Information for 15-GAGATGAG (Motif 11)


Reverse Opposite:

p-value:1e-25
log p-value:-5.797e+01
Information Content per bp:1.915
Number of Target Sequences with motif397.0
Percentage of Target Sequences with motif9.08%
Number of Background Sequences with motif1094.9
Percentage of Background Sequences with motif5.21%
Average Position of motif in Targets375.5 +/- 325.1bp
Average Position of motif in Background283.6 +/- 193.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TOD6?/SacCer-Promoters/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GAGATGAG--
GCGATGAGMT

TOD6/MA0350.1/Jaspar

Match Rank:2
Score:0.86
Offset:-5
Orientation:reverse strand
Alignment:-----GAGATGAG--------
NNANNGCGATGAGCTNNNNNN

DOT6/MA0351.1/Jaspar

Match Rank:3
Score:0.85
Offset:-5
Orientation:reverse strand
Alignment:-----GAGATGAG--------
ANGANGCGATGAGGTGCNNNN

CHA4(MacIsaac)/Yeast

Match Rank:4
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GAGATGAG
TGCGATGAG

GAT1/GAT1_RAPA/1-GZF3,2-GLN3(Harbison)/Yeast

Match Rank:5
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GAGATGAG
-AGATAAG

GAT1(MacIsaac)/Yeast

Match Rank:6
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GAGATGAG
-AGATAAG

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GAGATGAG-
NNGAGATAAGA

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GAGATGAG--
NAGATAAGNN

GZF3/Literature(Harbison)/Yeast

Match Rank:9
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GAGATGAG
--GATAAG

GZF3(MacIsaac)/Yeast

Match Rank:10
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GAGATGAG
--GATAAG