Information for 13-CCCCCCYY (Motif 9)


Reverse Opposite:

p-value:1e-26
log p-value:-6.080e+01
Information Content per bp:1.533
Number of Target Sequences with motif663.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2521.1
Percentage of Background Sequences with motif10.99%
Average Position of motif in Targets426.8 +/- 311.2bp
Average Position of motif in Background251.1 +/- 196.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:CCCCCCYY
CCCCCCCC

SeqBias: polyC-repeat

Match Rank:2
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CCCCCCYY--
CCCCCCCCCC

ZNF740/MA0753.1/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CCCCCCYY--
CCCCCCCCAC

PB0100.1_Zfp740_1/Jaspar

Match Rank:4
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CCCCCCYY-----
CCCCCCCCCCCACTTG

TDA9/MA0431.1/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCYY
ACCCCGCAC

YGR067C/MA0425.1/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCYY-----
ACCCCACTTTTTCA

PB0097.1_Zfp281_1/Jaspar

Match Rank:7
Score:0.77
Offset:-7
Orientation:forward strand
Alignment:-------CCCCCCYY
TCCCCCCCCCCCCCC

MSN2/MA0341.1/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CCCCCCYY
CCCCT---

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCCCCCYY-
GCCCCGCCCC

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCCCCCYY-
GCCCCGCCCCC