Information for 25-TGGCCGAG (Motif 15)


Reverse Opposite:

p-value:1e-15
log p-value:-3.507e+01
Information Content per bp:1.530
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif163.8
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets314.9 +/- 262.4bp
Average Position of motif in Background294.5 +/- 166.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZAP1(WRKY(Zn))/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGAG
TTGACCGAG

SKN7/MA0381.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCGAG
NTGGCC---

RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGAG
TCGGCCGA-

ARO80/MA0273.1/Jaspar

Match Rank:4
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------TGGCCGAG-------
NNNNANTTNCCGAGANNTNNC

ZAP1/MA0589.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGAG--
TTGACCGAGCC

IME1/MA0320.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGGCCGAG
CCGCCGAG

CHA4/MA0283.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGGCCGAG-
-GGCGGAGA

RDS1/MA0361.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGGCCGAG
CGGCCGA-

IME1(MacIsaac)/Yeast

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGGCCGAG
CCGCCGAG

RDS1(MacIsaac)/Yeast

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGGCCGAG
CGGCCG--