Information for 25-GGGTTCGA (Motif 15)


Reverse Opposite:

p-value:1e-13
log p-value:-3.034e+01
Information Content per bp:1.895
Number of Target Sequences with motif203.0
Percentage of Target Sequences with motif5.10%
Number of Background Sequences with motif669.1
Percentage of Background Sequences with motif2.92%
Average Position of motif in Targets301.2 +/- 263.5bp
Average Position of motif in Background260.4 +/- 183.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GGGTTCGA
-GATTCGA

OPI1(MacIsaac)/Yeast

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
CGGTTCG-

OPI1/MA0349.1/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
CGGTTCG-

XBP1/MA0414.1/Jaspar

Match Rank:4
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GGGTTCGA-
--NCTCGAG

YER051W(MacIsaac)/Yeast

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GGGTTCGA-
---TTCGAA

lin-14/MA0261.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
GTGTTC--

MA0261.1_lin-14/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGTTCGA
GTGTTC--

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GGGTTCGA----
CTCCAGGGGTCAATTGA

SNF1(MacIsaac)/Yeast

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTCGA-------
CCGGGTTCGATCCCCGG

ct/MA0218.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGTTCGA
--GTTCAA