Information for 19-SCACTCGG (Motif 11)


Reverse Opposite:

p-value:1e-21
log p-value:-5.047e+01
Information Content per bp:1.705
Number of Target Sequences with motif201.0
Percentage of Target Sequences with motif4.62%
Number of Background Sequences with motif464.5
Percentage of Background Sequences with motif2.15%
Average Position of motif in Targets416.9 +/- 283.8bp
Average Position of motif in Background276.2 +/- 213.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CMTA3/MA0970.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-SCACTCGG
NNNACGCGG

CMTA2/MA0969.1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:SCACTCGG---
--ACGCGGNNN

z/dmmpmm(Down)/fly

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:SCACTCGG
-CACTCA-

YDR026C(MacIsaac)/Yeast

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:SCACTCGG
--ACCCGG

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--SCACTCGG
MRSCACTYAA

z/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:SCACTCGG
-CACTCA-

tin/MA0247.2/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:SCACTCGG--
CCACTTGANA

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----SCACTCGG---
NNTTTGCACACGGCCC

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-SCACTCGG-
NSCACTYVAV

z/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:SCACTCGG
-CACTCAA