Information for 3-GCGCGCGG (Motif 3)


Reverse Opposite:

p-value:1e-70
log p-value:-1.624e+02
Information Content per bp:1.592
Number of Target Sequences with motif1131.0
Percentage of Target Sequences with motif26.01%
Number of Background Sequences with motif3367.8
Percentage of Background Sequences with motif15.48%
Average Position of motif in Targets461.0 +/- 342.7bp
Average Position of motif in Background275.7 +/- 232.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.46
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC30/MA0375.1/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GCGCGCGG
CGCGCGCG-

SUT1?/SacCer-Promoters/Homer

Match Rank:2
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GCGCGCGG
GCGCGGGG

RSC3/MA0374.1/Jaspar

Match Rank:3
Score:0.84
Offset:1
Orientation:forward strand
Alignment:GCGCGCGG
-CGCGCGG

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:4
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GCGCGCGG
TAGCGCGC--

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.80
Offset:-6
Orientation:forward strand
Alignment:------GCGCGCGG-
ATAAAGGCGCGCGAT

SeqBias: CG-repeat

Match Rank:6
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GCGCGCGG
CGCGCGCGCG-

SUT1(MacIsaac)/Yeast

Match Rank:7
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GCGCGCGG
-CGCGGGG

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------GCGCGCGG--
NCANGCGCGCGCGCCA

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.78
Offset:-6
Orientation:forward strand
Alignment:------GCGCGCGG-
ATAAGGGCGCGCGAT

SUT1/MA0399.1/Jaspar

Match Rank:10
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GCGCGCGG
-CGCGGGG