Information for 13-CACACACA (Motif 8)


Reverse Opposite:

p-value:1e-25
log p-value:-5.803e+01
Information Content per bp:1.812
Number of Target Sequences with motif637.0
Percentage of Target Sequences with motif17.03%
Number of Background Sequences with motif2229.3
Percentage of Background Sequences with motif11.26%
Average Position of motif in Targets425.0 +/- 315.6bp
Average Position of motif in Background251.6 +/- 248.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.69
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CACACACA--
CACACACACA

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CACACACA
GCCACACCCA

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CACACACA-
GGCCACACCCAN

daf-12/MA0538.1/Jaspar

Match Rank:4
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----CACACACA---
NACGCACACACACAC

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----CACACACA---
AGCGGCACACACGCAA

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CACACACA
GGCCACACCCA

MET31(MacIsaac)/Yeast

Match Rank:7
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CACACACA
GCCACACC--

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CACACACA-
GGACACACCCCC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CACACACA
CRCCCACGCA

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:10
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CACACACA--
GCCACRCCCACY