Information for 10-GCGTTCGA (Motif 7)


Reverse Opposite:

p-value:1e-36
log p-value:-8.495e+01
Information Content per bp:1.937
Number of Target Sequences with motif546.0
Percentage of Target Sequences with motif13.78%
Number of Background Sequences with motif1704.0
Percentage of Background Sequences with motif7.80%
Average Position of motif in Targets367.5 +/- 321.9bp
Average Position of motif in Background258.1 +/- 192.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

lin-14/MA0261.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GCGTTCGA
GTGTTC--

MA0261.1_lin-14/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GCGTTCGA
GTGTTC--

OPI1/Literature(Harbison)/Yeast

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GCGTTCGA
-GATTCGA

YER051W(MacIsaac)/Yeast

Match Rank:4
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GCGTTCGA-
---TTCGAA

XBP1/MA0414.1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GCGTTCGA-
--NCTCGAG

OPI1(MacIsaac)/Yeast

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCGTTCGA
CGGTTCG-

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCGTTCGA------
AGNGTTCTAATGANN

OPI1/MA0349.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCGTTCGA
CGGTTCG-

Adf1/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGTTCGA
CGCGGTCG-

SMZ/MA0553.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCGTTCGA--
--GTACGAGG