Information for 13-CCTWCCCT (Motif 9)


Reverse Opposite:

p-value:1e-29
log p-value:-6.678e+01
Information Content per bp:1.567
Number of Target Sequences with motif716.0
Percentage of Target Sequences with motif16.46%
Number of Background Sequences with motif2349.6
Percentage of Background Sequences with motif10.80%
Average Position of motif in Targets417.9 +/- 337.4bp
Average Position of motif in Background267.8 +/- 196.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---CCTWCCCT-
KGCCCTTCCCCA

MSN2/MSN2_H2O2Hi/1-MSN2(Harbison)/Yeast

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCTWCCCT-
CCGCCCCTT

RGM1/MA0366.1/Jaspar

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CCTWCCCT
---CCCCT

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCTWCCCT
GCCCCGCCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCTWCCCT
CCCCCCCC-

MSN4/MA0342.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CCTWCCCT
---CCCCT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCTWCCCT----
ATCCCCGCCCCTAAAA

P(MYB)/Zea mays/AthaMap

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCTWCCCT
ACCTACCCG

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCTWCCCT-
GCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCTWCCCT--
NAGCCCCGCCCCCN