Information for 11-ACACACAC (Motif 7)


Reverse Opposite:

p-value:1e-34
log p-value:-7.949e+01
Information Content per bp:1.835
Number of Target Sequences with motif379.0
Percentage of Target Sequences with motif8.71%
Number of Background Sequences with motif945.2
Percentage of Background Sequences with motif4.38%
Average Position of motif in Targets471.8 +/- 357.5bp
Average Position of motif in Background271.5 +/- 209.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.90
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: CA-repeat

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-ACACACAC-
CACACACACA

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----ACACACAC----
AGCGGCACACACGCAA

daf-12/MA0538.1/Jaspar

Match Rank:3
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---ACACACAC----
NACGCACACACACAC

MET31(MacIsaac)/Yeast

Match Rank:4
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ACACACAC-
-GCCACACC

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ACACACAC---
YCCGCCCACGCN

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ACACACAC--
GGACACACCCCC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ACACACAC---
-CRCCCACGCA

ALFIN1(HD-PHD)/Medicago sativa/AthaMap

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACACACAC---
-GCCCCACCTC

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ACACACAC-
GCCACRCCCACY

RAP1(MacIsaac)/Yeast

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACACACAC--
ACACCCATACAC