| HOMER correlation |
HOMER motif name |
HOMER motif PWM |
ENCODE correlation |
ENCODE motif name |
ENCODE motif PWM |
CISBP correlation |
CISBP motif name |
CISBP motif PWM |
| 0.8 |
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer |
 |
0.83 |
>RFX3_4Rfx3_jolma_DBD_M244
|
 |
0.84 |
RFX3 |
 |
| 0.79 |
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer |
 |
0.81 |
>PKNOX2_3Pknox2_jolma_DBD_M173
|
 |
0.83 |
M6077_1.02.txt |
 |
| 0.79 |
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer |
 |
0.81 |
>ZNF713_1ZNF713_jolma_full_M747
|
 |
0.81 |
M6062_1.02.txt |
 |
| 0.78 |
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer |
 |
0.81 |
>RFX5_known9RFX5_2RFX5_jolma_DBD_M241
|
 |
0.81 |
ZNF713 |
 |
| 0.75 |
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer |
 |
0.81 |
>RFX2_1RFX2_jolma_DBD_M234
|
 |
0.81 |
RFX5 |
 |
| 0.75 |
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer |
 |
0.81 |
>PKNOX2_2PKNOX2_jolma_DBD_M172
|
 |
0.81 |
RFX5 |
|
| 0.74 |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer |
 |
0.81 |
>MEIS2_1MEIS2_jolma_DBD_M163
|
 |
0.81 |
M5021_1.02.txt |
 |
| 0.73 |
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer |
 |
0.81 |
>PKNOX1_2PKNOX1_jolma_DBD_M171
|
 |
0.81 |
RFX2 |
 |
| 0.73 |
YY1(Zf)/Promoter/Homer |
 |
0.81 |
>RFX5_known8RFX5_1RFX5_jolma_DBD_M240
|
 |
0.81 |
PKNOX2 |
 |
| 0.72 |
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer |
 |
0.8 |
>TGIF1_3TGIF1_jolma_DBD_M174
|
 |
0.81 |
MEIS2 |
 |
