Information for 20-CCCATACA (Motif 14)


Reverse Opposite:

p-value:1e-16
log p-value:-3.885e+01
Information Content per bp:1.934
Number of Target Sequences with motif221.0
Percentage of Target Sequences with motif5.58%
Number of Background Sequences with motif657.3
Percentage of Background Sequences with motif3.01%
Average Position of motif in Targets368.9 +/- 250.4bp
Average Position of motif in Background268.9 +/- 187.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CCCATACA-
ACCCGTACAT

SFP1(MacIsaac)/Yeast

Match Rank:2
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA-
ACCCGTACAT

RAP1/MA0359.1/Jaspar

Match Rank:3
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CCCATACA
CACCCATACA

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CCCATACA
CACCCGTACA

RAP1(MacIsaac)/Yeast

Match Rank:5
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---CCCATACA-
ACACCCATACAC

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CCCATACA-
CACCCGTACAT

FHL1(MacIsaac)/Yeast

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA-
ATCCGTACAT

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCCATACA
-CCGTACN

sma-4/MA0925.1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA--
NNCCAGACANN

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA-
CCYMATAAAA