Information for 3-CGCGCGGC (Motif 2)


Reverse Opposite:

p-value:1e-92
log p-value:-2.129e+02
Information Content per bp:1.547
Number of Target Sequences with motif1378.0
Percentage of Target Sequences with motif34.65%
Number of Background Sequences with motif4733.4
Percentage of Background Sequences with motif20.64%
Average Position of motif in Targets406.0 +/- 304.0bp
Average Position of motif in Background252.6 +/- 219.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.69
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGCGG-

RSC30/MA0375.1/Jaspar

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:CGCGCGGC
CGCGCGCG

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:3
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGGC
TAGCGCGC---

SUT1(MacIsaac)/Yeast

Match Rank:4
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

SUT1/MA0399.1/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CGCGCGGC
CGCGGGG-

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC
GGCACGTGCC

MBP1/MA0329.1/Jaspar

Match Rank:7
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGC
NNCGCGT---

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGC----
GCCGCGCAGTGCGT

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.74
Offset:-7
Orientation:reverse strand
Alignment:-------CGCGCGGC-
NCANGCGCGCGCGCCA

SUT1?/SacCer-Promoters/Homer

Match Rank:10
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGCGCGGC-
-GCGCGGGG