Information for 14-CGCNCTTC (Motif 9)


Reverse Opposite:

p-value:1e-25
log p-value:-5.757e+01
Information Content per bp:1.416
Number of Target Sequences with motif1559.0
Percentage of Target Sequences with motif41.67%
Number of Background Sequences with motif6630.9
Percentage of Background Sequences with motif33.48%
Average Position of motif in Targets408.5 +/- 340.8bp
Average Position of motif in Background282.8 +/- 233.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGCNCTTC
CTCTCTCY

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGCNCTTC
GCGCGCTA-

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CGCNCTTC-
---GCTTCC

FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CGCNCTTC
HHCACGCGCBTN

FHY3/MA0557.1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CGCNCTTC
CTCACGCGCTCA

DAL82/MA0291.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGCNCTTC
GCGCACATT

che-1/MA0260.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGCNCTTC
--GGTTTC

MA0260.1_che-1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGCNCTTC
--GGTTTC

CMTA2/MA0969.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCNCTTC
ACGCGGNNN

Trl/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGCNCTTC
TTGCTCTCTC-