Information for 23-AAGGGCCC (Motif 13)


Reverse Opposite:

p-value:1e-12
log p-value:-2.871e+01
Information Content per bp:1.956
Number of Target Sequences with motif148.0
Percentage of Target Sequences with motif3.40%
Number of Background Sequences with motif383.8
Percentage of Background Sequences with motif1.78%
Average Position of motif in Targets300.1 +/- 231.3bp
Average Position of motif in Background285.9 +/- 188.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NRG1/NRG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AAGGGCCC
-AGGGTCC

OsI_08196/MA1050.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AAGGGCCC--
--GGGCCCAC

TCP23/MA1066.1/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AAGGGCCC--
--GGGCCCAC

NRG1(MacIsaac)/Yeast

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AAGGGCCC
-AGGGTCC

OJ1581_H09.2/MA1031.1/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAGGGCCC--
GTGGGCCCAC

TCP15/MA1062.1/Jaspar

Match Rank:6
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AAGGGCCC--
--GGGCCCAC

NRG1/MA0347.1/Jaspar

Match Rank:7
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------AAGGGCCC------
CTAGATCAGGGTCCATCGCA

TCP20/MA1065.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AAGGGCCC----
--GGGCCCACCA

ARALYDRAFT_493022/MA1097.1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AAGGGCCC--
--GGGCCCAC

TCP2/MA1064.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGGGCCC--
GTGGGCCCAC