Information for 8-GKCACGTG (Motif 5)


Reverse Opposite:

p-value:1e-40
log p-value:-9.274e+01
Information Content per bp:1.684
Number of Target Sequences with motif209.0
Percentage of Target Sequences with motif4.81%
Number of Background Sequences with motif356.0
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets404.5 +/- 308.8bp
Average Position of motif in Background287.1 +/- 230.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GKCACGTG
GGCACGTG

BHLHE40/MA0464.2/Jaspar

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GKCACGTG--
GTCACGTGAN

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-GKCACGTG-
NGKCACGTGM

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GKCACGTG
GNCACGTG

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GKCACGTG
GHCACGTG

TFE3/MA0831.1/Jaspar

Match Rank:6
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GKCACGTG--
GTCACGTGNT

HEY1/MA0823.1/Jaspar

Match Rank:7
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GKCACGTG--
GGCACGTGTC

MNT/MA0825.1/Jaspar

Match Rank:8
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GKCACGTG--
NGCACGTGNT

BIM2/MA0965.1/Jaspar

Match Rank:9
Score:0.92
Offset:0
Orientation:forward strand
Alignment:GKCACGTG--
GGCACGTGCC

CBF1(MacIsaac)/Yeast

Match Rank:10
Score:0.92
Offset:0
Orientation:forward strand
Alignment:GKCACGTG
GTCACGTG