Information for 12-GSGGTCGA (Motif 7)


Reverse Opposite:

p-value:1e-26
log p-value:-6.203e+01
Information Content per bp:1.828
Number of Target Sequences with motif257.0
Percentage of Target Sequences with motif6.87%
Number of Background Sequences with motif646.6
Percentage of Background Sequences with motif3.27%
Average Position of motif in Targets409.8 +/- 408.3bp
Average Position of motif in Background301.3 +/- 238.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Adf1/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GSGGTCGA
CGCGGTCG-

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GSGGTCGA----
CTCCAGGGGTCAATTGA

OPI1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GSGGTCGA
-GATTCGA

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GSGGTCGA--
NTNTGGGGGGTCNNNA

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GSGGTCGA----
GGCGAGGGGTCAAGGGC

ZBTB7B/MA0694.1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GSGGTCGA
TTCGGTGGTCGC

XBP1/MA0414.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GSGGTCGA-
--NCTCGAG

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GSGGTCGA----
NTNNNGGGGTCANGNNN

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GSGGTCGA
NTCGGTGGTCGC

ZBTB7A/MA0750.1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GSGGTCGA-
TCGGTGGTCGCN