of Target Sequences with motif23.77%
Number of Background Sequences with motif3745.7
Percentage of Background Sequences with motif17.84%
Average Position of motif in Targets357.0 +/- 330.9bp
Average Position of motif in Background281.4 +/- 177.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SFP1/SacCer-Promoters/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GAAAATTT----
RAAAATTTTTHH

cad/dmmpmm(Down)/fly

Match Rank:2
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GAAAATTT
AAAAATTT

SUM1/MA0398.1/Jaspar

Match Rank:3
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GAAAATTT-
AAAAATTTT

SFP1/MA0378.1/Jaspar

Match Rank:4
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAATTT--------
CNGNAGAAAATTTTTTNNNNT

STB3/MA0390.1/Jaspar

Match Rank:5
Score:0.73
Offset:-7
Orientation:reverse strand
Alignment:-------GAAAATTT------
NNNNAGTGAAAAATTTTNGAC

AHL12/MA0932.1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GAAAATTT
AATTAATT

abd-A/dmmpmm(Down)/fly

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GAAAATTT
-ATAAAT-

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAATTT-
NNCNNAACAATTNT

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAATTT----
TNCNNAACAATTTTTNC

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GAAAATTT
NATGGAAAAN--