Information for 13-GTATGGGT (Motif 9)


Reverse Opposite:

p-value:1e-28
log p-value:-6.614e+01
Information Content per bp:1.885
Number of Target Sequences with motif418.0
Percentage of Target Sequences with motif9.21%
Number of Background Sequences with motif1055.9
Percentage of Background Sequences with motif5.14%
Average Position of motif in Targets448.0 +/- 356.6bp
Average Position of motif in Background290.3 +/- 198.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RAP1/MA0359.1/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GTATGGGT-
TGTATGGGTG

RAP1(MacIsaac)/Yeast

Match Rank:2
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--GTATGGGT--
GTGTATGGGTGT

SFP1(MacIsaac)/Yeast

Match Rank:3
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GTATGGGT
ATGTACGGGT

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GTATGGGT
ATGTACGGGT

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:5
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GTATGGGT-
TGTACGGGTG

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GTATGGGT-
ATGTACGGGTG

FHL1(MacIsaac)/Yeast

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTATGGGT
ATGTACGGAT

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTATGGGT--
GGAGGGGGAA

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTATGGGT
GGTACGG--

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GTATGGGT---
NNTNNTGTCTGGNNTNG