******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/YJM789--MAC1/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:81846-82360 1.0000 100 chrI:138927-139347 1.0000 100 chrI:142147-143644 1.0000 100 chrI:166174-166914 1.0000 100 chrI:169683-170699 1.0000 100 chrII:9469-10497 1.0000 100 chrII:36231-36569 1.0000 100 chrII:44942-45361 1.0000 100 chrII:60694-61628 1.0000 100 chrII:87935-88586 1.0000 100 chrII:88946-90420 1.0000 100 chrII:165109-165446 1.0000 100 chrII:167896-169563 1.0000 100 chrII:181285-181645 1.0000 100 chrII:197167-197837 1.0000 100 chrII:226974-227354 1.0000 100 chrII:255104-255693 1.0000 100 chrII:266209-266765 1.0000 100 chrII:311180-311561 1.0000 100 chrII:326467-327151 1.0000 100 chrII:332247-333040 1.0000 100 chrII:347401-347977 1.0000 100 chrII:350596-351049 1.0000 100 chrII:405655-406320 1.0000 100 chrII:413748-416326 1.0000 100 chrII:477026-477773 1.0000 100 chrII:592865-593291 1.0000 100 chrII:604096-607105 1.0000 100 chrII:644952-645429 1.0000 100 chrII:800115-800693 1.0000 100 chrIII:126-1614 1.0000 100 chrIII:8490-9121 1.0000 100 chrIII:58442-58993 1.0000 100 chrIII:90785-91104 1.0000 100 chrIII:107191-107823 1.0000 100 chrIII:123383-123803 1.0000 100 chrIII:127528-127889 1.0000 100 chrIII:142169-143336 1.0000 100 chrIII:149722-150209 1.0000 100 chrIII:151048-151573 1.0000 100 chrIII:162516-164160 1.0000 100 chrIII:168034-168545 1.0000 100 chrIII:177161-178779 1.0000 100 chrIII:227732-228224 1.0000 100 chrIII:295343-295913 1.0000 100 chrIII:308601-308968 1.0000 100 chrIV:83325-83843 1.0000 100 chrIV:117146-118208 1.0000 100 chrIV:125308-126297 1.0000 100 chrIV:129220-131471 1.0000 100 chrIV:133082-133621 1.0000 100 chrIV:217052-218070 1.0000 100 chrIV:221666-222374 1.0000 100 chrIV:229434-231844 1.0000 100 chrIV:234126-234496 1.0000 100 chrIV:307978-310103 1.0000 100 chrIV:321662-321965 1.0000 100 chrIV:340557-341702 1.0000 100 chrIV:358043-358428 1.0000 100 chrIV:359236-359794 1.0000 100 chrIV:396694-397359 1.0000 100 chrIV:397830-398805 1.0000 100 chrIV:410197-410456 1.0000 100 chrIV:411226-411691 1.0000 100 chrIV:411867-412035 1.0000 100 chrIV:434104-435123 1.0000 100 chrIV:437537-438174 1.0000 100 chrIV:465198-469581 1.0000 100 chrIV:488436-488983 1.0000 100 chrIV:489687-491286 1.0000 100 chrIV:519658-519962 1.0000 100 chrIV:520704-521177 1.0000 100 chrIV:538896-539260 1.0000 100 chrIV:541209-541946 1.0000 100 chrIV:555402-556505 1.0000 100 chrIV:568695-569553 1.0000 100 chrIV:578792-580812 1.0000 100 chrIV:619679-620230 1.0000 100 chrIV:667736-668581 1.0000 100 chrIV:802569-802835 1.0000 100 chrIV:835874-836360 1.0000 100 chrIV:884287-884646 1.0000 100 chrIV:945773-946747 1.0000 100 chrIV:992683-993416 1.0000 100 chrIV:1013473-1013973 1.0000 100 chrIV:1016954-1017625 1.0000 100 chrIV:1075297-1075765 1.0000 100 chrIV:1095132-1095681 1.0000 100 chrIV:1150680-1151173 1.0000 100 chrIV:1175589-1176065 1.0000 100 chrIV:1201527-1201973 1.0000 100 chrIV:1236393-1238477 1.0000 100 chrIV:1300837-1301347 1.0000 100 chrIV:1305414-1305876 1.0000 100 chrIV:1351968-1353101 1.0000 100 chrIV:1353748-1354066 1.0000 100 chrIV:1354266-1356000 1.0000 100 chrIV:1359420-1361322 1.0000 100 chrIV:1361496-1361764 1.0000 100 chrIV:1401284-1401941 1.0000 100 chrIV:1402142-1403420 1.0000 100 chrIV:1417268-1417875 1.0000 100 chrIV:1449780-1451228 1.0000 100 chrIV:1461431-1461834 1.0000 100 chrIX:68180-69552 1.0000 100 chrIX:98536-100122 1.0000 100 chrIX:174860-175204 1.0000 100 chrIX:183301-183718 1.0000 100 chrIX:197373-198065 1.0000 100 chrIX:210682-211049 1.0000 100 chrIX:248565-249266 1.0000 100 chrIX:254188-254566 1.0000 100 chrIX:257355-258088 1.0000 100 chrIX:299850-300519 1.0000 100 chrIX:315619-318281 1.0000 100 chrIX:324108-324836 1.0000 100 chrIX:325523-326068 1.0000 100 chrIX:336112-336819 1.0000 100 chrIX:363945-364491 1.0000 100 chrIX:370260-370595 1.0000 100 chrIX:393939-394520 1.0000 100 chrV:6195-6783 1.0000 100 chrV:53502-54254 1.0000 100 chrV:61072-62133 1.0000 100 chrV:69000-69368 1.0000 100 chrV:78017-79457 1.0000 100 chrV:85114-86795 1.0000 100 chrV:99884-100282 1.0000 100 chrV:117300-118314 1.0000 100 chrV:130979-131399 1.0000 100 chrV:135009-136071 1.0000 100 chrV:138486-139977 1.0000 100 chrV:140193-140913 1.0000 100 chrV:141088-141321 1.0000 100 chrV:152174-153985 1.0000 100 chrV:176895-177461 1.0000 100 chrV:235215-236956 1.0000 100 chrV:249719-250763 1.0000 100 chrV:270355-270676 1.0000 100 chrV:288121-288801 1.0000 100 chrV:305812-307430 1.0000 100 chrV:311737-312295 1.0000 100 chrV:354801-355401 1.0000 100 chrV:362117-362480 1.0000 100 chrV:396169-397981 1.0000 100 chrV:423073-423623 1.0000 100 chrV:431036-431952 1.0000 100 chrV:434402-435152 1.0000 100 chrV:435409-435936 1.0000 100 chrV:438397-438961 1.0000 100 chrV:441805-442708 1.0000 100 chrV:443057-443341 1.0000 100 chrV:460596-462090 1.0000 100 chrV:469248-469776 1.0000 100 chrV:485571-486550 1.0000 100 chrV:486716-487688 1.0000 100 chrV:550902-551601 1.0000 100 chrVI:4539-4758 1.0000 100 chrVI:64187-65388 1.0000 100 chrVI:95418-95907 1.0000 100 chrVI:101385-101722 1.0000 100 chrVI:131333-131616 1.0000 100 chrVI:137216-137755 1.0000 100 chrVI:157903-158503 1.0000 100 chrVI:162015-162393 1.0000 100 chrVI:167227-167702 1.0000 100 chrVI:180633-181712 1.0000 100 chrVI:190875-191755 1.0000 100 chrVI:210316-210902 1.0000 100 chrVI:221709-222137 1.0000 100 chrVI:222564-224165 1.0000 100 chrVI:226504-226973 1.0000 100 chrVI:263917-264661 1.0000 100 chrVII:110369-110783 1.0000 100 chrVII:115219-115728 1.0000 100 chrVII:121950-122837 1.0000 100 chrVII:148088-149576 1.0000 100 chrVII:185227-185927 1.0000 100 chrVII:205160-205750 1.0000 100 chrVII:254168-254731 1.0000 100 chrVII:277007-278722 1.0000 100 chrVII:287180-287697 1.0000 100 chrVII:310355-312497 1.0000 100 chrVII:316342-317419 1.0000 100 chrVII:319138-320070 1.0000 100 chrVII:328381-329289 1.0000 100 chrVII:345860-346648 1.0000 100 chrVII:364886-366718 1.0000 100 chrVII:371213-371496 1.0000 100 chrVII:405466-405898 1.0000 100 chrVII:412104-412580 1.0000 100 chrVII:422879-423484 1.0000 100 chrVII:438559-439873 1.0000 100 chrVII:440226-441278 1.0000 100 chrVII:531386-531803 1.0000 100 chrVII:533316-533607 1.0000 100 chrVII:533823-535190 1.0000 100 chrVII:541714-542176 1.0000 100 chrVII:544403-544902 1.0000 100 chrVII:555063-557557 1.0000 100 chrVII:561430-561715 1.0000 100 chrVII:648772-649353 1.0000 100 chrVII:661527-661949 1.0000 100 chrVII:700351-701160 1.0000 100 chrVII:706942-707188 1.0000 100 chrVII:726242-726799 1.0000 100 chrVII:730931-731415 1.0000 100 chrVII:736186-736979 1.0000 100 chrVII:738805-739493 1.0000 100 chrVII:766234-766495 1.0000 100 chrVII:774126-774638 1.0000 100 chrVII:779338-779760 1.0000 100 chrVII:787351-788721 1.0000 100 chrVII:794083-794557 1.0000 100 chrVII:823356-823696 1.0000 100 chrVII:828355-828987 1.0000 100 chrVII:844614-845989 1.0000 100 chrVII:856740-857017 1.0000 100 chrVII:857214-857676 1.0000 100 chrVII:876165-876734 1.0000 100 chrVII:878580-879107 1.0000 100 chrVII:882455-883947 1.0000 100 chrVII:930678-931147 1.0000 100 chrVII:1000355-1000605 1.0000 100 chrVII:1004020-1004402 1.0000 100 chrVIII:34412-35137 1.0000 100 chrVIII:62560-63001 1.0000 100 chrVIII:74898-75907 1.0000 100 chrVIII:103783-105490 1.0000 100 chrVIII:115828-116297 1.0000 100 chrVIII:125893-126327 1.0000 100 chrVIII:132824-133368 1.0000 100 chrVIII:134070-134821 1.0000 100 chrVIII:145900-146775 1.0000 100 chrVIII:148988-149238 1.0000 100 chrVIII:175031-175761 1.0000 100 chrVIII:237748-238081 1.0000 100 chrVIII:296704-297254 1.0000 100 chrVIII:358306-358795 1.0000 100 chrVIII:381476-383347 1.0000 100 chrVIII:388665-389200 1.0000 100 chrVIII:411012-411785 1.0000 100 chrVIII:451286-453159 1.0000 100 chrVIII:466908-467275 1.0000 100 chrVIII:467488-467708 1.0000 100 chrVIII:475507-475903 1.0000 100 chrVIII:505813-506240 1.0000 100 chrVIII:555726-556377 1.0000 100 chrVIII:556952-557170 1.0000 100 chrX:59011-59458 1.0000 100 chrX:73301-75058 1.0000 100 chrX:75304-76503 1.0000 100 chrX:90044-90442 1.0000 100 chrX:115779-116264 1.0000 100 chrX:139032-140344 1.0000 100 chrX:157440-157915 1.0000 100 chrX:160052-160273 1.0000 100 chrX:172752-173174 1.0000 100 chrX:196394-197522 1.0000 100 chrX:204480-205076 1.0000 100 chrX:233035-235314 1.0000 100 chrX:354163-354806 1.0000 100 chrX:355200-355914 1.0000 100 chrX:374175-374850 1.0000 100 chrX:377823-378582 1.0000 100 chrX:390922-391394 1.0000 100 chrX:391763-392111 1.0000 100 chrX:396050-396951 1.0000 100 chrX:414752-415218 1.0000 100 chrX:415717-416490 1.0000 100 chrX:422690-423300 1.0000 100 chrX:424292-424729 1.0000 100 chrX:517662-518122 1.0000 100 chrX:523859-524462 1.0000 100 chrX:531312-532342 1.0000 100 chrX:538524-539024 1.0000 100 chrX:540689-541797 1.0000 100 chrX:542747-543248 1.0000 100 chrX:545453-545758 1.0000 100 chrX:607673-609058 1.0000 100 chrX:617691-618143 1.0000 100 chrX:651132-651622 1.0000 100 chrX:663566-664353 1.0000 100 chrX:703233-703676 1.0000 100 chrX:745020-745530 1.0000 100 chrXI:774-1105 1.0000 100 chrXI:46719-47007 1.0000 100 chrXI:67795-68052 1.0000 100 chrXI:74431-74871 1.0000 100 chrXI:84011-84440 1.0000 100 chrXI:99754-99969 1.0000 100 chrXI:107468-108031 1.0000 100 chrXI:108230-110140 1.0000 100 chrXI:140778-141475 1.0000 100 chrXI:158224-159863 1.0000 100 chrXI:162432-162777 1.0000 100 chrXI:219497-220114 1.0000 100 chrXI:282802-284454 1.0000 100 chrXI:302682-303234 1.0000 100 chrXI:307961-308454 1.0000 100 chrXI:312413-313992 1.0000 100 chrXI:325863-327579 1.0000 100 chrXI:379439-379930 1.0000 100 chrXI:382197-382474 1.0000 100 chrXI:430782-431646 1.0000 100 chrXI:457910-459215 1.0000 100 chrXI:490767-491352 1.0000 100 chrXI:513206-513512 1.0000 100 chrXI:517786-518173 1.0000 100 chrXI:551739-552408 1.0000 100 chrXI:578743-579299 1.0000 100 chrXI:618755-619378 1.0000 100 chrXI:644887-645952 1.0000 100 chrXI:666604-666774 1.0000 100 chrXII:48698-49179 1.0000 100 chrXII:92415-92723 1.0000 100 chrXII:108585-109017 1.0000 100 chrXII:167704-168269 1.0000 100 chrXII:168480-168755 1.0000 100 chrXII:198306-199709 1.0000 100 chrXII:214692-215062 1.0000 100 chrXII:232030-234221 1.0000 100 chrXII:241616-242020 1.0000 100 chrXII:261671-263955 1.0000 100 chrXII:282598-283839 1.0000 100 chrXII:366022-366601 1.0000 100 chrXII:370571-370947 1.0000 100 chrXII:374198-374811 1.0000 100 chrXII:424170-424494 1.0000 100 chrXII:426912-427516 1.0000 100 chrXII:448505-449001 1.0000 100 chrXII:459592-460165 1.0000 100 chrXII:460346-460745 1.0000 100 chrXII:497839-499860 1.0000 100 chrXII:521697-522448 1.0000 100 chrXII:546314-547574 1.0000 100 chrXII:566912-570640 1.0000 100 chrXII:592317-592717 1.0000 100 chrXII:605180-605615 1.0000 100 chrXII:628150-629150 1.0000 100 chrXII:656832-657188 1.0000 100 chrXII:673513-674660 1.0000 100 chrXII:713132-713618 1.0000 100 chrXII:732010-732297 1.0000 100 chrXII:734597-734974 1.0000 100 chrXII:780824-781222 1.0000 100 chrXII:781441-781890 1.0000 100 chrXII:783931-784523 1.0000 100 chrXII:793734-795365 1.0000 100 chrXII:796280-797433 1.0000 100 chrXII:805406-806833 1.0000 100 chrXII:818506-820319 1.0000 100 chrXII:837842-839414 1.0000 100 chrXII:875190-876399 1.0000 100 chrXII:897205-899784 1.0000 100 chrXII:921716-922574 1.0000 100 chrXII:932061-932556 1.0000 100 chrXII:937505-941184 1.0000 100 chrXII:947177-949630 1.0000 100 chrXII:951061-954276 1.0000 100 chrXII:962841-963304 1.0000 100 chrXII:975802-976099 1.0000 100 chrXII:1017801-1019630 1.0000 100 chrXII:1028177-1028600 1.0000 100 chrXII:1028798-1029767 1.0000 100 chrXII:1051917-1052215 1.0000 100 chrXIII:91379-92099 1.0000 100 chrXIII:131610-132107 1.0000 100 chrXIII:145863-146300 1.0000 100 chrXIII:161958-164366 1.0000 100 chrXIII:168685-169021 1.0000 100 chrXIII:195927-196301 1.0000 100 chrXIII:224060-224750 1.0000 100 chrXIII:225324-226681 1.0000 100 chrXIII:258995-259470 1.0000 100 chrXIII:290507-291160 1.0000 100 chrXIII:296226-298917 1.0000 100 chrXIII:302863-303216 1.0000 100 chrXIII:320979-321450 1.0000 100 chrXIII:352075-352625 1.0000 100 chrXIII:362949-363753 1.0000 100 chrXIII:372181-372760 1.0000 100 chrXIII:378870-379617 1.0000 100 chrXIII:420327-420792 1.0000 100 chrXIII:463427-463862 1.0000 100 chrXIII:480411-480873 1.0000 100 chrXIII:504661-505220 1.0000 100 chrXIII:510853-511647 1.0000 100 chrXIII:551039-551815 1.0000 100 chrXIII:552144-552331 1.0000 100 chrXIII:552504-553178 1.0000 100 chrXIII:572607-573209 1.0000 100 chrXIII:586314-586902 1.0000 100 chrXIII:650813-651873 1.0000 100 chrXIII:673250-674743 1.0000 100 chrXIII:731453-733472 1.0000 100 chrXIII:747541-748153 1.0000 100 chrXIII:748528-748891 1.0000 100 chrXIII:753040-755152 1.0000 100 chrXIII:768177-768419 1.0000 100 chrXIII:808060-808522 1.0000 100 chrXIII:837708-838226 1.0000 100 chrXIII:861170-861417 1.0000 100 chrXIII:892882-895273 1.0000 100 chrXIII:914345-915764 1.0000 100 chrXIV:61949-64564 1.0000 100 chrXIV:88906-90070 1.0000 100 chrXIV:96001-96464 1.0000 100 chrXIV:102578-103546 1.0000 100 chrXIV:104585-105639 1.0000 100 chrXIV:241370-241797 1.0000 100 chrXIV:330552-332418 1.0000 100 chrXIV:374649-375110 1.0000 100 chrXIV:442861-444788 1.0000 100 chrXIV:493899-495779 1.0000 100 chrXIV:499165-500748 1.0000 100 chrXIV:546562-547712 1.0000 100 chrXIV:560483-560787 1.0000 100 chrXIV:568056-568504 1.0000 100 chrXIV:569571-570047 1.0000 100 chrXIV:576694-577532 1.0000 100 chrXIV:585497-586587 1.0000 100 chrXIV:602063-602591 1.0000 100 chrXIV:631479-632007 1.0000 100 chrXIV:632500-632909 1.0000 100 chrXIV:725900-726358 1.0000 100 chrXIV:783737-784316 1.0000 100 chrXV:39999-40699 1.0000 100 chrXV:79734-80158 1.0000 100 chrXV:92780-94795 1.0000 100 chrXV:109561-110648 1.0000 100 chrXV:110861-111195 1.0000 100 chrXV:113578-113883 1.0000 100 chrXV:159251-160744 1.0000 100 chrXV:161112-161752 1.0000 100 chrXV:167958-168469 1.0000 100 chrXV:216277-216688 1.0000 100 chrXV:226454-226884 1.0000 100 chrXV:228080-228583 1.0000 100 chrXV:253816-254083 1.0000 100 chrXV:274477-275002 1.0000 100 chrXV:281797-282608 1.0000 100 chrXV:288073-288401 1.0000 100 chrXV:300857-301648 1.0000 100 chrXV:340139-340750 1.0000 100 chrXV:353902-354328 1.0000 100 chrXV:424267-424624 1.0000 100 chrXV:438421-439409 1.0000 100 chrXV:444658-446265 1.0000 100 chrXV:464275-464807 1.0000 100 chrXV:504914-505530 1.0000 100 chrXV:571465-572154 1.0000 100 chrXV:594315-594634 1.0000 100 chrXV:622566-623362 1.0000 100 chrXV:639205-639450 1.0000 100 chrXV:663501-664790 1.0000 100 chrXV:677736-679652 1.0000 100 chrXV:710072-710562 1.0000 100 chrXV:779694-780998 1.0000 100 chrXV:853993-854795 1.0000 100 chrXV:866540-867934 1.0000 100 chrXV:899911-901231 1.0000 100 chrXV:946232-948663 1.0000 100 chrXV:968110-968547 1.0000 100 chrXV:976387-976703 1.0000 100 chrXV:978795-979162 1.0000 100 chrXV:979738-981059 1.0000 100 chrXV:1003965-1004701 1.0000 100 chrXV:1025685-1026056 1.0000 100 chrXV:1027882-1029448 1.0000 100 chrXVI:55847-56348 1.0000 100 chrXVI:75275-76778 1.0000 100 chrXVI:172532-174113 1.0000 100 chrXVI:188356-189211 1.0000 100 chrXVI:194145-194607 1.0000 100 chrXVI:208179-210465 1.0000 100 chrXVI:214562-216178 1.0000 100 chrXVI:252094-253071 1.0000 100 chrXVI:280586-282960 1.0000 100 chrXVI:302589-305016 1.0000 100 chrXVI:338684-339274 1.0000 100 chrXVI:378651-379010 1.0000 100 chrXVI:404532-407800 1.0000 100 chrXVI:435127-436200 1.0000 100 chrXVI:520004-520544 1.0000 100 chrXVI:559967-560462 1.0000 100 chrXVI:571888-572527 1.0000 100 chrXVI:581826-582438 1.0000 100 chrXVI:586561-586940 1.0000 100 chrXVI:622305-622867 1.0000 100 chrXVI:689377-689898 1.0000 100 chrXVI:699891-700706 1.0000 100 chrXVI:731625-732622 1.0000 100 chrXVI:744077-744599 1.0000 100 chrXVI:768400-769479 1.0000 100 chrXVI:775611-776142 1.0000 100 chrXVI:783849-788855 1.0000 100 chrXVI:794457-796148 1.0000 100 chrXVI:810586-810907 1.0000 100 chrXVI:819325-821324 1.0000 100 chrXVI:860124-860701 1.0000 100 chrXVI:880006-880554 1.0000 100 chrXVI:911292-912066 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/YJM789--MAC1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/YJM789--MAC1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/YJM789--MAC1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 503 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 50300 N= 503 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.305 C 0.195 G 0.195 T 0.305 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/YJM789--MAC1/background): A 0.312 C 0.188 G 0.188 T 0.312 ******************************************************************************** ******************************************************************************** MOTIF BGGGRATCGAACCCVBGACCTYMNGMTTR MEME-1 width = 29 sites = 65 llr = 1326 E-value = 3.0e-275 ******************************************************************************** -------------------------------------------------------------------------------- Motif BGGGRATCGAACCCVBGACCTYMNGMTTR MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::3:55:::aa:1:3:27:::143:5115 pos.-specific C 331::1:8:::a6742::772543331:1 probability G 476a52::a:::133581:2111272123 matrix T 3:1::2a2::::3::3:2317422::771 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 * * ** * * Relative 1.4 * * ****** * * * Entropy 1.2 * * ****** * * * (29.4 bits) 1.0 * ** ****** * * ** * 0.7 ***** ******** ** ** * 0.5 ***** **************** **** 0.2 *********************** ***** 0.0 ----------------------------- Multilevel GGGGGATCGAACCCCGGACCTCCAGATTA consensus CCA AG T TGAT T CTACCC GG sequence T GC T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BGGGRATCGAACCCVBGACCTYMNGMTTR MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXVI:581826-582438 - 15 2.00e-12 AAGCCCTGTA GGGGGCTCGAACCCCTAACCTTATGATTA AGAGTCATAC chrXIII:480411-480873 + 38 2.00e-12 AAGCCCTGTA GGGGGCTCGAACCCCTAACCTTATGATTA AGAGTCATAC chrX:414752-415218 - 66 2.00e-12 CCTGTA GGGGGCTCGAACCCCTAACCTTATGATTA AGAGTCATAC chrVII:876165-876734 - 30 2.00e-12 AAGCCCTGTA GGGGGCTCGAACCCCTAACCTTATGATTA AGAGTCATAC chrVI:226504-226973 + 9 2.00e-12 GCCCTGTA GGGGGCTCGAACCCCTAACCTTATGATTA AGAGTCATAC chrIII:151048-151573 + 33 2.00e-12 AAGCCCTGTA GGGGGCTCGAACCCCTAACCTTATGATTA AGAGTCATAC chrXIV:602063-602591 - 71 2.71e-12 A GCGGGATCGAACCGCTGATCCCCGCGTTA TTAGCACGGT chrXII:1051917-1052215 + 64 2.71e-12 ATGGTCTCTA GCGGGATCGAACCGCTGATCCCCGCGTTA TTAGCACG chrVII:738805-739493 - 59 2.71e-12 ATGGTCTCTA GCGGGATCGAACCGCTGATCCCCGCGTTA TTAGCACGGT chrV:443057-443341 + 62 2.71e-12 ATGGTCTCTA GCGGGATCGAACCGCTGATCCCCGCGTTA TTAGCACGGT chrXIII:290507-291160 - 52 7.46e-12 ACTCCGATAC GGGGAGTCGAACCCCGGTCTCCACGGTGA AAGCGTGATG chrV:176895-177461 - 5 7.46e-12 ACTCCGATAC GGGGAGTCGAACCCCGGTCTCCACGGTGA AAGC chrII:644952-645429 - 61 7.46e-12 ACTCCGATAC GGGGAGTCGAACCCCGGTCTCCACGGTGA AAGCGTGATG chrXII:214692-215062 + 65 1.13e-11 ATGGACGCAA CCGGAATCGAACCGATGACCTCTTCCTTG CAAGGGA chrV:311737-312295 + 66 1.13e-11 TTGGACGCAA CCGGAATCGAACCGATGACCTCTTCCTTG CAAGGG chrXVI:860124-860701 - 50 1.68e-11 CTGCGCAAGC CCGGAATCGAACCGGGGGCCCAACGATGG CAACGTTGGA chrXV:281797-282608 - 45 1.68e-11 ATGCGCAAGC CCGGAATCGAACCGGGGGCCCAACGATGG CAACGTTGGA chrXV:226454-226884 + 1 1.68e-11 . CCGGAATCGAACCGGGGGCCCAACGATGG CAACGTTGGA chrIV:83325-83843 - 47 1.68e-11 TTGCGCAAGC CCGGAATCGAACCGGGGGCCCAACGATGG CAACGTTGGA chrIII:142169-143336 + 8 1.68e-11 CGCAAGC CCGGAATCGAACCGGGGGCCCAACGATGG CAACGTTGGA chrXIII:131610-132107 + 26 1.91e-11 GCACTCACGA TGGGGGTCGAACCCATAATCTTCTGATTA GAAGTCAGAC chrX:374175-374850 + 53 1.91e-11 GCACTCACGA TGGGGGTCGAACCCATAATCTTCTGATTA GAAGTCAGAC chrIII:123383-123803 + 43 2.17e-11 TGGGGCGAGC CGGGACTCGAACCCGGGACCTCCCGCACC CTAAGCGAGA chrVIII:475507-475903 + 60 2.80e-11 ATGTTCCAAC CGAGGATCGAACTCGGGACCTTTGCCGTG TGAAGGCAAC chrXIII:572607-573209 + 34 4.58e-11 GTGCTCCAGG GGAGGTTCGAACTCTCGACCTTCAGATTA TGAGACTGAC chrX:422690-423300 - 27 4.58e-11 GTGCTCCAGG GGAGGTTCGAACTCTCGACCTTCAGATTA TGAGACTGAC chrXV:464275-464807 - 23 5.16e-11 AGGGGCGAGC TGGGAATTGAACCCAGGGCCTCTCGCATG CTTTGTCTTC chrXIV:546562-547712 - 72 5.16e-11 . TGGGAATTGAACCCAGGGCCTCTCGCATG CTTTGTCTTC chrXIII:195927-196301 + 13 5.16e-11 AGGGGCGAGC TGGGAATTGAACCCAGGGCCTCTCGCATG CTTTGTCTTC chrVIII:388665-389200 + 20 5.16e-11 TGGGGCGAGC TGGGAATTGAACCCAGGGCCTCTCGCATG CTTTGTCTTC chrXVI:622305-622867 + 13 7.34e-11 ATGCGAATTC TGTGGATCGAACACAGGACCTCCAGATAA CTTGACCGAA chrXVI:559967-560462 + 43 7.34e-11 ATGCGAATTC TGTGGATCGAACACAGGACCTCCAGATAA CTTGACCGAA chrXIII:352075-352625 - 33 7.34e-11 ATGCGAATTC TGTGGATCGAACACAGGACCTCCAGATAA CTTGACCGAA chrVII:440226-441278 + 23 7.34e-11 ATGCGAATTC TGTGGATCGAACACAGGACCTCCAGATAA CTTGACCGAA chrII:326467-327151 + 42 7.34e-11 TTGATCCAAC CGAGGTTCGAACTCGGGATCTTCGCCGTG TAAAGGCGAC chrXIII:372181-372760 + 34 8.24e-11 ATGATTTCGC CCAGGATCGAACTGGGGACGTTCTGCGTG TTAAGCAGAT chrVII:823356-823696 - 42 8.24e-11 ATGATTTCGC CCAGGATCGAACTGGGGACGTTCTGCGTG TTAAGCAGAT chrVII:412104-412580 + 11 8.24e-11 TTGATTTCGC CCAGGATCGAACTGGGGACGTTCTGCGTG TTAAGCAGAT chrV:469248-469776 - 31 8.24e-11 ATGATTTCGC CCAGGATCGAACTGGGGACGTTCTGCGTG TTAAGCAGAT chrXV:288073-288401 - 56 1.79e-10 ATCTCCCGGG GGCGAGTCGAACGCCCGATCTCAAGATTT CGTAGTGATA chrXIII:837708-838226 - 62 1.79e-10 ATCTCCCGGG GGCGAGTCGAACGCCCGATCTCAAGATTT CGTAGTGGTA chrXIII:168685-169021 - 43 1.79e-10 ATCTCCCGGG GGCGAGTCGAACGCCCGATCTCAAGATTT CGTAGTGATA chrX:542747-543248 + 18 1.79e-10 ATCTCCCGGG GGCGAGTCGAACGCCCGATCTCAAGATTT CGTAGTGATA chrVI:210316-210902 + 69 1.79e-10 ATCTCCCGGG GGCGAGTCGAACGCCCGATCTCAAGATTT CGT chrIX:325523-326068 - 38 2.22e-10 TTGCTTCCAA TCGGATTTGAACCGATGATCTCCACATTA CTAGTGTGGC chrIV:1095132-1095681 + 23 3.70e-10 ATGCGAACTC TGTGGATCGAACACAGGACCTCCAGATAT CTTGACCAAA chrIV:884287-884646 - 40 3.70e-10 GTGCTCGAGG TGGGGTTTGAACCCACGACGGTCGCGTTG CTTTTAAAGG chrIII:168034-168545 + 71 4.09e-10 AAGGTCCTAC CCGGATTCGAACCGGGGTTGTCCGGATCA A chrXVI:810586-810907 - 16 4.98e-10 ACGACCCCAG TGAGGGTTGAACTCACGATCTTGCGATTA ACAGTCGCAC chrXI:74431-74871 - 59 4.98e-10 GCGACCCCAG TGAGGGTTGAACTCACGATCTTGCGATTA ACAGTCGCAC chrVII:730931-731415 - 50 4.98e-10 ACGACCCCAG TGAGGGTTGAACTCACGATCTTGCGATTA ACAGTCGCAC chrVI:137216-137755 + 60 4.98e-10 ACGACCCCAG TGAGGGTTGAACTCACGATCTTGCGATTA ACAGTCGCAC chrVII:774126-774638 - 52 6.05e-10 TTGGACGAGT CCGGAATCGAACCGGAGACCTCTCCCATG CTAAGGGAGC chrXIV:96001-96464 + 68 6.65e-10 TTGAGCGGTA CGAGAATCGAACCCGTGTCCCCACCTTGG AAGG chrXI:578743-579299 - 52 1.26e-09 ACTCCTCATA GGGGGCTCGAACCCCTGACATTTCGGTAT CCTTGCTTAA chrXIII:808060-808522 + 14 2.51e-09 AAGGTCCCAC CCGGATTCGAACTGGGGTTGTTCGGATCA GAACCGAAAG chrXVI:744077-744599 - 30 2.05e-08 TTGCCACCTG TCAGAATTGAACTAACGACCTTTGCATTA CAAGTGCAAC chrXII:426912-427516 - 2 2.63e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTGGCACGCGA C chrXI:513206-513512 + 32 2.63e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTGGCACGCGA CAAGCGCCCA chrX:204480-205076 - 41 2.63e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTGGCACGCGA CAAGCGCCCA chrII:405655-406320 - 57 2.63e-08 TCTCCGCGAC GGGGAATTGAACCCCGATCTGGCACGCGA CAAGCGCCCA chrIII:149722-150209 - 39 5.55e-08 ATAGCGCCGC TCGGTTTCGATCCGAGGACATCAGGGTTA TGAGCCCTGC chrXIV:725900-726358 + 64 9.32e-08 CTGAAGGATG CGAGGTTCGAACTCGCGCGGACAACCGTC CAACAGAT chrIV:519658-519962 - 29 9.32e-08 TTGAAGGATG CGAGGTTCGAACTCGCGCGGACAACCGTC CAACAGATCT chrII:347401-347977 - 10 9.32e-08 CTGAAGGATG CGAGGTTCGAACTCGCGCGGACAACCGTC CAACAGATC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BGGGRATCGAACCCVBGACCTYMNGMTTR MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:581826-582438 2e-12 14_[-1]_57 chrXIII:480411-480873 2e-12 37_[+1]_34 chrX:414752-415218 2e-12 65_[-1]_6 chrVII:876165-876734 2e-12 29_[-1]_42 chrVI:226504-226973 2e-12 8_[+1]_63 chrIII:151048-151573 2e-12 32_[+1]_39 chrXIV:602063-602591 2.7e-12 70_[-1]_1 chrXII:1051917-1052215 2.7e-12 63_[+1]_8 chrVII:738805-739493 2.7e-12 58_[-1]_13 chrV:443057-443341 2.7e-12 61_[+1]_10 chrXIII:290507-291160 7.5e-12 51_[-1]_20 chrV:176895-177461 7.5e-12 4_[-1]_67 chrII:644952-645429 7.5e-12 60_[-1]_11 chrXII:214692-215062 1.1e-11 64_[+1]_7 chrV:311737-312295 1.1e-11 65_[+1]_6 chrXVI:860124-860701 1.7e-11 49_[-1]_22 chrXV:281797-282608 1.7e-11 44_[-1]_27 chrXV:226454-226884 1.7e-11 [+1]_71 chrIV:83325-83843 1.7e-11 46_[-1]_25 chrIII:142169-143336 1.7e-11 7_[+1]_64 chrXIII:131610-132107 1.9e-11 25_[+1]_46 chrX:374175-374850 1.9e-11 52_[+1]_19 chrIII:123383-123803 2.2e-11 42_[+1]_29 chrVIII:475507-475903 2.8e-11 59_[+1]_12 chrXIII:572607-573209 4.6e-11 33_[+1]_38 chrX:422690-423300 4.6e-11 26_[-1]_45 chrXV:464275-464807 5.2e-11 22_[-1]_49 chrXIV:546562-547712 5.2e-11 71_[-1] chrXIII:195927-196301 5.2e-11 12_[+1]_59 chrVIII:388665-389200 5.2e-11 19_[+1]_52 chrXVI:622305-622867 7.3e-11 12_[+1]_59 chrXVI:559967-560462 7.3e-11 42_[+1]_29 chrXIII:352075-352625 7.3e-11 32_[-1]_39 chrVII:440226-441278 7.3e-11 22_[+1]_49 chrII:326467-327151 7.3e-11 41_[+1]_30 chrXIII:372181-372760 8.2e-11 33_[+1]_38 chrVII:823356-823696 8.2e-11 41_[-1]_30 chrVII:412104-412580 8.2e-11 10_[+1]_61 chrV:469248-469776 8.2e-11 30_[-1]_41 chrXV:288073-288401 1.8e-10 55_[-1]_16 chrXIII:837708-838226 1.8e-10 61_[-1]_10 chrXIII:168685-169021 1.8e-10 42_[-1]_29 chrX:542747-543248 1.8e-10 17_[+1]_54 chrVI:210316-210902 1.8e-10 68_[+1]_3 chrIX:325523-326068 2.2e-10 37_[-1]_34 chrIV:1095132-1095681 3.7e-10 22_[+1]_49 chrIV:884287-884646 3.7e-10 39_[-1]_32 chrIII:168034-168545 4.1e-10 70_[+1]_1 chrXVI:810586-810907 5e-10 15_[-1]_56 chrXI:74431-74871 5e-10 58_[-1]_13 chrVII:730931-731415 5e-10 49_[-1]_22 chrVI:137216-137755 5e-10 59_[+1]_12 chrVII:774126-774638 6e-10 51_[-1]_20 chrXIV:96001-96464 6.7e-10 67_[+1]_4 chrXI:578743-579299 1.3e-09 51_[-1]_20 chrXIII:808060-808522 2.5e-09 13_[+1]_58 chrXVI:744077-744599 2e-08 29_[-1]_42 chrXII:426912-427516 2.6e-08 1_[-1]_70 chrXI:513206-513512 2.6e-08 31_[+1]_40 chrX:204480-205076 2.6e-08 40_[-1]_31 chrII:405655-406320 2.6e-08 56_[-1]_15 chrIII:149722-150209 5.5e-08 38_[-1]_33 chrXIV:725900-726358 9.3e-08 63_[+1]_8 chrIV:519658-519962 9.3e-08 28_[-1]_43 chrII:347401-347977 9.3e-08 9_[-1]_62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BGGGRATCGAACCCVBGACCTYMNGMTTR MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BGGGRATCGAACCCVBGACCTYMNGMTTR width=29 seqs=65 chrXVI:581826-582438 ( 15) GGGGGCTCGAACCCCTAACCTTATGATTA 1 chrXIII:480411-480873 ( 38) GGGGGCTCGAACCCCTAACCTTATGATTA 1 chrX:414752-415218 ( 66) GGGGGCTCGAACCCCTAACCTTATGATTA 1 chrVII:876165-876734 ( 30) GGGGGCTCGAACCCCTAACCTTATGATTA 1 chrVI:226504-226973 ( 9) GGGGGCTCGAACCCCTAACCTTATGATTA 1 chrIII:151048-151573 ( 33) GGGGGCTCGAACCCCTAACCTTATGATTA 1 chrXIV:602063-602591 ( 71) GCGGGATCGAACCGCTGATCCCCGCGTTA 1 chrXII:1051917-1052215 ( 64) GCGGGATCGAACCGCTGATCCCCGCGTTA 1 chrVII:738805-739493 ( 59) GCGGGATCGAACCGCTGATCCCCGCGTTA 1 chrV:443057-443341 ( 62) GCGGGATCGAACCGCTGATCCCCGCGTTA 1 chrXIII:290507-291160 ( 52) GGGGAGTCGAACCCCGGTCTCCACGGTGA 1 chrV:176895-177461 ( 5) GGGGAGTCGAACCCCGGTCTCCACGGTGA 1 chrII:644952-645429 ( 61) GGGGAGTCGAACCCCGGTCTCCACGGTGA 1 chrXII:214692-215062 ( 65) CCGGAATCGAACCGATGACCTCTTCCTTG 1 chrV:311737-312295 ( 66) CCGGAATCGAACCGATGACCTCTTCCTTG 1 chrXVI:860124-860701 ( 50) CCGGAATCGAACCGGGGGCCCAACGATGG 1 chrXV:281797-282608 ( 45) CCGGAATCGAACCGGGGGCCCAACGATGG 1 chrXV:226454-226884 ( 1) CCGGAATCGAACCGGGGGCCCAACGATGG 1 chrIV:83325-83843 ( 47) CCGGAATCGAACCGGGGGCCCAACGATGG 1 chrIII:142169-143336 ( 8) CCGGAATCGAACCGGGGGCCCAACGATGG 1 chrXIII:131610-132107 ( 26) TGGGGGTCGAACCCATAATCTTCTGATTA 1 chrX:374175-374850 ( 53) TGGGGGTCGAACCCATAATCTTCTGATTA 1 chrIII:123383-123803 ( 43) CGGGACTCGAACCCGGGACCTCCCGCACC 1 chrVIII:475507-475903 ( 60) CGAGGATCGAACTCGGGACCTTTGCCGTG 1 chrXIII:572607-573209 ( 34) GGAGGTTCGAACTCTCGACCTTCAGATTA 1 chrX:422690-423300 ( 27) GGAGGTTCGAACTCTCGACCTTCAGATTA 1 chrXV:464275-464807 ( 23) TGGGAATTGAACCCAGGGCCTCTCGCATG 1 chrXIV:546562-547712 ( 72) TGGGAATTGAACCCAGGGCCTCTCGCATG 1 chrXIII:195927-196301 ( 13) TGGGAATTGAACCCAGGGCCTCTCGCATG 1 chrVIII:388665-389200 ( 20) TGGGAATTGAACCCAGGGCCTCTCGCATG 1 chrXVI:622305-622867 ( 13) TGTGGATCGAACACAGGACCTCCAGATAA 1 chrXVI:559967-560462 ( 43) TGTGGATCGAACACAGGACCTCCAGATAA 1 chrXIII:352075-352625 ( 33) TGTGGATCGAACACAGGACCTCCAGATAA 1 chrVII:440226-441278 ( 23) TGTGGATCGAACACAGGACCTCCAGATAA 1 chrII:326467-327151 ( 42) CGAGGTTCGAACTCGGGATCTTCGCCGTG 1 chrXIII:372181-372760 ( 34) CCAGGATCGAACTGGGGACGTTCTGCGTG 1 chrVII:823356-823696 ( 42) CCAGGATCGAACTGGGGACGTTCTGCGTG 1 chrVII:412104-412580 ( 11) CCAGGATCGAACTGGGGACGTTCTGCGTG 1 chrV:469248-469776 ( 31) CCAGGATCGAACTGGGGACGTTCTGCGTG 1 chrXV:288073-288401 ( 56) GGCGAGTCGAACGCCCGATCTCAAGATTT 1 chrXIII:837708-838226 ( 62) GGCGAGTCGAACGCCCGATCTCAAGATTT 1 chrXIII:168685-169021 ( 43) GGCGAGTCGAACGCCCGATCTCAAGATTT 1 chrX:542747-543248 ( 18) GGCGAGTCGAACGCCCGATCTCAAGATTT 1 chrVI:210316-210902 ( 69) GGCGAGTCGAACGCCCGATCTCAAGATTT 1 chrIX:325523-326068 ( 38) TCGGATTTGAACCGATGATCTCCACATTA 1 chrIV:1095132-1095681 ( 23) TGTGGATCGAACACAGGACCTCCAGATAT 1 chrIV:884287-884646 ( 40) TGGGGTTTGAACCCACGACGGTCGCGTTG 1 chrIII:168034-168545 ( 71) CCGGATTCGAACCGGGGTTGTCCGGATCA 1 chrXVI:810586-810907 ( 16) TGAGGGTTGAACTCACGATCTTGCGATTA 1 chrXI:74431-74871 ( 59) TGAGGGTTGAACTCACGATCTTGCGATTA 1 chrVII:730931-731415 ( 50) TGAGGGTTGAACTCACGATCTTGCGATTA 1 chrVI:137216-137755 ( 60) TGAGGGTTGAACTCACGATCTTGCGATTA 1 chrVII:774126-774638 ( 52) CCGGAATCGAACCGGAGACCTCTCCCATG 1 chrXIV:96001-96464 ( 68) CGAGAATCGAACCCGTGTCCCCACCTTGG 1 chrXI:578743-579299 ( 52) GGGGGCTCGAACCCCTGACATTTCGGTAT 1 chrXIII:808060-808522 ( 14) CCGGATTCGAACTGGGGTTGTTCGGATCA 1 chrXVI:744077-744599 ( 30) TCAGAATTGAACTAACGACCTTTGCATTA 1 chrXII:426912-427516 ( 2) GGGGAATTGAACCCCGATCTGGCACGCGA 1 chrXI:513206-513512 ( 32) GGGGAATTGAACCCCGATCTGGCACGCGA 1 chrX:204480-205076 ( 41) GGGGAATTGAACCCCGATCTGGCACGCGA 1 chrII:405655-406320 ( 57) GGGGAATTGAACCCCGATCTGGCACGCGA 1 chrIII:149722-150209 ( 39) TCGGTTTCGATCCGAGGACATCAGGGTTA 1 chrXIV:725900-726358 ( 64) CGAGGTTCGAACTCGCGCGGACAACCGTC 1 chrIV:519658-519962 ( 29) CGAGGTTCGAACTCGCGCGGACAACCGTC 1 chrII:347401-347977 ( 10) CGAGGTTCGAACTCGCGCGGACAACCGTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BGGGRATCGAACCCVBGACCTYMNGMTTR MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 36216 bayes= 9.87227 E= 3.0e-275 -1267 78 103 -9 -1267 78 185 -1267 -25 -129 164 -202 -1267 -1267 241 -1267 56 -1267 148 -434 66 -61 20 -88 -1267 -1267 -1267 168 -1267 203 -1267 -44 -1267 -1267 241 -1267 168 -1267 -1267 -1267 166 -1267 -1267 -434 -1267 241 -1267 -1267 -202 164 -129 -25 -434 185 71 -1267 5 91 64 -334 -434 39 134 -25 -76 -1267 212 -1267 108 -203 -44 -102 -1267 181 -203 -9 -334 191 -29 -153 -276 9 -129 112 -202 139 -161 24 24 114 -161 -102 -2 71 -15 -53 -1267 71 188 -1267 70 48 20 -434 -176 -161 -44 118 -176 -203 9 108 75 -161 71 -153 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BGGGRATCGAACCCVBGACCTYMNGMTTR MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 65 E= 3.0e-275 0.000000 0.323077 0.384615 0.292308 0.000000 0.323077 0.676923 0.000000 0.261538 0.076923 0.584615 0.076923 0.000000 0.000000 1.000000 0.000000 0.461538 0.000000 0.523077 0.015385 0.492308 0.123077 0.215385 0.169231 0.000000 0.000000 0.000000 1.000000 0.000000 0.769231 0.000000 0.230769 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.984615 0.000000 0.000000 0.015385 0.000000 1.000000 0.000000 0.000000 0.076923 0.584615 0.076923 0.261538 0.015385 0.676923 0.307692 0.000000 0.323077 0.353846 0.292308 0.030769 0.015385 0.246154 0.476923 0.261538 0.184615 0.000000 0.815385 0.000000 0.661538 0.046154 0.138462 0.153846 0.000000 0.661538 0.046154 0.292308 0.030769 0.707692 0.153846 0.107692 0.046154 0.200000 0.076923 0.676923 0.076923 0.492308 0.061538 0.369231 0.369231 0.415385 0.061538 0.153846 0.307692 0.307692 0.169231 0.215385 0.000000 0.307692 0.692308 0.000000 0.507692 0.261538 0.215385 0.015385 0.092308 0.061538 0.138462 0.707692 0.092308 0.046154 0.200000 0.661538 0.523077 0.061538 0.307692 0.107692 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BGGGRATCGAACCCVBGACCTYMNGMTTR MEME-1 regular expression -------------------------------------------------------------------------------- [GCT][GC][GA]G[GA][AG]T[CT]GAAC[CT][CG][CAG][GTC]GA[CT]C[TC][CT][CA][ACT][GC][ACG]T[TG][AG] -------------------------------------------------------------------------------- Time 241.42 secs. ******************************************************************************** ******************************************************************************** MOTIF GSBYNBDTGGCYYAGTKGKTWRAGSSNNCG MEME-2 width = 30 sites = 73 llr = 1303 E-value = 4.9e-237 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSBYNBDTGGCYYAGTKGKTWRAGSSNNCG MEME-2 Description -------------------------------------------------------------------------------- Simplified A :1:1212:3:::2a2::::26562::3221 pos.-specific C 144323::::753:::2::2::2:542362 probability G 8532234:7a:22:8:5a51:427452215 matrix T 1134334a::334::a3:564111112311 bits 2.4 * * 2.2 * * 1.9 * * 1.7 * * * ** * Relative 1.4 * * * *** * Entropy 1.2 * **** *** * (25.7 bits) 1.0 * **** *** ** *** 0.7 ** ***** *** ** * *** * 0.5 *** ****** ****** ** *** ** 0.2 **** ******* ************* ** 0.0 ------------------------------ Multilevel GGCTTCTTGGCCTAGTGGGTAAAGCGACCG consensus CTCCTG A TTC T T TG GCCTAC sequence G GGA C GG A TA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGCYYAGTKGKTWRAGSSNNCG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrXIV:602063-602591 + 35 1.36e-13 AGATAACAAT GGTCTCTTGGCCCAGTTGGTTAAGGCACCG TGCTAATAAC chrXII:734597-734974 + 67 1.36e-13 AACAAAGTTT GGTCTCTTGGCCCAGTTGGTTAAGGCACCG TGCT chrVII:738805-739493 + 23 1.36e-13 GAAAAAAATA GGTCTCTTGGCCCAGTTGGTTAAGGCACCG TGCTAATAAC chrIX:183301-183718 - 25 1.36e-13 ACAAATTCCT GGTCTCTTGGCCCAGTTGGTTAAGGCACCG TGCTAATAAC chrII:197167-197837 + 42 1.36e-13 CAGTAATCAA GGTCTCTTGGCCCAGTTGGTTAAGGCACCG TGCTAATAAC chrXIII:320979-321450 - 26 4.58e-12 AATACAAATC GGGCGTGTGGCGTAGTCGGTAGCGCGCTCC CTTAGCATGG chrXII:656832-657188 - 17 4.58e-12 CAAGAAAATT GGGCGTGTGGCGTAGTCGGTAGCGCGCTCC CTTAGCATGG chrXI:517786-518173 + 59 4.58e-12 TATCTACTAT GGGCGTGTGGCGTAGTCGGTAGCGCGCTCC CTTAGCATGG chrVII:774126-774638 + 17 4.58e-12 TCAATTAATT GGGCGTGTGGCGTAGTCGGTAGCGCGCTCC CTTAGCATGG chrIII:227732-228224 + 14 1.12e-10 AAATCGAAAT GGCACTATGGCCGAGTGGTTAAGGCGAGAG ACTCGAATGG chrXIII:258995-259470 - 28 1.48e-10 AAGTTAGTAT GGCAACTTGGCCGAGTGGTTAAGGCGAAAG ATTAGAAATC chrXII:167704-168269 - 60 1.48e-10 ATAGTCATAT GGCAACTTGGCCGAGTGGTTAAGGCGAAAG ATTAGAAATC chrVIII:132824-133368 - 32 1.48e-10 TATAATAAGT GGCAACTTGGCCGAGTGGTTAAGGCGAAAG ATTAGAAATC chrIV:1305414-1305876 + 35 1.48e-10 TACAAATTAA GGCAACTTGGCCGAGTGGTTAAGGCGAAAG ATTAGAAATC chrX:617691-618143 + 52 1.70e-10 AACAAACAAT GGGAGTTTGGCCGAGTGGTTTAAGGCGTCA GATTTAGGTG chrXV:353902-354328 - 19 2.54e-10 ACGGTTTACT GCTTCTATGGCCAAGTTGGTAAGGCGCCAC ACTAGTAATG chrIX:325523-326068 + 3 2.54e-10 GA GCTTCTATGGCCAAGTTGGTAAGGCGCCAC ACTAGTAATG chrIX:174860-175204 + 49 2.54e-10 ACAAGTACGA GCTTCTATGGCCAAGTTGGTAAGGCGCCAC ACTAGTAATG chrVII:115219-115728 + 65 2.90e-10 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTAGAGCGTTCG GCTTTT chrXIV:374649-375110 + 40 3.75e-10 AGAAAAATAA GCGGACTTAGCTCAGTTGGGAGAGCGCCAG ACTGAAGAAA chrXII:962841-963304 - 4 6.20e-10 TATTATCGAC GGAGGGTTGGCCGAGTGGTCTAAGGCGGCA GAC chrXI:84011-84440 + 33 6.20e-10 AAATTTGTAT GGAGGGTTGGCCGAGTGGTCTAAGGCGGCA GACTTAAGAT chrX:424292-424729 - 26 6.20e-10 TAAATAAGAT GGAGGGTTGGCCGAGTGGTCTAAGGCGGCA GACTTAAGAT chrXVI:622305-622867 - 66 7.00e-10 GATAT GCGGATTTAGCTCAGTTGGGAGAGCGCCAG ACTGAAGAAA chrXIII:372181-372760 - 69 7.00e-10 CT GGTTTCGTGGTCTAGTCGGTTATGGCATCT GCTTAACACG chrXI:379439-379930 + 46 7.00e-10 CAGATTAATA GGTTTCGTGGTCTAGTCGGTTATGGCATCT GCTTAACACG chrXI:307961-308454 - 31 7.00e-10 ACAATTAAGT GGTTTCGTGGTCTAGTCGGTTATGGCATCT GCTTAACACG chrVIII:358306-358795 - 40 7.00e-10 CAAATAGTAA GCGGATTTAGCTCAGTTGGGAGAGCGCCAG ACTGAAGAAA chrVIII:237748-238081 - 46 7.00e-10 CAAATAGTAA GCGGATTTAGCTCAGTTGGGAGAGCGCCAG ACTGAAGAAA chrVII:823356-823696 + 6 7.00e-10 AGAGT GGTTTCGTGGTCTAGTCGGTTATGGCATCT GCTTAACACG chrVII:412104-412580 - 46 7.00e-10 TCAAAAAACT GGTTTCGTGGTCTAGTCGGTTATGGCATCT GCTTAACACG chrV:438397-438961 + 71 7.00e-10 CAACAAATTA GGTTTCGTGGTCTAGTCGGTTATGGCATCT chrII:36231-36569 + 48 7.00e-10 TTAGTTGTAA GCGGATTTAGCTCAGTTGGGAGAGCGCCAG ACTGAAGAAA chrXIII:504661-505220 + 5 1.00e-09 AAGT GGTTGTTTGGCCGAGCGGTCTAAGGCGCCT GATTCAAGAA chrXI:457910-459215 + 45 1.00e-09 ACAAATAAGT GGTTGTTTGGCCGAGCGGTCTAAGGCGCCT GATTCAAGAA chrVII:857214-857676 - 67 1.00e-09 AAGT GGTTGTTTGGCCGAGCGGTCTAAGGCGCCT GATTCAAGAA chrIV:1150680-1151173 - 36 1.13e-09 AAGTGTTTCA GTCCCAGTGGCCGAGTGGTTAAGGCGATGC CTGCTATTTC chrXV:228080-228583 + 50 2.48e-09 TAAAATATTA GACTCCATGGCCAAGTTGGTTAAGGCGTGC GACTGTTAAT chrXI:74431-74871 + 23 2.48e-09 ATAGCAATTA GACTCCATGGCCAAGTTGGTTAAGGCGTGC GACTGTTAAT chrVII:730931-731415 + 14 2.48e-09 TAGTCAAAAA GACTCCATGGCCAAGTTGGTTAAGGCGTGC GACTGTTAAT chrIII:127528-127889 + 58 2.48e-09 AAGATAAAAT GACTCCATGGCCAAGTTGGTTAAGGCGTGC GACTGTTAAT chrX:414752-415218 + 31 2.76e-09 CAACGAATTA GCCTTGTTGGCGCAATCGGTAGCGCGTATG ACTCTTAATC chrVI:226504-226973 - 43 2.76e-09 AGATTAAAAT GCCTTGTTGGCGCAATCGGTAGCGCGTATG ACTCTTAATC chrIV:1351968-1353101 - 25 2.76e-09 CAACGAAATA GCCTTGTTGGCGCAATCGGTAGCGCGTATG ACTCTTAATC chrIV:1201527-1201973 + 50 2.76e-09 CAAATAAATA GCCTTGTTGGCGCAATCGGTAGCGCGTATG ACTCTTAATC chrIII:151048-151573 - 67 2.76e-09 AAGA GCCTTGTTGGCGCAATCGGTAGCGCGTATG ACTCTTAATC chrXVI:860124-860701 + 17 3.42e-09 TAAATAACAA GCGCAAGTGGTTTAGTGGTAAAATCCAACG TTGCCATCGT chrXV:281797-282608 + 12 3.42e-09 ACATGAAAGC GCGCAAGTGGTTTAGTGGTAAAATCCAACG TTGCCATCGT chrXV:226454-226884 - 33 3.42e-09 AAGAAATTCA GCGCAAGTGGTTTAGTGGTAAAATCCAACG TTGCCATCGT chrX:531312-532342 + 51 3.42e-09 CAATTAGTGA GCGCAAGTGGTTTAGTGGTAAAATCCAACG TTGCCATCGT chrIV:83325-83843 + 14 3.42e-09 AGTTCACTTA GCGCAAGTGGTTTAGTGGTAAAATCCAACG TTGCCATCGT chrIII:142169-143336 - 40 3.42e-09 AAGATTACTA GCGCAAGTGGTTTAGTGGTAAAATCCAACG TTGCCATCGT chrXII:605180-605615 - 56 5.17e-09 TTTCGAAAAT GCTCGTGTAGCTCAGTGGTTAGAGCTTCGT GCTTATAGCA chrXIII:572607-573209 - 68 8.47e-09 ACA GCTTCAGTAGCTCAGTAGGAAGAGCGTCAG TCTCATAATC chrIV:1175589-1176065 + 52 8.47e-09 ACAAAACAAA GCTTCAGTAGCTCAGTAGGAAGAGCGTCAG TCTCATAATC chrXIV:546562-547712 + 7 9.33e-09 ATAATC GGGCGTGTGGTCTAGTGGTATGATTCTCGC TTTGGGCGAC chrXII:92415-92723 + 29 9.33e-09 AAGTTAATAA GGGCGTGTGGTCTAGTGGTATGATTCTCGC TTTGGGCGAC chrI:138927-139347 + 65 9.33e-09 CAATTAGTAC GGGCGTGTGGTCTAGTGGTATGATTCTCGC TTTGGG chrXV:110861-111195 - 26 6.17e-08 CAATTAACCC GGGCGGTTAGTGTAGTGGTTATCATCCCAC CCTTCCAAGG chrXIII:808060-808522 - 47 1.11e-07 AGAAGAAAAA GGTCCTATAGTGTAGTGGTTATCACTTTCG GTTCTGATCC chrII:350596-351049 + 55 1.47e-07 TCAATAAAAG GGTTTTATAGTGTAGTGGTTATCACTTTCG GTTTTGATCC chrXV:288073-288401 + 5 1.57e-07 GCTT CTCTCGGTAGCCAAGTTGGTTTAAGGCGCA AGACTGTAAT chrXIII:837708-838226 + 11 1.57e-07 AGTTAATTGA CTCTCGGTAGCCAAGTTGGTTTAAGGCGCA AGACTGTAAT chrX:542747-543248 - 68 1.57e-07 ATA CTCTCGGTAGCCAAGTTGGTTTAAGGCGCA AGACTGTAAT chrVI:167227-167702 + 23 1.57e-07 ACAAAAACGA CTCTCGGTAGCCAAGTTGGTTTAAGGCGCA AGACTGTAAT chrXI:513206-513512 - 65 2.05e-07 TAACGT TCCGTGATAGTTTAATGGTCAGAATGGGCG CTTGTCGCGT chrX:374175-374850 - 4 2.05e-07 CTTTGTTTCT TCCGTGATAGTTTAATGGTCAGAATGGGCG CTT chrX:204480-205076 + 7 2.05e-07 TAAAAA TCCGTGATAGTTTAATGGTCAGAATGGGCG CTTGTCGCGT chrVII:544403-544902 - 17 2.05e-07 AGATATTTCT TCCGTGATAGTTTAATGGTCAGAATGGGCG CTTGTCGCGT chrVII:531386-531803 + 66 2.05e-07 TCGAGTTACT TCCGTGATAGTTTAATGGTCAGAATGGGCG CTTGT chrII:405655-406320 + 23 2.05e-07 CTTTGTTTCT TCCGTGATAGTTTAATGGTCAGAATGGGCG CTTGTCGCGT chrVII:1004020-1004402 + 55 4.50e-07 TCAAGGGTTT GCCTCCTTAGCTTAGTGGTAGAGCGTTGCA CTTGTAATGC chrVII:661527-661949 + 61 4.50e-07 GTAAAAATTT GCCTCCTTAGCTTAGTGGTAGAGCGTTGCA CTTGTAATGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGCYYAGTKGKTWRAGSSNNCG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:602063-602591 1.4e-13 34_[+2]_36 chrXII:734597-734974 1.4e-13 66_[+2]_4 chrVII:738805-739493 1.4e-13 22_[+2]_48 chrIX:183301-183718 1.4e-13 24_[-2]_46 chrII:197167-197837 1.4e-13 41_[+2]_29 chrXIII:320979-321450 4.6e-12 25_[-2]_45 chrXII:656832-657188 4.6e-12 16_[-2]_54 chrXI:517786-518173 4.6e-12 58_[+2]_12 chrVII:774126-774638 4.6e-12 16_[+2]_54 chrIII:227732-228224 1.1e-10 13_[+2]_57 chrXIII:258995-259470 1.5e-10 27_[-2]_43 chrXII:167704-168269 1.5e-10 59_[-2]_11 chrVIII:132824-133368 1.5e-10 31_[-2]_39 chrIV:1305414-1305876 1.5e-10 34_[+2]_36 chrX:617691-618143 1.7e-10 51_[+2]_19 chrXV:353902-354328 2.5e-10 18_[-2]_52 chrIX:325523-326068 2.5e-10 2_[+2]_68 chrIX:174860-175204 2.5e-10 48_[+2]_22 chrVII:115219-115728 2.9e-10 64_[+2]_6 chrXIV:374649-375110 3.8e-10 39_[+2]_31 chrXII:962841-963304 6.2e-10 3_[-2]_67 chrXI:84011-84440 6.2e-10 32_[+2]_38 chrX:424292-424729 6.2e-10 25_[-2]_45 chrXVI:622305-622867 7e-10 65_[-2]_5 chrXIII:372181-372760 7e-10 68_[-2]_2 chrXI:379439-379930 7e-10 45_[+2]_25 chrXI:307961-308454 7e-10 30_[-2]_40 chrVIII:358306-358795 7e-10 39_[-2]_31 chrVIII:237748-238081 7e-10 45_[-2]_25 chrVII:823356-823696 7e-10 5_[+2]_65 chrVII:412104-412580 7e-10 45_[-2]_25 chrV:438397-438961 7e-10 70_[+2] chrII:36231-36569 7e-10 47_[+2]_23 chrXIII:504661-505220 1e-09 4_[+2]_66 chrXI:457910-459215 1e-09 44_[+2]_26 chrVII:857214-857676 1e-09 66_[-2]_4 chrIV:1150680-1151173 1.1e-09 35_[-2]_35 chrXV:228080-228583 2.5e-09 49_[+2]_21 chrXI:74431-74871 2.5e-09 22_[+2]_48 chrVII:730931-731415 2.5e-09 13_[+2]_57 chrIII:127528-127889 2.5e-09 57_[+2]_13 chrX:414752-415218 2.8e-09 30_[+2]_40 chrVI:226504-226973 2.8e-09 42_[-2]_28 chrIV:1351968-1353101 2.8e-09 24_[-2]_46 chrIV:1201527-1201973 2.8e-09 49_[+2]_21 chrIII:151048-151573 2.8e-09 66_[-2]_4 chrXVI:860124-860701 3.4e-09 16_[+2]_54 chrXV:281797-282608 3.4e-09 11_[+2]_59 chrXV:226454-226884 3.4e-09 32_[-2]_38 chrX:531312-532342 3.4e-09 50_[+2]_20 chrIV:83325-83843 3.4e-09 13_[+2]_57 chrIII:142169-143336 3.4e-09 39_[-2]_31 chrXII:605180-605615 5.2e-09 55_[-2]_15 chrXIII:572607-573209 8.5e-09 67_[-2]_3 chrIV:1175589-1176065 8.5e-09 51_[+2]_19 chrXIV:546562-547712 9.3e-09 6_[+2]_64 chrXII:92415-92723 9.3e-09 28_[+2]_42 chrI:138927-139347 9.3e-09 64_[+2]_6 chrXV:110861-111195 6.2e-08 25_[-2]_45 chrXIII:808060-808522 1.1e-07 46_[-2]_24 chrII:350596-351049 1.5e-07 54_[+2]_16 chrXV:288073-288401 1.6e-07 4_[+2]_66 chrXIII:837708-838226 1.6e-07 10_[+2]_60 chrX:542747-543248 1.6e-07 67_[-2]_3 chrVI:167227-167702 1.6e-07 22_[+2]_48 chrXI:513206-513512 2.1e-07 64_[-2]_6 chrX:374175-374850 2.1e-07 3_[-2]_67 chrX:204480-205076 2.1e-07 6_[+2]_64 chrVII:544403-544902 2.1e-07 16_[-2]_54 chrVII:531386-531803 2.1e-07 65_[+2]_5 chrII:405655-406320 2.1e-07 22_[+2]_48 chrVII:1004020-1004402 4.5e-07 54_[+2]_16 chrVII:661527-661949 4.5e-07 60_[+2]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGCYYAGTKGKTWRAGSSNNCG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSBYNBDTGGCYYAGTKGKTWRAGSSNNCG width=30 seqs=73 chrXIV:602063-602591 ( 35) GGTCTCTTGGCCCAGTTGGTTAAGGCACCG 1 chrXII:734597-734974 ( 67) GGTCTCTTGGCCCAGTTGGTTAAGGCACCG 1 chrVII:738805-739493 ( 23) GGTCTCTTGGCCCAGTTGGTTAAGGCACCG 1 chrIX:183301-183718 ( 25) GGTCTCTTGGCCCAGTTGGTTAAGGCACCG 1 chrII:197167-197837 ( 42) GGTCTCTTGGCCCAGTTGGTTAAGGCACCG 1 chrXIII:320979-321450 ( 26) GGGCGTGTGGCGTAGTCGGTAGCGCGCTCC 1 chrXII:656832-657188 ( 17) GGGCGTGTGGCGTAGTCGGTAGCGCGCTCC 1 chrXI:517786-518173 ( 59) GGGCGTGTGGCGTAGTCGGTAGCGCGCTCC 1 chrVII:774126-774638 ( 17) GGGCGTGTGGCGTAGTCGGTAGCGCGCTCC 1 chrIII:227732-228224 ( 14) GGCACTATGGCCGAGTGGTTAAGGCGAGAG 1 chrXIII:258995-259470 ( 28) GGCAACTTGGCCGAGTGGTTAAGGCGAAAG 1 chrXII:167704-168269 ( 60) GGCAACTTGGCCGAGTGGTTAAGGCGAAAG 1 chrVIII:132824-133368 ( 32) GGCAACTTGGCCGAGTGGTTAAGGCGAAAG 1 chrIV:1305414-1305876 ( 35) GGCAACTTGGCCGAGTGGTTAAGGCGAAAG 1 chrX:617691-618143 ( 52) GGGAGTTTGGCCGAGTGGTTTAAGGCGTCA 1 chrXV:353902-354328 ( 19) GCTTCTATGGCCAAGTTGGTAAGGCGCCAC 1 chrIX:325523-326068 ( 3) GCTTCTATGGCCAAGTTGGTAAGGCGCCAC 1 chrIX:174860-175204 ( 49) GCTTCTATGGCCAAGTTGGTAAGGCGCCAC 1 chrVII:115219-115728 ( 65) TCCTTGTTAGCTCAGTTGGTAGAGCGTTCG 1 chrXIV:374649-375110 ( 40) GCGGACTTAGCTCAGTTGGGAGAGCGCCAG 1 chrXII:962841-963304 ( 4) GGAGGGTTGGCCGAGTGGTCTAAGGCGGCA 1 chrXI:84011-84440 ( 33) GGAGGGTTGGCCGAGTGGTCTAAGGCGGCA 1 chrX:424292-424729 ( 26) GGAGGGTTGGCCGAGTGGTCTAAGGCGGCA 1 chrXVI:622305-622867 ( 66) GCGGATTTAGCTCAGTTGGGAGAGCGCCAG 1 chrXIII:372181-372760 ( 69) GGTTTCGTGGTCTAGTCGGTTATGGCATCT 1 chrXI:379439-379930 ( 46) GGTTTCGTGGTCTAGTCGGTTATGGCATCT 1 chrXI:307961-308454 ( 31) GGTTTCGTGGTCTAGTCGGTTATGGCATCT 1 chrVIII:358306-358795 ( 40) GCGGATTTAGCTCAGTTGGGAGAGCGCCAG 1 chrVIII:237748-238081 ( 46) GCGGATTTAGCTCAGTTGGGAGAGCGCCAG 1 chrVII:823356-823696 ( 6) GGTTTCGTGGTCTAGTCGGTTATGGCATCT 1 chrVII:412104-412580 ( 46) GGTTTCGTGGTCTAGTCGGTTATGGCATCT 1 chrV:438397-438961 ( 71) GGTTTCGTGGTCTAGTCGGTTATGGCATCT 1 chrII:36231-36569 ( 48) GCGGATTTAGCTCAGTTGGGAGAGCGCCAG 1 chrXIII:504661-505220 ( 5) GGTTGTTTGGCCGAGCGGTCTAAGGCGCCT 1 chrXI:457910-459215 ( 45) GGTTGTTTGGCCGAGCGGTCTAAGGCGCCT 1 chrVII:857214-857676 ( 67) GGTTGTTTGGCCGAGCGGTCTAAGGCGCCT 1 chrIV:1150680-1151173 ( 36) GTCCCAGTGGCCGAGTGGTTAAGGCGATGC 1 chrXV:228080-228583 ( 50) GACTCCATGGCCAAGTTGGTTAAGGCGTGC 1 chrXI:74431-74871 ( 23) GACTCCATGGCCAAGTTGGTTAAGGCGTGC 1 chrVII:730931-731415 ( 14) GACTCCATGGCCAAGTTGGTTAAGGCGTGC 1 chrIII:127528-127889 ( 58) GACTCCATGGCCAAGTTGGTTAAGGCGTGC 1 chrX:414752-415218 ( 31) GCCTTGTTGGCGCAATCGGTAGCGCGTATG 1 chrVI:226504-226973 ( 43) GCCTTGTTGGCGCAATCGGTAGCGCGTATG 1 chrIV:1351968-1353101 ( 25) GCCTTGTTGGCGCAATCGGTAGCGCGTATG 1 chrIV:1201527-1201973 ( 50) GCCTTGTTGGCGCAATCGGTAGCGCGTATG 1 chrIII:151048-151573 ( 67) GCCTTGTTGGCGCAATCGGTAGCGCGTATG 1 chrXVI:860124-860701 ( 17) GCGCAAGTGGTTTAGTGGTAAAATCCAACG 1 chrXV:281797-282608 ( 12) GCGCAAGTGGTTTAGTGGTAAAATCCAACG 1 chrXV:226454-226884 ( 33) GCGCAAGTGGTTTAGTGGTAAAATCCAACG 1 chrX:531312-532342 ( 51) GCGCAAGTGGTTTAGTGGTAAAATCCAACG 1 chrIV:83325-83843 ( 14) GCGCAAGTGGTTTAGTGGTAAAATCCAACG 1 chrIII:142169-143336 ( 40) GCGCAAGTGGTTTAGTGGTAAAATCCAACG 1 chrXII:605180-605615 ( 56) GCTCGTGTAGCTCAGTGGTTAGAGCTTCGT 1 chrXIII:572607-573209 ( 68) GCTTCAGTAGCTCAGTAGGAAGAGCGTCAG 1 chrIV:1175589-1176065 ( 52) GCTTCAGTAGCTCAGTAGGAAGAGCGTCAG 1 chrXIV:546562-547712 ( 7) GGGCGTGTGGTCTAGTGGTATGATTCTCGC 1 chrXII:92415-92723 ( 29) GGGCGTGTGGTCTAGTGGTATGATTCTCGC 1 chrI:138927-139347 ( 65) GGGCGTGTGGTCTAGTGGTATGATTCTCGC 1 chrXV:110861-111195 ( 26) GGGCGGTTAGTGTAGTGGTTATCATCCCAC 1 chrXIII:808060-808522 ( 47) GGTCCTATAGTGTAGTGGTTATCACTTTCG 1 chrII:350596-351049 ( 55) GGTTTTATAGTGTAGTGGTTATCACTTTCG 1 chrXV:288073-288401 ( 5) CTCTCGGTAGCCAAGTTGGTTTAAGGCGCA 1 chrXIII:837708-838226 ( 11) CTCTCGGTAGCCAAGTTGGTTTAAGGCGCA 1 chrX:542747-543248 ( 68) CTCTCGGTAGCCAAGTTGGTTTAAGGCGCA 1 chrVI:167227-167702 ( 23) CTCTCGGTAGCCAAGTTGGTTTAAGGCGCA 1 chrXI:513206-513512 ( 65) TCCGTGATAGTTTAATGGTCAGAATGGGCG 1 chrX:374175-374850 ( 4) TCCGTGATAGTTTAATGGTCAGAATGGGCG 1 chrX:204480-205076 ( 7) TCCGTGATAGTTTAATGGTCAGAATGGGCG 1 chrVII:544403-544902 ( 17) TCCGTGATAGTTTAATGGTCAGAATGGGCG 1 chrVII:531386-531803 ( 66) TCCGTGATAGTTTAATGGTCAGAATGGGCG 1 chrII:405655-406320 ( 23) TCCGTGATAGTTTAATGGTCAGAATGGGCG 1 chrVII:1004020-1004402 ( 55) GCCTCCTTAGCTTAGTGGTAGAGCGTTGCA 1 chrVII:661527-661949 ( 61) GCCTCCTTAGCTTAGTGGTAGAGCGTTGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGCYYAGTKGKTWRAGSSNNCG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 35713 bayes= 8.24906 E= 4.9e-237 -1283 -178 218 -170 -251 118 127 -219 -292 103 54 -5 -192 68 3 44 -60 39 22 8 -134 68 54 -5 -51 -1283 98 40 -1283 -1283 -1283 168 8 -1283 184 -1283 -1283 -1283 241 -1283 -1283 184 -1283 8 -1283 147 -19 1 -105 47 -8 40 168 -1283 -1283 -1283 -105 -1283 218 -1283 -1283 -219 -1283 162 -351 13 131 -5 -1283 -1283 241 -1283 -1283 -1283 151 58 -81 -19 -146 92 88 -1283 -278 35 78 -1283 98 -170 95 -19 -32 -192 -81 -278 184 -134 -1283 135 103 -119 -1283 122 139 -219 1 31 31 -51 -60 74 22 -26 -51 165 -61 -219 -119 22 143 -119 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGCYYAGTKGKTWRAGSSNNCG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 73 E= 4.9e-237 0.000000 0.054795 0.849315 0.095890 0.054795 0.424658 0.452055 0.068493 0.041096 0.383562 0.273973 0.301370 0.082192 0.301370 0.191781 0.424658 0.205479 0.246575 0.219178 0.328767 0.123288 0.301370 0.273973 0.301370 0.219178 0.000000 0.369863 0.410959 0.000000 0.000000 0.000000 1.000000 0.328767 0.000000 0.671233 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.671233 0.000000 0.328767 0.000000 0.520548 0.164384 0.315068 0.150685 0.260274 0.178082 0.410959 1.000000 0.000000 0.000000 0.000000 0.150685 0.000000 0.849315 0.000000 0.000000 0.041096 0.000000 0.958904 0.027397 0.205479 0.465753 0.301370 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.534247 0.465753 0.178082 0.164384 0.068493 0.589041 0.575342 0.000000 0.027397 0.397260 0.534247 0.000000 0.369863 0.095890 0.602740 0.164384 0.150685 0.082192 0.178082 0.027397 0.671233 0.123288 0.000000 0.479452 0.383562 0.136986 0.000000 0.438356 0.493151 0.068493 0.315068 0.232877 0.232877 0.219178 0.205479 0.315068 0.219178 0.260274 0.219178 0.589041 0.123288 0.068493 0.136986 0.219178 0.506849 0.136986 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNBDTGGCYYAGTKGKTWRAGSSNNCG MEME-2 regular expression -------------------------------------------------------------------------------- G[GC][CTG][TC][TCGA][CTG][TGA]T[GA]G[CT][CT][TC]AGT[GTC]G[GT]T[AT][AG]AG[CG][GC][ACGT][CTGA][CA][GC] -------------------------------------------------------------------------------- Time 461.42 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAAWAAYGAYMMCDVCVGGAWTCGAACC MEME-3 width = 29 sites = 23 llr = 477 E-value = 3.2e-058 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAAWAAYGAYMMCDVCVGGAWTCGAACC MEME-3 Description -------------------------------------------------------------------------------- Simplified A a88a677::5:53133243:83::19a:: pos.-specific C :::::::6:26347:372:::2:7:::a8 probability G :12::21:82112:24147a2:::9:::: matrix T ::::41342132114::::::5a3:1::2 bits 2.4 * * 2.2 * * 1.9 * * 1.7 * * * *** Relative 1.4 * * * * * * *** Entropy 1.2 * * * *** ******* (30.0 bits) 1.0 **** ** * * * *** ******* 0.7 ***** ** * * ** *** ******* 0.5 ********* * * ****** ******* 0.2 ***************************** 0.0 ----------------------------- Multilevel AAAAAAACGACACCTGCAGGATTCGAACC consensus T TT TCA AAAGA A T sequence GC C C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAWAAYGAYMMCDVCVGGAWTCGAACC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrV:288121-288801 + 25 2.75e-15 TCTAACAATA AAAAAAACGACACCAGCAGGATTTGAACC AGCGCGGGCA chrXII:167704-168269 + 1 3.44e-15 . AAAATAACGACAACTGCAGGACTCGAACC TGCGCGGGCA chrII:226974-227354 - 21 3.44e-15 TACTGTCCAA AAAATAACGACAACTGCAGGACTCGAACC TGCGCGGGCA chrIX:248565-249266 - 45 5.30e-15 AAAAAATAAA AAAATAACGACACCAGCAGGATTTGAACC AGCGCGGGCA chrIV:437537-438174 - 27 2.19e-14 TGGGAATATA AAAATGACGACAACTGCAGGACTCGAACC TGCGCGGGCA chrXII:732010-732297 - 66 5.03e-12 AAGCAA AAAATAATGAGAGCTAAGGGATTCGAACC CTTGCATCCG chrXII:592317-592717 + 45 5.03e-12 CAAAAAACAA AAAATAATGAGAGCTAAGGGATTCGAACC CTTGCATCCG chrXVI:689377-689898 - 38 6.42e-12 AATTTCAAAA AATAATACGACACCAGCAGGATTTGAACC AGCGCGGGCA chrIV:619679-620230 + 58 1.03e-11 AAAAATGTAT AAAAAATCTTCCCCGCCAGGACTTGAACC TGGAATCTTC chrVII:700351-701160 - 30 1.63e-11 TAGATTCAAA AAAATATTGATACCCGCGGGGTTTGAACC CGCGCCTCCG chrXI:490767-491352 - 10 6.48e-11 ATAAAAGTAA AAAAATTCTTCCCCGCCAGGACTTGAACC TGGAATCTT chrXV:274477-275002 - 63 1.87e-10 TCACAAAAA AGAAATGCGTCACAGACAGGATTCGAACC TGCGCAGGTA chrVII:422879-423484 - 53 5.82e-10 TAAATGGAAA AAAATAATGGTTGCTAAGAGATTCGAACT CTTGCATCTT chrIII:90785-91104 - 57 5.82e-10 GTTGAGGAAA AAAATAATGGTTGCTAAGAGATTCGAACT CTTGCATCTT chrXIII:586314-586902 + 71 6.87e-10 GGATGTCTTC AAAAAAATGATTTCGCCCAGGATCGAACT G chrXVI:880006-880554 + 59 1.20e-09 AAGAAAGAAA AAAGAAATGGTCTCTAGCGGGATCGAACC GCTGATCCCC chrXIII:463427-463862 - 10 1.30e-09 TGGTCTGATA AAAAAATCTCCGCGACGGGGAATTGAACC CCGATCTGG chrIV:802569-802835 + 72 4.15e-09 AGAGTAAAAA TAAAAAGAGGTCCTACCCGGATTCGAACC chrXIII:420327-420792 + 72 7.06e-09 AACGGCTGAG ATAAAAATGATTTCGCCCAGGATCGAACT chrVII:541714-542176 - 5 1.16e-08 AGGTAAGAAA AAGAACACTCCGATACGGGGAGTCGAACC CCGG chrXIII:195927-196301 + 62 2.34e-08 CTGTTTAATC AGGAAGTCGCCCAAAGCGAGAATCATACC ACTAGACCAC chrVIII:388665-389200 + 69 2.34e-08 CTGTTTAGGC AGGAAGTCGCCCAAAGCGAGAATCATACC ACT chrVII:205160-205750 + 55 3.81e-08 TTGTACGCTT AAGATGATAATACCTAACTGATTCCAACC TATATTAGTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAWAAYGAYMMCDVCVGGAWTCGAACC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:288121-288801 2.8e-15 24_[+3]_47 chrXII:167704-168269 3.4e-15 [+3]_71 chrII:226974-227354 3.4e-15 20_[-3]_51 chrIX:248565-249266 5.3e-15 44_[-3]_27 chrIV:437537-438174 2.2e-14 26_[-3]_45 chrXII:732010-732297 5e-12 65_[-3]_6 chrXII:592317-592717 5e-12 44_[+3]_27 chrXVI:689377-689898 6.4e-12 37_[-3]_34 chrIV:619679-620230 1e-11 57_[+3]_14 chrVII:700351-701160 1.6e-11 29_[-3]_42 chrXI:490767-491352 6.5e-11 9_[-3]_62 chrXV:274477-275002 1.9e-10 62_[-3]_9 chrVII:422879-423484 5.8e-10 52_[-3]_19 chrIII:90785-91104 5.8e-10 56_[-3]_15 chrXIII:586314-586902 6.9e-10 70_[+3]_1 chrXVI:880006-880554 1.2e-09 58_[+3]_13 chrXIII:463427-463862 1.3e-09 9_[-3]_62 chrIV:802569-802835 4.1e-09 71_[+3] chrXIII:420327-420792 7.1e-09 71_[+3] chrVII:541714-542176 1.2e-08 4_[-3]_67 chrXIII:195927-196301 2.3e-08 61_[+3]_10 chrVIII:388665-389200 2.3e-08 68_[+3]_3 chrVII:205160-205750 3.8e-08 54_[+3]_17 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAWAAYGAYMMCDVCVGGAWTCGAACC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAAWAAYGAYMMCDVCVGGAWTCGAACC width=29 seqs=23 chrV:288121-288801 ( 25) AAAAAAACGACACCAGCAGGATTTGAACC 1 chrXII:167704-168269 ( 1) AAAATAACGACAACTGCAGGACTCGAACC 1 chrII:226974-227354 ( 21) AAAATAACGACAACTGCAGGACTCGAACC 1 chrIX:248565-249266 ( 45) AAAATAACGACACCAGCAGGATTTGAACC 1 chrIV:437537-438174 ( 27) AAAATGACGACAACTGCAGGACTCGAACC 1 chrXII:732010-732297 ( 66) AAAATAATGAGAGCTAAGGGATTCGAACC 1 chrXII:592317-592717 ( 45) AAAATAATGAGAGCTAAGGGATTCGAACC 1 chrXVI:689377-689898 ( 38) AATAATACGACACCAGCAGGATTTGAACC 1 chrIV:619679-620230 ( 58) AAAAAATCTTCCCCGCCAGGACTTGAACC 1 chrVII:700351-701160 ( 30) AAAATATTGATACCCGCGGGGTTTGAACC 1 chrXI:490767-491352 ( 10) AAAAATTCTTCCCCGCCAGGACTTGAACC 1 chrXV:274477-275002 ( 63) AGAAATGCGTCACAGACAGGATTCGAACC 1 chrVII:422879-423484 ( 53) AAAATAATGGTTGCTAAGAGATTCGAACT 1 chrIII:90785-91104 ( 57) AAAATAATGGTTGCTAAGAGATTCGAACT 1 chrXIII:586314-586902 ( 71) AAAAAAATGATTTCGCCCAGGATCGAACT 1 chrXVI:880006-880554 ( 59) AAAGAAATGGTCTCTAGCGGGATCGAACC 1 chrXIII:463427-463862 ( 10) AAAAAATCTCCGCGACGGGGAATTGAACC 1 chrIV:802569-802835 ( 72) TAAAAAGAGGTCCTACCCGGATTCGAACC 1 chrXIII:420327-420792 ( 72) ATAAAAATGATTTCGCCCAGGATCGAACT 1 chrVII:541714-542176 ( 5) AAGAACACTCCGATACGGGGAGTCGAACC 1 chrXIII:195927-196301 ( 62) AGGAAGTCGCCCAAAGCGAGAATCATACC 1 chrVIII:388665-389200 ( 69) AGGAAGTCGCCCAAAGCGAGAATCATACC 1 chrVII:205160-205750 ( 55) AAGATGATAATACCTAACTGATTCCAACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAWAAYGAYMMCDVCVGGAWTCGAACC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 36216 bayes= 10.2267 E= 3.2e-058 162 -1117 -1117 -284 140 -1117 -53 -284 133 -1117 -11 -284 162 -1117 -211 -1117 86 -1117 -1117 48 106 -211 -11 -126 106 -1117 -111 -26 -284 159 -1117 33 -284 -1117 206 -84 74 -11 -11 -126 -1117 159 -111 16 62 47 -111 -84 -26 121 -11 -126 -126 197 -211 -184 16 -211 21 33 -4 69 106 -1117 -52 179 -53 -1117 33 21 106 -1117 -26 -1117 189 -284 -1117 -1117 241 -1117 140 -1117 -11 -1117 -26 21 -211 62 -1117 -1117 -1117 168 -1117 189 -1117 -4 -184 -211 221 -1117 155 -1117 -1117 -184 168 -1117 -1117 -1117 -1117 241 -1117 -1117 -1117 214 -1117 -84 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAWAAYGAYMMCDVCVGGAWTCGAACC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 23 E= 3.2e-058 0.956522 0.000000 0.000000 0.043478 0.826087 0.000000 0.130435 0.043478 0.782609 0.000000 0.173913 0.043478 0.956522 0.000000 0.043478 0.000000 0.565217 0.000000 0.000000 0.434783 0.652174 0.043478 0.173913 0.130435 0.652174 0.000000 0.086957 0.260870 0.043478 0.565217 0.000000 0.391304 0.043478 0.000000 0.782609 0.173913 0.521739 0.173913 0.173913 0.130435 0.000000 0.565217 0.086957 0.347826 0.478261 0.260870 0.086957 0.173913 0.260870 0.434783 0.173913 0.130435 0.130435 0.739130 0.043478 0.086957 0.347826 0.043478 0.217391 0.391304 0.304348 0.304348 0.391304 0.000000 0.217391 0.652174 0.130435 0.000000 0.391304 0.217391 0.391304 0.000000 0.260870 0.000000 0.695652 0.043478 0.000000 0.000000 1.000000 0.000000 0.826087 0.000000 0.173913 0.000000 0.260870 0.217391 0.043478 0.478261 0.000000 0.000000 0.000000 1.000000 0.000000 0.695652 0.000000 0.304348 0.086957 0.043478 0.869565 0.000000 0.913043 0.000000 0.000000 0.086957 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.826087 0.000000 0.173913 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAWAAYGAYMMCDVCVGGAWTCGAACC MEME-3 regular expression -------------------------------------------------------------------------------- AAAA[AT]A[AT][CT]GA[CT][AC][CA]C[TAG][GAC][CA][AGC][GA]GA[TAC]T[CT]GAACC -------------------------------------------------------------------------------- Time 672.43 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:81846-82360 2.17e-01 100 chrI:138927-139347 2.26e-05 64_[+2(9.33e-09)]_6 chrI:142147-143644 2.09e-02 100 chrI:166174-166914 6.27e-01 100 chrI:169683-170699 1.87e-01 100 chrII:9469-10497 3.47e-01 100 chrII:36231-36569 1.16e-05 47_[+2(7.00e-10)]_23 chrII:44942-45361 2.94e-01 100 chrII:60694-61628 9.74e-01 100 chrII:87935-88586 2.88e-01 100 chrII:88946-90420 4.41e-01 100 chrII:165109-165446 1.00e-01 100 chrII:167896-169563 9.26e-01 100 chrII:181285-181645 6.41e-01 100 chrII:197167-197837 2.70e-09 41_[+2(1.36e-13)]_29 chrII:226974-227354 4.90e-12 20_[-3(3.44e-15)]_51 chrII:255104-255693 2.12e-01 100 chrII:266209-266765 9.47e-01 100 chrII:311180-311561 6.27e-01 100 chrII:326467-327151 1.43e-10 41_[+1(7.34e-11)]_30 chrII:332247-333040 3.57e-01 100 chrII:347401-347977 3.33e-05 9_[-1(9.32e-08)]_62 chrII:350596-351049 2.93e-04 54_[+2(1.47e-07)]_16 chrII:405655-406320 1.75e-08 22_[+2(2.05e-07)]_4_[-1(2.63e-08)]_\ 15 chrII:413748-416326 6.19e-01 100 chrII:477026-477773 6.81e-01 100 chrII:592865-593291 9.23e-01 100 chrII:604096-607105 8.36e-01 100 chrII:644952-645429 1.92e-08 60_[-1(7.46e-12)]_11 chrII:800115-800693 3.60e-01 100 chrIII:126-1614 4.11e-02 19_[+2(3.08e-05)]_51 chrIII:8490-9121 6.65e-01 100 chrIII:58442-58993 8.36e-01 100 chrIII:90785-91104 1.47e-07 56_[-3(5.82e-10)]_15 chrIII:107191-107823 8.66e-01 100 chrIII:123383-123803 3.45e-10 42_[+1(2.17e-11)]_29 chrIII:127528-127889 2.28e-05 57_[+2(2.48e-09)]_13 chrIII:142169-143336 5.28e-13 7_[+1(1.68e-11)]_3_[-2(3.42e-09)]_\ 31 chrIII:149722-150209 1.31e-05 38_[-1(5.55e-08)]_33 chrIII:151048-151573 4.70e-18 32_[+1(2.00e-12)]_5_[-2(2.76e-09)]_\ 4 chrIII:162516-164160 9.75e-01 100 chrIII:168034-168545 1.11e-10 70_[+1(4.09e-10)]_1 chrIII:177161-178779 9.98e-01 100 chrIII:227732-228224 9.75e-07 13_[+2(1.12e-10)]_57 chrIII:295343-295913 6.69e-01 100 chrIII:308601-308968 2.22e-01 100 chrIV:83325-83843 1.18e-17 13_[+2(3.42e-09)]_3_[-1(1.68e-11)]_\ 25 chrIV:117146-118208 3.04e-01 100 chrIV:125308-126297 9.76e-01 100 chrIV:129220-131471 8.22e-01 100 chrIV:133082-133621 5.32e-01 100 chrIV:217052-218070 4.49e-01 100 chrIV:221666-222374 6.22e-01 100 chrIV:229434-231844 2.64e-01 100 chrIV:234126-234496 3.00e-01 100 chrIV:307978-310103 1.46e-02 47_[-3(5.78e-05)]_24 chrIV:321662-321965 9.80e-01 100 chrIV:340557-341702 1.74e-01 100 chrIV:358043-358428 8.26e-01 100 chrIV:359236-359794 1.05e-01 100 chrIV:396694-397359 3.20e-01 100 chrIV:397830-398805 1.74e-01 100 chrIV:410197-410456 7.45e-01 100 chrIV:411226-411691 3.62e-01 100 chrIV:411867-412035 2.61e-01 100 chrIV:434104-435123 3.38e-01 100 chrIV:437537-438174 2.78e-11 26_[-3(2.19e-14)]_45 chrIV:465198-469581 7.24e-01 100 chrIV:488436-488983 7.43e-01 100 chrIV:489687-491286 7.63e-01 100 chrIV:519658-519962 2.79e-06 28_[-1(9.32e-08)]_43 chrIV:520704-521177 4.07e-01 100 chrIV:538896-539260 3.09e-01 100 chrIV:541209-541946 9.31e-01 100 chrIV:555402-556505 5.23e-01 100 chrIV:568695-569553 2.27e-01 100 chrIV:578792-580812 2.51e-01 100 chrIV:619679-620230 1.53e-08 57_[+3(1.03e-11)]_14 chrIV:667736-668581 2.50e-01 100 chrIV:802569-802835 4.09e-05 71_[+3(4.15e-09)] chrIV:835874-836360 7.82e-01 100 chrIV:884287-884646 8.16e-09 39_[-1(3.70e-10)]_32 chrIV:945773-946747 9.44e-01 100 chrIV:992683-993416 7.76e-01 100 chrIV:1013473-1013973 9.88e-01 100 chrIV:1016954-1017625 7.36e-02 100 chrIV:1075297-1075765 5.98e-02 33_[-2(4.91e-05)]_37 chrIV:1095132-1095681 1.29e-08 22_[+1(3.70e-10)]_49 chrIV:1150680-1151173 3.84e-06 35_[-2(1.13e-09)]_35 chrIV:1175589-1176065 2.55e-05 51_[+2(8.47e-09)]_19 chrIV:1201527-1201973 2.21e-05 49_[+2(2.76e-09)]_21 chrIV:1236393-1238477 3.43e-01 100 chrIV:1300837-1301347 8.83e-01 100 chrIV:1305414-1305876 2.53e-06 34_[+2(1.48e-10)]_36 chrIV:1351968-1353101 2.21e-05 24_[-2(2.76e-09)]_46 chrIV:1353748-1354066 7.43e-01 100 chrIV:1354266-1356000 5.58e-01 100 chrIV:1359420-1361322 5.75e-01 100 chrIV:1361496-1361764 6.89e-01 100 chrIV:1401284-1401941 6.52e-01 100 chrIV:1402142-1403420 2.27e-01 100 chrIV:1417268-1417875 9.99e-01 100 chrIV:1449780-1451228 5.03e-01 100 chrIV:1461431-1461834 3.10e-01 100 chrIX:68180-69552 6.66e-01 100 chrIX:98536-100122 4.82e-01 100 chrIX:174860-175204 2.25e-07 48_[+2(2.54e-10)]_22 chrIX:183301-183718 8.42e-10 24_[-2(1.36e-13)]_46 chrIX:197373-198065 2.22e-01 100 chrIX:210682-211049 6.64e-01 100 chrIX:248565-249266 7.40e-12 44_[-3(5.30e-15)]_27 chrIX:254188-254566 2.99e-01 100 chrIX:257355-258088 8.55e-02 51_[-3(9.48e-05)]_20 chrIX:299850-300519 7.59e-01 100 chrIX:315619-318281 6.58e-01 100 chrIX:324108-324836 5.53e-02 100 chrIX:325523-326068 5.81e-18 2_[+2(2.54e-10)]_5_[-1(2.22e-10)]_\ 34 chrIX:336112-336819 7.50e-01 100 chrIX:363945-364491 3.91e-01 100 chrIX:370260-370595 2.13e-01 100 chrIX:393939-394520 1.40e-01 100 chrV:6195-6783 3.16e-01 100 chrV:53502-54254 9.54e-01 100 chrV:61072-62133 9.16e-01 100 chrV:69000-69368 5.15e-02 100 chrV:78017-79457 5.03e-03 26_[+2(1.77e-05)]_44 chrV:85114-86795 9.46e-01 100 chrV:99884-100282 8.90e-01 100 chrV:117300-118314 1.99e-01 100 chrV:130979-131399 4.57e-01 100 chrV:135009-136071 5.64e-01 100 chrV:138486-139977 1.46e-01 100 chrV:140193-140913 1.46e-01 100 chrV:141088-141321 4.70e-01 100 chrV:152174-153985 7.08e-02 100 chrV:176895-177461 1.92e-11 4_[-1(7.46e-12)]_67 chrV:235215-236956 8.17e-02 22_[-2(6.70e-05)]_48 chrV:249719-250763 9.95e-01 100 chrV:270355-270676 8.78e-01 100 chrV:288121-288801 2.08e-12 24_[+3(2.75e-15)]_47 chrV:305812-307430 1.85e-01 100 chrV:311737-312295 5.08e-09 65_[+1(1.13e-11)]_6 chrV:354801-355401 2.45e-02 100 chrV:362117-362480 7.27e-01 100 chrV:396169-397981 9.09e-01 100 chrV:423073-423623 8.71e-01 100 chrV:431036-431952 2.24e-01 100 chrV:434402-435152 9.14e-02 100 chrV:435409-435936 8.80e-01 100 chrV:438397-438961 9.44e-06 70_[+2(7.00e-10)] chrV:441805-442708 9.31e-01 100 chrV:443057-443341 7.23e-15 61_[+1(2.71e-12)]_10 chrV:460596-462090 4.19e-01 100 chrV:469248-469776 1.59e-12 30_[-1(8.24e-11)]_41 chrV:485571-486550 9.68e-01 100 chrV:486716-487688 6.71e-01 100 chrV:550902-551601 5.74e-01 100 chrVI:4539-4758 8.43e-01 100 chrVI:64187-65388 3.59e-02 100 chrVI:95418-95907 1.66e-01 100 chrVI:101385-101722 1.26e-01 100 chrVI:131333-131616 7.72e-01 100 chrVI:137216-137755 1.96e-10 59_[+1(4.98e-10)]_12 chrVI:157903-158503 6.75e-01 100 chrVI:162015-162393 8.37e-01 100 chrVI:167227-167702 1.20e-04 22_[+2(1.57e-07)]_48 chrVI:180633-181712 5.99e-01 100 chrVI:190875-191755 9.71e-01 100 chrVI:210316-210902 5.62e-08 68_[+1(1.79e-10)]_3 chrVI:221709-222137 2.48e-01 100 chrVI:222564-224165 4.66e-01 100 chrVI:226504-226973 6.51e-14 8_[+1(2.00e-12)]_5_[-2(2.76e-09)]_\ 28 chrVI:263917-264661 4.72e-01 100 chrVII:110369-110783 4.08e-01 100 chrVII:115219-115728 3.71e-06 64_[+2(2.90e-10)]_6 chrVII:121950-122837 1.82e-01 100 chrVII:148088-149576 4.68e-01 100 chrVII:185227-185927 6.25e-01 100 chrVII:205160-205750 2.31e-04 54_[+3(3.81e-08)]_17 chrVII:254168-254731 6.67e-01 100 chrVII:277007-278722 4.94e-01 100 chrVII:287180-287697 9.07e-03 37_[-2(1.44e-05)]_33 chrVII:310355-312497 6.73e-01 100 chrVII:316342-317419 8.84e-01 100 chrVII:319138-320070 1.18e-01 100 chrVII:328381-329289 9.99e-01 100 chrVII:345860-346648 2.24e-01 100 chrVII:364886-366718 8.02e-01 100 chrVII:371213-371496 8.38e-02 100 chrVII:405466-405898 6.70e-01 100 chrVII:412104-412580 6.02e-13 10_[+1(8.24e-11)]_6_[-2(7.00e-10)]_\ 25 chrVII:422879-423484 1.47e-07 52_[-3(5.82e-10)]_19 chrVII:438559-439873 9.51e-01 100 chrVII:440226-441278 1.30e-07 22_[+1(7.34e-11)]_49 chrVII:531386-531803 4.66e-05 65_[+2(2.05e-07)]_5 chrVII:533316-533607 1.25e-01 100 chrVII:533823-535190 8.76e-01 100 chrVII:541714-542176 3.47e-06 4_[-3(1.16e-08)]_67 chrVII:544403-544902 1.37e-03 16_[-2(2.05e-07)]_54 chrVII:555063-557557 7.15e-01 100 chrVII:561430-561715 9.57e-01 100 chrVII:648772-649353 7.50e-01 100 chrVII:661527-661949 5.49e-04 60_[+2(4.50e-07)]_10 chrVII:700351-701160 2.79e-11 29_[-3(1.63e-11)]_42 chrVII:706942-707188 9.55e-01 100 chrVII:726242-726799 8.19e-01 100 chrVII:730931-731415 6.56e-15 13_[+2(2.48e-09)]_6_[-1(4.98e-10)]_\ 22 chrVII:736186-736979 8.81e-01 100 chrVII:738805-739493 6.30e-18 22_[+2(1.36e-13)]_6_[-1(2.71e-12)]_\ 13 chrVII:766234-766495 2.28e-02 13_[-2(2.98e-05)]_57 chrVII:774126-774638 1.95e-17 16_[+2(4.58e-12)]_5_[-1(6.05e-10)]_\ 20 chrVII:779338-779760 6.64e-01 100 chrVII:787351-788721 6.27e-01 100 chrVII:794083-794557 1.00e+00 100 chrVII:823356-823696 3.23e-17 5_[+2(7.00e-10)]_6_[-1(8.24e-11)]_\ 30 chrVII:828355-828987 2.86e-03 [+3(4.92e-05)]_71 chrVII:844614-845989 9.25e-01 100 chrVII:856740-857017 5.66e-01 100 chrVII:857214-857676 4.55e-06 66_[-2(1.00e-09)]_4 chrVII:876165-876734 3.02e-12 29_[-1(2.00e-12)]_42 chrVII:878580-879107 8.21e-01 100 chrVII:882455-883947 1.57e-02 42_[+3(7.32e-05)]_29 chrVII:930678-931147 5.51e-01 100 chrVII:1000355-1000605 2.05e-01 100 chrVII:1004020-1004402 2.11e-03 54_[+2(4.50e-07)]_16 chrVIII:34412-35137 6.83e-02 100 chrVIII:62560-63001 1.44e-03 58_[-1(8.76e-06)]_13 chrVIII:74898-75907 6.69e-01 100 chrVIII:103783-105490 4.93e-01 100 chrVIII:115828-116297 5.52e-01 100 chrVIII:125893-126327 8.77e-01 100 chrVIII:132824-133368 2.53e-06 31_[-2(1.48e-10)]_39 chrVIII:134070-134821 9.37e-01 100 chrVIII:145900-146775 4.42e-01 100 chrVIII:148988-149238 4.21e-01 100 chrVIII:175031-175761 8.55e-01 100 chrVIII:237748-238081 7.37e-06 45_[-2(7.00e-10)]_25 chrVIII:296704-297254 9.32e-01 100 chrVIII:358306-358795 7.53e-06 39_[-2(7.00e-10)]_31 chrVIII:381476-383347 5.45e-01 100 chrVIII:388665-389200 7.86e-12 19_[+1(5.16e-11)]_20_[+3(2.34e-08)]_\ 3 chrVIII:411012-411785 7.06e-01 100 chrVIII:451286-453159 4.03e-02 66_[-1(3.59e-05)]_5 chrVIII:466908-467275 5.24e-01 100 chrVIII:467488-467708 2.18e-01 100 chrVIII:475507-475903 5.14e-10 59_[+1(2.80e-11)]_12 chrVIII:505813-506240 8.79e-01 100 chrVIII:555726-556377 2.33e-01 100 chrVIII:556952-557170 8.98e-01 100 chrX:59011-59458 5.60e-01 100 chrX:73301-75058 7.52e-01 100 chrX:75304-76503 4.60e-01 100 chrX:90044-90442 6.45e-01 100 chrX:115779-116264 4.60e-01 100 chrX:139032-140344 9.99e-01 100 chrX:157440-157915 5.52e-01 100 chrX:160052-160273 8.97e-01 100 chrX:172752-173174 7.70e-01 100 chrX:196394-197522 4.00e-01 100 chrX:204480-205076 1.60e-14 6_[+2(2.05e-07)]_20_[-3(1.30e-09)]_\ 15 chrX:233035-235314 3.49e-01 100 chrX:354163-354806 8.33e-01 100 chrX:355200-355914 8.47e-01 100 chrX:374175-374850 5.76e-14 3_[-2(2.05e-07)]_19_[+1(1.91e-11)]_\ 19 chrX:377823-378582 8.81e-01 100 chrX:390922-391394 3.64e-01 100 chrX:391763-392111 3.02e-01 100 chrX:396050-396951 9.35e-01 100 chrX:414752-415218 6.55e-14 30_[+2(2.76e-09)]_5_[-1(2.00e-12)]_\ 6 chrX:415717-416490 6.26e-01 100 chrX:422690-423300 2.06e-10 26_[-1(4.58e-11)]_45 chrX:424292-424729 3.03e-07 25_[-2(6.20e-10)]_45 chrX:517662-518122 8.53e-02 100 chrX:523859-524462 6.49e-01 100 chrX:531312-532342 1.66e-05 50_[+2(3.42e-09)]_20 chrX:538524-539024 5.29e-01 100 chrX:540689-541797 9.13e-01 100 chrX:542747-543248 2.76e-12 17_[+1(1.79e-10)]_21_[-2(1.57e-07)]_\ 3 chrX:545453-545758 4.15e-01 100 chrX:607673-609058 1.38e-01 100 chrX:617691-618143 3.30e-07 51_[+2(1.70e-10)]_19 chrX:651132-651622 9.53e-01 100 chrX:663566-664353 8.02e-01 100 chrX:703233-703676 6.18e-01 100 chrX:745020-745530 6.15e-01 100 chrXI:774-1105 3.57e-01 100 chrXI:46719-47007 8.98e-01 100 chrXI:67795-68052 1.66e-01 100 chrXI:74431-74871 6.10e-12 22_[+2(2.48e-09)]_6_[-1(4.98e-10)]_\ 13 chrXI:84011-84440 3.16e-07 32_[+2(6.20e-10)]_38 chrXI:99754-99969 4.92e-01 100 chrXI:107468-108031 3.16e-01 100 chrXI:108230-110140 2.58e-01 100 chrXI:140778-141475 9.34e-01 100 chrXI:158224-159863 7.76e-01 100 chrXI:162432-162777 6.36e-01 100 chrXI:219497-220114 9.96e-01 100 chrXI:282802-284454 9.18e-01 100 chrXI:302682-303234 2.40e-03 9_[+2(1.44e-05)]_61 chrXI:307961-308454 2.31e-06 30_[-2(7.00e-10)]_40 chrXI:312413-313992 3.75e-01 100 chrXI:325863-327579 5.21e-01 100 chrXI:379439-379930 2.46e-06 45_[+2(7.00e-10)]_25 chrXI:382197-382474 7.64e-02 67_[-2(7.33e-05)]_3 chrXI:430782-431646 4.20e-01 100 chrXI:457910-459215 4.55e-06 44_[+2(1.00e-09)]_26 chrXI:490767-491352 3.88e-07 9_[-3(6.48e-11)]_62 chrXI:513206-513512 1.60e-14 15_[+3(1.30e-09)]_20_[-2(2.05e-07)]_\ 6 chrXI:517786-518173 8.24e-08 58_[+2(4.58e-12)]_12 chrXI:551739-552408 1.74e-01 100 chrXI:578743-579299 3.66e-10 51_[-1(1.26e-09)]_20 chrXI:618755-619378 3.80e-01 100 chrXI:644887-645952 9.01e-01 100 chrXI:666604-666774 1.40e-01 100 chrXII:48698-49179 9.78e-01 100 chrXII:92415-92723 3.35e-10 28_[+2(9.33e-09)]_42 chrXII:108585-109017 5.49e-01 100 chrXII:167704-168269 1.15e-18 [+3(3.44e-15)]_30_[-2(1.48e-10)]_11 chrXII:168480-168755 9.86e-01 100 chrXII:198306-199709 6.00e-01 100 chrXII:214692-215062 4.60e-11 64_[+1(1.13e-11)]_7 chrXII:232030-234221 3.21e-01 100 chrXII:241616-242020 9.47e-01 100 chrXII:261671-263955 3.38e-01 100 chrXII:282598-283839 4.35e-01 100 chrXII:366022-366601 2.97e-02 100 chrXII:370571-370947 3.91e-02 55_[+2(4.91e-05)]_15 chrXII:374198-374811 8.61e-01 100 chrXII:424170-424494 4.54e-01 100 chrXII:426912-427516 8.06e-10 17_[-3(4.44e-09)]_54 chrXII:448505-449001 7.47e-01 100 chrXII:459592-460165 1.56e-01 100 chrXII:460346-460745 9.88e-01 100 chrXII:497839-499860 6.57e-01 100 chrXII:521697-522448 9.33e-01 100 chrXII:546314-547574 5.48e-01 100 chrXII:566912-570640 6.72e-01 100 chrXII:592317-592717 1.16e-08 44_[+3(5.03e-12)]_27 chrXII:605180-605615 6.25e-08 55_[-2(5.17e-09)]_15 chrXII:628150-629150 5.11e-01 100 chrXII:656832-657188 7.62e-08 16_[-2(4.58e-12)]_54 chrXII:673513-674660 7.33e-01 100 chrXII:713132-713618 9.96e-01 100 chrXII:732010-732297 4.36e-09 65_[-3(5.03e-12)]_6 chrXII:734597-734974 2.26e-09 66_[+2(1.36e-13)]_4 chrXII:780824-781222 5.41e-01 100 chrXII:781441-781890 6.71e-01 100 chrXII:783931-784523 8.60e-01 100 chrXII:793734-795365 2.43e-01 100 chrXII:796280-797433 8.87e-01 100 chrXII:805406-806833 5.33e-01 100 chrXII:818506-820319 5.73e-01 100 chrXII:837842-839414 1.88e-01 100 chrXII:875190-876399 4.90e-01 100 chrXII:897205-899784 4.57e-02 100 chrXII:921716-922574 1.48e-01 100 chrXII:932061-932556 7.85e-01 100 chrXII:937505-941184 8.89e-01 100 chrXII:947177-949630 3.14e-01 100 chrXII:951061-954276 6.81e-01 100 chrXII:962841-963304 2.35e-07 3_[-2(6.20e-10)]_67 chrXII:975802-976099 9.42e-01 100 chrXII:1017801-1019630 1.53e-01 100 chrXII:1028177-1028600 6.45e-01 100 chrXII:1028798-1029767 9.19e-01 100 chrXII:1051917-1052215 2.22e-15 63_[+1(2.71e-12)]_8 chrXIII:91379-92099 1.11e-01 65_[+1(7.19e-05)]_6 chrXIII:131610-132107 4.30e-11 25_[+1(1.91e-11)]_46 chrXIII:145863-146300 6.92e-01 100 chrXIII:161958-164366 6.48e-01 100 chrXIII:168685-169021 6.35e-09 42_[-1(1.79e-10)]_29 chrXIII:195927-196301 7.86e-12 12_[+1(5.16e-11)]_20_[+3(2.34e-08)]_\ 10 chrXIII:224060-224750 2.79e-01 100 chrXIII:225324-226681 8.84e-01 100 chrXIII:258995-259470 2.16e-06 27_[-2(1.48e-10)]_43 chrXIII:290507-291160 3.12e-14 51_[-1(7.46e-12)]_20 chrXIII:296226-298917 4.59e-01 100 chrXIII:302863-303216 2.81e-02 23_[-1(5.46e-05)]_48 chrXIII:320979-321450 3.17e-08 25_[-2(4.58e-12)]_45 chrXIII:352075-352625 2.22e-08 32_[-1(7.34e-11)]_39 chrXIII:362949-363753 8.54e-01 100 chrXIII:372181-372760 1.55e-19 33_[+1(8.24e-11)]_6_[-2(7.00e-10)]_\ 2 chrXIII:378870-379617 6.72e-01 100 chrXIII:420327-420792 1.54e-05 71_[+3(7.06e-09)] chrXIII:463427-463862 1.41e-07 9_[-3(1.30e-09)]_62 chrXIII:480411-480873 5.50e-14 37_[+1(2.00e-12)]_34 chrXIII:504661-505220 4.55e-06 4_[+2(1.00e-09)]_66 chrXIII:510853-511647 4.90e-01 100 chrXIII:551039-551815 7.29e-01 100 chrXIII:552144-552331 8.79e-01 100 chrXIII:552504-553178 6.41e-03 59_[+3(4.30e-05)]_12 chrXIII:572607-573209 1.22e-17 33_[+1(4.58e-11)]_5_[-2(8.47e-09)]_\ 3 chrXIII:586314-586902 2.34e-06 70_[+3(6.87e-10)]_1 chrXIII:650813-651873 8.33e-01 100 chrXIII:673250-674743 4.68e-01 100 chrXIII:731453-733472 8.80e-01 100 chrXIII:747541-748153 6.09e-01 100 chrXIII:748528-748891 3.20e-01 100 chrXIII:753040-755152 2.67e-01 100 chrXIII:768177-768419 9.89e-01 100 chrXIII:808060-808522 1.35e-09 13_[+1(2.51e-09)]_4_[-2(1.11e-07)]_\ 24 chrXIII:837708-838226 5.66e-11 10_[+2(1.57e-07)]_21_[-1(1.79e-10)]_\ 10 chrXIII:861170-861417 4.08e-01 100 chrXIII:892882-895273 1.55e-01 100 chrXIII:914345-915764 3.06e-02 50_[-3(9.73e-05)]_21 chrXIV:61949-64564 7.17e-01 100 chrXIV:88906-90070 9.06e-01 100 chrXIV:96001-96464 6.60e-12 67_[+1(6.65e-10)]_4 chrXIV:102578-103546 9.56e-01 100 chrXIV:104585-105639 8.49e-01 100 chrXIV:241370-241797 6.85e-01 100 chrXIV:330552-332418 5.32e-01 100 chrXIV:374649-375110 2.52e-06 39_[+2(3.75e-10)]_31 chrXIV:442861-444788 4.10e-01 100 chrXIV:493899-495779 9.05e-01 100 chrXIV:499165-500748 6.59e-01 100 chrXIV:546562-547712 3.49e-17 6_[+2(9.33e-09)]_35_[-1(5.16e-11)] chrXIV:560483-560787 6.90e-01 100 chrXIV:568056-568504 3.28e-01 100 chrXIV:569571-570047 6.48e-01 100 chrXIV:576694-577532 9.53e-01 100 chrXIV:585497-586587 5.38e-01 100 chrXIV:602063-602591 6.30e-18 34_[+2(1.36e-13)]_6_[-1(2.71e-12)]_\ 1 chrXIV:631479-632007 8.80e-01 100 chrXIV:632500-632909 5.64e-01 100 chrXIV:725900-726358 1.38e-06 63_[+1(9.32e-08)]_8 chrXIV:783737-784316 5.41e-01 100 chrXV:39999-40699 9.94e-01 100 chrXV:79734-80158 6.42e-01 100 chrXV:92780-94795 9.37e-01 100 chrXV:109561-110648 8.16e-01 100 chrXV:110861-111195 4.76e-04 25_[-2(6.17e-08)]_45 chrXV:113578-113883 9.51e-01 100 chrXV:159251-160744 4.01e-01 100 chrXV:161112-161752 7.81e-01 100 chrXV:167958-168469 3.71e-01 100 chrXV:216277-216688 2.84e-01 100 chrXV:226454-226884 5.28e-13 [+1(1.68e-11)]_3_[-2(3.42e-09)]_38 chrXV:228080-228583 1.52e-05 49_[+2(2.48e-09)]_21 chrXV:253816-254083 2.56e-01 100 chrXV:274477-275002 3.14e-08 62_[-3(1.87e-10)]_9 chrXV:281797-282608 1.54e-19 11_[+2(3.42e-09)]_3_[-1(1.68e-11)]_\ 27 chrXV:288073-288401 4.18e-12 4_[+2(1.57e-07)]_21_[-1(1.79e-10)]_\ 16 chrXV:300857-301648 5.27e-01 100 chrXV:340139-340750 9.99e-01 100 chrXV:353902-354328 4.25e-06 18_[-2(2.54e-10)]_52 chrXV:424267-424624 4.90e-01 100 chrXV:438421-439409 5.83e-01 100 chrXV:444658-446265 7.73e-01 100 chrXV:464275-464807 1.45e-09 22_[-1(5.16e-11)]_49 chrXV:504914-505530 1.53e-01 100 chrXV:571465-572154 7.65e-01 100 chrXV:594315-594634 9.79e-01 100 chrXV:622566-623362 5.97e-01 100 chrXV:639205-639450 2.78e-01 100 chrXV:663501-664790 2.82e-01 100 chrXV:677736-679652 8.85e-01 100 chrXV:710072-710562 9.49e-01 100 chrXV:779694-780998 1.55e-01 100 chrXV:853993-854795 1.26e-01 100 chrXV:866540-867934 4.93e-01 100 chrXV:899911-901231 1.13e-01 100 chrXV:946232-948663 1.77e-01 100 chrXV:968110-968547 4.49e-01 100 chrXV:976387-976703 8.77e-01 100 chrXV:978795-979162 5.61e-01 100 chrXV:979738-981059 4.98e-01 100 chrXV:1003965-1004701 4.12e-01 100 chrXV:1025685-1026056 7.35e-01 100 chrXV:1027882-1029448 1.88e-01 100 chrXVI:55847-56348 2.31e-01 100 chrXVI:75275-76778 5.67e-01 100 chrXVI:172532-174113 3.85e-01 100 chrXVI:188356-189211 6.75e-01 100 chrXVI:194145-194607 1.03e-01 100 chrXVI:208179-210465 8.90e-02 100 chrXVI:214562-216178 9.91e-01 100 chrXVI:252094-253071 7.58e-01 100 chrXVI:280586-282960 5.28e-01 100 chrXVI:302589-305016 4.36e-01 100 chrXVI:338684-339274 7.06e-01 100 chrXVI:378651-379010 3.46e-01 100 chrXVI:404532-407800 9.87e-01 100 chrXVI:435127-436200 2.75e-02 6_[+1(9.18e-05)]_65 chrXVI:520004-520544 9.88e-01 100 chrXVI:559967-560462 1.20e-08 42_[+1(7.34e-11)]_29 chrXVI:571888-572527 9.87e-01 100 chrXVI:581826-582438 3.02e-12 14_[-1(2.00e-12)]_57 chrXVI:586561-586940 9.32e-01 100 chrXVI:622305-622867 9.78e-14 12_[+1(7.34e-11)]_24_[-2(7.00e-10)]_\ 5 chrXVI:689377-689898 5.52e-09 37_[-3(6.42e-12)]_34 chrXVI:699891-700706 5.81e-01 100 chrXVI:731625-732622 2.77e-01 100 chrXVI:744077-744599 5.07e-09 29_[-1(2.05e-08)]_42 chrXVI:768400-769479 1.77e-01 100 chrXVI:775611-776142 7.21e-01 100 chrXVI:783849-788855 4.73e-01 100 chrXVI:794457-796148 7.83e-01 100 chrXVI:810586-810907 4.72e-10 15_[-1(4.98e-10)]_56 chrXVI:819325-821324 9.15e-01 100 chrXVI:860124-860701 6.72e-17 16_[+2(3.42e-09)]_3_[-1(1.68e-11)]_\ 22 chrXVI:880006-880554 4.28e-06 58_[+3(1.20e-09)]_13 chrXVI:911292-912066 8.57e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************