Information for 2-CGCGCGGC (Motif 2)


Reverse Opposite:

p-value:1e-106
log p-value:-2.447e+02
Information Content per bp:1.516
Number of Target Sequences with motif1489.0
Percentage of Target Sequences with motif37.59%
Number of Background Sequences with motif4836.0
Percentage of Background Sequences with motif22.15%
Average Position of motif in Targets410.7 +/- 304.7bp
Average Position of motif in Background265.9 +/- 230.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.72
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.90
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGCGG-

RSC30/MA0375.1/Jaspar

Match Rank:2
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
CGCGCGCG--

SUT1/MA0399.1/Jaspar

Match Rank:3
Score:0.85
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

SUT1(MacIsaac)/Yeast

Match Rank:4
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
GGCACGTGCC

MBP1/MA0329.1/Jaspar

Match Rank:6
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGC
NNCGCGT---

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:7
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGGC
TAGCGCGC---

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
GGCACGCGTC

h/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CGCGCGGC--
NNGGCACGCGCCAN

PB0095.1_Zfp161_1/Jaspar

Match Rank:10
Score:0.74
Offset:-7
Orientation:reverse strand
Alignment:-------CGCGCGGC-
NCANGCGCGCGCGCCA