Information for 24-AAGGGCCC (Motif 14)


Reverse Opposite:

p-value:1e-14
log p-value:-3.406e+01
Information Content per bp:1.929
Number of Target Sequences with motif186.0
Percentage of Target Sequences with motif4.68%
Number of Background Sequences with motif571.3
Percentage of Background Sequences with motif2.49%
Average Position of motif in Targets292.8 +/- 218.1bp
Average Position of motif in Background261.0 +/- 182.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NRG1/NRG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:AAGGGCCC
-AGGGTCC

NRG1(MacIsaac)/Yeast

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AAGGGCCC
-AGGGTCC

NRG1/MA0347.1/Jaspar

Match Rank:3
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------AAGGGCCC------
CTAGATCAGGGTCCATCGCA

OsI_08196/MA1050.1/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AAGGGCCC--
--GGGCCCAC

OJ1581_H09.2/MA1031.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAGGGCCC--
GTGGGCCCAC

TCP23/MA1066.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AAGGGCCC--
--GGGCCCAC

TCP15/MA1062.1/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AAGGGCCC--
--GGGCCCAC

MSN2(MacIsaac)/Yeast

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAGGGCCC
AAGGGGC-

PCF5(TCP)/Oryza sativa/AthaMap

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAGGGCCC--
NNGGGACCAC

TCP20/MA1065.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AAGGGCCC----
--GGGCCCACCA