Information for 10-CACACACA (Motif 8)


Reverse Opposite:

p-value:1e-33
log p-value:-7.683e+01
Information Content per bp:1.813
Number of Target Sequences with motif801.0
Percentage of Target Sequences with motif17.64%
Number of Background Sequences with motif2362.8
Percentage of Background Sequences with motif11.51%
Average Position of motif in Targets448.8 +/- 335.7bp
Average Position of motif in Background279.1 +/- 237.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.88
Offset:0
Orientation:forward strand
Alignment:CACACACA--
CACACACACA

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CACACACA
GCCACACCCA

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---CACACACA-
GGCCACACCCAN

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----CACACACA---
AGCGGCACACACGCAA

daf-12/MA0538.1/Jaspar

Match Rank:5
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----CACACACA---
NACGCACACACACAC

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CACACACA
GGCCACACCCA

MET31(MacIsaac)/Yeast

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CACACACA
GCCACACC--

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CACACACA-
GGACACACCCCC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CACACACA
CRCCCACGCA

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:10
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CACACACA--
GCCACRCCCACY