Information for 3-CGCGCGCG (Motif 3)


Reverse Opposite:

p-value:1e-75
log p-value:-1.737e+02
Information Content per bp:1.644
Number of Target Sequences with motif1818.0
Percentage of Target Sequences with motif40.04%
Number of Background Sequences with motif5615.6
Percentage of Background Sequences with motif27.36%
Average Position of motif in Targets449.2 +/- 331.9bp
Average Position of motif in Background284.9 +/- 238.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.65
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC30/MA0375.1/Jaspar

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CGCGCGCG
CGCGCGCG

RSC3/MA0374.1/Jaspar

Match Rank:2
Score:0.86
Offset:2
Orientation:forward strand
Alignment:CGCGCGCG-
--CGCGCGG

PB0095.1_Zfp161_1/Jaspar

Match Rank:3
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGCG-----
TGGCGCGCGCGCCTGA

SeqBias: CG-repeat

Match Rank:4
Score:0.85
Offset:0
Orientation:forward strand
Alignment:CGCGCGCG--
CGCGCGCGCG

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGCG
GGCACGTGCC

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CGCGCGCG
TAGCGCGC-

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGCG-----
NTCGCGCGCCTTNNN

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGCG
NNCGCGTGNN

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGCG-----
ANCGCGCGCCCTTNN

FHY3/MA0557.1/Jaspar

Match Rank:10
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGCG--
CTCACGCGCTCA