Information for 22-RCCCTCAC (Motif 15)


Reverse Opposite:

p-value:1e-16
log p-value:-3.830e+01
Information Content per bp:1.719
Number of Target Sequences with motif280.0
Percentage of Target Sequences with motif7.07%
Number of Background Sequences with motif905.4
Percentage of Background Sequences with motif4.15%
Average Position of motif in Targets398.7 +/- 300.7bp
Average Position of motif in Background257.7 +/- 193.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

z/dmmpmm(Down)/fly

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:RCCCTCAC
-CACTCA-

z/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:RCCCTCAC
-CACTCA-

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---RCCCTCAC-
RGGGCACTAACY

TBF1/MA0403.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-RCCCTCAC
AACCCTAA-

z/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:RCCCTCAC
-CACTCAA

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----RCCCTCAC----
AGCGGCACACACGCAA

RAP1(MacIsaac)/Yeast

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--RCCCTCAC--
ACACCCATACAC

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--RCCCTCAC
CTGCCCGCA-

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-RCCCTCAC-
TACCCGCATN

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-RCCCTCAC-
CRCCCACGCA