Information for 17-TCGCCTTA (Motif 10)


Reverse Opposite:

p-value:1e-18
log p-value:-4.282e+01
Information Content per bp:1.743
Number of Target Sequences with motif588.0
Percentage of Target Sequences with motif14.79%
Number of Background Sequences with motif2349.8
Percentage of Background Sequences with motif10.24%
Average Position of motif in Targets385.8 +/- 321.3bp
Average Position of motif in Background252.2 +/- 176.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCGCCTTA---
NNGCTTTANNN

DOF5.6/MA0983.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TCGCCTTA--
--NCTTTTNN

PHYPADRAFT_38837/MA1022.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCGCCTTA--
NNNCTTTTNN

PHYPADRAFT_153324/MA0989.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCGCCTTA--
-NNCTTTTNN

TRB2/MA1073.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCGCCTTA-
-TGCCCTAA

DOF2.5/MA0977.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCGCCTTA-
-CACTTTTT

CDF3/MA0974.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCGCCTTA-
NCACTTTTT

DOF1.8/MA0981.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCGCCTTA--
NNNCTTTTNN

TBF1/MA0403.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCGCCTTA-
-AACCCTAA

PHYPADRAFT_140773/MA0987.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCGCCTTA--
NNNCTTTNNN