Forward Reverse Complement
HOMER correlation HOMER motif name HOMER motif PWM ENCODE correlation ENCODE motif name ENCODE motif PWM CISBP correlation CISBP motif name CISBP motif PWM
0.83 X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer 0.86 >RFX3_4Rfx3_jolma_DBD_M244 0.86 RFX3
0.81 RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer 0.84 >RFX5_known9RFX5_2RFX5_jolma_DBD_M241 0.86 M6077_1.02.txt
0.81 Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer 0.84 >RFX2_1RFX2_jolma_DBD_M234 0.84 RFX5
0.81 Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer 0.84 >RFX5_known8RFX5_1RFX5_jolma_DBD_M240 0.84 RFX5
0.77 NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer 0.83 >MYC_disc4 MAX_H1-hESC_encode-Snyder_seq_hsa_r1:MDscan#2#Intergenic 0.84 RFX2
0.77 ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer 0.82 >NFATC1_3NFATC1_jolma_full_M188 0.84 RFX5
0.74 NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer 0.81 >RFX2_3Rfx2_jolma_DBD_M242 0.82 NFATC1
0.74 NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer 0.81 >SREBP_disc1 SREBF1_HepG2_encode-Snyder_seq_hsa_insulin_r1:MEME#2#Intergenic 0.82 RFX2
0.72 PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer 0.8 >MXI1_disc1 MXI1_K562_encode-Snyder_seq_hsa_IgG-rab-bHLH_r1:MEME#3#Intergenic 0.81 M6075_1.02.txt
0.72 YY1(Zf)/Promoter/Homer 0.8 >RFX3_2RFX3_jolma_DBD_M236 0.81 M2308_1.02.txt