Information for 24-ACTGCGCT (Motif 17)


Reverse Opposite:

p-value:1e-14
log p-value:-3.448e+01
Information Content per bp:1.684
Number of Target Sequences with motif919.0
Percentage of Target Sequences with motif23.20%
Number of Background Sequences with motif3967.4
Percentage of Background Sequences with motif18.17%
Average Position of motif in Targets418.3 +/- 331.8bp
Average Position of motif in Background264.7 +/- 194.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STP4/MA0397.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:ACTGCGCT---
--TGCGCTATC

STP3/MA0396.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ACTGCGCT---
--TGCGCTAGC

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ACTGCGCT---
AATCGCACTGCATTCCG

DAL82/MA0291.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACTGCGCT
AATGTGCGC-

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACTGCGCT---
-CTGACCTTTG

kni/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACTGCGCT-----
-GTGCTCTAGTTT

kni/MA0451.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACTGCGCT-----
-GTGCTCTANTTT

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACTGCGCT-
----NGCTN

CHA4/MA0283.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTGCGCT
TCTCCGCC

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACTGCGCT---
-CTGTTCCTGG