******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/YJM789--ARR1/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:81864-82318 1.0000 100 chrI:138860-139338 1.0000 100 chrI:166177-166655 1.0000 100 chrII:6778-7102 1.0000 100 chrII:9462-10399 1.0000 100 chrII:36225-37163 1.0000 100 chrII:44664-45363 1.0000 100 chrII:60809-61602 1.0000 100 chrII:87966-88550 1.0000 100 chrII:88970-90302 1.0000 100 chrII:165094-165411 1.0000 100 chrII:167875-168242 1.0000 100 chrII:181040-181679 1.0000 100 chrII:197123-197841 1.0000 100 chrII:226974-227371 1.0000 100 chrII:265683-265849 1.0000 100 chrII:266217-266862 1.0000 100 chrII:326481-327093 1.0000 100 chrII:332287-333028 1.0000 100 chrII:347410-347908 1.0000 100 chrII:350545-351017 1.0000 100 chrII:405676-406196 1.0000 100 chrII:415496-416275 1.0000 100 chrII:477028-477758 1.0000 100 chrII:592884-593291 1.0000 100 chrII:604075-606748 1.0000 100 chrII:644945-645426 1.0000 100 chrIII:129-2049 1.0000 100 chrIII:13952-15353 1.0000 100 chrIII:58381-58992 1.0000 100 chrIII:90786-91091 1.0000 100 chrIII:123428-123802 1.0000 100 chrIII:127514-127889 1.0000 100 chrIII:142195-143337 1.0000 100 chrIII:149729-150127 1.0000 100 chrIII:150664-152242 1.0000 100 chrIII:163436-163906 1.0000 100 chrIII:168078-168559 1.0000 100 chrIII:177041-178819 1.0000 100 chrIII:227728-228210 1.0000 100 chrIII:295343-295975 1.0000 100 chrIII:308569-308984 1.0000 100 chrIV:83267-83824 1.0000 100 chrIV:117146-118228 1.0000 100 chrIV:129175-129384 1.0000 100 chrIV:129594-131228 1.0000 100 chrIV:217091-217702 1.0000 100 chrIV:220949-221258 1.0000 100 chrIV:221556-222367 1.0000 100 chrIV:229363-230425 1.0000 100 chrIV:306690-309427 1.0000 100 chrIV:321615-321946 1.0000 100 chrIV:323073-323534 1.0000 100 chrIV:340553-343890 1.0000 100 chrIV:358053-358496 1.0000 100 chrIV:359045-359774 1.0000 100 chrIV:410192-410459 1.0000 100 chrIV:411235-411675 1.0000 100 chrIV:434118-435101 1.0000 100 chrIV:437537-438248 1.0000 100 chrIV:488466-488991 1.0000 100 chrIV:490850-491253 1.0000 100 chrIV:519656-519951 1.0000 100 chrIV:520235-521179 1.0000 100 chrIV:538856-539262 1.0000 100 chrIV:568589-569343 1.0000 100 chrIV:578719-580370 1.0000 100 chrIV:601334-601757 1.0000 100 chrIV:619671-620309 1.0000 100 chrIV:667758-668564 1.0000 100 chrIV:757510-758406 1.0000 100 chrIV:802558-802838 1.0000 100 chrIV:835839-836318 1.0000 100 chrIV:884284-884739 1.0000 100 chrIV:945481-946698 1.0000 100 chrIV:992679-993443 1.0000 100 chrIV:1013421-1013984 1.0000 100 chrIV:1016938-1017520 1.0000 100 chrIV:1075242-1075774 1.0000 100 chrIV:1095148-1095700 1.0000 100 chrIV:1150691-1151176 1.0000 100 chrIV:1175579-1176074 1.0000 100 chrIV:1201215-1201952 1.0000 100 chrIV:1300722-1301333 1.0000 100 chrIV:1305377-1306419 1.0000 100 chrIV:1352039-1353255 1.0000 100 chrIV:1355716-1356029 1.0000 100 chrIV:1359314-1360038 1.0000 100 chrIV:1400948-1401939 1.0000 100 chrIV:1450618-1451256 1.0000 100 chrIV:1461089-1461845 1.0000 100 chrIX:68166-69305 1.0000 100 chrIX:99621-100315 1.0000 100 chrIX:128188-129869 1.0000 100 chrIX:174882-175393 1.0000 100 chrIX:183270-184020 1.0000 100 chrIX:197169-198383 1.0000 100 chrIX:210681-211311 1.0000 100 chrIX:248528-249018 1.0000 100 chrIX:254197-254573 1.0000 100 chrIX:257356-257778 1.0000 100 chrIX:300039-300677 1.0000 100 chrIX:315566-317623 1.0000 100 chrIX:323983-324554 1.0000 100 chrIX:325420-326114 1.0000 100 chrIX:336100-336649 1.0000 100 chrIX:370246-370590 1.0000 100 chrIX:389453-390877 1.0000 100 chrV:6184-6786 1.0000 100 chrV:53514-54294 1.0000 100 chrV:61082-62599 1.0000 100 chrV:69137-69319 1.0000 100 chrV:85119-86248 1.0000 100 chrV:86444-86780 1.0000 100 chrV:99831-100274 1.0000 100 chrV:110442-110982 1.0000 100 chrV:117613-118300 1.0000 100 chrV:130784-131374 1.0000 100 chrV:135146-136191 1.0000 100 chrV:138471-140913 1.0000 100 chrV:176220-177464 1.0000 100 chrV:249237-249532 1.0000 100 chrV:249724-250775 1.0000 100 chrV:251270-251449 1.0000 100 chrV:270357-270683 1.0000 100 chrV:287763-288739 1.0000 100 chrV:305771-306932 1.0000 100 chrV:311754-312308 1.0000 100 chrV:354791-355201 1.0000 100 chrV:361981-362507 1.0000 100 chrV:396068-397564 1.0000 100 chrV:423087-424329 1.0000 100 chrV:430977-432090 1.0000 100 chrV:434415-435131 1.0000 100 chrV:435367-435933 1.0000 100 chrV:438370-439014 1.0000 100 chrV:441702-442684 1.0000 100 chrV:443038-443469 1.0000 100 chrV:469253-469788 1.0000 100 chrV:487088-487620 1.0000 100 chrV:550888-551590 1.0000 100 chrVI:4513-4759 1.0000 100 chrVI:64148-65535 1.0000 100 chrVI:95468-95928 1.0000 100 chrVI:101375-101593 1.0000 100 chrVI:137269-137795 1.0000 100 chrVI:157905-158460 1.0000 100 chrVI:162015-162393 1.0000 100 chrVI:167224-167699 1.0000 100 chrVI:180658-181267 1.0000 100 chrVI:191202-191753 1.0000 100 chrVI:210445-210957 1.0000 100 chrVI:221356-222244 1.0000 100 chrVI:222889-223070 1.0000 100 chrVI:223271-225098 1.0000 100 chrVI:226494-226945 1.0000 100 chrVII:788-2112 1.0000 100 chrVII:9994-10563 1.0000 100 chrVII:110370-110779 1.0000 100 chrVII:115003-115716 1.0000 100 chrVII:121966-122775 1.0000 100 chrVII:148428-149569 1.0000 100 chrVII:185135-185906 1.0000 100 chrVII:205303-205749 1.0000 100 chrVII:254139-254738 1.0000 100 chrVII:277002-278272 1.0000 100 chrVII:287079-287858 1.0000 100 chrVII:310463-312272 1.0000 100 chrVII:318935-320144 1.0000 100 chrVII:328370-329325 1.0000 100 chrVII:364923-366697 1.0000 100 chrVII:371216-371490 1.0000 100 chrVII:405470-405824 1.0000 100 chrVII:412134-412588 1.0000 100 chrVII:422722-423394 1.0000 100 chrVII:438560-438905 1.0000 100 chrVII:440642-441163 1.0000 100 chrVII:531395-531781 1.0000 100 chrVII:533406-535202 1.0000 100 chrVII:541715-542156 1.0000 100 chrVII:544406-544928 1.0000 100 chrVII:555169-556706 1.0000 100 chrVII:561408-561652 1.0000 100 chrVII:648814-649354 1.0000 100 chrVII:661500-661941 1.0000 100 chrVII:700187-701157 1.0000 100 chrVII:706933-707188 1.0000 100 chrVII:726377-728204 1.0000 100 chrVII:730952-731370 1.0000 100 chrVII:736185-737703 1.0000 100 chrVII:738582-739511 1.0000 100 chrVII:774134-774711 1.0000 100 chrVII:779312-779699 1.0000 100 chrVII:788304-788746 1.0000 100 chrVII:794085-794508 1.0000 100 chrVII:823351-823693 1.0000 100 chrVII:828479-828989 1.0000 100 chrVII:845357-845960 1.0000 100 chrVII:856730-857659 1.0000 100 chrVII:875992-877139 1.0000 100 chrVII:878601-879129 1.0000 100 chrVII:882794-883929 1.0000 100 chrVII:930240-931165 1.0000 100 chrVII:1000358-1000631 1.0000 100 chrVII:1004005-1004403 1.0000 100 chrVIII:62529-63002 1.0000 100 chrVIII:74873-75893 1.0000 100 chrVIII:103837-104359 1.0000 100 chrVIII:115974-116305 1.0000 100 chrVIII:125886-126332 1.0000 100 chrVIII:132794-133359 1.0000 100 chrVIII:134052-134853 1.0000 100 chrVIII:145778-146785 1.0000 100 chrVIII:148990-149390 1.0000 100 chrVIII:174780-176080 1.0000 100 chrVIII:212117-212391 1.0000 100 chrVIII:237699-238091 1.0000 100 chrVIII:296693-297622 1.0000 100 chrVIII:358272-358792 1.0000 100 chrVIII:381492-383393 1.0000 100 chrVIII:388668-389206 1.0000 100 chrVIII:466908-467345 1.0000 100 chrVIII:475476-475904 1.0000 100 chrVIII:505811-506207 1.0000 100 chrVIII:555756-556452 1.0000 100 chrVIII:556951-557191 1.0000 100 chrX:59000-59466 1.0000 100 chrX:73367-74588 1.0000 100 chrX:75347-76423 1.0000 100 chrX:90015-90454 1.0000 100 chrX:115440-115636 1.0000 100 chrX:115809-116192 1.0000 100 chrX:157422-157917 1.0000 100 chrX:160057-160271 1.0000 100 chrX:196675-197518 1.0000 100 chrX:204494-205060 1.0000 100 chrX:215584-217301 1.0000 100 chrX:227763-228631 1.0000 100 chrX:233700-235741 1.0000 100 chrX:354165-354844 1.0000 100 chrX:355117-355742 1.0000 100 chrX:374178-374853 1.0000 100 chrX:378065-378572 1.0000 100 chrX:390918-392120 1.0000 100 chrX:396486-397031 1.0000 100 chrX:414711-416699 1.0000 100 chrX:421955-422206 1.0000 100 chrX:422647-423286 1.0000 100 chrX:424284-424740 1.0000 100 chrX:517709-518121 1.0000 100 chrX:523841-524453 1.0000 100 chrX:531490-532328 1.0000 100 chrX:538523-538736 1.0000 100 chrX:540720-541974 1.0000 100 chrX:542775-543269 1.0000 100 chrX:607496-609014 1.0000 100 chrX:617670-618158 1.0000 100 chrX:650892-651613 1.0000 100 chrX:663672-664345 1.0000 100 chrX:684528-685304 1.0000 100 chrX:690616-690866 1.0000 100 chrX:703010-703676 1.0000 100 chrX:745087-745546 1.0000 100 chrXI:764-1105 1.0000 100 chrXI:46460-47090 1.0000 100 chrXI:67742-68049 1.0000 100 chrXI:74424-75066 1.0000 100 chrXI:84007-84417 1.0000 100 chrXI:99722-99965 1.0000 100 chrXI:103914-104807 1.0000 100 chrXI:108358-109306 1.0000 100 chrXI:140665-141484 1.0000 100 chrXI:158202-159597 1.0000 100 chrXI:162438-162768 1.0000 100 chrXI:219617-220100 1.0000 100 chrXI:302683-303277 1.0000 100 chrXI:307975-308520 1.0000 100 chrXI:312570-314009 1.0000 100 chrXI:322453-322627 1.0000 100 chrXI:333455-334835 1.0000 100 chrXI:379460-379880 1.0000 100 chrXI:382192-382486 1.0000 100 chrXI:414100-414594 1.0000 100 chrXI:430896-431661 1.0000 100 chrXI:457522-459141 1.0000 100 chrXI:490713-491353 1.0000 100 chrXI:513175-513516 1.0000 100 chrXI:517798-518067 1.0000 100 chrXI:578687-579445 1.0000 100 chrXI:617689-619350 1.0000 100 chrXII:53-222 1.0000 100 chrXII:5577-5799 1.0000 100 chrXII:48688-49286 1.0000 100 chrXII:92405-92710 1.0000 100 chrXII:167722-168305 1.0000 100 chrXII:198345-199713 1.0000 100 chrXII:214672-215066 1.0000 100 chrXII:241605-242018 1.0000 100 chrXII:262062-263947 1.0000 100 chrXII:366009-366785 1.0000 100 chrXII:368658-370249 1.0000 100 chrXII:370618-370948 1.0000 100 chrXII:373992-374686 1.0000 100 chrXII:424137-424504 1.0000 100 chrXII:426834-427514 1.0000 100 chrXII:448519-449025 1.0000 100 chrXII:459599-460162 1.0000 100 chrXII:460430-460731 1.0000 100 chrXII:498302-499659 1.0000 100 chrXII:515339-516933 1.0000 100 chrXII:521689-522449 1.0000 100 chrXII:592018-592715 1.0000 100 chrXII:605170-605630 1.0000 100 chrXII:628159-628972 1.0000 100 chrXII:636727-639866 1.0000 100 chrXII:645850-646053 1.0000 100 chrXII:656838-657214 1.0000 100 chrXII:673494-674560 1.0000 100 chrXII:713134-713910 1.0000 100 chrXII:732010-732282 1.0000 100 chrXII:734450-735395 1.0000 100 chrXII:780797-781888 1.0000 100 chrXII:783943-784509 1.0000 100 chrXII:793736-793993 1.0000 100 chrXII:794183-795369 1.0000 100 chrXII:795579-797664 1.0000 100 chrXII:818504-819596 1.0000 100 chrXII:875162-876850 1.0000 100 chrXII:897625-898936 1.0000 100 chrXII:903378-903696 1.0000 100 chrXII:921692-922767 1.0000 100 chrXII:924485-924845 1.0000 100 chrXII:932048-932507 1.0000 100 chrXII:962857-963278 1.0000 100 chrXII:975787-976153 1.0000 100 chrXII:1018143-1019424 1.0000 100 chrXII:1028202-1028584 1.0000 100 chrXII:1051731-1052219 1.0000 100 chrXII:1064002-1064305 1.0000 100 chrXIII:91522-92344 1.0000 100 chrXIII:131435-132117 1.0000 100 chrXIII:145870-146281 1.0000 100 chrXIII:168250-169003 1.0000 100 chrXIII:195936-196302 1.0000 100 chrXIII:224062-224531 1.0000 100 chrXIII:224976-226649 1.0000 100 chrXIII:259040-259485 1.0000 100 chrXIII:290547-291108 1.0000 100 chrXIII:296764-298919 1.0000 100 chrXIII:302848-303196 1.0000 100 chrXIII:320976-321680 1.0000 100 chrXIII:352045-352518 1.0000 100 chrXIII:362939-363423 1.0000 100 chrXIII:372192-372749 1.0000 100 chrXIII:378886-379622 1.0000 100 chrXIII:420313-420854 1.0000 100 chrXIII:463432-463870 1.0000 100 chrXIII:480397-480903 1.0000 100 chrXIII:504668-505324 1.0000 100 chrXIII:526551-526799 1.0000 100 chrXIII:526974-527174 1.0000 100 chrXIII:551355-552323 1.0000 100 chrXIII:552538-553348 1.0000 100 chrXIII:572558-573569 1.0000 100 chrXIII:586397-586896 1.0000 100 chrXIII:587080-587252 1.0000 100 chrXIII:632494-634369 1.0000 100 chrXIII:650527-651208 1.0000 100 chrXIII:731476-734017 1.0000 100 chrXIII:747731-748240 1.0000 100 chrXIII:753611-754903 1.0000 100 chrXIII:768197-768433 1.0000 100 chrXIII:808113-808529 1.0000 100 chrXIII:831703-832027 1.0000 100 chrXIII:837701-838472 1.0000 100 chrXIII:861222-861402 1.0000 100 chrXIII:872713-872931 1.0000 100 chrXIV:61961-64554 1.0000 100 chrXIV:96021-96464 1.0000 100 chrXIV:102582-102986 1.0000 100 chrXIV:104602-105135 1.0000 100 chrXIV:241379-241792 1.0000 100 chrXIV:330424-331119 1.0000 100 chrXIV:374675-375081 1.0000 100 chrXIV:442863-445017 1.0000 100 chrXIV:494926-495809 1.0000 100 chrXIV:499221-499495 1.0000 100 chrXIV:499662-500680 1.0000 100 chrXIV:546580-547702 1.0000 100 chrXIV:560322-560785 1.0000 100 chrXIV:568055-568527 1.0000 100 chrXIV:569609-570048 1.0000 100 chrXIV:602081-602572 1.0000 100 chrXIV:631507-632010 1.0000 100 chrXIV:632498-632961 1.0000 100 chrXIV:725465-726362 1.0000 100 chrXIV:783727-784314 1.0000 100 chrXV:79691-80163 1.0000 100 chrXV:92717-93761 1.0000 100 chrXV:94097-94802 1.0000 100 chrXV:109540-110646 1.0000 100 chrXV:110871-111202 1.0000 100 chrXV:113189-113882 1.0000 100 chrXV:161099-161710 1.0000 100 chrXV:167500-168532 1.0000 100 chrXV:216225-216692 1.0000 100 chrXV:226539-226866 1.0000 100 chrXV:227759-228758 1.0000 100 chrXV:253812-254091 1.0000 100 chrXV:274329-274995 1.0000 100 chrXV:281683-282815 1.0000 100 chrXV:287770-288392 1.0000 100 chrXV:300886-301697 1.0000 100 chrXV:301897-302159 1.0000 100 chrXV:339831-340762 1.0000 100 chrXV:353911-354310 1.0000 100 chrXV:354644-354813 1.0000 100 chrXV:438441-439443 1.0000 100 chrXV:464281-464804 1.0000 100 chrXV:487453-487715 1.0000 100 chrXV:504918-505519 1.0000 100 chrXV:505727-505910 1.0000 100 chrXV:571394-572612 1.0000 100 chrXV:594319-594641 1.0000 100 chrXV:639215-639431 1.0000 100 chrXV:663226-664796 1.0000 100 chrXV:678219-679148 1.0000 100 chrXV:710069-710582 1.0000 100 chrXV:779686-780827 1.0000 100 chrXV:854059-854827 1.0000 100 chrXV:866546-867211 1.0000 100 chrXV:901445-902302 1.0000 100 chrXV:968118-968551 1.0000 100 chrXV:976380-976712 1.0000 100 chrXV:978808-979162 1.0000 100 chrXV:979691-981320 1.0000 100 chrXV:1003976-1004972 1.0000 100 chrXV:1025167-1026078 1.0000 100 chrXV:1028635-1029423 1.0000 100 chrXV:1070692-1071351 1.0000 100 chrXVI:55829-56347 1.0000 100 chrXVI:76091-76781 1.0000 100 chrXVI:135532-135825 1.0000 100 chrXVI:172844-174126 1.0000 100 chrXVI:188584-189212 1.0000 100 chrXVI:208553-211167 1.0000 100 chrXVI:280573-281386 1.0000 100 chrXVI:281562-281928 1.0000 100 chrXVI:302548-305030 1.0000 100 chrXVI:338755-339333 1.0000 100 chrXVI:378658-379013 1.0000 100 chrXVI:404584-405561 1.0000 100 chrXVI:406173-408166 1.0000 100 chrXVI:435557-436199 1.0000 100 chrXVI:519792-520560 1.0000 100 chrXVI:559874-560481 1.0000 100 chrXVI:560658-560942 1.0000 100 chrXVI:571311-572497 1.0000 100 chrXVI:581839-582295 1.0000 100 chrXVI:621468-622863 1.0000 100 chrXVI:689062-689871 1.0000 100 chrXVI:699746-700664 1.0000 100 chrXVI:718596-719391 1.0000 100 chrXVI:731682-732330 1.0000 100 chrXVI:744062-744630 1.0000 100 chrXVI:768535-769481 1.0000 100 chrXVI:775658-776130 1.0000 100 chrXVI:794420-796109 1.0000 100 chrXVI:810582-810881 1.0000 100 chrXVI:819277-819935 1.0000 100 chrXVI:860132-860668 1.0000 100 chrXVI:879600-880567 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/YJM789--ARR1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/YJM789--ARR1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/YJM789--ARR1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 472 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 47200 N= 472 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.309 C 0.191 G 0.191 T 0.309 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/YJM789--ARR1/background): A 0.314 C 0.186 G 0.186 T 0.314 ******************************************************************************** ******************************************************************************** MOTIF MMRCBSGGRATYGAACCSVGGAYCTYCYG MEME-1 width = 29 sites = 69 llr = 1415 E-value = 2.4e-300 ******************************************************************************** -------------------------------------------------------------------------------- Motif MMRCBSGGRATYGAACCSVGGAYCTYCYG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 3343:12:65:::aa:::4:26:::122: pos.-specific C 44:644:::1:7:::a7631::6734543 probability G 2141367a42::a::::33672:111117 matrix T 212:3::::1a3::::21:2:2427423: bits 2.4 * * 2.2 * * * 1.9 * * * 1.7 * * **** Relative 1.5 * * **** * Entropy 1.2 *** ******* * ** * (29.6 bits) 1.0 **** ******** * ** * 0.7 * **** ******** ** *** * 0.5 ******* ***************** * 0.2 ***************************** 0.0 ----------------------------- Multilevel CCGCCGGGAATCGAACCCAGGACCTTCCG consensus AAAATCA GG T TGGTATT CCTTC sequence G C A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MMRCBSGGRATYGAACCSVGGAYCTYCYG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrIII:123428-123802 + 17 5.78e-16 AATGTGGGGC GAGCCGGGACTCGAACCCGGGACCTCCCG CACCCTAAGC chrXV:464281-464804 - 26 4.38e-13 TAAAAGGGGC GAGCTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrXIV:546580-547702 - 72 4.38e-13 . GAGCTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrXIII:195936-196302 + 4 4.38e-13 GGC GAGCTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrVIII:388668-389206 + 11 4.38e-13 ATAATGGGGC GAGCTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrVI:101375-101593 - 11 4.38e-13 AAAAGGGGGC GAGCTGGGAATTGAACCCAGGGCCTCTCG CATGCTTTGT chrXVI:860132-860668 - 66 3.87e-12 CTGCGC AAGCCCGGAATCGAACCGGGGGCCCAACG ATGGCAACGT chrXV:281683-282815 - 2 3.87e-12 AGAAATGCGC AAGCCCGGAATCGAACCGGGGGCCCAACG A chrX:531490-532328 - 6 3.87e-12 GAAACTGCGC AAGCCCGGAATCGAACCGGGGGCCCAACG ATGGC chrX:396486-397031 + 23 3.87e-12 AGAAATGCGC AAGCCCGGAATCGAACCGGGGGCCCAACG ATGGCAACGT chrVI:180658-181267 + 67 3.87e-12 AGGACTGCGC AAGCCCGGAATCGAACCGGGGGCCCAACG ATGGC chrIV:1016938-1017520 + 33 4.47e-12 AGAAACTCCG AAGCGGGGAGTCGAACCCCGGTCTCCACG GTGAGAACGT chrVIII:475476-475904 + 71 8.96e-12 TAAAATGTTC CAACCGAGGATCGAACTCGGGACCTTTGC C chrIV:1075242-1075774 + 19 8.96e-12 ACAAATGTTC CAACCGAGGATCGAACTCGGGACCTTTGC CGTGTGAAGG chrXII:214672-215066 + 69 2.24e-11 ATAAATGGAC GCAACCGGAATCGAACCGATGACCTCTTC CTT chrV:311754-312308 + 47 2.24e-11 TTCATTGGAC GCAACCGGAATCGAACCGATGACCTCTTC CTTGCAAGGG chrXIII:586397-586896 + 45 2.54e-11 AAAAATGATT TCGCCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrXIII:420313-420854 + 60 2.54e-11 AAAAATGATT TCGCCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrXIII:372192-372749 + 30 2.54e-11 AAAAATGATT TCGCCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrXIII:290547-291108 - 62 2.54e-11 GAAAACTCCG ATACGGGGAGTCGAACCCCGGTCTCCACG GTGAAAGCGT chrX:374178-374853 + 46 2.54e-11 CAAAGCACTC ACGATGGGGGTCGAACCCATAATCTTCTG ATTAGAAGTC chrX:355117-355742 - 33 2.54e-11 CAAAGCACTC ACGATGGGGGTCGAACCCATAATCTTCTG ATTAGAAGTC chrVII:828479-828989 + 44 2.54e-11 AAAAGCACTC ACGATGGGGGTCGAACCCATAATCTTCTG ATTAGAAGTC chrVII:823351-823693 - 50 2.54e-11 AAAAATGATT TCGCCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrVII:541715-542156 - 3 2.54e-11 GAACACTCCG ATACGGGGAGTCGAACCCCGGTCTCCACG GT chrV:487088-487620 + 32 2.54e-11 GAATACTCCG ATACGGGGAGTCGAACCCCGGTCTCCACG GTGAAAGCGT chrV:469253-469788 - 27 2.54e-11 AAAAATGATT TCGCCCAGGATCGAACTGGGGACGTTCTG CGTGTTAAGC chrV:354791-355201 - 26 2.54e-11 AAGTACTCCG ATACGGGGAGTCGAACCCCGGTCTCCACG GTGAAAGCGT chrIV:568589-569343 - 4 2.54e-11 CAAAGCACTC ACGATGGGGGTCGAACCCATAATCTTCTG ATT chrII:644945-645426 - 70 2.54e-11 CG ATACGGGGAGTCGAACCCCGGTCTCCACG GTGAAAGCGT chrII:405676-406196 - 30 2.54e-11 CAAAGCACTC ACGATGGGGGTCGAACCCATAATCTTCTG ATTAGAAGTC chrII:326481-327093 + 60 4.15e-11 GAGTTTGATC CAACCGAGGTTCGAACTCGGGATCTTCGC CGTGTAAAGG chrIII:168078-168559 + 38 1.05e-10 AAAAAAGGTC CTACCCGGATTCGAACCGGGGTTGTCCGG ATCAAAACCG chrXVI:819277-819935 - 13 1.63e-10 ATAAATGGTC TCTAGCGGGATCGAACCGCTGATCCCCGC GTTATTAGCA chrV:443038-443469 + 4 1.63e-10 GTC TCTAGCGGGATCGAACCGCTGATCCCCGC GTTATTAGCA chrIV:1095148-1095700 + 1 2.75e-10 . ACTCTGTGGATCGAACACAGGACCTCCAG ATATCTTGAC chrXIV:104602-105135 - 26 3.37e-10 TAATATGCTT CCAATCGGATTTGAACCGATGATCTCCAC ATTACTAGTG chrXIV:96021-96464 + 54 3.37e-10 AAATTTGAGC GGTACGAGAATCGAACCCGTGTCCCCACC TTGGAAGGGT chrXI:46460-47090 + 15 3.37e-10 TCAAATGCCC TCTGTGGGAATTGAACCCACGATCCCCGC ATTACGAGTG chrVIII:115974-116305 + 23 3.37e-10 AAAAATGCTT CCAATCGGATTTGAACCGATGATCTCCAC ATTACTAGTG chrIX:325420-326114 - 70 3.37e-10 TT CCAATCGGATTTGAACCGATGATCTCCAC ATTACTAGTG chrXV:339831-340762 + 58 3.73e-10 AAAATCTTCC CCGCCAGGACTTGAACCTGGAATCTTCTG GTTCGTAGCC chrXI:490713-491353 - 24 3.73e-10 AAATTCTTCC CCGCCAGGACTTGAACCTGGAATCTTCTG GTTCGTAGCC chrIV:619671-620309 + 34 3.73e-10 AAAATCTTCC CCGCCAGGACTTGAACCTGGAATCTTCTG GTTCGTAGCC chrX:538523-538736 - 14 5.52e-10 ATCAACGTTC CGTACGGGACTCGAACCCGCAGTCTTCTC CTTAGGAGGG chrVIII:145778-146785 + 16 6.07e-10 AAGATTGGAC GAGTCCGGAATCGAACCGGAGACCTCTCC CATGCTAAGG chrVII:774134-774711 - 16 6.07e-10 AAATTTGGAC GAGTCCGGAATCGAACCGGAGACCTCTCC CATGCTAAGG chrV:130784-131374 + 58 6.07e-10 AAAATAGGTC TTACCCGGATTCGAACCGGGGTTGTTCGG ATCAAAACCG chrXIII:480397-480903 + 26 8.84e-10 AAAGAAGCCC TGTAGGGGGCTCGAACCCCTAACCTTATG ATTAAGAGTC chrVI:226494-226945 + 24 8.84e-10 AGATAAGCCC TGTAGGGGGCTCGAACCCCTAACCTTATG ATTAAGAGTC chrXVI:810582-810881 - 35 9.69e-10 AATTACGACC CCAGTGAGGGTTGAACTCACGATCTTGCG ATTAACAGTC chrXIV:102582-102986 - 22 9.69e-10 ATAAACGACC CCAGTGAGGGTTGAACTCACGATCTTGCG ATTAACAGTC chrXII:975787-976153 + 68 9.69e-10 ATAAACGACC CCAGTGAGGGTTGAACTCACGATCTTGCG ATTA chrVII:730952-731370 - 66 9.69e-10 ACGACC CCAGTGAGGGTTGAACTCACGATCTTGCG ATTAACAGTC chrVI:137269-137795 + 9 9.69e-10 AAACGACC CCAGTGAGGGTTGAACTCACGATCTTGCG ATTAACAGTC chrXI:578687-579445 - 11 1.06e-09 AAGAACTCCT CATAGGGGGCTCGAACCCCTGACATTTCG GTATCCTTGC chrVIII:358272-358792 + 1 1.27e-09 . ATTCTGTGGATCGAACACAGGACCTCCAG ATAACTTGAC chrVIII:237699-238091 + 8 1.27e-09 AATGCGA ATTCTGTGGATCGAACACAGGACCTCCAG ATAACTTGAC chrXV:571394-572612 - 43 2.32e-09 AAAATCTCCG CGACGGGGAATTGAACCCCGATCTGGCAC GCGACAAGCG chrXII:426834-427514 - 46 2.32e-09 AAATTCTCCG CGACGGGGAATTGAACCCCGATCTGGCAC GCGACAAGCG chrXI:513175-513516 + 42 2.32e-09 AAAATCTCCG CGACGGGGAATTGAACCCCGATCTGGCAC GCGACAAGCG chrX:204494-205060 - 46 2.32e-09 AAAATCTCCG CGACGGGGAATTGAACCCCGATCTGGCAC GCGACAAGCG chrIX:336100-336649 + 30 2.32e-09 AAAATCTCCG CGACGGGGAATTGAACCCCGATCTGGCAC GCGACAAGCG chrXI:302683-303277 - 60 2.74e-09 GAAAATGAAA CGGACAGGAATTGAACCTGCAACCCTTCG ATTGCAATCT chrX:422647-423286 - 60 3.23e-09 AAATGTGCTC CAGGGGAGGTTCGAACTCTCGACCTTCAG ATTATGAGAC chrXVI:435557-436199 + 70 2.13e-08 AAGAAAGCTC GCACTCAGGATCGAACTAAGGACCAACAG AT chrXVI:744062-744630 - 26 3.32e-08 AATTTTGCCA CCTGTCAGAATTGAACTAACGACCTTTGC ATTACAAGTG chrIV:519656-519951 + 45 7.46e-08 GGACGGTTGT CCGCGCGAGTTCGAACCTCGCATCCTTCA ATAACTTATT chrII:347410-347908 + 49 7.46e-08 GGACGGTTGT CCGCGCGAGTTCGAACCTCGCATCCTTCA GTAATATTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MMRCBSGGRATYGAACCSVGGAYCTYCYG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123428-123802 5.8e-16 16_[+1]_55 chrXV:464281-464804 4.4e-13 25_[-1]_46 chrXIV:546580-547702 4.4e-13 71_[-1] chrXIII:195936-196302 4.4e-13 3_[+1]_68 chrVIII:388668-389206 4.4e-13 10_[+1]_61 chrVI:101375-101593 4.4e-13 10_[-1]_61 chrXVI:860132-860668 3.9e-12 65_[-1]_6 chrXV:281683-282815 3.9e-12 1_[-1]_70 chrX:531490-532328 3.9e-12 5_[-1]_66 chrX:396486-397031 3.9e-12 22_[+1]_49 chrVI:180658-181267 3.9e-12 66_[+1]_5 chrIV:1016938-1017520 4.5e-12 32_[+1]_39 chrVIII:475476-475904 9e-12 70_[+1]_1 chrIV:1075242-1075774 9e-12 18_[+1]_53 chrXII:214672-215066 2.2e-11 68_[+1]_3 chrV:311754-312308 2.2e-11 46_[+1]_25 chrXIII:586397-586896 2.5e-11 44_[+1]_27 chrXIII:420313-420854 2.5e-11 59_[+1]_12 chrXIII:372192-372749 2.5e-11 29_[+1]_42 chrXIII:290547-291108 2.5e-11 61_[-1]_10 chrX:374178-374853 2.5e-11 45_[+1]_26 chrX:355117-355742 2.5e-11 32_[-1]_39 chrVII:828479-828989 2.5e-11 43_[+1]_28 chrVII:823351-823693 2.5e-11 49_[-1]_22 chrVII:541715-542156 2.5e-11 2_[-1]_69 chrV:487088-487620 2.5e-11 31_[+1]_40 chrV:469253-469788 2.5e-11 26_[-1]_45 chrV:354791-355201 2.5e-11 25_[-1]_46 chrIV:568589-569343 2.5e-11 3_[-1]_68 chrII:644945-645426 2.5e-11 69_[-1]_2 chrII:405676-406196 2.5e-11 29_[-1]_42 chrII:326481-327093 4.2e-11 59_[+1]_12 chrIII:168078-168559 1e-10 37_[+1]_34 chrXVI:819277-819935 1.6e-10 12_[-1]_59 chrV:443038-443469 1.6e-10 3_[+1]_68 chrIV:1095148-1095700 2.7e-10 [+1]_71 chrXIV:104602-105135 3.4e-10 25_[-1]_46 chrXIV:96021-96464 3.4e-10 53_[+1]_18 chrXI:46460-47090 3.4e-10 14_[+1]_57 chrVIII:115974-116305 3.4e-10 22_[+1]_49 chrIX:325420-326114 3.4e-10 69_[-1]_2 chrXV:339831-340762 3.7e-10 57_[+1]_14 chrXI:490713-491353 3.7e-10 23_[-1]_48 chrIV:619671-620309 3.7e-10 33_[+1]_38 chrX:538523-538736 5.5e-10 13_[-1]_58 chrVIII:145778-146785 6.1e-10 15_[+1]_56 chrVII:774134-774711 6.1e-10 15_[-1]_56 chrV:130784-131374 6.1e-10 57_[+1]_14 chrXIII:480397-480903 8.8e-10 25_[+1]_46 chrVI:226494-226945 8.8e-10 23_[+1]_48 chrXVI:810582-810881 9.7e-10 34_[-1]_37 chrXIV:102582-102986 9.7e-10 21_[-1]_50 chrXII:975787-976153 9.7e-10 67_[+1]_4 chrVII:730952-731370 9.7e-10 65_[-1]_6 chrVI:137269-137795 9.7e-10 8_[+1]_63 chrXI:578687-579445 1.1e-09 10_[-1]_61 chrVIII:358272-358792 1.3e-09 [+1]_71 chrVIII:237699-238091 1.3e-09 7_[+1]_64 chrXV:571394-572612 2.3e-09 42_[-1]_29 chrXII:426834-427514 2.3e-09 45_[-1]_26 chrXI:513175-513516 2.3e-09 41_[+1]_30 chrX:204494-205060 2.3e-09 45_[-1]_26 chrIX:336100-336649 2.3e-09 29_[+1]_42 chrXI:302683-303277 2.7e-09 59_[-1]_12 chrX:422647-423286 3.2e-09 59_[-1]_12 chrXVI:435557-436199 2.1e-08 69_[+1]_2 chrXVI:744062-744630 3.3e-08 25_[-1]_46 chrIV:519656-519951 7.5e-08 44_[+1]_27 chrII:347410-347908 7.5e-08 48_[+1]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MMRCBSGGRATYGAACCSVGGAYCTYCYG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MMRCBSGGRATYGAACCSVGGAYCTYCYG width=29 seqs=69 chrIII:123428-123802 ( 17) GAGCCGGGACTCGAACCCGGGACCTCCCG 1 chrXV:464281-464804 ( 26) GAGCTGGGAATTGAACCCAGGGCCTCTCG 1 chrXIV:546580-547702 ( 72) GAGCTGGGAATTGAACCCAGGGCCTCTCG 1 chrXIII:195936-196302 ( 4) GAGCTGGGAATTGAACCCAGGGCCTCTCG 1 chrVIII:388668-389206 ( 11) GAGCTGGGAATTGAACCCAGGGCCTCTCG 1 chrVI:101375-101593 ( 11) GAGCTGGGAATTGAACCCAGGGCCTCTCG 1 chrXVI:860132-860668 ( 66) AAGCCCGGAATCGAACCGGGGGCCCAACG 1 chrXV:281683-282815 ( 2) AAGCCCGGAATCGAACCGGGGGCCCAACG 1 chrX:531490-532328 ( 6) AAGCCCGGAATCGAACCGGGGGCCCAACG 1 chrX:396486-397031 ( 23) AAGCCCGGAATCGAACCGGGGGCCCAACG 1 chrVI:180658-181267 ( 67) AAGCCCGGAATCGAACCGGGGGCCCAACG 1 chrIV:1016938-1017520 ( 33) AAGCGGGGAGTCGAACCCCGGTCTCCACG 1 chrVIII:475476-475904 ( 71) CAACCGAGGATCGAACTCGGGACCTTTGC 1 chrIV:1075242-1075774 ( 19) CAACCGAGGATCGAACTCGGGACCTTTGC 1 chrXII:214672-215066 ( 69) GCAACCGGAATCGAACCGATGACCTCTTC 1 chrV:311754-312308 ( 47) GCAACCGGAATCGAACCGATGACCTCTTC 1 chrXIII:586397-586896 ( 45) TCGCCCAGGATCGAACTGGGGACGTTCTG 1 chrXIII:420313-420854 ( 60) TCGCCCAGGATCGAACTGGGGACGTTCTG 1 chrXIII:372192-372749 ( 30) TCGCCCAGGATCGAACTGGGGACGTTCTG 1 chrXIII:290547-291108 ( 62) ATACGGGGAGTCGAACCCCGGTCTCCACG 1 chrX:374178-374853 ( 46) ACGATGGGGGTCGAACCCATAATCTTCTG 1 chrX:355117-355742 ( 33) ACGATGGGGGTCGAACCCATAATCTTCTG 1 chrVII:828479-828989 ( 44) ACGATGGGGGTCGAACCCATAATCTTCTG 1 chrVII:823351-823693 ( 50) TCGCCCAGGATCGAACTGGGGACGTTCTG 1 chrVII:541715-542156 ( 3) ATACGGGGAGTCGAACCCCGGTCTCCACG 1 chrV:487088-487620 ( 32) ATACGGGGAGTCGAACCCCGGTCTCCACG 1 chrV:469253-469788 ( 27) TCGCCCAGGATCGAACTGGGGACGTTCTG 1 chrV:354791-355201 ( 26) ATACGGGGAGTCGAACCCCGGTCTCCACG 1 chrIV:568589-569343 ( 4) ACGATGGGGGTCGAACCCATAATCTTCTG 1 chrII:644945-645426 ( 70) ATACGGGGAGTCGAACCCCGGTCTCCACG 1 chrII:405676-406196 ( 30) ACGATGGGGGTCGAACCCATAATCTTCTG 1 chrII:326481-327093 ( 60) CAACCGAGGTTCGAACTCGGGATCTTCGC 1 chrIII:168078-168559 ( 38) CTACCCGGATTCGAACCGGGGTTGTCCGG 1 chrXVI:819277-819935 ( 13) TCTAGCGGGATCGAACCGCTGATCCCCGC 1 chrV:443038-443469 ( 4) TCTAGCGGGATCGAACCGCTGATCCCCGC 1 chrIV:1095148-1095700 ( 1) ACTCTGTGGATCGAACACAGGACCTCCAG 1 chrXIV:104602-105135 ( 26) CCAATCGGATTTGAACCGATGATCTCCAC 1 chrXIV:96021-96464 ( 54) GGTACGAGAATCGAACCCGTGTCCCCACC 1 chrXI:46460-47090 ( 15) TCTGTGGGAATTGAACCCACGATCCCCGC 1 chrVIII:115974-116305 ( 23) CCAATCGGATTTGAACCGATGATCTCCAC 1 chrIX:325420-326114 ( 70) CCAATCGGATTTGAACCGATGATCTCCAC 1 chrXV:339831-340762 ( 58) CCGCCAGGACTTGAACCTGGAATCTTCTG 1 chrXI:490713-491353 ( 24) CCGCCAGGACTTGAACCTGGAATCTTCTG 1 chrIV:619671-620309 ( 34) CCGCCAGGACTTGAACCTGGAATCTTCTG 1 chrX:538523-538736 ( 14) CGTACGGGACTCGAACCCGCAGTCTTCTC 1 chrVIII:145778-146785 ( 16) GAGTCCGGAATCGAACCGGAGACCTCTCC 1 chrVII:774134-774711 ( 16) GAGTCCGGAATCGAACCGGAGACCTCTCC 1 chrV:130784-131374 ( 58) TTACCCGGATTCGAACCGGGGTTGTTCGG 1 chrXIII:480397-480903 ( 26) TGTAGGGGGCTCGAACCCCTAACCTTATG 1 chrVI:226494-226945 ( 24) TGTAGGGGGCTCGAACCCCTAACCTTATG 1 chrXVI:810582-810881 ( 35) CCAGTGAGGGTTGAACTCACGATCTTGCG 1 chrXIV:102582-102986 ( 22) CCAGTGAGGGTTGAACTCACGATCTTGCG 1 chrXII:975787-976153 ( 68) CCAGTGAGGGTTGAACTCACGATCTTGCG 1 chrVII:730952-731370 ( 66) CCAGTGAGGGTTGAACTCACGATCTTGCG 1 chrVI:137269-137795 ( 9) CCAGTGAGGGTTGAACTCACGATCTTGCG 1 chrXI:578687-579445 ( 11) CATAGGGGGCTCGAACCCCTGACATTTCG 1 chrVIII:358272-358792 ( 1) ATTCTGTGGATCGAACACAGGACCTCCAG 1 chrVIII:237699-238091 ( 8) ATTCTGTGGATCGAACACAGGACCTCCAG 1 chrXV:571394-572612 ( 43) CGACGGGGAATTGAACCCCGATCTGGCAC 1 chrXII:426834-427514 ( 46) CGACGGGGAATTGAACCCCGATCTGGCAC 1 chrXI:513175-513516 ( 42) CGACGGGGAATTGAACCCCGATCTGGCAC 1 chrX:204494-205060 ( 46) CGACGGGGAATTGAACCCCGATCTGGCAC 1 chrIX:336100-336649 ( 30) CGACGGGGAATTGAACCCCGATCTGGCAC 1 chrXI:302683-303277 ( 60) CGGACAGGAATTGAACCTGCAACCCTTCG 1 chrX:422647-423286 ( 60) CAGGGGAGGTTCGAACTCTCGACCTTCAG 1 chrXVI:435557-436199 ( 70) GCACTCAGGATCGAACTAAGGACCAACAG 1 chrXVI:744062-744630 ( 26) CCTGTCAGAATTGAACTAACGACCTTTGC 1 chrIV:519656-519951 ( 45) CCGCGCGAGTTCGAACCTCGCATCCTTCA 1 chrII:347410-347908 ( 49) CCGCGCGAGTTCGAACCTCGCATCCTTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MMRCBSGGRATYGAACCSVGGAYCTYCYG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 33984 bayes= 10.3181 E= 2.4e-300 -19 107 -10 -98 -19 127 -36 -127 26 -1275 127 -85 -27 168 -68 -344 -1275 102 57 15 -244 96 164 -1275 -35 -1275 193 -285 -344 -1275 239 -1275 85 -1275 123 -1275 73 -68 32 -127 -1275 -1275 -1275 167 -1275 181 -1275 15 -1275 -1275 243 -1275 167 -1275 -1275 -1275 167 -1275 -1275 -1275 -1275 243 -1275 -1275 -285 196 -1275 -44 -344 164 71 -185 26 49 90 -443 -344 -36 168 -44 -35 -268 196 -1275 102 -1275 -22 -63 -1275 178 -1275 21 -443 196 -87 -98 -443 49 -136 105 -185 107 -136 52 -63 141 -136 -44 -74 118 -51 -27 -344 71 184 -1275 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MMRCBSGGRATYGAACCSVGGAYCTYCYG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 69 E= 2.4e-300 0.275362 0.391304 0.173913 0.159420 0.275362 0.449275 0.144928 0.130435 0.376812 0.000000 0.449275 0.173913 0.260870 0.594203 0.115942 0.028986 0.000000 0.376812 0.275362 0.347826 0.057971 0.362319 0.579710 0.000000 0.246377 0.000000 0.710145 0.043478 0.028986 0.000000 0.971014 0.000000 0.565217 0.000000 0.434783 0.000000 0.521739 0.115942 0.231884 0.130435 0.000000 0.000000 0.000000 1.000000 0.000000 0.652174 0.000000 0.347826 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.043478 0.724638 0.000000 0.231884 0.028986 0.579710 0.304348 0.086957 0.376812 0.260870 0.347826 0.014493 0.028986 0.144928 0.594203 0.231884 0.246377 0.028986 0.724638 0.000000 0.637681 0.000000 0.159420 0.202899 0.000000 0.637681 0.000000 0.362319 0.014493 0.724638 0.101449 0.159420 0.014493 0.260870 0.072464 0.652174 0.086957 0.391304 0.072464 0.449275 0.202899 0.492754 0.072464 0.231884 0.188406 0.420290 0.130435 0.260870 0.028986 0.304348 0.666667 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MMRCBSGGRATYGAACCSVGGAYCTYCYG MEME-1 regular expression -------------------------------------------------------------------------------- [CA][CA][GA][CA][CTG][GC][GA]G[AG][AG]T[CT]GAAC[CT][CG][AGC][GT][GA][AT][CT]C[TC][TC][CTA][CT][GC] -------------------------------------------------------------------------------- Time 207.99 secs. ******************************************************************************** ******************************************************************************** MOTIF VCCMYTAAACCACTHGGSCW MEME-2 width = 20 sites = 79 llr = 1048 E-value = 9.8e-135 ******************************************************************************** -------------------------------------------------------------------------------- Motif VCCMYTAAACCACTHGGSCW MEME-2 Description -------------------------------------------------------------------------------- Simplified A 4::5::757:1a12321:35 pos.-specific C 38745:121a6:6232257: probability G 2231::121::::11674:: matrix T 1:::5a2:::3:2541:::4 bits 2.4 * 2.2 * 1.9 * 1.7 * * * Relative 1.5 ** * * * * Entropy 1.2 ** * * * *** (19.1 bits) 1.0 ** ** * * *** 0.7 ***** ***** **** 0.5 ************ ***** 0.2 ************* ***** 0.0 -------------------- Multilevel ACCATTAAACCACTTGGCCA consensus CGGCC C T TCCC GAT sequence G A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCMYTAAACCACTHGGSCW MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrXII:732010-732282 - 1 1.00e-10 CTAAATCTGA CGCCTTAAACCACTCGGCCA chrX:617670-618158 - 62 1.00e-10 CTAAATCTGA CGCCTTAAACCACTCGGCCA AACTCCCATT chrXII:962857-963278 + 12 1.70e-10 TTAAGTCTGC CGCCTTAGACCACTCGGCCA ACCCTCCGTC chrXI:84007-84417 - 53 1.70e-10 TTAAGTCTGC CGCCTTAGACCACTCGGCCA ACCCTCCATA chrX:424284-424740 + 27 1.70e-10 TTAAGTCTGC CGCCTTAGACCACTCGGCCA ACCCTCCATC chrVII:700187-701157 - 60 1.70e-10 CTCGACCTGA CGCCTTAGACCACTCGGCCA GAGTACCAAT chrII:347410-347908 - 1 1.70e-10 TTAAGTCTGC CGCCTTAGACCACTCGGCCA chrXVI:860132-860668 - 28 2.06e-09 GTTGGATTTT ACCACTAAACCACTTGCGCT TGTTATTTAC chrXV:226539-226866 + 11 2.06e-09 GTTGGATTTT ACCACTAAACCACTTGCGCT GAATTTCTTG chrX:396486-397031 + 70 2.06e-09 GTTGGATTTT ACCACTAAACCACTTGCGCT TACTTTTGAT chrVII:845357-845960 - 40 2.06e-09 GTTGGATTTT ACCACTAAACCACTTGCGCT TGTTATTTAT chrVI:162015-162393 - 73 2.06e-09 TGGATTTT ACCACTAAACCACTTGCGCT TGTTTTCTTG chrIV:83267-83824 - 52 2.06e-09 GTTGGATTTT ACCACTAAACCACTTGCGCT AAGTGAACTT chrIII:142195-143337 + 37 2.06e-09 GTTGGATTTT ACCACTAAACCACTTGCGCT AGTAATCTTG chrXII:92405-92710 - 40 7.48e-09 CGAGAATCAT ACCACTAGACCACACGCCCT TATTAACTTG chrXV:274329-274995 - 68 1.05e-08 TAGCAGGGCA TCGCCTTAACCACTCGGCCA CTGGGACACG chrXII:167722-168305 + 36 1.05e-08 TTCTAATCTT TCGCCTTAACCACTCGGCCA AGTTGCCATA chrVIII:132794-133359 + 55 1.05e-08 TTCTAATCTT TCGCCTTAACCACTCGGCCA AGTTGCCACT chrV:86444-86780 - 49 1.05e-08 TTCTAATCTT TCGCCTTAACCACTCGGCCA AGTTGCCATA chrIV:1150691-1151176 + 32 1.05e-08 ATAGCAGGCA TCGCCTTAACCACTCGGCCA CTGGGACTGA chrIII:227728-228210 - 30 1.05e-08 TTCGAGTCTC TCGCCTTAACCACTCGGCCA TAGTGCCATT chrXVI:810582-810881 - 2 4.82e-08 AACAGTCGCA CGCCTTAACCAACTTGGCCA T chrXII:656838-657214 + 12 4.82e-08 GAGCGCGCTA CCGACTACGCCACACGCCCA ATTTTCTTGT chrVII:730952-731370 - 33 4.82e-08 AACAGTCGCA CGCCTTAACCAACTTGGCCA TGGAGTCTTT chrVI:137269-137795 + 51 4.82e-08 AACAGTCGCA CGCCTTAACCAACTTGGCCA TGGAGTCAGT chrIII:127514-127889 - 72 4.82e-08 ACAGTCGCA CGCCTTAACCAACTTGGCCA TGGAGTCATT chrVIII:145778-146785 + 65 6.35e-08 GAGCGCGCTA CCGACTACGCCACACGCCCT GATATTTGTT chrVII:205303-205749 - 52 1.07e-07 TTGAATCAGG CGCCTTAGACCGCTCGGCCA AACAACCACT chrXIV:546580-547702 - 2 1.56e-07 CGAGAATCAT ACCACTAGACCACACGCCCG A chrXIII:747731-748240 + 10 2.22e-07 AGACGCGTT GCCATTACGCCACGCGAGCT AGTCATATGT chrXV:353911-354310 + 27 2.49e-07 TACTAGTGTG GCGCCTTACCAACTTGGCCA TAGAAGCAGT chrVIII:115974-116305 + 64 2.49e-07 TACTAGTGTG GCGCCTTACCAACTTGGCCA TAGAAGCTCT chrIX:325420-326114 - 38 2.49e-07 TACTAGTGTG GCGCCTTACCAACTTGGCCA TAGAAGCTCG chrXIII:372192-372749 + 80 3.12e-07 GATGCCATAA CCGACTAGACCACGAAACCA G chrXI:307975-308520 + 2 3.12e-07 A CCGACTAGACCACGAAACCA CTTAATTGTT chrVII:823351-823693 - 9 3.12e-07 GATGCCATAA CCGACTAGACCACGAAACCA CTCTTATT chrVII:412134-412588 + 38 3.12e-07 GATGCCATAA CCGACTAGACCACGAAACCA GTTTTTTGAT chrXI:379460-379880 - 59 3.88e-07 GATGCCATAA CCGACTAGACCACGAAACCT ATTAATCTGT chrV:438370-439014 - 57 3.88e-07 GATGCCATAA CCGACTAGACCACGAAACCT AATTTGTTGA chrX:542775-543269 + 45 6.51e-07 TACAGTCTTG CGCCTTAAACCAACTTGGCT ACCGAGAGTA chrVI:210445-210957 + 29 6.51e-07 TACAGTCTTG CGCCTTAAACCAACTTGGCT ACCGAGAGTC chrVI:167224-167699 - 34 6.51e-07 TACAGTCTTG CGCCTTAAACCAACTTGGCT ACCGAGAGTC chrIII:123428-123802 + 65 6.51e-07 CGAGAATCAT ACCTCTAGACCACACGCCCT CCTTTGAAAA chrXIV:602081-602572 - 43 7.19e-07 ATTAGCACGG TGCCTTAACCAACTGGGCCA AGAGACCATT chrX:374178-374853 + 12 7.19e-07 GCCCATTCTG ACCATTAAACTATCACGGAA GAAACAAAGC chrX:355117-355742 - 76 7.19e-07 TTCTG ACCATTAAACTATCACGGAA GAAACAAAGC chrVII:544406-544928 + 13 7.19e-07 GCCCATTCTG ACCATTAAACTATCACGGAA GAAATATCTG chrVII:531395-531781 - 71 7.19e-07 GCCCATTCTG ACCATTAAACTATCACGGAA GTAACTCGAG chrV:443038-443469 + 46 7.19e-07 ATTAGCACGG TGCCTTAACCAACTGGGCCA AGAGACCAAA chrIV:568589-569343 - 47 7.19e-07 GCCCATTCTG ACCATTAAACTATCACGGAA GAAACAAAGC chrII:405676-406196 - 73 7.19e-07 CCATTCTG ACCATTAAACTATCACGGAA GAAACAAAGC chrII:197123-197841 - 69 7.19e-07 ATTAGCACGG TGCCTTAACCAACTGGGCCA AGAGACCTTG chrXV:571394-572612 - 4 8.72e-07 GCCCATTCTG ACCATTAAACTATCACGGAT TTT chrXII:426834-427514 - 7 8.72e-07 GCCCATTCTG ACCATTAAACTATCACGGAT AAGAAA chrX:204494-205060 - 7 8.72e-07 GCCCATTCTG ACCATTAAACTATCACGGAT TTTTAT chrIX:336100-336649 + 78 8.72e-07 GCCCATTCTG ACCATTAAACTATCACGGAT TTG chrXI:46460-47090 + 63 9.58e-07 GCGATGCCTT ACCACTTGGCCAAAAGGGCT GAGTAATTTT chrIV:1016938-1017520 + 81 1.26e-06 TGATGTGATA GCCGTTACACTACATCGGAT chrXIII:808113-808529 + 28 1.50e-06 GAAAGTGATA ACCACTACACTATAGGACCT TTTTCTTCTG chrXV:110871-111202 + 29 1.78e-06 TGGGATGATA ACCACTACACTAACCGCCCG GGTTAATTGT chrXII:373992-374686 - 73 1.94e-06 GTAGCCAG ACGCCGTGACCATTGGGCCA CGAGGAACAA chrIV:619671-620309 + 75 1.94e-06 TCGTAGCCAG ACGCCGTGACCATTGGGCCA CGAGGA chrXII:605170-605630 + 64 2.28e-06 CGAAGCTCTA ACCACTGAGCTACACGAGCA TTTTCGAAAG chrVII:1004005-1004403 - 61 2.47e-06 GCAACGCTCT ACCACTAAGCTAAGGAGGCA AACCCTTGAA chrVII:661500-661941 - 78 2.47e-06 TCT ACCACTAAGCTAAGGAGGCA AATTTTTACC chrXIII:290547-291108 - 23 3.90e-06 TGATGTGATA GCCGTTACACTATATCGGAT TATATTTCAC chrXI:140665-141484 + 47 3.90e-06 TGATGTGATA GCCGTTACACTATATCGGAT TACAAAGGAT chrX:115809-116192 + 42 3.90e-06 TGATGTGATA GCCGTTACACTATATCGGAT TATAAACGGT chrV:487088-487620 + 80 3.90e-06 TGATGTGATA GCCGTTACACTATATCGGAT T chrIX:370246-370590 - 48 3.90e-06 TGATGTGATA GCCGTTACACTATATCGGAT TATAATCTAT chrII:644945-645426 - 31 3.90e-06 TGATGTGATA GCCGTTACACTATATCGGAT AATAACTTAT chrVI:226494-226945 + 73 4.49e-06 ATACGCGCTA CCGATTGCGCCAACAAGGCA TTTTAATC chrXII:875162-876850 - 51 4.82e-06 CGAAATCTCC GGCACTTCCCCACGTGACAT TGCCAAACAA chrXVI:581839-582295 - 44 5.16e-06 ATACGCGCTA CCGATTGCGCCAACAAGGCT CTTTTGTTGA chrXIII:480397-480903 + 75 5.16e-06 ATACGCGCTA CCGATTGCGCCAACAAGGCT ACTTAT chrXIII:259040-259485 + 9 5.90e-06 TCGCCTTA ACCACTCGGCCAAGTTGCCA TACTAACTTG chrXV:854059-854827 + 59 9.15e-06 CCGAGATTCC GCGCTTCCACCACTTAGTAT GATTCATATT chrV:434415-435131 - 53 9.15e-06 CCGAGATTCC GCGCTTCCACCACTTAGTAT GATTCATATT chrIV:945481-946698 - 61 9.15e-06 CCGAGATTCC GCGCTTCCACCACTTAGTAT GATTCATATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCMYTAAACCACTHGGSCW MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:732010-732282 1e-10 [-2]_80 chrX:617670-618158 1e-10 61_[-2]_19 chrXII:962857-963278 1.7e-10 11_[+2]_69 chrXI:84007-84417 1.7e-10 52_[-2]_28 chrX:424284-424740 1.7e-10 26_[+2]_54 chrVII:700187-701157 1.7e-10 59_[-2]_21 chrII:347410-347908 1.7e-10 [-2]_80 chrXVI:860132-860668 2.1e-09 27_[-2]_53 chrXV:226539-226866 2.1e-09 10_[+2]_70 chrX:396486-397031 2.1e-09 69_[+2]_11 chrVII:845357-845960 2.1e-09 39_[-2]_41 chrVI:162015-162393 2.1e-09 72_[-2]_8 chrIV:83267-83824 2.1e-09 51_[-2]_29 chrIII:142195-143337 2.1e-09 36_[+2]_44 chrXII:92405-92710 7.5e-09 39_[-2]_41 chrXV:274329-274995 1e-08 67_[-2]_13 chrXII:167722-168305 1e-08 35_[+2]_45 chrVIII:132794-133359 1e-08 54_[+2]_26 chrV:86444-86780 1e-08 48_[-2]_32 chrIV:1150691-1151176 1e-08 31_[+2]_49 chrIII:227728-228210 1e-08 29_[-2]_51 chrXVI:810582-810881 4.8e-08 1_[-2]_79 chrXII:656838-657214 4.8e-08 11_[+2]_69 chrVII:730952-731370 4.8e-08 32_[-2]_48 chrVI:137269-137795 4.8e-08 50_[+2]_30 chrIII:127514-127889 4.8e-08 71_[-2]_9 chrVIII:145778-146785 6.3e-08 64_[+2]_16 chrVII:205303-205749 1.1e-07 51_[-2]_29 chrXIV:546580-547702 1.6e-07 1_[-2]_79 chrXIII:747731-748240 2.2e-07 9_[+2]_71 chrXV:353911-354310 2.5e-07 26_[+2]_54 chrVIII:115974-116305 2.5e-07 63_[+2]_17 chrIX:325420-326114 2.5e-07 37_[-2]_43 chrXIII:372192-372749 3.1e-07 79_[+2]_1 chrXI:307975-308520 3.1e-07 1_[+2]_79 chrVII:823351-823693 3.1e-07 8_[-2]_72 chrVII:412134-412588 3.1e-07 37_[+2]_43 chrXI:379460-379880 3.9e-07 58_[-2]_22 chrV:438370-439014 3.9e-07 56_[-2]_24 chrX:542775-543269 6.5e-07 44_[+2]_36 chrVI:210445-210957 6.5e-07 28_[+2]_52 chrVI:167224-167699 6.5e-07 33_[-2]_47 chrIII:123428-123802 6.5e-07 64_[+2]_16 chrXIV:602081-602572 7.2e-07 42_[-2]_38 chrX:374178-374853 7.2e-07 11_[+2]_69 chrX:355117-355742 7.2e-07 75_[-2]_5 chrVII:544406-544928 7.2e-07 12_[+2]_68 chrVII:531395-531781 7.2e-07 70_[-2]_10 chrV:443038-443469 7.2e-07 45_[+2]_35 chrIV:568589-569343 7.2e-07 46_[-2]_34 chrII:405676-406196 7.2e-07 72_[-2]_8 chrII:197123-197841 7.2e-07 68_[-2]_12 chrXV:571394-572612 8.7e-07 3_[-2]_77 chrXII:426834-427514 8.7e-07 6_[-2]_74 chrX:204494-205060 8.7e-07 6_[-2]_74 chrIX:336100-336649 8.7e-07 77_[+2]_3 chrXI:46460-47090 9.6e-07 62_[+2]_18 chrIV:1016938-1017520 1.3e-06 80_[+2] chrXIII:808113-808529 1.5e-06 27_[+2]_53 chrXV:110871-111202 1.8e-06 28_[+2]_52 chrXII:373992-374686 1.9e-06 72_[-2]_8 chrIV:619671-620309 1.9e-06 74_[+2]_6 chrXII:605170-605630 2.3e-06 63_[+2]_17 chrVII:1004005-1004403 2.5e-06 60_[-2]_20 chrVII:661500-661941 2.5e-06 77_[-2]_3 chrXIII:290547-291108 3.9e-06 22_[-2]_58 chrXI:140665-141484 3.9e-06 46_[+2]_34 chrX:115809-116192 3.9e-06 41_[+2]_39 chrV:487088-487620 3.9e-06 79_[+2]_1 chrIX:370246-370590 3.9e-06 47_[-2]_33 chrII:644945-645426 3.9e-06 30_[-2]_50 chrVI:226494-226945 4.5e-06 72_[+2]_8 chrXII:875162-876850 4.8e-06 50_[-2]_30 chrXVI:581839-582295 5.2e-06 43_[-2]_37 chrXIII:480397-480903 5.2e-06 74_[+2]_6 chrXIII:259040-259485 5.9e-06 8_[+2]_72 chrXV:854059-854827 9.1e-06 58_[+2]_22 chrV:434415-435131 9.1e-06 52_[-2]_28 chrIV:945481-946698 9.1e-06 60_[-2]_20 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCMYTAAACCACTHGGSCW MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF VCCMYTAAACCACTHGGSCW width=20 seqs=79 chrXII:732010-732282 ( 1) CGCCTTAAACCACTCGGCCA 1 chrX:617670-618158 ( 62) CGCCTTAAACCACTCGGCCA 1 chrXII:962857-963278 ( 12) CGCCTTAGACCACTCGGCCA 1 chrXI:84007-84417 ( 53) CGCCTTAGACCACTCGGCCA 1 chrX:424284-424740 ( 27) CGCCTTAGACCACTCGGCCA 1 chrVII:700187-701157 ( 60) CGCCTTAGACCACTCGGCCA 1 chrII:347410-347908 ( 1) CGCCTTAGACCACTCGGCCA 1 chrXVI:860132-860668 ( 28) ACCACTAAACCACTTGCGCT 1 chrXV:226539-226866 ( 11) ACCACTAAACCACTTGCGCT 1 chrX:396486-397031 ( 70) ACCACTAAACCACTTGCGCT 1 chrVII:845357-845960 ( 40) ACCACTAAACCACTTGCGCT 1 chrVI:162015-162393 ( 73) ACCACTAAACCACTTGCGCT 1 chrIV:83267-83824 ( 52) ACCACTAAACCACTTGCGCT 1 chrIII:142195-143337 ( 37) ACCACTAAACCACTTGCGCT 1 chrXII:92405-92710 ( 40) ACCACTAGACCACACGCCCT 1 chrXV:274329-274995 ( 68) TCGCCTTAACCACTCGGCCA 1 chrXII:167722-168305 ( 36) TCGCCTTAACCACTCGGCCA 1 chrVIII:132794-133359 ( 55) TCGCCTTAACCACTCGGCCA 1 chrV:86444-86780 ( 49) TCGCCTTAACCACTCGGCCA 1 chrIV:1150691-1151176 ( 32) TCGCCTTAACCACTCGGCCA 1 chrIII:227728-228210 ( 30) TCGCCTTAACCACTCGGCCA 1 chrXVI:810582-810881 ( 2) CGCCTTAACCAACTTGGCCA 1 chrXII:656838-657214 ( 12) CCGACTACGCCACACGCCCA 1 chrVII:730952-731370 ( 33) CGCCTTAACCAACTTGGCCA 1 chrVI:137269-137795 ( 51) CGCCTTAACCAACTTGGCCA 1 chrIII:127514-127889 ( 72) CGCCTTAACCAACTTGGCCA 1 chrVIII:145778-146785 ( 65) CCGACTACGCCACACGCCCT 1 chrVII:205303-205749 ( 52) CGCCTTAGACCGCTCGGCCA 1 chrXIV:546580-547702 ( 2) ACCACTAGACCACACGCCCG 1 chrXIII:747731-748240 ( 10) GCCATTACGCCACGCGAGCT 1 chrXV:353911-354310 ( 27) GCGCCTTACCAACTTGGCCA 1 chrVIII:115974-116305 ( 64) GCGCCTTACCAACTTGGCCA 1 chrIX:325420-326114 ( 38) GCGCCTTACCAACTTGGCCA 1 chrXIII:372192-372749 ( 80) CCGACTAGACCACGAAACCA 1 chrXI:307975-308520 ( 2) CCGACTAGACCACGAAACCA 1 chrVII:823351-823693 ( 9) CCGACTAGACCACGAAACCA 1 chrVII:412134-412588 ( 38) CCGACTAGACCACGAAACCA 1 chrXI:379460-379880 ( 59) CCGACTAGACCACGAAACCT 1 chrV:438370-439014 ( 57) CCGACTAGACCACGAAACCT 1 chrX:542775-543269 ( 45) CGCCTTAAACCAACTTGGCT 1 chrVI:210445-210957 ( 29) CGCCTTAAACCAACTTGGCT 1 chrVI:167224-167699 ( 34) CGCCTTAAACCAACTTGGCT 1 chrIII:123428-123802 ( 65) ACCTCTAGACCACACGCCCT 1 chrXIV:602081-602572 ( 43) TGCCTTAACCAACTGGGCCA 1 chrX:374178-374853 ( 12) ACCATTAAACTATCACGGAA 1 chrX:355117-355742 ( 76) ACCATTAAACTATCACGGAA 1 chrVII:544406-544928 ( 13) ACCATTAAACTATCACGGAA 1 chrVII:531395-531781 ( 71) ACCATTAAACTATCACGGAA 1 chrV:443038-443469 ( 46) TGCCTTAACCAACTGGGCCA 1 chrIV:568589-569343 ( 47) ACCATTAAACTATCACGGAA 1 chrII:405676-406196 ( 73) ACCATTAAACTATCACGGAA 1 chrII:197123-197841 ( 69) TGCCTTAACCAACTGGGCCA 1 chrXV:571394-572612 ( 4) ACCATTAAACTATCACGGAT 1 chrXII:426834-427514 ( 7) ACCATTAAACTATCACGGAT 1 chrX:204494-205060 ( 7) ACCATTAAACTATCACGGAT 1 chrIX:336100-336649 ( 78) ACCATTAAACTATCACGGAT 1 chrXI:46460-47090 ( 63) ACCACTTGGCCAAAAGGGCT 1 chrIV:1016938-1017520 ( 81) GCCGTTACACTACATCGGAT 1 chrXIII:808113-808529 ( 28) ACCACTACACTATAGGACCT 1 chrXV:110871-111202 ( 29) ACCACTACACTAACCGCCCG 1 chrXII:373992-374686 ( 73) ACGCCGTGACCATTGGGCCA 1 chrIV:619671-620309 ( 75) ACGCCGTGACCATTGGGCCA 1 chrXII:605170-605630 ( 64) ACCACTGAGCTACACGAGCA 1 chrVII:1004005-1004403 ( 61) ACCACTAAGCTAAGGAGGCA 1 chrVII:661500-661941 ( 78) ACCACTAAGCTAAGGAGGCA 1 chrXIII:290547-291108 ( 23) GCCGTTACACTATATCGGAT 1 chrXI:140665-141484 ( 47) GCCGTTACACTATATCGGAT 1 chrX:115809-116192 ( 42) GCCGTTACACTATATCGGAT 1 chrV:487088-487620 ( 80) GCCGTTACACTATATCGGAT 1 chrIX:370246-370590 ( 48) GCCGTTACACTATATCGGAT 1 chrII:644945-645426 ( 31) GCCGTTACACTATATCGGAT 1 chrVI:226494-226945 ( 73) CCGATTGCGCCAACAAGGCA 1 chrXII:875162-876850 ( 51) GGCACTTCCCCACGTGACAT 1 chrXVI:581839-582295 ( 44) CCGATTGCGCCAACAAGGCT 1 chrXIII:480397-480903 ( 75) CCGATTGCGCCAACAAGGCT 1 chrXIII:259040-259485 ( 9) ACCACTCGGCCAAGTTGCCA 1 chrXV:854059-854827 ( 59) GCGCTTCCACCACTTAGTAT 1 chrV:434415-435131 ( 53) GCGCTTCCACCACTTAGTAT 1 chrIV:945481-946698 ( 61) GCGCTTCCACCACTTAGTAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCMYTAAACCACTHGGSCW MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 38232 bayes= 8.33294 E= 9.8e-135 22 82 3 -146 -1295 203 37 -1295 -1295 188 77 -1295 65 112 -107 -463 -1295 133 -1295 76 -1295 -1295 -287 163 122 -188 -188 -93 72 37 37 -1295 120 -42 -42 -1295 -1295 243 -1295 -1295 -131 168 -1295 -17 165 -1295 -387 -1295 -117 174 -1295 -39 -73 21 -42 54 -31 58 -88 22 -83 21 158 -263 -131 -18 193 -1295 -1295 148 125 -305 -24 198 -1295 -1295 76 -1295 -287 50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCMYTAAACCACTHGGSCW MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 79 E= 9.8e-135 0.367089 0.329114 0.189873 0.113924 0.000000 0.759494 0.240506 0.000000 0.000000 0.683544 0.316456 0.000000 0.493671 0.405063 0.088608 0.012658 0.000000 0.468354 0.000000 0.531646 0.000000 0.000000 0.025316 0.974684 0.734177 0.050633 0.050633 0.164557 0.518987 0.240506 0.240506 0.000000 0.721519 0.139241 0.139241 0.000000 0.000000 1.000000 0.000000 0.000000 0.126582 0.594937 0.000000 0.278481 0.987342 0.000000 0.012658 0.000000 0.139241 0.620253 0.000000 0.240506 0.189873 0.215190 0.139241 0.455696 0.253165 0.278481 0.101266 0.367089 0.177215 0.215190 0.556962 0.050633 0.126582 0.164557 0.708861 0.000000 0.000000 0.518987 0.443038 0.037975 0.265823 0.734177 0.000000 0.000000 0.531646 0.000000 0.025316 0.443038 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCMYTAAACCACTHGGSCW MEME-2 regular expression -------------------------------------------------------------------------------- [AC][CG][CG][AC][TC]TA[ACG]AC[CT]A[CT][TC][TCA][GC]G[CG][CA][AT] -------------------------------------------------------------------------------- Time 400.00 secs. ******************************************************************************** ******************************************************************************** MOTIF CAYCCRTRCAYYDCA MEME-3 width = 15 sites = 59 llr = 658 E-value = 7.6e-041 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAYCCRTRCAYYDCA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 29:1:516:a:1316 pos.-specific C 7:699:1:a:66152 probability G 1::::4:3::::221 matrix T ::4:118:::43322 bits 2.4 2.2 * 1.9 ** * 1.7 ** * Relative 1.5 * ** ** Entropy 1.2 ***** *** (16.1 bits) 1.0 ***** *** 0.7 ***** ****** 0.5 ************ * 0.2 ************ ** 0.0 --------------- Multilevel CACCCATACACCACA consensus A T G G TTTTC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYCCRTRCAYYDCA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrXV:639215-639431 - 41 5.11e-10 ACTACTTTTA CACCCGTACACCACA CATACAACCG chrVII:371216-371490 + 53 2.68e-09 AAAATACCGG CACCCATGCACCTCA CACCGCCGCA chrX:690616-690866 + 25 3.63e-09 GTCATCAACA CACCCGTACACCACC ATGTGCGTTA chrXII:5577-5799 + 29 2.76e-08 ATATACACCA CACCCACACACCACA CCCACACCAC chrI:81864-82318 - 66 3.52e-08 ACTGTTGGTA CATCCGTGCACCTCC GCTAGATGAG chrXII:1028202-1028584 + 56 8.23e-08 GACAAAATAT CACCCATGCACCAAA ATGTATGGGT chrXV:1070692-1071351 - 36 1.39e-07 TTTAACAGTG CACCCGTGCATCATA CCTCATGCAA chrXIII:145870-146281 + 60 1.39e-07 CATTTTTGTA CATCCATACACCATA CACCATACAC chrV:110442-110982 + 17 2.15e-07 GTGACAAACA CACCCAGACACCTCA ATAGACAACA chrXII:932048-932507 - 29 2.58e-07 TACATCCGTA CATCCGTACATCTGA ACACAAAAAA chrXI:67742-68049 + 69 2.98e-07 CCCGTGCTGA AATCCGTGCACCGCA TCAAATTTTC chrXII:903378-903696 + 36 3.35e-07 AGAAGCATTG GACCCATGCACCACA TGCATTAGGA chrVIII:505811-506207 - 39 3.35e-07 GACAATTATG CATCCATACATTTCA CCCAGACATT chrXIV:783727-784314 - 64 3.78e-07 ACACACACCA CACCCACACACTACC CTAACACTAC chrVIII:125886-126332 + 44 4.36e-07 GACGTTAATG CATCCGTACACCTAC ATCTTTACAT chrXVI:281562-281928 + 72 4.96e-07 TACCTCTTTA CACCCTTACACTTCC TTTGATTACT chrIII:163436-163906 - 23 8.31e-07 TAAATTACCG CACCCACGCACCCAA CCGCGGCTGT chrXII:818504-819596 - 37 1.04e-06 AGGATTAGTT AACCCATACATTACA TGAAAATCAT chrVII:1000358-1000631 + 15 1.04e-06 ACTAGGATAG CACCCAAACACCTGC ATATTTGGAC chrV:270357-270683 + 18 1.04e-06 AAAAATTTAT CACCCATACATACCA CTAAATGTGT chrXII:673494-674560 + 78 1.18e-06 AATTTTTTTA GACCCATGCACCAGA TATTGATC chrIV:358053-358496 - 22 1.18e-06 GTGTACACAC CACCCATACATTATC TGACAAGGAA chrXI:382192-382486 + 17 1.47e-06 GCTGCTGTTG CATCCGGACATCACA CCCAACACAA chrVII:438560-438905 - 50 1.47e-06 TGGAACTTTA CATCTGTGCACCACA TATTTTTGAT chrIX:257356-257778 + 17 1.47e-06 TATGTGACGA CATCTGTACACCGCA AAGTTGTGAC chrXVI:378658-379013 - 52 1.63e-06 TCAGAGAAAA CATCCGTACATTCGA GTTCTCATTG chrX:160057-160271 + 61 1.63e-06 ATGTGTGACA CACCCATACCCCATA ATGTTGCACG chrXV:253812-254091 - 74 1.83e-06 AAACTTTTTT AATCCGTACACCGCG CGTATAAATC chrII:592884-593291 - 45 2.04e-06 TCTTTTCTTG CATCCATACATCTTT GAACTCCATA chrXV:79691-80163 - 68 2.49e-06 TCCATGTAAA CACCCGTACATATTA AATAAGTGAC chrXII:795579-797664 - 33 2.77e-06 TAATAACATC AATCCTTGCACCACC ATTGAACTTG chrXII:370618-370948 - 50 2.77e-06 GCACTTCGCC CACCCATGAACCACA CGGTTAGTCC chrXV:216225-216692 + 44 3.70e-06 TTTATCGGAA CATCCGAGCACCCGC GCCTTCCTCA chrX:90015-90454 + 78 3.70e-06 TGAACATTCT CACCCATACATGGCC TTGTTTTT chrIX:254197-254573 - 20 3.70e-06 CGAGCTTCCG CACCCACACATTCTA ATTGCCGCGC chrIV:1355716-1356029 - 14 4.10e-06 GTTAAAATTA CACCCATACATTTAT AGTATTTTTT chrIV:217091-217702 + 74 4.53e-06 ATGGATTCAG CACCCAAACATTTGA ATTTTTTTTC chrXV:979691-981320 + 1 4.95e-06 . AATCCTTGCACTTCA GCTTCCTCTA chrXI:457522-459141 + 55 4.95e-06 TTACATTATC AATCCTTGCACTTCA GCTTCCTCTA chrXVI:699746-700664 + 15 5.42e-06 CACAAGTGAT CCCCCACACACCATA GCTTCAAAAT chrXII:732010-732282 - 62 6.49e-06 AAGGGATTCG AACCCTTGCATCCGA AGATATCAGA chrXIV:494926-495809 - 75 7.73e-06 TGACATATTC AATCCGTACATTATA CACACCCAAA chrXII:645850-646053 + 46 7.73e-06 GTTCCACCCA CACCCATTCACCCGT CGGGCGAAAT chrXII:241605-242018 + 47 7.73e-06 TCCCTTTTTA CATCCGTACATATAA AATGTAAACC chrXII:262062-263947 + 12 8.43e-06 TTTAATAATA CATCCATACATTTAT GTTAATTTGT chrIV:434118-435101 + 61 9.98e-06 TTACATTATC AATCCTTGCATTTCA GCTTCCATTA chrVII:788304-788746 - 51 1.27e-05 TTCCTTACAA CATCCGTGCATACTC TAAACCCAAT chrXII:424137-424504 + 39 1.38e-05 TAAGTCGCTA CACACGTACATTGCT GTGGTGCACG chrV:354791-355201 - 76 1.49e-05 CTCCTAACCC CATACATACACTGTA TGATGTCAAA chrIV:321615-321946 + 70 1.49e-05 CATACCTTTA CCTCCGTACACCAAT CTTTATTTTT chrIV:411235-411675 + 31 1.74e-05 ACAAATCAAA CACCCACACCCCGGG CACCCAAAGT chrXV:113189-113882 + 5 2.02e-05 TATC GATCCTTGCATTTCA GCTTCCTCTA chrII:165094-165411 + 56 2.02e-05 TTACGAATCT AGCCCATACACCGCG TTAGAGCACT chrXIV:241379-241792 + 29 2.34e-05 CAACATCCAG CACCTAAACACCATC AATACACGTT chrV:361981-362507 + 13 2.51e-05 TAATGTACAT AATCTATGCACCGCT TAAAAGTTTA chrV:61082-62599 - 72 2.90e-05 TTATTTTTTT AATCCATTCATTTCA TGAGCAACTG chrIV:1400948-1401939 + 41 3.11e-05 AATCATTTTC CACCCACACATATAT TACCCTTTTT chrII:88970-90302 - 19 3.11e-05 TTCGGTCCTA CACACGAGCATCGCT GGGAAAGCTT chrXIV:725465-726362 + 57 3.57e-05 ATTTCCTTAC CACACGTACATTGGG TGCTCTACTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYCCRTRCAYYDCA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:639215-639431 5.1e-10 40_[-3]_45 chrVII:371216-371490 2.7e-09 52_[+3]_33 chrX:690616-690866 3.6e-09 24_[+3]_61 chrXII:5577-5799 2.8e-08 28_[+3]_57 chrI:81864-82318 3.5e-08 65_[-3]_20 chrXII:1028202-1028584 8.2e-08 55_[+3]_30 chrXV:1070692-1071351 1.4e-07 35_[-3]_50 chrXIII:145870-146281 1.4e-07 59_[+3]_26 chrV:110442-110982 2.2e-07 16_[+3]_69 chrXII:932048-932507 2.6e-07 28_[-3]_57 chrXI:67742-68049 3e-07 68_[+3]_17 chrXII:903378-903696 3.3e-07 35_[+3]_50 chrVIII:505811-506207 3.3e-07 38_[-3]_47 chrXIV:783727-784314 3.8e-07 63_[-3]_22 chrVIII:125886-126332 4.4e-07 43_[+3]_42 chrXVI:281562-281928 5e-07 71_[+3]_14 chrIII:163436-163906 8.3e-07 22_[-3]_63 chrXII:818504-819596 1e-06 36_[-3]_49 chrVII:1000358-1000631 1e-06 14_[+3]_71 chrV:270357-270683 1e-06 17_[+3]_68 chrXII:673494-674560 1.2e-06 77_[+3]_8 chrIV:358053-358496 1.2e-06 21_[-3]_64 chrXI:382192-382486 1.5e-06 16_[+3]_69 chrVII:438560-438905 1.5e-06 49_[-3]_36 chrIX:257356-257778 1.5e-06 16_[+3]_69 chrXVI:378658-379013 1.6e-06 51_[-3]_34 chrX:160057-160271 1.6e-06 60_[+3]_25 chrXV:253812-254091 1.8e-06 73_[-3]_12 chrII:592884-593291 2e-06 44_[-3]_41 chrXV:79691-80163 2.5e-06 67_[-3]_18 chrXII:795579-797664 2.8e-06 32_[-3]_53 chrXII:370618-370948 2.8e-06 49_[-3]_36 chrXV:216225-216692 3.7e-06 43_[+3]_42 chrX:90015-90454 3.7e-06 77_[+3]_8 chrIX:254197-254573 3.7e-06 19_[-3]_66 chrIV:1355716-1356029 4.1e-06 13_[-3]_72 chrIV:217091-217702 4.5e-06 73_[+3]_12 chrXV:979691-981320 5e-06 [+3]_85 chrXI:457522-459141 5e-06 54_[+3]_31 chrXVI:699746-700664 5.4e-06 14_[+3]_71 chrXII:732010-732282 6.5e-06 61_[-3]_24 chrXIV:494926-495809 7.7e-06 74_[-3]_11 chrXII:645850-646053 7.7e-06 45_[+3]_40 chrXII:241605-242018 7.7e-06 46_[+3]_39 chrXII:262062-263947 8.4e-06 11_[+3]_74 chrIV:434118-435101 1e-05 60_[+3]_25 chrVII:788304-788746 1.3e-05 50_[-3]_35 chrXII:424137-424504 1.4e-05 38_[+3]_47 chrV:354791-355201 1.5e-05 75_[-3]_10 chrIV:321615-321946 1.5e-05 69_[+3]_16 chrIV:411235-411675 1.7e-05 30_[+3]_55 chrXV:113189-113882 2e-05 4_[+3]_81 chrII:165094-165411 2e-05 55_[+3]_30 chrXIV:241379-241792 2.3e-05 28_[+3]_57 chrV:361981-362507 2.5e-05 12_[+3]_73 chrV:61082-62599 2.9e-05 71_[-3]_14 chrIV:1400948-1401939 3.1e-05 40_[+3]_45 chrII:88970-90302 3.1e-05 18_[-3]_67 chrXIV:725465-726362 3.6e-05 56_[+3]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYCCRTRCAYYDCA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAYCCRTRCAYYDCA width=15 seqs=59 chrXV:639215-639431 ( 41) CACCCGTACACCACA 1 chrVII:371216-371490 ( 53) CACCCATGCACCTCA 1 chrX:690616-690866 ( 25) CACCCGTACACCACC 1 chrXII:5577-5799 ( 29) CACCCACACACCACA 1 chrI:81864-82318 ( 66) CATCCGTGCACCTCC 1 chrXII:1028202-1028584 ( 56) CACCCATGCACCAAA 1 chrXV:1070692-1071351 ( 36) CACCCGTGCATCATA 1 chrXIII:145870-146281 ( 60) CATCCATACACCATA 1 chrV:110442-110982 ( 17) CACCCAGACACCTCA 1 chrXII:932048-932507 ( 29) CATCCGTACATCTGA 1 chrXI:67742-68049 ( 69) AATCCGTGCACCGCA 1 chrXII:903378-903696 ( 36) GACCCATGCACCACA 1 chrVIII:505811-506207 ( 39) CATCCATACATTTCA 1 chrXIV:783727-784314 ( 64) CACCCACACACTACC 1 chrVIII:125886-126332 ( 44) CATCCGTACACCTAC 1 chrXVI:281562-281928 ( 72) CACCCTTACACTTCC 1 chrIII:163436-163906 ( 23) CACCCACGCACCCAA 1 chrXII:818504-819596 ( 37) AACCCATACATTACA 1 chrVII:1000358-1000631 ( 15) CACCCAAACACCTGC 1 chrV:270357-270683 ( 18) CACCCATACATACCA 1 chrXII:673494-674560 ( 78) GACCCATGCACCAGA 1 chrIV:358053-358496 ( 22) CACCCATACATTATC 1 chrXI:382192-382486 ( 17) CATCCGGACATCACA 1 chrVII:438560-438905 ( 50) CATCTGTGCACCACA 1 chrIX:257356-257778 ( 17) CATCTGTACACCGCA 1 chrXVI:378658-379013 ( 52) CATCCGTACATTCGA 1 chrX:160057-160271 ( 61) CACCCATACCCCATA 1 chrXV:253812-254091 ( 74) AATCCGTACACCGCG 1 chrII:592884-593291 ( 45) CATCCATACATCTTT 1 chrXV:79691-80163 ( 68) CACCCGTACATATTA 1 chrXII:795579-797664 ( 33) AATCCTTGCACCACC 1 chrXII:370618-370948 ( 50) CACCCATGAACCACA 1 chrXV:216225-216692 ( 44) CATCCGAGCACCCGC 1 chrX:90015-90454 ( 78) CACCCATACATGGCC 1 chrIX:254197-254573 ( 20) CACCCACACATTCTA 1 chrIV:1355716-1356029 ( 14) CACCCATACATTTAT 1 chrIV:217091-217702 ( 74) CACCCAAACATTTGA 1 chrXV:979691-981320 ( 1) AATCCTTGCACTTCA 1 chrXI:457522-459141 ( 55) AATCCTTGCACTTCA 1 chrXVI:699746-700664 ( 15) CCCCCACACACCATA 1 chrXII:732010-732282 ( 62) AACCCTTGCATCCGA 1 chrXIV:494926-495809 ( 75) AATCCGTACATTATA 1 chrXII:645850-646053 ( 46) CACCCATTCACCCGT 1 chrXII:241605-242018 ( 47) CATCCGTACATATAA 1 chrXII:262062-263947 ( 12) CATCCATACATTTAT 1 chrIV:434118-435101 ( 61) AATCCTTGCATTTCA 1 chrVII:788304-788746 ( 51) CATCCGTGCATACTC 1 chrXII:424137-424504 ( 39) CACACGTACATTGCT 1 chrV:354791-355201 ( 76) CATACATACACTGTA 1 chrIV:321615-321946 ( 70) CCTCCGTACACCAAT 1 chrIV:411235-411675 ( 31) CACCCACACCCCGGG 1 chrXV:113189-113882 ( 5) GATCCTTGCATTTCA 1 chrII:165094-165411 ( 56) AGCCCATACACCGCG 1 chrXIV:241379-241792 ( 29) CACCTAAACACCATC 1 chrV:361981-362507 ( 13) AATCTATGCACCGCT 1 chrV:61082-62599 ( 72) AATCCATTCATTTCA 1 chrIV:1400948-1401939 ( 41) CACCCACACATATAT 1 chrII:88970-90302 ( 19) CACACGAGCATCGCT 1 chrXIV:725465-726362 ( 57) CACACGTACATTGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYCCRTRCAYYDCA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 40592 bayes= 10.6874 E= 7.6e-041 -63 200 -187 -1253 159 -245 -345 -1253 -1253 159 -1253 49 -221 233 -1253 -1253 -1253 233 -1253 -221 74 -1253 94 -140 -189 -65 -245 128 100 -1253 87 -321 -421 240 -1253 -1253 162 -245 -1253 -1253 -1253 159 -1253 49 -189 163 -345 4 11 -45 0 11 -121 140 -13 -63 87 13 -145 -104 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYCCRTRCAYYDCA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 59 E= 7.6e-041 0.203390 0.745763 0.050847 0.000000 0.949153 0.033898 0.016949 0.000000 0.000000 0.559322 0.000000 0.440678 0.067797 0.932203 0.000000 0.000000 0.000000 0.932203 0.000000 0.067797 0.525424 0.000000 0.355932 0.118644 0.084746 0.118644 0.033898 0.762712 0.627119 0.000000 0.338983 0.033898 0.016949 0.983051 0.000000 0.000000 0.966102 0.033898 0.000000 0.000000 0.000000 0.559322 0.000000 0.440678 0.084746 0.576271 0.016949 0.322034 0.338983 0.135593 0.186441 0.338983 0.135593 0.491525 0.169492 0.203390 0.576271 0.203390 0.067797 0.152542 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYCCRTRCAYYDCA MEME-3 regular expression -------------------------------------------------------------------------------- [CA]A[CT]CC[AG]T[AG]CA[CT][CT][AT][CT][AC] -------------------------------------------------------------------------------- Time 586.19 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:81864-82318 2.99e-05 65_[-3(3.52e-08)]_20 chrI:138860-139338 5.92e-01 100 chrI:166177-166655 9.01e-01 100 chrII:6778-7102 9.57e-01 100 chrII:9462-10399 1.06e-01 100 chrII:36225-37163 8.57e-01 100 chrII:44664-45363 8.15e-01 100 chrII:60809-61602 9.95e-01 100 chrII:87966-88550 2.16e-01 100 chrII:88970-90302 1.88e-02 18_[-3(3.11e-05)]_67 chrII:165094-165411 4.42e-03 55_[+3(2.02e-05)]_30 chrII:167875-168242 6.94e-02 100 chrII:181040-181679 5.22e-01 100 chrII:197123-197841 1.97e-03 68_[-2(7.19e-07)]_12 chrII:226974-227371 6.34e-02 100 chrII:265683-265849 9.01e-01 100 chrII:266217-266862 8.08e-01 100 chrII:326481-327093 3.01e-08 59_[+1(4.15e-11)]_12 chrII:332287-333028 6.09e-01 100 chrII:347410-347908 6.32e-11 [-2(1.70e-10)]_28_[+1(7.46e-08)]_23 chrII:350545-351017 8.76e-01 100 chrII:405676-406196 7.86e-11 29_[-1(2.54e-11)]_14_[-2(7.19e-07)]_\ 8 chrII:415496-416275 6.45e-01 100 chrII:477028-477758 5.39e-01 100 chrII:592884-593291 4.74e-03 27_[-3(2.90e-05)]_2_[-3(2.04e-06)]_\ 41 chrII:604075-606748 5.56e-01 100 chrII:644945-645426 3.26e-10 30_[-2(3.90e-06)]_19_[-1(2.54e-11)]_\ 2 chrIII:129-2049 8.45e-02 100 chrIII:13952-15353 2.59e-01 100 chrIII:58381-58992 1.02e-01 100 chrIII:90786-91091 2.53e-01 100 chrIII:123428-123802 7.96e-16 16_[+1(5.78e-16)]_19_[+2(6.51e-07)]_\ 16 chrIII:127514-127889 5.09e-04 71_[-2(4.82e-08)]_9 chrIII:142195-143337 2.95e-05 36_[+2(2.06e-09)]_44 chrIII:149729-150127 1.96e-01 100 chrIII:150664-152242 2.59e-02 76_[-2(2.32e-05)]_4 chrIII:163436-163906 2.24e-03 22_[-3(8.31e-07)]_23_[-3(9.59e-05)]_\ 25 chrIII:168078-168559 7.53e-07 37_[+1(1.05e-10)]_34 chrIII:177041-178819 6.97e-01 100 chrIII:227728-228210 7.07e-05 29_[-2(1.05e-08)]_51 chrIII:295343-295975 8.89e-01 100 chrIII:308569-308984 3.32e-01 100 chrIV:83267-83824 4.45e-06 51_[-2(2.06e-09)]_29 chrIV:117146-118228 9.92e-01 100 chrIV:129175-129384 1.49e-01 100 chrIV:129594-131228 4.93e-01 100 chrIV:217091-217702 1.26e-03 73_[+3(4.53e-06)]_12 chrIV:220949-221258 7.74e-01 100 chrIV:221556-222367 7.50e-01 100 chrIV:229363-230425 9.15e-01 100 chrIV:306690-309427 6.30e-01 100 chrIV:321615-321946 2.79e-02 69_[+3(1.49e-05)]_16 chrIV:323073-323534 8.39e-01 100 chrIV:340553-343890 7.22e-01 100 chrIV:358053-358496 3.06e-03 21_[-3(1.18e-06)]_64 chrIV:359045-359774 9.42e-01 100 chrIV:410192-410459 8.70e-01 100 chrIV:411235-411675 2.56e-03 30_[+3(1.74e-05)]_55 chrIV:434118-435101 1.06e-02 60_[+3(9.98e-06)]_25 chrIV:437537-438248 9.36e-01 100 chrIV:488466-488991 4.26e-01 100 chrIV:490850-491253 6.29e-01 100 chrIV:519656-519951 3.00e-04 44_[+1(7.46e-08)]_27 chrIV:520235-521179 8.08e-01 100 chrIV:538856-539262 8.64e-02 100 chrIV:568589-569343 7.86e-11 3_[-1(2.54e-11)]_14_[-2(7.19e-07)]_\ 34 chrIV:578719-580370 5.69e-01 100 chrIV:601334-601757 5.78e-01 100 chrIV:619671-620309 4.87e-09 33_[+1(3.73e-10)]_12_[+2(1.94e-06)]_\ 6 chrIV:667758-668564 2.30e-01 100 chrIV:757510-758406 3.03e-01 100 chrIV:802558-802838 5.71e-01 100 chrIV:835839-836318 1.10e-01 100 chrIV:884284-884739 1.44e-01 100 chrIV:945481-946698 2.11e-02 60_[-2(9.15e-06)]_20 chrIV:992679-993443 3.10e-01 100 chrIV:1013421-1013984 8.86e-01 100 chrIV:1016938-1017520 2.40e-11 32_[+1(4.47e-12)]_19_[+2(1.26e-06)] chrIV:1075242-1075774 7.54e-09 18_[+1(8.96e-12)]_53 chrIV:1095148-1095700 1.11e-07 [+1(2.75e-10)]_71 chrIV:1150691-1151176 5.71e-06 31_[+2(1.05e-08)]_49 chrIV:1175579-1176074 2.07e-01 100 chrIV:1201215-1201952 9.09e-01 100 chrIV:1300722-1301333 6.35e-01 100 chrIV:1305377-1306419 6.80e-01 100 chrIV:1352039-1353255 7.87e-01 100 chrIV:1355716-1356029 3.31e-03 13_[-3(4.10e-06)]_9_[-3(8.43e-06)]_\ 48 chrIV:1359314-1360038 3.66e-01 100 chrIV:1400948-1401939 3.55e-02 25_[+3(7.17e-05)]_[+3(3.11e-05)]_45 chrIV:1450618-1451256 6.36e-01 100 chrIV:1461089-1461845 6.59e-01 100 chrIX:68166-69305 1.19e-01 100 chrIX:99621-100315 2.97e-01 100 chrIX:128188-129869 4.23e-01 100 chrIX:174882-175393 3.92e-01 100 chrIX:183270-184020 6.98e-01 100 chrIX:197169-198383 6.90e-01 100 chrIX:210681-211311 1.27e-01 100 chrIX:248528-249018 1.59e-01 100 chrIX:254197-254573 5.51e-03 19_[-3(3.70e-06)]_66 chrIX:257356-257778 5.99e-03 16_[+3(1.47e-06)]_69 chrIX:300039-300677 8.66e-01 100 chrIX:315566-317623 2.95e-01 100 chrIX:323983-324554 7.78e-01 100 chrIX:325420-326114 4.58e-10 37_[-2(2.49e-07)]_12_[-1(3.37e-10)]_\ 2 chrIX:336100-336649 1.07e-08 29_[+1(2.32e-09)]_19_[+2(8.72e-07)]_\ 3 chrIX:370246-370590 5.20e-03 47_[-2(3.90e-06)]_33 chrIX:389453-390877 8.29e-02 100 chrV:6184-6786 3.26e-01 100 chrV:53514-54294 2.34e-01 100 chrV:61082-62599 1.54e-02 71_[-3(2.90e-05)]_14 chrV:69137-69319 3.94e-02 100 chrV:85119-86248 1.42e-01 100 chrV:86444-86780 1.44e-04 48_[-2(1.05e-08)]_32 chrV:99831-100274 9.46e-01 100 chrV:110442-110982 1.82e-03 16_[+3(2.15e-07)]_69 chrV:117613-118300 6.09e-01 100 chrV:130784-131374 6.58e-08 22_[-2(7.63e-05)]_15_[+1(6.07e-10)]_\ 14 chrV:135146-136191 7.24e-01 100 chrV:138471-140913 7.17e-01 100 chrV:176220-177464 9.22e-04 9_[+2(2.32e-05)]_71 chrV:249237-249532 6.09e-01 100 chrV:249724-250775 9.88e-01 100 chrV:251270-251449 4.51e-01 100 chrV:270357-270683 5.76e-03 17_[+3(1.04e-06)]_24_[+3(2.34e-05)]_\ 29 chrV:287763-288739 3.12e-01 100 chrV:305771-306932 1.02e-01 100 chrV:311754-312308 1.25e-07 46_[+1(2.24e-11)]_25 chrV:354791-355201 1.61e-09 25_[-1(2.54e-11)]_21_[-3(1.49e-05)]_\ 10 chrV:361981-362507 6.04e-02 12_[+3(2.51e-05)]_73 chrV:396068-397564 4.39e-01 100 chrV:423087-424329 2.56e-01 100 chrV:430977-432090 5.58e-01 100 chrV:434415-435131 1.33e-02 52_[-2(9.15e-06)]_28 chrV:435367-435933 3.25e-01 100 chrV:438370-439014 1.87e-03 56_[-2(3.88e-07)]_24 chrV:441702-442684 6.00e-01 100 chrV:443038-443469 8.37e-10 3_[+1(1.63e-10)]_13_[+2(7.19e-07)]_\ 35 chrV:469253-469788 5.63e-07 26_[-1(2.54e-11)]_45 chrV:487088-487620 3.26e-10 31_[+1(2.54e-11)]_19_[+2(3.90e-06)]_\ 1 chrV:550888-551590 9.79e-01 100 chrVI:4513-4759 8.08e-01 100 chrVI:64148-65535 1.36e-01 100 chrVI:95468-95928 1.47e-01 100 chrVI:101375-101593 8.98e-09 10_[-1(4.38e-13)]_61 chrVI:137269-137795 3.73e-10 8_[+1(9.69e-10)]_13_[+2(4.82e-08)]_\ 30 chrVI:157905-158460 8.67e-01 100 chrVI:162015-162393 2.77e-05 72_[-2(2.06e-09)]_8 chrVI:167224-167699 3.75e-03 33_[-2(6.51e-07)]_47 chrVI:180658-181267 6.89e-09 66_[+1(3.87e-12)]_5 chrVI:191202-191753 2.47e-01 100 chrVI:210445-210957 3.59e-03 28_[+2(6.51e-07)]_52 chrVI:221356-222244 1.31e-01 100 chrVI:222889-223070 3.78e-01 100 chrVI:223271-225098 9.99e-01 100 chrVI:226494-226945 6.25e-09 23_[+1(8.84e-10)]_20_[+2(4.49e-06)]_\ 8 chrVII:788-2112 5.09e-01 100 chrVII:9994-10563 2.38e-01 100 chrVII:110370-110779 9.29e-01 100 chrVII:115003-115716 5.23e-01 100 chrVII:121966-122775 6.52e-01 100 chrVII:148428-149569 9.98e-01 100 chrVII:185135-185906 7.73e-01 100 chrVII:205303-205749 3.19e-04 51_[-2(1.07e-07)]_29 chrVII:254139-254738 5.72e-01 100 chrVII:277002-278272 9.36e-01 100 chrVII:287079-287858 3.90e-02 100 chrVII:310463-312272 9.69e-01 100 chrVII:318935-320144 4.52e-02 78_[-2(2.65e-05)]_2 chrVII:328370-329325 9.93e-01 100 chrVII:364923-366697 6.79e-01 100 chrVII:371216-371490 5.31e-06 52_[+3(2.68e-09)]_33 chrVII:405470-405824 5.83e-01 100 chrVII:412134-412588 1.05e-03 37_[+2(3.12e-07)]_43 chrVII:422722-423394 8.09e-01 100 chrVII:438560-438905 7.32e-03 49_[-3(1.47e-06)]_8_[-3(7.73e-06)]_\ 13 chrVII:440642-441163 4.57e-01 100 chrVII:531395-531781 4.11e-04 70_[-2(7.19e-07)]_10 chrVII:533406-535202 8.29e-01 100 chrVII:541715-542156 1.91e-07 2_[-1(2.54e-11)]_69 chrVII:544406-544928 2.87e-03 12_[+2(7.19e-07)]_68 chrVII:555169-556706 7.88e-01 100 chrVII:561408-561652 8.38e-01 100 chrVII:648814-649354 1.93e-01 100 chrVII:661500-661941 9.16e-04 77_[-2(2.47e-06)]_3 chrVII:700187-701157 1.85e-06 59_[-2(1.70e-10)]_21 chrVII:706933-707188 9.31e-01 100 chrVII:726377-728204 7.88e-01 100 chrVII:730952-731370 3.73e-10 32_[-2(4.82e-08)]_13_[-1(9.69e-10)]_\ 6 chrVII:736185-737703 2.80e-01 100 chrVII:738582-739511 4.29e-01 100 chrVII:774134-774711 1.02e-05 15_[-1(6.07e-10)]_56 chrVII:779312-779699 9.32e-01 100 chrVII:788304-788746 2.03e-02 50_[-3(1.27e-05)]_35 chrVII:794085-794508 9.46e-01 100 chrVII:823351-823693 6.19e-11 8_[-2(3.12e-07)]_21_[-1(2.54e-11)]_\ 22 chrVII:828479-828989 2.25e-07 43_[+1(2.54e-11)]_28 chrVII:845357-845960 2.18e-05 39_[-2(2.06e-09)]_41 chrVII:856730-857659 8.52e-01 100 chrVII:875992-877139 9.94e-01 100 chrVII:878601-879129 5.06e-01 100 chrVII:882794-883929 2.67e-01 100 chrVII:930240-931165 9.39e-01 100 chrVII:1000358-1000631 3.15e-03 14_[+3(1.04e-06)]_71 chrVII:1004005-1004403 8.37e-03 60_[-2(2.47e-06)]_20 chrVIII:62529-63002 9.11e-02 100 chrVIII:74873-75893 8.39e-01 100 chrVIII:103837-104359 2.72e-01 100 chrVIII:115974-116305 4.58e-10 22_[+1(3.37e-10)]_12_[+2(2.49e-07)]_\ 17 chrVIII:125886-126332 3.26e-03 43_[+3(4.36e-07)]_42 chrVIII:132794-133359 4.78e-06 54_[+2(1.05e-08)]_26 chrVIII:134052-134853 9.16e-01 100 chrVIII:145778-146785 1.15e-10 15_[+1(6.07e-10)]_20_[+2(6.35e-08)]_\ 16 chrVIII:148990-149390 6.16e-01 100 chrVIII:174780-176080 4.31e-01 100 chrVIII:212117-212391 8.26e-01 100 chrVIII:237699-238091 4.73e-07 7_[+1(1.27e-09)]_64 chrVIII:296693-297622 7.98e-01 100 chrVIII:358272-358792 4.73e-07 [+1(1.27e-09)]_71 chrVIII:381492-383393 6.03e-02 20_[-2(1.93e-05)]_60 chrVIII:388668-389206 5.08e-09 10_[+1(4.38e-13)]_61 chrVIII:466908-467345 5.95e-01 100 chrVIII:475476-475904 8.92e-08 70_[+1(8.96e-12)]_1 chrVIII:505811-506207 1.33e-03 38_[-3(3.35e-07)]_47 chrVIII:555756-556452 7.49e-01 100 chrVIII:556951-557191 8.01e-01 100 chrX:59000-59466 9.01e-01 100 chrX:73367-74588 7.61e-01 100 chrX:75347-76423 7.66e-01 100 chrX:90015-90454 1.19e-02 77_[+3(3.70e-06)]_8 chrX:115440-115636 2.31e-01 100 chrX:115809-116192 5.20e-03 41_[+2(3.90e-06)]_39 chrX:157422-157917 1.99e-01 100 chrX:160057-160271 5.37e-03 18_[+3(9.07e-05)]_27_[+3(1.63e-06)]_\ 25 chrX:196675-197518 6.83e-02 100 chrX:204494-205060 1.07e-08 6_[-2(8.72e-07)]_19_[-1(2.32e-09)]_\ 26 chrX:215584-217301 9.43e-01 100 chrX:227763-228631 4.90e-01 100 chrX:233700-235741 5.33e-01 100 chrX:354165-354844 5.04e-01 100 chrX:355117-355742 7.86e-11 32_[-1(2.54e-11)]_14_[-2(7.19e-07)]_\ 5 chrX:374178-374853 7.86e-11 11_[+2(7.19e-07)]_14_[+1(2.54e-11)]_\ 26 chrX:378065-378572 8.29e-01 100 chrX:390918-392120 1.61e-02 100 chrX:396486-397031 1.00e-13 22_[+1(3.87e-12)]_18_[+2(2.06e-09)]_\ 11 chrX:414711-416699 4.98e-01 100 chrX:421955-422206 5.22e-01 100 chrX:422647-423286 2.62e-06 59_[-1(3.23e-09)]_12 chrX:424284-424740 6.90e-07 26_[+2(1.70e-10)]_54 chrX:517709-518121 1.90e-01 100 chrX:523841-524453 6.35e-01 100 chrX:531490-532328 7.81e-08 5_[-1(3.87e-12)]_66 chrX:538523-538736 3.58e-06 13_[-1(5.52e-10)]_58 chrX:540720-541974 4.20e-01 100 chrX:542775-543269 3.88e-03 44_[+2(6.51e-07)]_36 chrX:607496-609014 9.78e-01 100 chrX:617670-618158 7.56e-07 61_[-2(1.00e-10)]_19 chrX:650892-651613 8.91e-01 100 chrX:663672-664345 4.31e-01 100 chrX:684528-685304 8.06e-01 100 chrX:690616-690866 2.90e-05 24_[+3(3.63e-09)]_61 chrX:703010-703676 3.14e-01 100 chrX:745087-745546 4.99e-01 100 chrXI:764-1105 4.60e-01 100 chrXI:46460-47090 3.48e-10 14_[+1(3.37e-10)]_19_[+2(9.58e-07)]_\ 18 chrXI:67742-68049 3.98e-04 68_[+3(2.98e-07)]_17 chrXI:74424-75066 7.40e-01 100 chrXI:84007-84417 4.25e-07 52_[-2(1.70e-10)]_28 chrXI:99722-99965 9.78e-02 100 chrXI:103914-104807 3.45e-01 100 chrXI:108358-109306 8.36e-01 100 chrXI:140665-141484 5.20e-03 46_[+2(3.90e-06)]_34 chrXI:158202-159597 9.87e-01 100 chrXI:162438-162768 9.24e-01 100 chrXI:219617-220100 4.17e-01 100 chrXI:302683-303277 8.24e-06 59_[-1(2.74e-09)]_12 chrXI:307975-308520 1.39e-03 1_[+2(3.12e-07)]_79 chrXI:312570-314009 3.90e-01 100 chrXI:322453-322627 1.21e-01 100 chrXI:333455-334835 2.46e-01 100 chrXI:379460-379880 6.68e-04 58_[-2(3.88e-07)]_22 chrXI:382192-382486 2.53e-03 16_[+3(1.47e-06)]_41_[+3(8.58e-05)]_\ 13 chrXI:414100-414594 9.57e-02 100 chrXI:430896-431661 7.77e-01 100 chrXI:457522-459141 7.61e-03 54_[+3(4.95e-06)]_31 chrXI:490713-491353 1.69e-06 23_[-1(3.73e-10)]_48 chrXI:513175-513516 7.17e-06 41_[+1(2.32e-09)]_30 chrXI:517798-518067 9.92e-01 100 chrXI:578687-579445 8.20e-07 10_[-1(1.06e-09)]_61 chrXI:617689-619350 6.41e-01 100 chrXII:53-222 5.24e-01 100 chrXII:5577-5799 2.57e-05 28_[+3(2.76e-08)]_15_[+3(1.63e-06)]_\ 2_[+3(2.77e-06)]_10 chrXII:48688-49286 9.77e-01 100 chrXII:92405-92710 4.29e-06 39_[-2(7.48e-09)]_41 chrXII:167722-168305 1.05e-04 35_[+2(1.05e-08)]_45 chrXII:198345-199713 7.89e-01 100 chrXII:214672-215066 2.35e-07 68_[+1(2.24e-11)]_3 chrXII:241605-242018 1.44e-02 46_[+3(7.73e-06)]_6_[+3(2.51e-05)]_\ 18 chrXII:262062-263947 7.39e-03 11_[+3(8.43e-06)]_74 chrXII:366009-366785 5.21e-01 100 chrXII:368658-370249 8.63e-01 100 chrXII:370618-370948 5.83e-04 49_[-3(2.77e-06)]_36 chrXII:373992-374686 2.14e-03 72_[-2(1.94e-06)]_8 chrXII:424137-424504 8.58e-03 38_[+3(1.38e-05)]_47 chrXII:426834-427514 1.07e-08 6_[-2(8.72e-07)]_19_[-1(2.32e-09)]_\ 26 chrXII:448519-449025 7.89e-01 100 chrXII:459599-460162 4.85e-01 100 chrXII:460430-460731 9.06e-02 100 chrXII:498302-499659 5.63e-01 100 chrXII:515339-516933 1.79e-01 100 chrXII:521689-522449 9.70e-01 100 chrXII:592018-592715 6.39e-01 100 chrXII:605170-605630 1.37e-03 63_[+2(2.28e-06)]_17 chrXII:628159-628972 7.09e-01 100 chrXII:636727-639866 1.45e-01 100 chrXII:645850-646053 1.27e-04 45_[+3(7.73e-06)]_40 chrXII:656838-657214 2.50e-04 11_[+2(4.82e-08)]_69 chrXII:673494-674560 1.41e-03 77_[+3(1.18e-06)]_8 chrXII:713134-713910 5.45e-01 100 chrXII:732010-732282 7.23e-10 [-2(1.00e-10)]_41_[-3(6.49e-06)]_24 chrXII:734450-735395 6.45e-01 100 chrXII:780797-781888 3.56e-01 100 chrXII:783943-784509 7.59e-02 100 chrXII:793736-793993 6.51e-01 100 chrXII:794183-795369 8.08e-01 100 chrXII:795579-797664 3.77e-03 32_[-3(2.77e-06)]_12_[-3(3.57e-05)]_\ 26 chrXII:818504-819596 6.93e-03 36_[-3(1.04e-06)]_49 chrXII:875162-876850 1.34e-03 50_[-2(4.82e-06)]_30 chrXII:897625-898936 3.36e-01 100 chrXII:903378-903696 2.33e-04 35_[+3(3.35e-07)]_50 chrXII:921692-922767 5.89e-01 100 chrXII:924485-924845 2.99e-01 100 chrXII:932048-932507 2.70e-03 28_[-3(2.58e-07)]_1_[-3(2.04e-06)]_\ 10_[-3(5.94e-06)]_16 chrXII:962857-963278 1.59e-08 11_[+2(1.70e-10)]_69 chrXII:975787-976153 9.81e-06 67_[+1(9.69e-10)]_4 chrXII:1018143-1019424 3.95e-01 100 chrXII:1028202-1028584 1.68e-04 55_[+3(8.23e-08)]_30 chrXII:1051731-1052219 8.08e-01 100 chrXII:1064002-1064305 8.93e-01 100 chrXIII:91522-92344 6.04e-01 100 chrXIII:131435-132117 9.20e-01 100 chrXIII:145870-146281 3.84e-04 59_[+3(1.39e-07)]_26 chrXIII:168250-169003 7.66e-01 100 chrXIII:195936-196302 5.08e-09 3_[+1(4.38e-13)]_68 chrXIII:224062-224531 3.73e-01 100 chrXIII:224976-226649 8.69e-01 100 chrXIII:259040-259485 5.31e-05 [+2(1.05e-08)]_80 chrXIII:290547-291108 3.26e-10 22_[-2(3.90e-06)]_19_[-1(2.54e-11)]_\ 10 chrXIII:296764-298919 2.43e-02 10_[+2(9.98e-05)]_70 chrXIII:302848-303196 4.84e-02 100 chrXIII:320976-321680 9.73e-01 100 chrXIII:352045-352518 2.15e-01 100 chrXIII:362939-363423 6.53e-01 100 chrXIII:372192-372749 8.23e-11 29_[+1(2.54e-11)]_21_[+2(3.12e-07)]_\ 1 chrXIII:378886-379622 5.54e-01 100 chrXIII:420313-420854 3.70e-07 59_[+1(2.54e-11)]_12 chrXIII:463432-463870 9.49e-01 100 chrXIII:480397-480903 7.10e-09 25_[+1(8.84e-10)]_20_[+2(5.16e-06)]_\ 6 chrXIII:504668-505324 2.22e-01 100 chrXIII:526551-526799 9.76e-01 100 chrXIII:526974-527174 3.34e-01 100 chrXIII:551355-552323 7.21e-01 100 chrXIII:552538-553348 7.63e-01 100 chrXIII:572558-573569 3.05e-01 100 chrXIII:586397-586896 2.54e-07 44_[+1(2.54e-11)]_27 chrXIII:587080-587252 3.08e-01 100 chrXIII:632494-634369 3.97e-01 100 chrXIII:650527-651208 8.19e-01 100 chrXIII:731476-734017 5.47e-01 100 chrXIII:747731-748240 1.23e-03 9_[+2(2.22e-07)]_71 chrXIII:753611-754903 9.99e-01 100 chrXIII:768197-768433 9.62e-01 100 chrXIII:808113-808529 1.06e-03 27_[+2(1.50e-06)]_53 chrXIII:831703-832027 5.87e-01 100 chrXIII:837701-838472 8.76e-01 100 chrXIII:861222-861402 4.59e-01 100 chrXIII:872713-872931 3.73e-01 100 chrXIV:61961-64554 4.90e-01 100 chrXIV:96021-96464 1.80e-08 53_[+1(3.37e-10)]_18 chrXIV:102582-102986 1.66e-05 21_[-1(9.69e-10)]_50 chrXIV:104602-105135 4.61e-06 25_[-1(3.37e-10)]_46 chrXIV:241379-241792 8.65e-03 28_[+3(2.34e-05)]_57 chrXIV:330424-331119 9.63e-01 100 chrXIV:374675-375081 2.41e-01 100 chrXIV:442863-445017 8.19e-01 100 chrXIV:494926-495809 2.77e-02 57_[-3(6.76e-05)]_2_[-3(7.73e-06)]_\ 11 chrXIV:499221-499495 9.23e-01 100 chrXIV:499662-500680 8.94e-02 100 chrXIV:546580-547702 6.17e-13 1_[-2(1.56e-07)]_50_[-1(4.38e-13)] chrXIV:560322-560785 4.78e-01 100 chrXIV:568055-568527 9.98e-01 100 chrXIV:569609-570048 8.89e-01 100 chrXIV:602081-602572 3.60e-03 42_[-2(7.19e-07)]_38 chrXIV:631507-632010 8.57e-01 100 chrXIV:632498-632961 5.72e-01 100 chrXIV:725465-726362 9.23e-02 56_[+3(3.57e-05)]_29 chrXIV:783727-784314 9.70e-04 63_[-3(3.78e-07)]_[-3(1.63e-06)]_7 chrXV:79691-80163 1.93e-03 45_[-3(5.98e-05)]_7_[-3(2.49e-06)]_\ 18 chrXV:92717-93761 6.30e-01 100 chrXV:94097-94802 5.86e-01 100 chrXV:109540-110646 4.87e-01 100 chrXV:110871-111202 4.13e-03 28_[+2(1.78e-06)]_52 chrXV:113189-113882 6.56e-02 4_[+3(2.02e-05)]_81 chrXV:161099-161710 7.52e-01 100 chrXV:167500-168532 8.53e-01 100 chrXV:216225-216692 1.59e-04 43_[+3(3.70e-06)]_9_[+3(3.70e-06)]_\ 18 chrXV:226539-226866 2.47e-05 10_[+2(2.06e-09)]_70 chrXV:227759-228758 7.20e-01 100 chrXV:253812-254091 5.43e-04 46_[+3(8.58e-05)]_12_[-3(1.83e-06)]_\ 12 chrXV:274329-274995 5.40e-05 67_[-2(1.05e-08)]_13 chrXV:281683-282815 9.46e-08 1_[-1(3.87e-12)]_70 chrXV:287770-288392 6.14e-01 100 chrXV:300886-301697 2.12e-01 100 chrXV:301897-302159 6.71e-01 100 chrXV:339831-340762 5.87e-06 57_[+1(3.73e-10)]_14 chrXV:353911-354310 6.13e-04 26_[+2(2.49e-07)]_54 chrXV:354644-354813 9.57e-01 100 chrXV:438441-439443 6.20e-01 100 chrXV:464281-464804 5.08e-09 25_[-1(4.38e-13)]_46 chrXV:487453-487715 8.16e-01 100 chrXV:504918-505519 5.24e-01 100 chrXV:505727-505910 8.01e-01 100 chrXV:571394-572612 1.07e-08 3_[-2(8.72e-07)]_19_[-1(2.32e-09)]_\ 29 chrXV:594319-594641 5.61e-01 100 chrXV:639215-639431 2.34e-06 40_[-3(5.11e-10)]_45 chrXV:663226-664796 3.30e-01 100 chrXV:678219-679148 9.78e-01 100 chrXV:710069-710582 9.82e-01 100 chrXV:779686-780827 8.06e-01 100 chrXV:854059-854827 1.43e-02 58_[+2(9.15e-06)]_22 chrXV:866546-867211 5.08e-01 100 chrXV:901445-902302 9.97e-01 100 chrXV:968118-968551 1.50e-01 100 chrXV:976380-976712 7.29e-01 100 chrXV:978808-979162 4.41e-01 100 chrXV:979691-981320 1.99e-02 [+3(4.95e-06)]_43_[+3(7.61e-05)]_27 chrXV:1003976-1004972 8.86e-01 100 chrXV:1025167-1026078 5.79e-02 100 chrXV:1028635-1029423 2.63e-01 100 chrXV:1070692-1071351 8.73e-04 35_[-3(1.39e-07)]_50 chrXVI:55829-56347 2.36e-01 100 chrXVI:76091-76781 2.57e-02 15_[+2(7.18e-05)]_65 chrXVI:135532-135825 9.44e-01 100 chrXVI:172844-174126 9.25e-01 100 chrXVI:188584-189212 3.19e-01 100 chrXVI:208553-211167 5.92e-01 100 chrXVI:280573-281386 4.97e-01 100 chrXVI:281562-281928 1.51e-03 55_[+3(5.62e-05)]_1_[+3(4.96e-07)]_\ 14 chrXVI:302548-305030 3.09e-01 100 chrXVI:338755-339333 8.96e-01 100 chrXVI:378658-379013 2.34e-03 26_[-3(1.04e-06)]_10_[-3(1.63e-06)]_\ 34 chrXVI:404584-405561 3.27e-01 100 chrXVI:406173-408166 6.93e-01 100 chrXVI:435557-436199 5.24e-05 69_[+1(2.13e-08)]_2 chrXVI:519792-520560 1.12e-01 27_[+2(7.40e-05)]_53 chrXVI:559874-560481 1.97e-01 100 chrXVI:560658-560942 1.28e-01 100 chrXVI:571311-572497 3.86e-01 100 chrXVI:581839-582295 5.35e-03 43_[-2(5.16e-06)]_37 chrXVI:621468-622863 9.24e-01 100 chrXVI:689062-689871 8.02e-01 100 chrXVI:699746-700664 1.34e-02 14_[+3(5.42e-06)]_47_[+3(4.07e-05)]_\ 9 chrXVI:718596-719391 3.91e-01 100 chrXVI:731682-732330 2.91e-01 100 chrXVI:744062-744630 5.54e-06 25_[-1(3.32e-08)]_46 chrXVI:768535-769481 9.86e-01 100 chrXVI:775658-776130 6.27e-01 100 chrXVI:794420-796109 9.38e-01 100 chrXVI:810582-810881 3.73e-10 1_[-2(4.82e-08)]_13_[-1(9.69e-10)]_\ 37 chrXVI:819277-819935 2.08e-06 12_[-1(1.63e-10)]_59 chrXVI:860132-860668 4.84e-14 27_[-2(2.06e-09)]_18_[-1(3.87e-12)]_\ 6 chrXVI:879600-880567 3.32e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************