Information for 19-CCCATACA (Motif 12)


Reverse Opposite:

p-value:1e-20
log p-value:-4.807e+01
Information Content per bp:1.889
Number of Target Sequences with motif399.0
Percentage of Target Sequences with motif9.17%
Number of Background Sequences with motif1214.7
Percentage of Background Sequences with motif5.58%
Average Position of motif in Targets377.5 +/- 262.5bp
Average Position of motif in Background264.4 +/- 195.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RAP1/MA0359.1/Jaspar

Match Rank:1
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CCCATACA
CACCCATACA

SFP1(MacIsaac)/Yeast

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA-
ACCCGTACAT

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:3
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CCCATACA-
ACCCGTACAT

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--CCCATACA
CACCCGTACA

RAP1(MacIsaac)/Yeast

Match Rank:5
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---CCCATACA-
ACACCCATACAC

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:6
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CCCATACA-
CACCCGTACAT

FHL1(MacIsaac)/Yeast

Match Rank:7
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA-
ATCCGTACAT

sma-4/MA0925.1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA--
NNCCAGACANN

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCCATACA
-CCGTACN

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCCATACA
TTCCCCCTAC-