Information for 9-TTTTCCGC (Motif 6)


Reverse Opposite:

p-value:1e-41
log p-value:-9.581e+01
Information Content per bp:1.827
Number of Target Sequences with motif653.0
Percentage of Target Sequences with motif15.00%
Number of Background Sequences with motif1868.1
Percentage of Background Sequences with motif8.66%
Average Position of motif in Targets445.5 +/- 363.3bp
Average Position of motif in Background277.0 +/- 199.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

dl/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---TTTTCCGC
GGATTTTCC--

RGT1(MacIsaac)/Yeast

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCCGC-
TTTTTCCGGC

dl/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---TTTTCCGC
GGATTTTCCCC

dl/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---TTTTCCGC
GGATTTTCCC-

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TTTTCCGC
TTTTCCA-

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCCGC-
DTTTCCCGCC

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TTTTCCGC--
VDTTTCCCGCCA

EDS1/MA0294.1/Jaspar

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCCGC
ATTTTTCCG-

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TTTTCCGC-
ATTTTCCATT

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCCGC---
TTTTCGCGCGAA