Information for 19-SCSCCCTY (Motif 12)


Reverse Opposite:

p-value:1e-16
log p-value:-3.830e+01
Information Content per bp:1.629
Number of Target Sequences with motif1834.0
Percentage of Target Sequences with motif40.39%
Number of Background Sequences with motif7059.8
Percentage of Background Sequences with motif34.39%
Average Position of motif in Targets446.5 +/- 359.1bp
Average Position of motif in Background298.2 +/- 219.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.51
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN4(MacIsaac)/Yeast

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:SCSCCCTY
-CCCCCTT

RGM1/MA0366.1/Jaspar

Match Rank:2
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:SCSCCCTY
--CCCCT-

MSN4/MA0342.1/Jaspar

Match Rank:3
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:SCSCCCTY
--CCCCT-

MSN2/MA0341.1/Jaspar

Match Rank:4
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:SCSCCCTY
--CCCCT-

btd/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--SCSCCCTY
ATCCGCCCCC

btd/MA0443.1/Jaspar

Match Rank:6
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-SCSCCCTY-
TCCGCCCCCT

MSN2(MacIsaac)/Yeast

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:SCSCCCTY
-GCCCCTT

GIS1/MA0306.1/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:forward strand
Alignment:SCSCCCTY--
-ACCCCTAAA

MSN2/MSN2_H2O2Hi/1-MSN2(Harbison)/Yeast

Match Rank:9
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:SCSCCCTY-
CCGCCCCTT

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:10
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---SCSCCCTY----
AAGCCCCCCAAAAAT