Information for 5-TKCACGTG (Motif 4)


Reverse Opposite:

p-value:1e-48
log p-value:-1.113e+02
Information Content per bp:1.887
Number of Target Sequences with motif423.0
Percentage of Target Sequences with motif10.64%
Number of Background Sequences with motif1118.7
Percentage of Background Sequences with motif4.88%
Average Position of motif in Targets361.1 +/- 256.9bp
Average Position of motif in Background249.8 +/- 196.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

UNE10/MA1074.1/Jaspar

Match Rank:1
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:TKCACGTG-
-GCACGTGG

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.94
Offset:1
Orientation:forward strand
Alignment:TKCACGTG---
-KCACGTGMCN

PHYPADRAFT_143875/MA0988.1/Jaspar

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TKCACGTG--
CGCACGTGCG

CBF1/CBF1_SM/72-CBF1(Harbison)/Yeast

Match Rank:4
Score:0.94
Offset:1
Orientation:forward strand
Alignment:TKCACGTG
-TCACGTG

Arnt/MA0004.1/Jaspar

Match Rank:5
Score:0.94
Offset:2
Orientation:forward strand
Alignment:TKCACGTG
--CACGTG

BIM2/MA0965.1/Jaspar

Match Rank:6
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TKCACGTG--
GGCACGTGCC

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:TKCACGTG--
--CACGTGNC

PHYPADRAFT_48267/MA1021.1/Jaspar

Match Rank:8
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:TKCACGTG-
-GCACGTGG

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.94
Offset:1
Orientation:forward strand
Alignment:TKCACGTG-
-GCACGTGT

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:TKCACGTG--
--CACGTGDC