Information for 13-TAGGGCGC (Motif 9)


Reverse Opposite:

p-value:1e-29
log p-value:-6.686e+01
Information Content per bp:1.718
Number of Target Sequences with motif851.0
Percentage of Target Sequences with motif19.55%
Number of Background Sequences with motif2888.7
Percentage of Background Sequences with motif13.39%
Average Position of motif in Targets403.3 +/- 321.7bp
Average Position of motif in Background276.2 +/- 195.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TRB2/MA1073.1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGCGC
TTAGGGCA-

TBF1/MA0403.1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGCGC
NTAGGGTT-

P0510F09.23/MA1030.1/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TAGGGCGC
NNNTAGGGTT-

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TAGGGCGC
TAGCGCGC

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGCGC
CTAGGCCT-

STP3/MA0396.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCGC
GCTAGCGCA-

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCGC-----
ATAAGGGCGCGCGAT

STP4/MA0397.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCGC
GATAGCGCA-

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCGC-----
ATAAAGGCGCGCGAT

RGM1/MA0366.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAGGGCGC
-AGGGG--