******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--STE12/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:300075-300264 1.0000 100 chrVIII:147451-148727 1.0000 100 chrXIV:771845-772380 1.0000 100 chrVII:110285-110787 1.0000 100 chrXI:260219-260734 1.0000 100 chrI:141618-141962 1.0000 100 chrIV:1288258-1288871 1.0000 100 chrXVI:819139-820178 1.0000 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chrX:517652-517752 1.0000 100 chrVII:857092-857647 1.0000 100 chrV:396165-398119 1.0000 100 chrXV:968067-969177 1.0000 100 chrVII:609324-610110 1.0000 100 chrIV:410163-410814 1.0000 100 chrXVI:731665-732331 1.0000 100 chrXIII:168240-169524 1.0000 100 chrX:354000-354100 1.0000 100 chrI:181120-181569 1.0000 100 chrX:424268-424368 1.0000 100 chrVIII:119647-121679 1.0000 100 chrXII:731383-732397 1.0000 100 chrV:483016-484174 1.0000 100 chrVII:1004037-1004423 1.0000 100 chrX:120163-120263 1.0000 100 chrX:89865-89965 1.0000 100 chrXII:1029093-1030306 1.0000 100 chrVII:730969-731453 1.0000 100 chrXII:214696-215066 1.0000 100 chrXIV:569624-570076 1.0000 100 chrIX:99655-100048 1.0000 100 chrV:438231-438997 1.0000 100 chrXII:818507-819126 1.0000 100 chrXIII:572704-573134 1.0000 100 chrV:140162-141429 1.0000 100 chrVII:401332-401674 1.0000 100 chrXVI:502876-503247 1.0000 100 chrVII:205320-206206 1.0000 100 chrXI:517225-518256 1.0000 100 chrIII:107145-107835 1.0000 100 chrVII:323431-324123 1.0000 100 chrXV:135675-136324 1.0000 100 chrIX:394580-395349 1.0000 100 chrX:73397-73497 1.0000 100 chrXV:925151-925437 1.0000 100 chrXII:47298-49096 1.0000 100 chrXIII:420272-421004 1.0000 100 chrIV:722313-722712 1.0000 100 chrX:156137-156237 1.0000 100 chrXII:809267-814348 1.0000 100 chrVII:255200-255692 1.0000 100 chrXIII:131605-132087 1.0000 100 chrXVI:775616-776188 1.0000 100 chrVIII:358272-358746 1.0000 100 chrII:88923-89499 1.0000 100 chrXIV:88075-89764 1.0000 100 chrXV:383022-383468 1.0000 100 chrVI:224328-225332 1.0000 100 chrXIII:195939-196293 1.0000 100 chrXII:780520-781869 1.0000 100 chrX:702930-703030 1.0000 100 chrVII:147994-149552 1.0000 100 chrXIV:351174-353134 1.0000 100 chrVII:531408-532533 1.0000 100 chrIV:616461-616794 1.0000 100 chrXV:274459-275010 1.0000 100 chrIV:330971-333129 1.0000 100 chrVII:610509-611493 1.0000 100 chrXIII:747622-748161 1.0000 100 chrIV:579006-580799 1.0000 100 chrXV:28752-30864 1.0000 100 chrVII:315764-316035 1.0000 100 chrXIV:560153-560990 1.0000 100 chrXIV:104587-105460 1.0000 100 chrXII:819299-820437 1.0000 100 chrIX:426788-428005 1.0000 100 chrVII:845269-846045 1.0000 100 chrIX:68258-68485 1.0000 100 chrXV:722903-724924 1.0000 100 chrXI:245725-245966 1.0000 100 chrXVI:302657-304363 1.0000 100 chrIII:81970-82657 1.0000 100 chrXII:282730-283980 1.0000 100 chrXIII:752992-754253 1.0000 100 chrVIII:381426-382502 1.0000 100 chrVII:561154-561720 1.0000 100 chrVI:82072-84674 1.0000 100 chrIV:1359434-1361329 1.0000 100 chrIX:321380-324394 1.0000 100 chrXV:300900-302106 1.0000 100 chrIX:391144-392148 1.0000 100 chrXIII:797802-798258 1.0000 100 chrXI:666020-666175 1.0000 100 chrX:662455-662555 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--STE12/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--STE12/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--STE12/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.302 C 0.198 G 0.198 T 0.302 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--STE12/background): A 0.306 C 0.194 G 0.194 T 0.306 ******************************************************************************** ******************************************************************************** MOTIF AAAAAAAAYGMYCMSDMBSGGRDTCGAACC MEME-1 width = 30 sites = 71 llr = 1348 E-value = 1.7e-256 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAAAAAAYGMYCMSDMBSGGRDTCGAACC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 88989776113123244:13:64:::aa:: pos.-specific C 11::::::3154554:4431::1:8:::a6 probability G 11:1:1:1:72121242366a43::a:::1 matrix T 1111112352142223:3::::3a2::::3 bits 2.4 * * * 2.1 * * * 1.9 * * * 1.7 * * **** Relative 1.4 * ****** Entropy 1.2 * * * ****** (27.4 bits) 0.9 * * * * ** ****** 0.7 ******* * * **** ******* 0.5 ******* *** ****** ******* 0.2 ********************** ******* 0.0 ------------------------------ Multilevel AAAAAAAATGCTCCCGCCGGGAATCGAACC consensus TTC AC AGAAGCA GG T T sequence TGT T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAAYGMYCMSDMBSGGRDTCGAACC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrXIV:569624-570076 + 59 3.23e-12 CAATGCAAAA AAAAAGAATGGTCTCTAGCGGGATCGAACC GCTGATCCCC chrVII:828421-828970 + 70 4.39e-12 TTTTTATTGC AAAAAAAGCACTCACGATGGGGGTCGAACC C chrIX:336067-336618 + 49 5.92e-12 CAGTTATGGT AAAAAAATCTCCGCGACGGGGAATTGAACC CCGATCTGGC chrXII:1051924-1052219 + 42 5.92e-12 TTAAAGTAAA AAAAATAATGGTCTCTAGCGGGATCGAACC GCTGATCCCC chrX:204553-204653 - 29 5.92e-12 TCAAGGGCCA AAAAAAATCTCCGCGACGGGGAATTGAACC CCGATCTGGC chrII:405685-406400 - 18 5.92e-12 AGGAGTAGCC AAAAAAATCTCCGCGACGGGGAATTGAACC CCGATCTGGC chrVII:401332-401674 + 66 7.95e-12 AAAACTTTCA AAAAAATACTCCGATACGGGGAGTCGAACC CCGGT chrX:115675-115775 + 12 7.95e-12 CTAATCACAT AAAAAATACTCCGATACGGGGAGTCGAACC CCGGTCTCCA chrX:396568-396668 + 6 9.19e-12 TATAA AAAAGAAATGCGCAAGCCCGGAATCGAACC GGGGGCCCAA chrXIV:632434-632920 - 24 9.19e-12 CTGAAATAAG AAAAAAAACGACCCCAGTGAGGGTTGAACT CACGATCTTG chrIII:151049-151513 + 45 1.06e-11 TTTTCCAAGA AAAAAGAAAGCCCTGTAGGGGGCTCGAACC CCTAACCTTA chrXVI:209969-210487 + 6 2.13e-11 AGCAA AAAGAAAACTCCGATACGGGGAGTCGAACC CCGGTCTCCA chrXIII:572704-573134 + 6 2.80e-11 TTGAA AAAAAATGTGCTCCAGGGGAGGTTCGAACT CTCGACCTTC chrV:288139-288737 + 47 2.80e-11 CTCTAACAAT AAAAAAAACGACACCAGCAGGATTTGAACC AGCGCGGGCA chrIX:299983-300478 + 40 3.19e-11 TGAAAATGGT AAAAAGATAGCCCTGTAGGGGGCTCGAACC CCTAACCTTA chrV:130802-131429 + 9 3.19e-11 AGCGGGGG AAAAAAATAGGTCTTACCCGGATTCGAACC GGGGTTGTTC chrVII:185525-185908 + 40 3.19e-11 TTTGAGCCTA AAAAAGATAGCCCTGTAGGGGGCTCGAACC CCTAACCTTA chrV:176901-177490 - 4 4.73e-11 GTAGCCATCA AAAAAGTACTCCGATACGGGGAGTCGAACC CCG chrXI:307899-308434 + 20 5.38e-11 TCTGACGGAA AAAAAAATTGATTTCGCCCAGGATCGAACT GGGGACGTTC chrX:531572-531672 - 18 5.38e-11 GAAAAAAAGA AAAGAAACTGCGCAAGCCCGGAATCGAACC GGGGGCCCAA chrII:266195-266689 - 37 6.94e-11 TTTCAGTATT CAAAAAAATGCTTCCAATCGGATTTGAACC GATGATCTCC chrXV:353747-354307 + 56 7.87e-11 AAAGTGCACG ACAAAAAATGCTTCCAATCGGATTTGAACC GATGATCTCC chrXVI:435642-436182 + 23 7.87e-11 TTCTTTGGAA AAAAAGAAAGCTCGCACTCAGGATCGAACT AAGGACCAAC chrXIV:95969-96465 + 66 8.91e-11 CAATGTCATC AAAAAATTTGAGCGGTACGAGAATCGAACC CGTGT chrIV:802535-802990 + 11 8.91e-11 TAGAGTAAAA ATAAAAAGAGGTCCTACCCGGATTCGAACC GGGGTTGTCC chrXIII:131605-132087 + 21 1.14e-10 AAAAAAGAAG AAACAAAGCACTCACGATGGGGGTCGAACC CATAATCTTC chrXII:214696-215066 + 44 1.14e-10 ATAAAAGTAA AAAATAAATGGACGCAACCGGAATCGAACC GATGACCTCT chrX:355184-355284 - 2 1.14e-10 ATCACGGAAG AAACAAAGCACTCACGATGGGGGTCGAACC C chrX:374193-374293 + 46 1.14e-10 ATCACGGAAG AAACAAAGCACTCACGATGGGGGTCGAACC CATAATCTTC chrXIII:747622-748161 + 43 1.29e-10 AAAAACAATA CTAAAAAACACTCACGATGGGGGTCGAACC CATAATCTTC chrXI:513039-513594 + 58 1.84e-10 AAAAGCAAAA TAAAAAATCTCCGCGACGGGGAATTGAACC CCGATCTGGC chrXVI:860160-860711 - 43 2.07e-10 GGAGCAAAAA ATAAAATCTGCGCAAGCCCGGAATCGAACC GGGGGCCCAA chrXIII:586350-586910 + 48 2.07e-10 GGGATGTCTT CAAAAAAATGATTTCGCCCAGGATCGAACT GGGGACGTTC chrXII:975765-976204 + 41 2.32e-10 TAATGCAAAA AAAATAAACGACCCCAGTGAGGGTTGAACT CACGATCTTG chrII:642841-643247 + 5 2.32e-10 AAAA AAAAAAGAAGCTCGCACTCAGGATCGAACT AAGGACCAAC chrVIII:134108-134636 - 49 2.61e-10 GTTCATTTTA GCAAAAAAAGGTCCTACCCGGATTCGAACC GGGGTTGTCC chrXII:167700-168223 + 25 2.92e-10 AAGAAAAAGA AAAAATAACGACAACTGCAGGACTCGAACC TGCGCGGGCA chrII:226970-227362 - 19 2.92e-10 TTACTGTCCA AAAAATAACGACAACTGCAGGACTCGAACC TGCGCGGGCA chrXIII:290582-291134 - 43 3.27e-10 ATTTCTTCAA AAAGAAGACTCCGATACGGGGAGTCGAACC CCGGTCTCCA chrX:422695-422795 - 55 3.27e-10 TCACAAAAAA AGAAAATGTGCTCCAGGGGAGGTTCGAACT CTCGACCTTC chrXV:438477-439001 - 28 5.11e-10 ACTGACAAAA ATAAAGAACTCCTCATAGGGGGCTCGAACC CCTGACATTT chrX:378229-378329 - 54 5.11e-10 ATTAAAAAAA CAAAAAATTGATTTCGCCCAGGATCGAACT GGGGACGTTC chrVII:730969-731453 - 28 1.08e-09 CTCATTTCAA GCAAAAAACGACCCCAGTGAGGGTTGAACT CACGATCTTG chrVII:700202-701273 - 48 1.62e-09 GTAGATTCAA AAAAATATTGATACCCGCGGGGTTTGAACC CGCGCCTCCG chrXI:302701-303361 - 21 1.62e-09 TATGGCAAAA AAAGAAAATGAAACGGACAGGAATTGAACC TGCAACCCTT chrV:487084-487580 + 41 1.97e-09 GAAAAAATAT AACGAATACTCCGATACGGGGAGTCGAACC CCGGTCTCCA chrIV:644909-645366 + 58 2.91e-09 AGAAGCCACA GTTAAAAAAGGTCCTACCCGGATTCGAACC GGGGTTGTCC chrXIII:168240-169524 - 30 3.20e-09 AAAAAGGGAA AAAAAATATCTCCCGGGGGCGAGTCGAACG CCCGATCTCA chrXIII:837760-838308 - 11 3.20e-09 ATCAAAAGTA AAAAAATATCTCCCGGGGGCGAGTCGAACG CCCGATCTCA chrXVI:744072-744612 - 42 3.20e-09 ACTTTAGGGA AAAAATTTTGCCACCTGTCAGAATTGAACT AACGACCTTT chrVI:210314-210935 + 37 3.20e-09 AAATTTCAGA AAAAAATATCTCCCGGGGGCGAGTCGAACG CCCGATCTCA chrVII:823341-823718 - 55 3.51e-09 AATGTAATCT TCAAAAAATGATTTCGCCCAGGATCGAACT GGGGACGTTC chrXI:578760-579371 - 24 3.51e-09 ATCTAAAAAA GTAAAGAACTCCTCATAGGGGGCTCGAACC CCTGACATTT chrIV:1175747-1176086 - 14 4.64e-09 TACCGTGCTC GGCAAAAATGCTCCAGGGGAGGTTCGAACT CTCGACCTTC chrXV:464279-464820 - 31 6.10e-09 AAATAATTAA AAATAAAAGGGGCGAGCTGGGAATTGAACC CAGGGCCTCT chrVII:422878-423564 - 13 6.10e-09 TTAAATGGAA AAAAATAATGGTTGCTAAGAGATTCGAACT CTTGCATCTT chrX:415662-415762 + 26 6.67e-09 AAAAATAAAA AAATAAATTGAAACGGACAGGAATTGAACC TGCAACCCTT chrXIII:379063-379612 + 8 6.67e-09 GGCTAAA AAATAAATTGAAACGGACAGGAATTGAACC TGCAACCCTT chrIV:488408-489150 + 60 7.29e-09 TTACGATAAA AAAGATTCTGATCCAACCGAGGTTCGAACT CGGGATCTTC chrVIII:358272-358746 + 11 9.48e-09 TAAATCGTTA AAAAAATATGCGAATTCTGTGGATCGAACA CAGGACCTCC chrIV:946100-946632 - 63 1.33e-08 GCTTGACA TAAAAAAATCTCCCGGGGGCGAGTCGAACG CCCGATCTCA chrXV:663545-664086 + 39 1.45e-08 ATAAAATATT CTTAAAAATGATTTCGCCCAGGATCGAACT GGGGACGTTC chrXV:274459-275010 - 68 2.18e-08 AAA AAGAAATGCGTCACAGACAGGATTCGAACC TGCGCAGGTA chrXVI:622189-622855 + 60 3.23e-08 GCAGGTCGAA AAAATAAATGCGAATTCTGTGGATCGAACA CAGGACCTCC chrXVI:55864-56423 + 68 5.07e-08 ATGGGGAAAA AAATTAATTGAAACGGACAGGAATTGAACC TGC chrVII:857092-857647 + 51 8.37e-08 TATTGAAAAA AAAATTATTGGTTGCTAAGAGATTCGAACT CTTGCATCTT chrXI:458008-459368 - 11 9.61e-08 ATAAAAAAAT ATATAATATGGTTGCTAAGAGATTCGAACT CTTGCATCTT chrXIII:807986-808545 + 23 1.10e-07 ATACGAAAAA TGAAGGGAAGGTCCCACCCGGATTCGAACT GGGGTTGTTC chrVII:779386-779976 - 35 1.86e-07 AAATTAAAAA AGTAATCTTGAGCGGTACGAGAATCGAACC CGTGTCCCCA chrXVI:559965-560484 + 16 1.86e-07 AAAATACAAA AATAGAAATGCGAATTCTGTGGATCGAACA CAGGACCTCC chrXVI:338476-339279 + 13 4.33e-07 AAAAGAAAAA AATAAATTTAGCGCCGCTCGGTTTCGATCC GAGGACATCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAAYGMYCMSDMBSGGRDTCGAACC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:569624-570076 3.2e-12 58_[+1]_12 chrVII:828421-828970 4.4e-12 69_[+1]_1 chrIX:336067-336618 5.9e-12 48_[+1]_22 chrXII:1051924-1052219 5.9e-12 41_[+1]_29 chrX:204553-204653 5.9e-12 28_[-1]_42 chrII:405685-406400 5.9e-12 17_[-1]_53 chrVII:401332-401674 7.9e-12 65_[+1]_5 chrX:115675-115775 7.9e-12 11_[+1]_59 chrX:396568-396668 9.2e-12 5_[+1]_65 chrXIV:632434-632920 9.2e-12 23_[-1]_47 chrIII:151049-151513 1.1e-11 44_[+1]_26 chrXVI:209969-210487 2.1e-11 5_[+1]_65 chrXIII:572704-573134 2.8e-11 5_[+1]_65 chrV:288139-288737 2.8e-11 46_[+1]_24 chrIX:299983-300478 3.2e-11 39_[+1]_31 chrV:130802-131429 3.2e-11 8_[+1]_62 chrVII:185525-185908 3.2e-11 39_[+1]_31 chrV:176901-177490 4.7e-11 3_[-1]_67 chrXI:307899-308434 5.4e-11 19_[+1]_51 chrX:531572-531672 5.4e-11 17_[-1]_53 chrII:266195-266689 6.9e-11 36_[-1]_34 chrXV:353747-354307 7.9e-11 55_[+1]_15 chrXVI:435642-436182 7.9e-11 22_[+1]_48 chrXIV:95969-96465 8.9e-11 65_[+1]_5 chrIV:802535-802990 8.9e-11 10_[+1]_60 chrXIII:131605-132087 1.1e-10 20_[+1]_50 chrXII:214696-215066 1.1e-10 43_[+1]_27 chrX:355184-355284 1.1e-10 1_[-1]_69 chrX:374193-374293 1.1e-10 45_[+1]_25 chrXIII:747622-748161 1.3e-10 42_[+1]_28 chrXI:513039-513594 1.8e-10 57_[+1]_13 chrXVI:860160-860711 2.1e-10 42_[-1]_28 chrXIII:586350-586910 2.1e-10 47_[+1]_23 chrXII:975765-976204 2.3e-10 40_[+1]_30 chrII:642841-643247 2.3e-10 4_[+1]_66 chrVIII:134108-134636 2.6e-10 48_[-1]_22 chrXII:167700-168223 2.9e-10 24_[+1]_46 chrII:226970-227362 2.9e-10 18_[-1]_52 chrXIII:290582-291134 3.3e-10 42_[-1]_28 chrX:422695-422795 3.3e-10 54_[-1]_16 chrXV:438477-439001 5.1e-10 27_[-1]_43 chrX:378229-378329 5.1e-10 53_[-1]_17 chrVII:730969-731453 1.1e-09 27_[-1]_43 chrVII:700202-701273 1.6e-09 47_[-1]_23 chrXI:302701-303361 1.6e-09 20_[-1]_50 chrV:487084-487580 2e-09 40_[+1]_30 chrIV:644909-645366 2.9e-09 57_[+1]_13 chrXIII:168240-169524 3.2e-09 29_[-1]_41 chrXIII:837760-838308 3.2e-09 10_[-1]_60 chrXVI:744072-744612 3.2e-09 41_[-1]_29 chrVI:210314-210935 3.2e-09 36_[+1]_34 chrVII:823341-823718 3.5e-09 54_[-1]_16 chrXI:578760-579371 3.5e-09 23_[-1]_47 chrIV:1175747-1176086 4.6e-09 13_[-1]_57 chrXV:464279-464820 6.1e-09 30_[-1]_40 chrVII:422878-423564 6.1e-09 12_[-1]_58 chrX:415662-415762 6.7e-09 25_[+1]_45 chrXIII:379063-379612 6.7e-09 7_[+1]_63 chrIV:488408-489150 7.3e-09 59_[+1]_11 chrVIII:358272-358746 9.5e-09 10_[+1]_60 chrIV:946100-946632 1.3e-08 62_[-1]_8 chrXV:663545-664086 1.4e-08 38_[+1]_32 chrXV:274459-275010 2.2e-08 67_[-1]_3 chrXVI:622189-622855 3.2e-08 59_[+1]_11 chrXVI:55864-56423 5.1e-08 67_[+1]_3 chrVII:857092-857647 8.4e-08 50_[+1]_20 chrXI:458008-459368 9.6e-08 10_[-1]_60 chrXIII:807986-808545 1.1e-07 22_[+1]_48 chrVII:779386-779976 1.9e-07 34_[-1]_36 chrXVI:559965-560484 1.9e-07 15_[+1]_55 chrXVI:338476-339279 4.3e-07 12_[+1]_58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAAYGMYCMSDMBSGGRDTCGAACC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAAAAAAYGMYCMSDMBSGGRDTCGAACC width=30 seqs=71 chrXIV:569624-570076 ( 59) AAAAAGAATGGTCTCTAGCGGGATCGAACC 1 chrVII:828421-828970 ( 70) AAAAAAAGCACTCACGATGGGGGTCGAACC 1 chrIX:336067-336618 ( 49) AAAAAAATCTCCGCGACGGGGAATTGAACC 1 chrXII:1051924-1052219 ( 42) AAAAATAATGGTCTCTAGCGGGATCGAACC 1 chrX:204553-204653 ( 29) AAAAAAATCTCCGCGACGGGGAATTGAACC 1 chrII:405685-406400 ( 18) AAAAAAATCTCCGCGACGGGGAATTGAACC 1 chrVII:401332-401674 ( 66) AAAAAATACTCCGATACGGGGAGTCGAACC 1 chrX:115675-115775 ( 12) AAAAAATACTCCGATACGGGGAGTCGAACC 1 chrX:396568-396668 ( 6) AAAAGAAATGCGCAAGCCCGGAATCGAACC 1 chrXIV:632434-632920 ( 24) AAAAAAAACGACCCCAGTGAGGGTTGAACT 1 chrIII:151049-151513 ( 45) AAAAAGAAAGCCCTGTAGGGGGCTCGAACC 1 chrXVI:209969-210487 ( 6) AAAGAAAACTCCGATACGGGGAGTCGAACC 1 chrXIII:572704-573134 ( 6) AAAAAATGTGCTCCAGGGGAGGTTCGAACT 1 chrV:288139-288737 ( 47) AAAAAAAACGACACCAGCAGGATTTGAACC 1 chrIX:299983-300478 ( 40) AAAAAGATAGCCCTGTAGGGGGCTCGAACC 1 chrV:130802-131429 ( 9) AAAAAAATAGGTCTTACCCGGATTCGAACC 1 chrVII:185525-185908 ( 40) AAAAAGATAGCCCTGTAGGGGGCTCGAACC 1 chrV:176901-177490 ( 4) AAAAAGTACTCCGATACGGGGAGTCGAACC 1 chrXI:307899-308434 ( 20) AAAAAAATTGATTTCGCCCAGGATCGAACT 1 chrX:531572-531672 ( 18) AAAGAAACTGCGCAAGCCCGGAATCGAACC 1 chrII:266195-266689 ( 37) CAAAAAAATGCTTCCAATCGGATTTGAACC 1 chrXV:353747-354307 ( 56) ACAAAAAATGCTTCCAATCGGATTTGAACC 1 chrXVI:435642-436182 ( 23) AAAAAGAAAGCTCGCACTCAGGATCGAACT 1 chrXIV:95969-96465 ( 66) AAAAAATTTGAGCGGTACGAGAATCGAACC 1 chrIV:802535-802990 ( 11) ATAAAAAGAGGTCCTACCCGGATTCGAACC 1 chrXIII:131605-132087 ( 21) AAACAAAGCACTCACGATGGGGGTCGAACC 1 chrXII:214696-215066 ( 44) AAAATAAATGGACGCAACCGGAATCGAACC 1 chrX:355184-355284 ( 2) AAACAAAGCACTCACGATGGGGGTCGAACC 1 chrX:374193-374293 ( 46) AAACAAAGCACTCACGATGGGGGTCGAACC 1 chrXIII:747622-748161 ( 43) CTAAAAAACACTCACGATGGGGGTCGAACC 1 chrXI:513039-513594 ( 58) TAAAAAATCTCCGCGACGGGGAATTGAACC 1 chrXVI:860160-860711 ( 43) ATAAAATCTGCGCAAGCCCGGAATCGAACC 1 chrXIII:586350-586910 ( 48) CAAAAAAATGATTTCGCCCAGGATCGAACT 1 chrXII:975765-976204 ( 41) AAAATAAACGACCCCAGTGAGGGTTGAACT 1 chrII:642841-643247 ( 5) AAAAAAGAAGCTCGCACTCAGGATCGAACT 1 chrVIII:134108-134636 ( 49) GCAAAAAAAGGTCCTACCCGGATTCGAACC 1 chrXII:167700-168223 ( 25) AAAAATAACGACAACTGCAGGACTCGAACC 1 chrII:226970-227362 ( 19) AAAAATAACGACAACTGCAGGACTCGAACC 1 chrXIII:290582-291134 ( 43) AAAGAAGACTCCGATACGGGGAGTCGAACC 1 chrX:422695-422795 ( 55) AGAAAATGTGCTCCAGGGGAGGTTCGAACT 1 chrXV:438477-439001 ( 28) ATAAAGAACTCCTCATAGGGGGCTCGAACC 1 chrX:378229-378329 ( 54) CAAAAAATTGATTTCGCCCAGGATCGAACT 1 chrVII:730969-731453 ( 28) GCAAAAAACGACCCCAGTGAGGGTTGAACT 1 chrVII:700202-701273 ( 48) AAAAATATTGATACCCGCGGGGTTTGAACC 1 chrXI:302701-303361 ( 21) AAAGAAAATGAAACGGACAGGAATTGAACC 1 chrV:487084-487580 ( 41) AACGAATACTCCGATACGGGGAGTCGAACC 1 chrIV:644909-645366 ( 58) GTTAAAAAAGGTCCTACCCGGATTCGAACC 1 chrXIII:168240-169524 ( 30) AAAAAATATCTCCCGGGGGCGAGTCGAACG 1 chrXIII:837760-838308 ( 11) AAAAAATATCTCCCGGGGGCGAGTCGAACG 1 chrXVI:744072-744612 ( 42) AAAAATTTTGCCACCTGTCAGAATTGAACT 1 chrVI:210314-210935 ( 37) AAAAAATATCTCCCGGGGGCGAGTCGAACG 1 chrVII:823341-823718 ( 55) TCAAAAAATGATTTCGCCCAGGATCGAACT 1 chrXI:578760-579371 ( 24) GTAAAGAACTCCTCATAGGGGGCTCGAACC 1 chrIV:1175747-1176086 ( 14) GGCAAAAATGCTCCAGGGGAGGTTCGAACT 1 chrXV:464279-464820 ( 31) AAATAAAAGGGGCGAGCTGGGAATTGAACC 1 chrVII:422878-423564 ( 13) AAAAATAATGGTTGCTAAGAGATTCGAACT 1 chrX:415662-415762 ( 26) AAATAAATTGAAACGGACAGGAATTGAACC 1 chrXIII:379063-379612 ( 8) AAATAAATTGAAACGGACAGGAATTGAACC 1 chrIV:488408-489150 ( 60) AAAGATTCTGATCCAACCGAGGTTCGAACT 1 chrVIII:358272-358746 ( 11) AAAAAATATGCGAATTCTGTGGATCGAACA 1 chrIV:946100-946632 ( 63) TAAAAAAATCTCCCGGGGGCGAGTCGAACG 1 chrXV:663545-664086 ( 39) CTTAAAAATGATTTCGCCCAGGATCGAACT 1 chrXV:274459-275010 ( 68) AAGAAATGCGTCACAGACAGGATTCGAACC 1 chrXVI:622189-622855 ( 60) AAAATAAATGCGAATTCTGTGGATCGAACA 1 chrXVI:55864-56423 ( 68) AAATTAATTGAAACGGACAGGAATTGAACC 1 chrVII:857092-857647 ( 51) AAAATTATTGGTTGCTAAGAGATTCGAACT 1 chrXI:458008-459368 ( 11) ATATAATATGGTTGCTAAGAGATTCGAACT 1 chrXIII:807986-808545 ( 23) TGAAGGGAAGGTCCCACCCGGATTCGAACT 1 chrVII:779386-779976 ( 35) AGTAATCTTGAGCGGTACGAGAATCGAACC 1 chrXVI:559965-560484 ( 16) AATAGAAATGCGAATTCTGTGGATCGAACA 1 chrXVI:338476-339279 ( 13) AATAAATTTAGCGCCGCTCGGTTTCGATCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAAYGMYCMSDMBSGGRDTCGAACC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 9.34513 E= 1.7e-256 139 -146 -146 -244 134 -178 -178 -144 154 -278 -378 -212 139 -220 -120 -212 154 -1279 -220 -212 129 -1279 -61 -127 120 -378 -220 -35 95 -220 -78 -27 -112 80 -378 73 -186 -178 183 -86 -19 130 -8 -212 -212 102 -61 42 -74 134 -33 -86 -19 122 -61 -98 -98 112 30 -74 20 -378 97 -27 20 117 12 -1279 -285 92 80 -27 -144 67 157 -1279 -12 -178 167 -285 -1279 -1279 236 -1279 88 -1279 112 -444 37 -98 39 -27 -1279 -1279 -1279 171 -1279 197 -1279 -35 -1279 -1279 236 -1279 171 -1279 -1279 -1279 169 -1279 -1279 -444 -1279 236 -1279 -1279 -285 171 -178 -19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAAYGMYCMSDMBSGGRDTCGAACC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 71 E= 1.7e-256 0.802817 0.070423 0.070423 0.056338 0.774648 0.056338 0.056338 0.112676 0.887324 0.028169 0.014085 0.070423 0.802817 0.042254 0.084507 0.070423 0.887324 0.000000 0.042254 0.070423 0.746479 0.000000 0.126761 0.126761 0.704225 0.014085 0.042254 0.239437 0.591549 0.042254 0.112676 0.253521 0.140845 0.338028 0.014085 0.507042 0.084507 0.056338 0.690141 0.169014 0.267606 0.478873 0.183099 0.070423 0.070423 0.394366 0.126761 0.408451 0.183099 0.492958 0.154930 0.169014 0.267606 0.450704 0.126761 0.154930 0.154930 0.422535 0.239437 0.183099 0.352113 0.014085 0.380282 0.253521 0.352113 0.436620 0.211268 0.000000 0.042254 0.366197 0.338028 0.253521 0.112676 0.309859 0.577465 0.000000 0.281690 0.056338 0.619718 0.042254 0.000000 0.000000 1.000000 0.000000 0.563380 0.000000 0.422535 0.014085 0.394366 0.098592 0.253521 0.253521 0.000000 0.000000 0.000000 1.000000 0.000000 0.760563 0.000000 0.239437 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.985915 0.000000 0.000000 0.014085 0.000000 1.000000 0.000000 0.000000 0.042254 0.633803 0.056338 0.267606 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAAAAAYGMYCMSDMBSGGRDTCGAACC MEME-1 regular expression -------------------------------------------------------------------------------- AAAAAA[AT][AT][TC]G[CA][TC]C[CA][CG][GAT][CAG][CGT][GC][GA]G[AG][AGT]T[CT]GAAC[CT] -------------------------------------------------------------------------------- Time 352.23 secs. ******************************************************************************** ******************************************************************************** MOTIF CGNNSSCTTWWMCCACTRRRCYAHVVVVSC MEME-2 width = 30 sites = 50 llr = 815 E-value = 3.4e-102 ******************************************************************************** -------------------------------------------------------------------------------- Motif CGNNSSCTTWWMCCACTRRRCYAHVVVVSC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 113311112456:2a::434::a3234311 pos.-specific C 6232445221:4a6:9:22:a6:4322258 probability G 163254111:2::1:::356::::334441 matrix T 2123::265531:::1a1:::4:222:1:1 bits 2.4 * * 2.1 * * 1.9 * * 1.7 * ** * * Relative 1.4 * *** * * Entropy 1.2 * *** **** * (23.5 bits) 0.9 * * *** **** * 0.7 * ** ****** ***** ** 0.5 ** **** * ****** ****** * ** 0.2 *** ************************** 0.0 ------------------------------ Multilevel CGCTGCCTTTAACCACTAGGCCACGGAGCC consensus T GACGTCCATC A GAA T ACAGAG sequence AC G C TACCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGNNSSCTTWWMCCACTRRRCYAHVVVVSC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrIX:183291-183685 + 46 4.62e-13 GTTATTAGCA CGGTGCCTTAACCAACTGGGCCAAGAGACC AGGAATTTGT chrXII:734609-734969 - 63 4.62e-13 TATTAGCA CGGTGCCTTAACCAACTGGGCCAAGAGACC AAACTTTGTT chrXVI:879860-880886 + 17 4.62e-13 GTTATTAGCA CGGTGCCTTAACCAACTGGGCCAAGAGACC ATTATATTGT chrX:424268-424368 + 48 8.24e-11 ATCTTAAGTC TGCCGCCTTAGACCACTCGGCCAACCCTCC ATCTTATTTA chrIV:519656-519905 - 13 8.24e-11 ATCTTAAGTC TGCCGCCTTAGACCACTCGGCCAACCCTCC GTAAAATCAC chrXIV:725726-726639 + 56 8.24e-11 ATCTTAAGTC TGCCGCCTTAGACCACTCGGCCAACCCTCC AAAGATTTAT chrXII:962829-963266 + 29 8.24e-11 ATCTTAAGTC TGCCGCCTTAGACCACTCGGCCAACCCTCC GTCGATAATA chrIV:1150701-1151153 + 35 5.58e-10 GAAATAGCAG GCATCGCCTTAACCACTCGGCCACTGGGAC TGAAACACTT chrX:617699-617799 - 47 7.31e-10 CACCTAAATC TGACGCCTTAAACCACTCGGCCAAACTCCC ATTGTTTGTT chrVII:845269-846045 - 42 1.40e-09 ACGATGGCAA CGTTGGATTTTACCACTAAACCACTTGCGC TTGTTATTTA chrXV:226438-226883 + 42 1.40e-09 ACGATGGCAA CGTTGGATTTTACCACTAAACCACTTGCGC TGAATTTCTT chrVI:162031-162383 - 71 1.40e-09 . CGTTGGATTTTACCACTAAACCACTTGCGC TTGTTTTCTT chrX:396568-396668 + 55 1.40e-09 ACGATGGCAA CGTTGGATTTTACCACTAAACCACTTGCGC TTACTTTTGA chrII:197143-198280 + 9 1.40e-09 GATGGCAA CGTTGGATTTTACCACTAAACCACTTGCGC TTATTTCTTG chrIV:1305407-1305825 - 64 2.60e-09 TTCTAAT CTTTCGCCTTAACCACTCGGCCAAGTTGCC TTAATTTGTA chrVII:115328-115731 - 9 2.93e-09 GCTTAAAAGC CGAACGCTCTACCAACTGAGCTAACAAGGA TGAGTTCT chrVII:1004037-1004423 - 36 7.31e-09 GCATTACAAG TGCAACGCTCTACCACTAAGCTAAGGAGGC AAACCCTTGA chrVII:661529-661943 - 63 7.31e-09 ATTACAAG TGCAACGCTCTACCACTAAGCTAAGGAGGC AAATTTTTAC chrXII:92349-92732 - 58 8.16e-09 GTCGCCCAAA GCGAGAATCATACCACTAGACCACACGCCC TTATTAACTT chrXII:628193-628630 - 22 9.09e-09 TTCTTGAATC AGGCGCCTTAGACCGCTCGGCCAAACAACC ACTTATTTGT chrX:59003-59103 + 12 1.25e-08 CATTACTAGT GTGGCGCCTTACCAACTTGGCCATAGAAGC TTCTATTTTA chrXIII:420272-421004 + 44 1.39e-08 CGTGTTAAGC AGATGCCATAACCGACTAGACCACGAAACC TGTTATTTGT chrVII:823341-823718 - 3 1.39e-08 CGTGTTAAGC AGATGCCATAACCGACTAGACCACGAAACC AC chrX:378229-378329 - 2 1.39e-08 CGTGTTAAGC AGATGCCATAACCGACTAGACCACGAAACC T chrV:249769-250815 - 44 1.54e-08 GGATCAAAAC CGAAAGTGATAACCACTACACTATAGGACC AGTACAACTG chrXI:74415-74880 - 27 1.54e-08 ATTAACAGTC GCACGCCTTAACCAACTTGGCCATGGAGTC TAATTGCTAT chrIII:127512-127883 - 69 1.54e-08 TC GCACGCCTTAACCAACTTGGCCATGGAGTC ATTTTATCTT chrIV:802535-802990 + 61 1.54e-08 GGATCAAAAC CGAAAGTGATAACCACTACACTATAGGACC GACAATTCAT chrIV:520726-521180 - 69 1.54e-08 AC CGAAAGTGATAACCACTACACTATAGGACC CTAAAATGGA chrXIII:572704-573134 + 57 2.09e-08 GATTATGAGA CTGACGCTCTTCCTACTGAGCTACTGAAGC TATCTGTTAT chrX:422695-422795 - 4 2.09e-08 GATTATGAGA CTGACGCTCTTCCTACTGAGCTACTGAAGC ATA chrXIV:374605-375122 - 56 3.09e-08 TTTCTTCAGT CTGGCGCTCTCCCAACTGAGCTAAGTCCGC TTATTTTTCT chrII:350600-351043 - 56 4.10e-08 GGATCAAAAC CGAAAGTGATAACCACTACACTATAAAACC CTTTTATTGA chrV:130802-131429 + 59 4.10e-08 GGATCAAAAC CGAAAGTGATAACCACTACACTATAAAACC TCTTAATTAT chrX:517652-517752 + 40 5.92e-08 GGGTTATGAG CCCTGCGCGCTTCCACTGCGCCACGGCGCT TAACTTTTAT chrIII:149711-150213 - 8 5.92e-08 GGGTTATGAG CCCTGCGCGCTTCCACTGCGCCACGGCGCT CAACATT chrII:36232-36602 - 31 5.92e-08 TTTCTTCAGT CTGGCGCTCTCCCAACTGAGCTAAATCCGC TTACAACTGA chrXVI:338476-339279 + 63 5.92e-08 GGGTTATGAG CCCTGCGCGCTTCCACTGCGCCACGGCGCT GCTAAATC chrX:233722-233822 - 41 6.47e-08 GGTTCGTAGC CAGACGCCGTGACCATTGGGCCACGAGGAA CAAGAATATA chrXV:340112-340597 + 38 6.47e-08 GGTTCGTAGC CAGACGCCGTGACCATTGGGCCACGAGGAA CAGATCTTGA chrXV:110845-111204 + 30 1.29e-07 CCTTGGAAGG GTGGGATGATAACCACTACACTAACCGCCC GGGTTAATTG chrX:354000-354100 - 49 1.40e-07 ATTACAGTCT TGCGCCTTAAACCAACTTGGCTACCGAGAG TGATAAATGA chrIV:1201512-1202028 - 30 1.40e-07 GATTAAGAGT CATACGCGCTACCGATTGCGCCAACAAGGC TATTTATTTG chrVI:167243-167673 - 29 1.40e-07 ATTACAGTCT TGCGCCTTAAACCAACTTGGCTACCGAGAG TCATTTTTGT chrX:542790-542890 + 41 1.40e-07 ATTACAGTCT TGCGCCTTAAACCAACTTGGCTACCGAGAG TATTTAATTG chrX:355184-355284 - 34 2.43e-07 ACGCGACAAG CGCCCATTCTGACCATTAAACTATCACGGA AGAAACAAAG chrX:374193-374293 + 14 2.43e-07 ACGCGACAAG CGCCCATTCTGACCATTAAACTATCACGGA AGAAACAAAG chrXV:571754-572134 - 64 2.43e-07 CGACAAG CGCCCATTCTGACCATTAAACTATCACGGA TTTTAATTGT chrXIV:631695-632127 + 27 2.62e-07 CGCACCCTAA GCGAGAATCATACCTCTAGACCACACGCCC GGTAGAAGTT chrII:642841-643247 + 55 1.12e-06 AGATTTGCAA TCTGCTGCGCTACCACTGCGCCATACGAGC TTTCTATTAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGNNSSCTTWWMCCACTRRRCYAHVVVVSC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIX:183291-183685 4.6e-13 45_[+2]_25 chrXII:734609-734969 4.6e-13 62_[-2]_8 chrXVI:879860-880886 4.6e-13 16_[+2]_54 chrX:424268-424368 8.2e-11 47_[+2]_23 chrIV:519656-519905 8.2e-11 12_[-2]_58 chrXIV:725726-726639 8.2e-11 55_[+2]_15 chrXII:962829-963266 8.2e-11 28_[+2]_42 chrIV:1150701-1151153 5.6e-10 34_[+2]_36 chrX:617699-617799 7.3e-10 46_[-2]_24 chrVII:845269-846045 1.4e-09 41_[-2]_29 chrXV:226438-226883 1.4e-09 41_[+2]_29 chrVI:162031-162383 1.4e-09 70_[-2] chrX:396568-396668 1.4e-09 54_[+2]_16 chrII:197143-198280 1.4e-09 8_[+2]_62 chrIV:1305407-1305825 2.6e-09 63_[-2]_7 chrVII:115328-115731 2.9e-09 8_[-2]_62 chrVII:1004037-1004423 7.3e-09 35_[-2]_35 chrVII:661529-661943 7.3e-09 62_[-2]_8 chrXII:92349-92732 8.2e-09 57_[-2]_13 chrXII:628193-628630 9.1e-09 21_[-2]_49 chrX:59003-59103 1.3e-08 11_[+2]_59 chrXIII:420272-421004 1.4e-08 43_[+2]_27 chrVII:823341-823718 1.4e-08 2_[-2]_68 chrX:378229-378329 1.4e-08 1_[-2]_69 chrV:249769-250815 1.5e-08 43_[-2]_27 chrXI:74415-74880 1.5e-08 26_[-2]_44 chrIII:127512-127883 1.5e-08 68_[-2]_2 chrIV:802535-802990 1.5e-08 60_[+2]_10 chrIV:520726-521180 1.5e-08 68_[-2]_2 chrXIII:572704-573134 2.1e-08 56_[+2]_14 chrX:422695-422795 2.1e-08 3_[-2]_67 chrXIV:374605-375122 3.1e-08 55_[-2]_15 chrII:350600-351043 4.1e-08 55_[-2]_15 chrV:130802-131429 4.1e-08 58_[+2]_12 chrX:517652-517752 5.9e-08 39_[+2]_31 chrIII:149711-150213 5.9e-08 7_[-2]_63 chrII:36232-36602 5.9e-08 30_[-2]_40 chrXVI:338476-339279 5.9e-08 62_[+2]_8 chrX:233722-233822 6.5e-08 40_[-2]_30 chrXV:340112-340597 6.5e-08 37_[+2]_33 chrXV:110845-111204 1.3e-07 29_[+2]_41 chrX:354000-354100 1.4e-07 48_[-2]_22 chrIV:1201512-1202028 1.4e-07 29_[-2]_41 chrVI:167243-167673 1.4e-07 28_[-2]_42 chrX:542790-542890 1.4e-07 40_[+2]_30 chrX:355184-355284 2.4e-07 33_[-2]_37 chrX:374193-374293 2.4e-07 13_[+2]_57 chrXV:571754-572134 2.4e-07 63_[-2]_7 chrXIV:631695-632127 2.6e-07 26_[+2]_44 chrII:642841-643247 1.1e-06 54_[+2]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGNNSSCTTWWMCCACTRRRCYAHVVVVSC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CGNNSSCTTWWMCCACTRRRCYAHVVVVSC width=30 seqs=50 chrIX:183291-183685 ( 46) CGGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrXII:734609-734969 ( 63) CGGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrXVI:879860-880886 ( 17) CGGTGCCTTAACCAACTGGGCCAAGAGACC 1 chrX:424268-424368 ( 48) TGCCGCCTTAGACCACTCGGCCAACCCTCC 1 chrIV:519656-519905 ( 13) TGCCGCCTTAGACCACTCGGCCAACCCTCC 1 chrXIV:725726-726639 ( 56) TGCCGCCTTAGACCACTCGGCCAACCCTCC 1 chrXII:962829-963266 ( 29) TGCCGCCTTAGACCACTCGGCCAACCCTCC 1 chrIV:1150701-1151153 ( 35) GCATCGCCTTAACCACTCGGCCACTGGGAC 1 chrX:617699-617799 ( 47) TGACGCCTTAAACCACTCGGCCAAACTCCC 1 chrVII:845269-846045 ( 42) CGTTGGATTTTACCACTAAACCACTTGCGC 1 chrXV:226438-226883 ( 42) CGTTGGATTTTACCACTAAACCACTTGCGC 1 chrVI:162031-162383 ( 71) CGTTGGATTTTACCACTAAACCACTTGCGC 1 chrX:396568-396668 ( 55) CGTTGGATTTTACCACTAAACCACTTGCGC 1 chrII:197143-198280 ( 9) CGTTGGATTTTACCACTAAACCACTTGCGC 1 chrIV:1305407-1305825 ( 64) CTTTCGCCTTAACCACTCGGCCAAGTTGCC 1 chrVII:115328-115731 ( 9) CGAACGCTCTACCAACTGAGCTAACAAGGA 1 chrVII:1004037-1004423 ( 36) TGCAACGCTCTACCACTAAGCTAAGGAGGC 1 chrVII:661529-661943 ( 63) TGCAACGCTCTACCACTAAGCTAAGGAGGC 1 chrXII:92349-92732 ( 58) GCGAGAATCATACCACTAGACCACACGCCC 1 chrXII:628193-628630 ( 22) AGGCGCCTTAGACCGCTCGGCCAAACAACC 1 chrX:59003-59103 ( 12) GTGGCGCCTTACCAACTTGGCCATAGAAGC 1 chrXIII:420272-421004 ( 44) AGATGCCATAACCGACTAGACCACGAAACC 1 chrVII:823341-823718 ( 3) AGATGCCATAACCGACTAGACCACGAAACC 1 chrX:378229-378329 ( 2) AGATGCCATAACCGACTAGACCACGAAACC 1 chrV:249769-250815 ( 44) CGAAAGTGATAACCACTACACTATAGGACC 1 chrXI:74415-74880 ( 27) GCACGCCTTAACCAACTTGGCCATGGAGTC 1 chrIII:127512-127883 ( 69) GCACGCCTTAACCAACTTGGCCATGGAGTC 1 chrIV:802535-802990 ( 61) CGAAAGTGATAACCACTACACTATAGGACC 1 chrIV:520726-521180 ( 69) CGAAAGTGATAACCACTACACTATAGGACC 1 chrXIII:572704-573134 ( 57) CTGACGCTCTTCCTACTGAGCTACTGAAGC 1 chrX:422695-422795 ( 4) CTGACGCTCTTCCTACTGAGCTACTGAAGC 1 chrXIV:374605-375122 ( 56) CTGGCGCTCTCCCAACTGAGCTAAGTCCGC 1 chrII:350600-351043 ( 56) CGAAAGTGATAACCACTACACTATAAAACC 1 chrV:130802-131429 ( 59) CGAAAGTGATAACCACTACACTATAAAACC 1 chrX:517652-517752 ( 40) CCCTGCGCGCTTCCACTGCGCCACGGCGCT 1 chrIII:149711-150213 ( 8) CCCTGCGCGCTTCCACTGCGCCACGGCGCT 1 chrII:36232-36602 ( 31) CTGGCGCTCTCCCAACTGAGCTAAATCCGC 1 chrXVI:338476-339279 ( 63) CCCTGCGCGCTTCCACTGCGCCACGGCGCT 1 chrX:233722-233822 ( 41) CAGACGCCGTGACCATTGGGCCACGAGGAA 1 chrXV:340112-340597 ( 38) CAGACGCCGTGACCATTGGGCCACGAGGAA 1 chrXV:110845-111204 ( 30) GTGGGATGATAACCACTACACTAACCGCCC 1 chrX:354000-354100 ( 49) TGCGCCTTAAACCAACTTGGCTACCGAGAG 1 chrIV:1201512-1202028 ( 30) CATACGCGCTACCGATTGCGCCAACAAGGC 1 chrVI:167243-167673 ( 29) TGCGCCTTAAACCAACTTGGCTACCGAGAG 1 chrX:542790-542890 ( 41) TGCGCCTTAAACCAACTTGGCTACCGAGAG 1 chrX:355184-355284 ( 34) CGCCCATTCTGACCATTAAACTATCACGGA 1 chrX:374193-374293 ( 14) CGCCCATTCTGACCATTAAACTATCACGGA 1 chrXV:571754-572134 ( 64) CGCCCATTCTGACCATTAAACTATCACGGA 1 chrXIV:631695-632127 ( 27) GCGAGAATCATACCTCTAGACCACACGCCC 1 chrII:642841-643247 ( 55) TCTGCTGCGCTACCACTGCGCCATACGAGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGNNSSCTTWWMCCACTRRRCYAHVVVVSC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 9.44103 E= 3.4e-102 -193 153 -47 -48 -235 -11 168 -113 -23 63 53 -93 -3 18 -28 6 -113 89 136 -1229 -135 118 111 -393 -113 136 -69 -35 -235 18 -47 92 -76 18 -69 65 31 -69 -1229 71 59 -228 4 -3 92 89 -1229 -235 -1229 236 -1229 -1229 -35 172 -128 -293 165 -1229 -328 -393 -1229 218 -1229 -135 -1229 -1229 -1229 171 46 -28 63 -135 -3 18 131 -1229 31 -1229 168 -1229 -1229 236 -1229 -1229 -1229 168 -1229 31 171 -1229 -1229 -1229 15 111 -1229 -35 -35 42 81 -93 -3 4 81 -93 23 31 89 -293 6 18 97 -193 -135 131 89 -293 -135 197 -169 -235 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGNNSSCTTWWMCCACTRRRCYAHVVVVSC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 50 E= 3.4e-102 0.080000 0.560000 0.140000 0.220000 0.060000 0.180000 0.620000 0.140000 0.260000 0.300000 0.280000 0.160000 0.300000 0.220000 0.160000 0.320000 0.140000 0.360000 0.500000 0.000000 0.120000 0.440000 0.420000 0.020000 0.140000 0.500000 0.120000 0.240000 0.060000 0.220000 0.140000 0.580000 0.180000 0.220000 0.120000 0.480000 0.380000 0.120000 0.000000 0.500000 0.460000 0.040000 0.200000 0.300000 0.580000 0.360000 0.000000 0.060000 0.000000 1.000000 0.000000 0.000000 0.240000 0.640000 0.080000 0.040000 0.960000 0.000000 0.020000 0.020000 0.000000 0.880000 0.000000 0.120000 0.000000 0.000000 0.000000 1.000000 0.420000 0.160000 0.300000 0.120000 0.300000 0.220000 0.480000 0.000000 0.380000 0.000000 0.620000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.620000 0.000000 0.380000 1.000000 0.000000 0.000000 0.000000 0.340000 0.420000 0.000000 0.240000 0.240000 0.260000 0.340000 0.160000 0.300000 0.200000 0.340000 0.160000 0.360000 0.240000 0.360000 0.040000 0.320000 0.220000 0.380000 0.080000 0.120000 0.480000 0.360000 0.040000 0.120000 0.760000 0.060000 0.060000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGNNSSCTTWWMCCACTRRRCYAHVVVVSC MEME-2 regular expression -------------------------------------------------------------------------------- [CT]G[CGA][TAC][GC][CG][CT][TC][TC][TA][ATG][AC]C[CA]ACT[AG][GAC][GA]C[CT]A[CAT][GCA][GAC][AGC][GAC][CG]C -------------------------------------------------------------------------------- Time 675.99 secs. ******************************************************************************** ******************************************************************************** MOTIF CYHMACMCVCASAMCRYMCCC MEME-3 width = 21 sites = 15 llr = 311 E-value = 3.8e-032 ******************************************************************************** -------------------------------------------------------------------------------- Motif CYHMACMCVCASAMCRYMCCC MEME-3 Description -------------------------------------------------------------------------------- Simplified A :1359:7:3:9:a5:5:4::1 pos.-specific C a435:a3a39:4:5a:56a88 probability G ::::1:::4116:::5:::11 matrix T :55::::::::::::15::11 bits 2.4 * * * * * 2.1 * * * * * * 1.9 * * * * * * 1.7 * * * * * * * Relative 1.4 * ** * **** * ** Entropy 1.2 * ** * **** * **** (30.0 bits) 0.9 * ***** ****** ***** 0.7 ** ***** ************ 0.5 ** ****************** 0.2 ********************* 0.0 --------------------- Multilevel CTTAACACGCAGACCATCCCC consensus CAC C A C A GCA sequence C C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYHMACMCVCASAMCRYMCCC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIII:420272-421004 - 22 8.21e-12 ATGGCATCTG CTTAACACGCAGAACGTCCCC AGTTCGATCC chrVII:823341-823718 + 34 8.21e-12 ATGGCATCTG CTTAACACGCAGAACGTCCCC AGTTCGATCC chrXI:307899-308434 - 50 8.21e-12 ATGGCATCTG CTTAACACGCAGAACGTCCCC AGTTCGATCC chrXIII:586350-586910 - 78 8.21e-12 TG CTTAACACGCAGAACGTCCCC AGTTCGATCC chrX:378229-378329 + 33 8.21e-12 ATGGCATCTG CTTAACACGCAGAACGTCCCC AGTTCGATCC chrXV:663545-664086 - 69 8.21e-12 ATGGCATCTG CTTAACACGCAGAACGTCCCC AGTTCGATCC chrXI:666623-666799 - 8 5.40e-11 CACACCACAC CCACACACCCACACCACACCC ACACCAC chrVIII:562349-562593 - 39 7.51e-11 ACACACACAC CCACACCCACACACCACACCC ACACTTTTCA chrXI:3-176 + 7 7.51e-11 CACACA CCACACCCACACACCACACCC ACTACTCTAA chrXIII:5483-5659 + 20 7.51e-11 ATATATACAC CCACACCCACACACCACACCC ACACCCACAC chrIII:76-600 + 35 3.14e-10 CACCCACACA CACCACACCCACACCACACCC ACACCCACAC chrXV:216291-216715 + 20 1.49e-09 CCGCGCCTTC CTCAACCCAGGCACCGCCCCC AGGTAACCGT chrX:391828-391928 + 65 3.43e-09 GTCGCACACG CCCCACACCCAGACCTCCCTG CGAGCGGGCA chrIV:357218-357830 - 46 3.93e-09 ATCGAGCCAA CCCAACCCACAGAACATCCTA AAGCTTCAAA chrIX:254235-254548 - 63 8.77e-09 CGTGGTGGTA CTTCGCACCCAGACCATACGT CTTCCACTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYHMACMCVCASAMCRYMCCC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIII:420272-421004 8.2e-12 21_[-3]_58 chrVII:823341-823718 8.2e-12 33_[+3]_46 chrXI:307899-308434 8.2e-12 49_[-3]_30 chrXIII:586350-586910 8.2e-12 77_[-3]_2 chrX:378229-378329 8.2e-12 32_[+3]_47 chrXV:663545-664086 8.2e-12 68_[-3]_11 chrXI:666623-666799 5.4e-11 7_[-3]_72 chrVIII:562349-562593 7.5e-11 38_[-3]_41 chrXI:3-176 7.5e-11 6_[+3]_73 chrXIII:5483-5659 7.5e-11 19_[+3]_60 chrIII:76-600 3.1e-10 34_[+3]_45 chrXV:216291-216715 1.5e-09 19_[+3]_60 chrX:391828-391928 3.4e-09 64_[+3]_15 chrIV:357218-357830 3.9e-09 45_[-3]_34 chrIX:254235-254548 8.8e-09 62_[-3]_17 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYHMACMCVCASAMCRYMCCC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CYHMACMCVCASAMCRYMCCC width=21 seqs=15 chrXIII:420272-421004 ( 22) CTTAACACGCAGAACGTCCCC 1 chrVII:823341-823718 ( 34) CTTAACACGCAGAACGTCCCC 1 chrXI:307899-308434 ( 50) CTTAACACGCAGAACGTCCCC 1 chrXIII:586350-586910 ( 78) CTTAACACGCAGAACGTCCCC 1 chrX:378229-378329 ( 33) CTTAACACGCAGAACGTCCCC 1 chrXV:663545-664086 ( 69) CTTAACACGCAGAACGTCCCC 1 chrXI:666623-666799 ( 8) CCACACACCCACACCACACCC 1 chrVIII:562349-562593 ( 39) CCACACCCACACACCACACCC 1 chrXI:3-176 ( 7) CCACACCCACACACCACACCC 1 chrXIII:5483-5659 ( 20) CCACACCCACACACCACACCC 1 chrIII:76-600 ( 35) CACCACACCCACACCACACCC 1 chrXV:216291-216715 ( 20) CTCAACCCAGGCACCGCCCCC 1 chrX:391828-391928 ( 65) CCCCACACCCAGACCTCCCTG 1 chrIV:357218-357830 ( 46) CCCAACCCACAGAACATCCTA 1 chrIX:254235-254548 ( 63) CTTCGCACCCAGACCATACGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYHMACMCVCASAMCRYMCCC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 12.3178 E= 3.8e-032 -1055 236 -1055 -1055 -219 104 -1055 80 -20 46 -1055 61 80 127 -1055 -1055 161 -1055 -154 -1055 -1055 236 -1055 -1055 112 78 -1055 -1055 -1055 236 -1055 -1055 12 46 104 -1055 -1055 226 -154 -1055 161 -1055 -154 -1055 -1055 104 163 -1055 171 -1055 -1055 -1055 61 146 -1055 -1055 -1055 236 -1055 -1055 61 -1055 127 -219 -1055 127 -1055 80 39 163 -1055 -1055 -1055 236 -1055 -1055 -1055 204 -154 -120 -219 204 -154 -219 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYHMACMCVCASAMCRYMCCC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 15 E= 3.8e-032 0.000000 1.000000 0.000000 0.000000 0.066667 0.400000 0.000000 0.533333 0.266667 0.266667 0.000000 0.466667 0.533333 0.466667 0.000000 0.000000 0.933333 0.000000 0.066667 0.000000 0.000000 1.000000 0.000000 0.000000 0.666667 0.333333 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.333333 0.266667 0.400000 0.000000 0.000000 0.933333 0.066667 0.000000 0.933333 0.000000 0.066667 0.000000 0.000000 0.400000 0.600000 0.000000 1.000000 0.000000 0.000000 0.000000 0.466667 0.533333 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.466667 0.000000 0.466667 0.066667 0.000000 0.466667 0.000000 0.533333 0.400000 0.600000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.800000 0.066667 0.133333 0.066667 0.800000 0.066667 0.066667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYHMACMCVCASAMCRYMCCC MEME-3 regular expression -------------------------------------------------------------------------------- C[TC][TAC][AC]AC[AC]C[GAC]CA[GC]A[CA]C[AG][TC][CA]CCC -------------------------------------------------------------------------------- Time 986.35 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:300075-300264 9.40e-01 100 chrVIII:147451-148727 5.99e-01 100 chrXIV:771845-772380 2.68e-01 100 chrVII:110285-110787 7.25e-01 100 chrXI:260219-260734 2.44e-01 100 chrI:141618-141962 1.59e-01 100 chrIV:1288258-1288871 5.83e-01 100 chrXVI:819139-820178 5.87e-01 100 chrXIII:660767-662240 1.32e-01 100 chrVII:436561-439941 9.44e-01 100 chrVII:328374-329174 7.69e-01 100 chrXI:364464-365504 5.06e-01 100 chrIV:520726-521180 1.01e-05 68_[-2(1.54e-08)]_2 chrIII:78372-78898 1.88e-01 100 chrXVI:339822-340797 2.34e-01 100 chrIV:946100-946632 2.45e-05 62_[-1(1.33e-08)]_8 chrXI:558345-559483 4.87e-01 100 chrIX:255153-257177 4.96e-01 100 chrXIV:510584-511812 8.90e-03 34_[-2(8.07e-06)]_36 chrIV:721056-721603 6.32e-01 100 chrXII:459623-460680 4.13e-01 100 chrIX:254235-254548 1.15e-04 62_[-3(8.77e-09)]_17 chrII:226970-227362 1.04e-06 18_[-1(2.92e-10)]_52 chrXI:458008-459368 8.29e-04 10_[-1(9.61e-08)]_60 chrXVI:108557-114950 4.30e-01 100 chrVII:362401-364455 1.71e-01 100 chrXV:663545-664086 9.89e-13 38_[+1(1.45e-08)]_[-3(8.21e-12)]_11 chrXII:201655-202731 2.96e-01 100 chrVII:794171-794556 6.13e-01 100 chrXV:779712-781211 9.97e-01 100 chrXIII:161733-162691 2.32e-01 100 chrV:85095-87308 2.66e-01 100 chrXVI:572189-572714 6.49e-02 77_[-3(9.58e-05)]_2 chrII:415540-416245 8.09e-01 100 chrIV:555407-556605 1.74e-01 100 chrXV:571754-572134 2.59e-04 63_[-2(2.43e-07)]_7 chrIV:619678-620181 4.85e-01 100 chrXIII:754429-754940 9.08e-01 100 chrVI:210314-210935 6.36e-06 36_[+1(3.20e-09)]_34 chrXII:796995-797915 3.33e-01 100 chrVIII:148926-149287 2.08e-01 100 chrX:542790-542890 6.32e-04 40_[+2(1.40e-07)]_30 chrVII:310130-312759 3.45e-01 100 chrVIII:401006-401765 9.97e-01 100 chrXII:930578-931849 4.05e-02 100 chrXIII:296718-298891 1.19e-01 54_[+3(6.81e-05)]_25 chrXIV:106049-108220 8.69e-01 100 chrXIV:632434-632920 7.86e-08 23_[-1(9.19e-12)]_47 chrII:197143-198280 2.00e-05 8_[+2(1.40e-09)]_62 chrXVI:744072-744612 1.75e-07 41_[-1(3.20e-09)]_29 chrXIII:116983-118934 2.35e-01 100 chrIV:1401214-1403434 9.21e-01 100 chrXV:444607-446385 3.39e-01 100 chrXIII:287982-290029 7.02e-01 100 chrVII:828421-828970 8.87e-08 69_[+1(4.39e-12)]_1 chrXI:609924-611631 4.10e-01 100 chrX:414785-414885 8.37e-01 100 chrVI:180599-181249 9.38e-01 100 chrXVI:256526-257076 9.98e-01 100 chrVI:75304-75865 1.56e-01 100 chrXI:333903-334965 7.64e-01 100 chrXII:875894-876049 4.57e-01 100 chrXII:92349-92732 5.15e-06 57_[-2(8.16e-09)]_13 chrXI:83978-84799 4.53e-01 100 chrV:174360-175043 4.11e-01 100 chrIV:802535-802990 5.52e-12 10_[+1(8.91e-11)]_20_[+2(1.54e-08)]_\ 10 chrVII:185525-185908 6.43e-08 39_[+1(3.19e-11)]_31 chrXIII:379063-379612 3.38e-05 7_[+1(6.67e-09)]_63 chrXIV:63117-64557 8.43e-01 100 chrII:644972-645411 6.35e-01 100 chrXII:611480-612057 7.97e-01 100 chrVII:989800-990300 5.36e-01 100 chrXI:158241-159767 6.28e-01 100 chrXI:578760-579371 1.10e-05 23_[-1(3.51e-09)]_47 chrXII:1028192-1028569 5.05e-01 100 chrIII:30559-31146 8.52e-01 100 chrV:266207-268112 8.91e-01 100 chrXII:515297-516744 3.46e-01 100 chrIV:1013404-1013973 1.58e-01 100 chrXII:242181-243450 2.92e-01 100 chrIII:127512-127883 9.12e-05 68_[-2(1.54e-08)]_2 chrXVI:431987-434129 9.00e-02 100 chrVI:53195-54470 5.69e-01 100 chrXIV:585457-586574 3.35e-01 100 chrVII:766132-766682 1.19e-01 100 chrII:89676-90313 4.67e-01 100 chrXVI:338476-339279 5.45e-08 12_[+1(4.33e-07)]_20_[+2(5.92e-08)]_\ 8 chrXII:962829-963266 3.79e-07 28_[+2(8.24e-11)]_42 chrXV:903776-905768 8.98e-01 100 chrVIII:62546-63269 8.96e-01 100 chrII:405685-406400 3.33e-08 17_[-1(5.92e-12)]_53 chrIII:90842-91182 3.09e-02 23_[+3(9.05e-05)]_56 chrXV:988848-989603 4.80e-03 69_[+2(2.52e-06)]_1 chrIV:117156-118250 5.76e-01 100 chrXV:110845-111204 3.04e-04 29_[+2(1.29e-07)]_41 chrVII:649681-650668 4.10e-01 100 chrXVI:214642-215223 5.30e-01 100 chrXII:628193-628630 1.09e-04 21_[-2(9.09e-09)]_49 chrXVI:810578-811204 9.77e-01 100 chrII:478959-479421 8.56e-01 100 chrV:469265-469938 9.89e-01 100 chrXII:167700-168223 1.04e-06 24_[+1(2.92e-10)]_46 chrXVI:581573-582325 9.03e-01 100 chrXIII:5483-5659 1.00e-07 19_[+3(7.51e-11)]_11_[+3(1.39e-06)]_\ 28 chrXII:373904-374690 9.76e-01 100 chrII:642841-643247 7.70e-10 4_[+1(2.32e-10)]_20_[+2(1.12e-06)]_\ 16 chrIV:220954-222348 4.72e-01 100 chrXVI:879860-880886 8.97e-09 16_[+2(4.62e-13)]_54 chrXIII:91241-92307 4.84e-02 100 chrXV:31109-32218 9.85e-01 100 chrII:266195-266689 5.99e-07 36_[-1(6.94e-11)]_34 chrIX:27468-28046 3.89e-01 100 chrIV:359124-359804 3.31e-01 100 chrVI:167243-167673 8.15e-04 28_[-2(1.40e-07)]_42 chrIX:385747-387087 1.54e-01 100 chrXVI:927771-928080 8.89e-02 100 chrXV:424103-424673 2.71e-01 100 chrXII:1002273-1003357 5.52e-02 100 chrIV:1461363-1461846 3.67e-01 100 chrXV:348872-349230 6.52e-01 100 chrVII:661529-661943 4.65e-05 62_[-2(7.31e-09)]_8 chrXIII:650842-653002 9.85e-01 100 chrVIII:144400-146924 9.46e-01 100 chrIV:489662-490026 9.28e-01 100 chrV:288139-288737 2.31e-07 46_[+1(2.80e-11)]_24 chrVII:479140-482732 2.78e-01 100 chrXV:978694-979535 6.76e-01 100 chrXIII:759086-763149 6.79e-01 100 chrXV:832236-833242 8.94e-01 100 chrX:540731-540831 1.00e+00 100 chrVII:557699-558265 9.87e-01 100 chrX:422695-422795 1.53e-11 3_[-2(2.09e-08)]_21_[-1(3.27e-10)]_\ 16 chrXII:687650-687906 8.45e-01 100 chrXII:300326-301305 1.64e-01 100 chrIV:465181-465747 4.14e-01 100 chrI:166172-166619 9.52e-01 100 chrXIV:374605-375122 1.81e-04 55_[-2(3.09e-08)]_15 chrIV:1150701-1151153 3.00e-06 34_[+2(5.58e-10)]_36 chrVII:497164-497337 5.52e-01 100 chrXI:463360-464991 3.09e-01 100 chrXI:325954-327595 3.30e-01 100 chrV:135158-136055 2.81e-01 100 chrII:59527-61249 9.50e-01 100 chrXV:594305-594692 9.05e-01 100 chrIV:976178-976729 5.27e-01 100 chrIV:644909-645366 1.04e-05 57_[+1(2.91e-09)]_13 chrVII:411906-412573 1.68e-01 100 chrX:606144-606244 4.40e-01 100 chrXI:99712-100088 8.37e-01 100 chrIII:151049-151513 1.40e-08 44_[+1(1.06e-11)]_26 chrXIII:887004-889415 1.40e-01 100 chrVII:882425-883946 7.14e-01 100 chrXIII:504921-505223 1.79e-01 100 chrIV:433814-435099 6.57e-01 100 chrII:413477-415271 3.62e-01 100 chrV:130802-131429 9.50e-12 8_[+1(3.19e-11)]_20_[+2(4.10e-08)]_\ 12 chrVII:533483-535182 3.35e-01 100 chrX:115675-115775 4.03e-09 11_[+1(7.95e-12)]_59 chrIV:129140-130988 9.88e-01 100 chrXII:566449-566780 9.54e-01 100 chrVII:1050232-1050686 5.44e-01 100 chrXIII:302760-303735 8.07e-01 100 chrV:550903-551575 2.87e-01 100 chrVII:254117-254721 9.54e-01 100 chrXIII:24018-25882 5.47e-01 100 chrXII:447913-449043 2.20e-01 100 chrIII:167490-168738 6.68e-01 100 chrVIII:103751-105521 9.47e-01 100 chrX:531572-531672 3.37e-07 17_[-1(5.38e-11)]_53 chrXV:79730-80117 4.25e-01 100 chrX:196729-196829 2.10e-01 100 chrXV:92694-94787 2.46e-01 100 chrXI:355276-357100 9.38e-01 100 chrXIV:95969-96465 2.10e-06 65_[+1(8.91e-11)]_5 chrVIII:74807-76552 7.15e-01 100 chrXIV:528435-530448 9.08e-01 100 chrIII:14172-16924 9.20e-01 100 chrXIV:413531-416272 6.99e-01 100 chrX:382493-382593 1.42e-01 100 chrV:487084-487580 2.72e-05 40_[+1(1.97e-09)]_30 chrXII:949396-954736 2.12e-01 100 chrXVI:828891-829362 5.39e-01 100 chrV:354689-355462 7.20e-01 100 chrVIII:114470-116447 9.56e-01 100 chrI:142139-143716 9.05e-01 100 chrII:350600-351043 5.79e-05 55_[-2(4.10e-08)]_15 chrXI:74415-74880 1.03e-05 26_[-2(1.54e-08)]_44 chrIV:491422-492849 9.01e-01 100 chrX:378229-378329 2.45e-19 1_[-2(1.39e-08)]_1_[+3(8.21e-12)]_\ [-1(5.11e-10)]_17 chrXII:673492-674571 7.79e-03 39_[-3(7.83e-05)]_40 chrXII:568054-571056 6.74e-01 100 chrVII:806156-807794 8.84e-01 100 chrXII:837643-839412 4.27e-01 100 chrXI:617613-619374 4.82e-01 100 chrXVI:66951-67472 3.49e-01 100 chrVII:1000355-1000540 3.04e-01 100 chrXIV:725726-726639 3.06e-08 55_[+2(8.24e-11)]_15 chrIX:126491-130145 4.24e-01 100 chrVIII:122251-122608 1.74e-01 100 chrX:374193-374293 9.85e-11 13_[+2(2.43e-07)]_2_[+1(1.14e-10)]_\ 25 chrXIV:776767-777221 2.26e-01 100 chrXIII:807986-808545 5.45e-04 22_[+1(1.10e-07)]_48 chrXIII:145869-147221 6.47e-01 100 chrXIV:498966-500827 4.61e-01 100 chrVII:422878-423564 1.07e-05 12_[-1(6.10e-09)]_58 chrIII:164100-164278 6.29e-01 100 chrV:434390-435193 3.24e-01 100 chrX:227702-227802 5.59e-03 32_[+3(2.05e-05)]_47 chrVII:364900-366738 8.10e-01 100 chrIX:210664-210990 5.54e-01 100 chrXVI:435642-436182 7.73e-08 22_[+1(7.87e-11)]_48 chrII:504527-505296 8.91e-01 100 chrII:44993-45345 9.34e-02 100 chrXII:369645-371423 6.08e-01 100 chrXV:168093-168518 9.60e-01 100 chrIX:299983-300478 6.43e-08 39_[+1(3.19e-11)]_31 chrV:269178-270232 2.99e-01 100 chrXVI:280564-281912 2.27e-01 100 chrIV:1175747-1176086 5.30e-05 13_[-1(4.64e-09)]_57 chrXV:161111-161732 9.12e-01 100 chrXIII:625844-627268 2.07e-01 100 chrXI:783-1073 2.56e-01 100 chrIV:411258-411665 1.80e-02 100 chrXV:979709-981285 7.90e-01 100 chrX:204553-204653 3.64e-08 28_[-1(5.92e-12)]_42 chrXIII:768180-768445 9.91e-01 100 chrVI:31672-32307 1.18e-01 100 chrXII:734609-734969 1.32e-09 62_[-2(4.62e-13)]_8 chrVI:220001-222062 7.03e-01 100 chrXII:1017604-1019396 9.40e-01 100 chrII:603680-607411 3.59e-01 100 chrXV:866530-868119 9.79e-01 100 chrVII:405467-405943 5.56e-01 100 chrXV:710126-710525 9.94e-01 100 chrXII:241662-242004 9.97e-01 100 chrII:9465-10156 7.20e-01 100 chrXIII:253313-253597 4.01e-01 100 chrII:476656-477742 8.34e-01 100 chrXIII:407876-408784 6.54e-02 100 chrXIV:61954-62937 9.44e-01 100 chrIII:70344-73322 4.62e-01 100 chrIV:1079142-1081653 6.73e-01 100 chrII:83045-83908 9.52e-01 100 chrIV:541210-541958 5.44e-01 100 chrXV:312504-313433 6.25e-01 100 chrIV:229443-231870 1.01e-01 100 chrXVI:718276-719653 3.69e-01 100 chrVIII:16465-18337 4.13e-01 100 chrXV:407490-408237 2.24e-01 100 chrX:523862-523962 6.59e-01 100 chrXI:162023-162724 9.37e-01 100 chrXI:431820-432340 3.18e-01 100 chrXII:498349-499894 4.78e-01 100 chrV:460555-462194 3.75e-01 100 chrXII:874895-875707 1.94e-01 100 chrVIII:174813-176158 9.31e-01 100 chrXVI:696688-697675 6.30e-01 100 chrXVI:279938-280261 2.81e-01 100 chrXI:261035-262725 4.85e-01 100 chrXII:1051924-1052219 8.31e-08 41_[+1(5.92e-12)]_29 chrXV:353747-354307 1.93e-06 55_[+1(7.87e-11)]_15 chrIX:336067-336618 3.86e-09 48_[+1(5.92e-12)]_22 chrV:431011-431938 7.17e-01 100 chrXV:1025760-1026073 2.59e-01 100 chrIX:96790-97035 5.17e-01 100 chrIV:1362226-1362806 1.48e-01 100 chrXVI:575864-576353 8.97e-01 100 chrXIII:586350-586910 1.69e-14 47_[+1(2.07e-10)]_[-3(8.21e-12)]_2 chrXIV:442748-444785 6.25e-01 100 chrXVI:622189-622855 8.23e-05 59_[+1(3.23e-08)]_11 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8.53e-01 100 chrI:71776-73690 3.23e-02 71_[-3(5.05e-05)]_8 chrXV:976380-976889 1.58e-01 100 chrXI:140759-141489 9.91e-01 100 chrXII:1013520-1013709 4.53e-01 100 chrVIII:475409-475914 8.72e-01 100 chrXII:656845-657221 2.66e-01 100 chrX:745070-745170 2.31e-02 100 chrXII:366041-366586 4.62e-01 100 chrX:607916-608016 2.82e-01 100 chrIII:131679-132025 1.42e-01 100 chrX:396568-396668 5.18e-14 5_[+1(9.19e-12)]_19_[+2(1.40e-09)]_\ 16 chrXIII:225121-226692 8.54e-01 100 chrIV:321695-321951 8.31e-01 100 chrXVI:75047-76818 3.12e-02 [-2(8.15e-05)]_70 chrIV:519656-519905 3.01e-08 12_[-2(8.24e-11)]_58 chrXIV:525068-525306 6.40e-01 100 chrII:392602-394819 2.88e-01 100 chrXI:379255-380475 9.99e-01 100 chrIV:1236440-1238674 5.71e-01 100 chrXI:302701-303361 1.96e-05 20_[-1(1.62e-09)]_50 chrXIV:229575-230730 1.52e-01 100 chrXIII:162973-164343 9.98e-01 100 chrXII:347999-348726 9.06e-01 100 chrXI:513039-513594 1.55e-06 57_[+1(1.84e-10)]_13 chrXIII:837760-838308 6.36e-06 10_[-1(3.20e-09)]_60 chrIV:339801-341912 6.15e-01 100 chrVIII:382688-383478 6.51e-01 100 chrIV:794558-794916 5.18e-01 100 chrIV:215868-218095 9.26e-01 100 chrXV:109565-110681 7.23e-01 100 chrII:164624-165546 2.03e-02 68_[+2(9.59e-05)]_2 chrXIV:631695-632127 9.81e-05 26_[+2(2.62e-07)]_44 chrIX:183291-183685 7.88e-11 13_[-1(3.98e-05)]_2_[+2(4.62e-13)]_\ 25 chrVI:63980-65383 9.78e-01 100 chrX:355184-355284 9.85e-11 1_[-1(1.14e-10)]_2_[-2(2.43e-07)]_\ 37 chrXV:409003-409958 5.80e-01 100 chrVII:726361-728179 8.58e-01 100 chrIV:1239376-1240315 5.30e-01 100 chrXV:796743-798865 2.58e-01 100 chrXII:230533-231094 5.51e-02 100 chrV:249769-250815 1.28e-05 43_[-2(1.54e-08)]_27 chrXIII:480368-480813 7.24e-01 100 chrIV:599335-600328 7.60e-01 100 chrXIII:589600-590843 9.93e-01 100 chrII:808412-808805 2.69e-01 100 chrXII:424115-424778 7.36e-01 100 chrXV:281967-282905 9.69e-01 100 chrXVI:645385-645791 2.99e-01 100 chrIII:27461-29341 5.18e-01 100 chrXII:231789-234282 8.36e-01 100 chrXIV:275872-276614 9.48e-01 100 chrIV:488408-489150 3.62e-05 59_[+1(7.29e-09)]_11 chrVIII:388468-389003 4.82e-01 100 chrV:284921-286022 5.69e-01 100 chrIV:358000-358615 7.03e-01 100 chrXV:487188-488322 7.26e-01 100 chrXII:932082-932545 7.13e-01 100 chrXV:216291-216715 1.18e-06 19_[+3(1.49e-09)]_30_[+3(3.10e-05)]_\ 9 chrV:77504-79469 3.19e-02 68_[-3(3.29e-05)]_11 chrXVI:701856-702387 4.50e-01 100 chrXV:80355-81508 7.88e-01 100 chrXII:805369-806828 9.22e-01 100 chrVIII:237464-238132 3.35e-02 100 chrXV:160314-160736 7.22e-01 100 chrVI:157897-158373 9.86e-01 100 chrIX:97239-97538 3.57e-01 100 chrVI:136812-137698 4.67e-01 100 chrXVI:794514-796340 6.15e-01 100 chrII:191347-193636 9.67e-02 100 chrXIV:576679-577598 9.84e-01 100 chrXV:1003954-1004979 9.53e-01 100 chrXV:340112-340597 2.26e-04 37_[+2(6.47e-08)]_33 chrVII:702875-704161 1.79e-01 100 chrX:622118-622218 1.87e-01 100 chrX:453353-453453 3.88e-01 100 chrV:305817-307689 2.88e-01 100 chrXIV:675659-676046 5.60e-02 100 chrXI:38679-39362 8.78e-01 100 chrXIV:721148-723187 9.30e-01 100 chrXI:44886-47001 9.68e-01 100 chrXI:307899-308434 4.95e-15 19_[+1(5.38e-11)]_[-3(8.21e-12)]_30 chrVII:647978-648495 7.64e-01 100 chrVI:191187-191770 2.97e-01 100 chrXIV:662918-665152 5.81e-03 100 chrIV:1345235-1346218 7.82e-01 100 chrVII:914933-916701 5.82e-01 100 chrVII:823341-823718 1.56e-18 2_[-2(1.39e-08)]_1_[+3(8.21e-12)]_\ [-1(3.51e-09)]_16 chrIII:123136-123826 4.71e-01 100 chrVII:483310-483748 5.22e-02 100 chrIV:132485-133162 2.93e-01 100 chrX:415662-415762 6.85e-05 25_[+1(6.67e-09)]_45 chrXI:430597-431632 7.40e-02 100 chrXIII:290582-291134 2.53e-06 42_[-1(3.27e-10)]_28 chrX:703263-703363 6.33e-01 100 chrIII:262705-263170 9.74e-01 100 chrX:391828-391928 9.12e-06 22_[+3(1.73e-05)]_21_[+3(3.43e-09)]_\ 15 chrIII:76-600 6.98e-07 34_[+3(3.14e-10)]_4_[+3(1.23e-06)]_\ 20 chrXVI:699518-700700 3.47e-01 100 chrXIV:568056-568656 9.54e-01 100 chrXII:975765-976204 8.52e-07 40_[+1(2.32e-10)]_30 chrVII:115328-115731 1.39e-07 8_[-2(2.93e-09)]_24_[+1(3.15e-05)]_\ 8 chrXIII:914894-915347 8.80e-01 100 chrXVI:559965-560484 3.11e-04 15_[+1(1.86e-07)]_55 chrXV:464279-464820 1.08e-05 30_[-1(6.10e-09)]_40 chrVIII:134108-134636 1.87e-06 48_[-1(2.61e-10)]_22 chrXIII:878918-880228 2.80e-01 100 chrXIV:738797-740126 6.13e-01 100 chrIV:308007-310214 9.59e-01 100 chrXII:856419-857587 3.28e-01 100 chrII:87929-88608 2.65e-01 100 chrXVI:282078-283258 9.58e-01 100 chrXI:3-176 1.35e-08 6_[+3(7.51e-11)]_73 chrIV:538819-539667 1.73e-01 100 chrIV:992726-993200 2.39e-01 100 chrXI:142956-143371 9.11e-01 100 chrV:23447-24096 1.56e-01 100 chrVII:856545-856930 4.98e-01 100 chrXI:666623-666799 1.60e-07 7_[-3(5.40e-11)]_13_[-3(6.58e-07)]_\ 2_[-3(5.64e-07)]_15 chrXIV:253217-254816 6.86e-01 100 chrII:237715-238146 9.46e-01 100 chrXIV:172646-174692 4.79e-01 100 chrXV:619168-624393 6.40e-01 100 chrX:59003-59103 1.73e-04 11_[+2(1.25e-08)]_59 chrVI:162031-162383 6.14e-06 70_[-2(1.40e-09)] chrIX:388227-388833 9.38e-01 100 chrX:123890-123990 9.54e-03 66_[+3(5.73e-05)]_13 chrI:28634-28889 9.41e-01 100 chrIV:1161493-1161826 1.00e-01 100 chrXIII:510836-512079 7.40e-02 100 chrXII:253721-255300 2.45e-01 100 chrXII:1039237-1042299 1.25e-01 100 chrIV:1355753-1356001 3.70e-01 100 chrXIII:731957-733642 9.64e-01 100 chrVII:738900-739614 5.42e-01 100 chrXVI:209969-210487 1.76e-07 5_[+1(2.13e-11)]_65 chrXIII:736285-737010 3.70e-01 100 chrXII:728331-728586 2.03e-01 100 chrV:311349-312291 5.77e-01 100 chrIV:1305407-1305825 2.04e-05 63_[-2(2.60e-09)]_7 chrXII:1011832-1012319 2.82e-01 100 chrXVI:860160-860711 4.46e-07 42_[-1(2.07e-10)]_28 chrII:372111-375612 2.10e-02 100 chrXV:253816-254725 4.33e-01 100 chrVIII:451250-453085 3.08e-01 100 chrXV:438477-439001 3.74e-07 27_[-1(5.11e-10)]_43 chrVII:276981-278713 4.69e-01 100 chrXVI:868605-868997 6.30e-01 100 chrXIV:518656-519137 9.27e-02 100 chrVII:345805-346722 2.86e-02 46_[-3(6.49e-05)]_33 chrV:490996-492562 7.95e-01 100 chrIV:1269893-1271193 5.12e-01 100 chrX:79141-79241 8.97e-01 100 chrXV:113428-113880 9.18e-01 100 chrXII:783915-784509 8.69e-01 100 chrXI:282616-284869 6.25e-01 100 chrXII:64955-65708 3.87e-01 100 chrVIII:272160-276125 2.21e-01 100 chrIV:1201512-1202028 2.17e-04 29_[-2(1.40e-07)]_41 chrIII:137765-139003 8.35e-02 100 chrXIV:330526-331089 6.82e-01 100 chrV:207358-208032 3.32e-01 100 chrXV:899763-901189 6.18e-01 100 chrVII:515615-518920 2.90e-01 100 chrVII:700202-701273 6.05e-06 47_[-1(1.62e-09)]_23 chrIII:162018-163900 9.12e-01 100 chrII:256333-257978 2.50e-01 100 chrXIII:880414-881157 7.26e-01 100 chrXII:605144-605600 3.50e-01 100 chrXII:253174-253490 1.79e-01 100 chrVIII:562349-562593 1.13e-06 38_[-3(7.51e-11)]_10_[-3(7.51e-11)]_\ 10 chrX:157477-157577 4.94e-01 100 chrIII:177070-178792 7.73e-01 100 chrV:42162-42694 1.55e-01 100 chrII:36232-36602 2.94e-04 30_[-2(5.92e-08)]_40 chrXI:382179-382494 3.74e-03 30_[+3(3.90e-05)]_49 chrXV:854025-854781 3.41e-01 100 chrXIII:851896-852120 3.21e-01 100 chrI:81877-82363 1.85e-01 100 chrIII:149711-150213 1.63e-07 7_[-2(5.92e-08)]_20_[-1(1.44e-06)]_\ 13 chrVIII:411006-411687 6.12e-01 100 chrVI:30861-31462 4.24e-01 100 chrIV:667507-668289 5.15e-01 100 chrXV:159173-160144 6.87e-02 100 chrVIII:34399-36191 1.30e-01 100 chrXI:163340-164460 3.80e-01 100 chrXIV:546180-547702 1.97e-01 100 chrIV:357218-357830 2.15e-07 45_[-3(3.93e-09)]_34 chrVI:222720-224150 4.95e-02 100 chrVII:876164-879042 8.00e-01 100 chrII:592303-593611 8.40e-02 100 chrIII:295317-295954 9.80e-01 100 chrIV:1384494-1385021 8.66e-01 100 chrXII:855218-856263 7.92e-01 100 chrX:233722-233822 2.47e-04 40_[-2(6.47e-08)]_30 chrXVI:378648-378986 8.45e-02 100 chrX:617699-617799 3.86e-07 46_[-2(7.31e-10)]_24 chrXV:226438-226883 7.57e-06 41_[+2(1.40e-09)]_29 chrV:176901-177490 6.55e-07 3_[-1(4.73e-11)]_67 chrXV:252833-253660 5.80e-01 100 chrVII:541712-542192 4.46e-01 100 chrXVI:404475-407922 9.98e-01 100 chrXVI:585864-586280 5.34e-01 100 chrXVI:520021-520524 9.33e-01 100 chrIV:118424-119043 9.52e-01 100 chrXV:287164-288554 5.12e-01 100 chrXIII:499003-500790 3.18e-01 100 chrIX:257396-258146 4.13e-01 100 chrX:122194-122294 5.10e-01 100 chrV:138460-139987 5.04e-01 100 chrXV:1027746-1029515 2.58e-01 100 chrXV:908425-909074 9.47e-02 100 chrV:377483-382068 2.03e-01 100 chrI:222908-223111 6.35e-01 100 chrVII:398512-400138 3.56e-01 100 chrVII:779386-779976 6.23e-04 34_[-1(1.86e-07)]_36 chrXVI:134480-135842 3.08e-01 100 chrX:517652-517752 4.71e-05 39_[+2(5.92e-08)]_31 chrVII:857092-857647 7.61e-04 50_[+1(8.37e-08)]_20 chrV:396165-398119 6.86e-01 100 chrXV:968067-969177 2.88e-01 100 chrVII:609324-610110 9.92e-01 100 chrIV:410163-410814 6.53e-01 100 chrXVI:731665-732331 3.27e-01 100 chrXIII:168240-169524 3.01e-06 29_[-1(3.20e-09)]_41 chrX:354000-354100 1.22e-03 48_[-2(1.40e-07)]_22 chrI:181120-181569 9.89e-02 100 chrX:424268-424368 3.06e-08 47_[+2(8.24e-11)]_23 chrVIII:119647-121679 1.95e-01 100 chrXII:731383-732397 4.20e-01 100 chrV:483016-484174 7.27e-01 100 chrVII:1004037-1004423 1.37e-05 35_[-2(7.31e-09)]_35 chrX:120163-120263 3.56e-01 100 chrX:89865-89965 5.21e-01 100 chrXII:1029093-1030306 6.76e-02 100 chrVII:730969-731453 4.24e-06 27_[-1(1.08e-09)]_43 chrXII:214696-215066 1.64e-06 43_[+1(1.14e-10)]_27 chrXIV:569624-570076 4.43e-09 58_[+1(3.23e-12)]_12 chrIX:99655-100048 9.76e-01 100 chrV:438231-438997 3.84e-01 100 chrXII:818507-819126 9.86e-01 100 chrXIII:572704-573134 2.44e-12 5_[+1(2.80e-11)]_21_[+2(2.09e-08)]_\ 14 chrV:140162-141429 3.88e-01 100 chrVII:401332-401674 1.71e-07 65_[+1(7.95e-12)]_5 chrXVI:502876-503247 7.74e-02 100 chrVII:205320-206206 3.75e-01 100 chrXI:517225-518256 9.91e-01 100 chrIII:107145-107835 9.96e-01 100 chrVII:323431-324123 4.75e-01 100 chrXV:135675-136324 5.45e-01 100 chrIX:394580-395349 5.32e-01 100 chrX:73397-73497 3.75e-01 100 chrXV:925151-925437 7.64e-01 100 chrXII:47298-49096 2.48e-02 70_[-1(9.80e-05)] chrXIII:420272-421004 4.28e-13 21_[-3(8.21e-12)]_1_[+2(1.39e-08)]_\ 27 chrIV:722313-722712 9.97e-01 100 chrX:156137-156237 2.90e-01 100 chrXII:809267-814348 9.97e-01 100 chrVII:255200-255692 2.22e-01 100 chrXIII:131605-132087 7.77e-09 20_[+1(1.14e-10)]_20_[+2(2.22e-05)] chrXVI:775616-776188 5.31e-01 100 chrVIII:358272-358746 2.35e-05 10_[+1(9.48e-09)]_60 chrII:88923-89499 9.18e-01 100 chrXIV:88075-89764 6.06e-01 100 chrXV:383022-383468 6.80e-01 100 chrVI:224328-225332 4.59e-01 100 chrXIII:195939-196293 5.83e-02 100 chrXII:780520-781869 9.30e-01 100 chrX:702930-703030 6.53e-01 100 chrVII:147994-149552 6.96e-01 100 chrXIV:351174-353134 9.47e-01 100 chrVII:531408-532533 6.44e-01 100 chrIV:616461-616794 7.26e-01 100 chrXV:274459-275010 1.73e-04 67_[-1(2.18e-08)]_3 chrIV:330971-333129 6.80e-01 100 chrVII:610509-611493 7.64e-02 100 chrXIII:747622-748161 1.96e-06 42_[+1(1.29e-10)]_28 chrIV:579006-580799 1.38e-01 100 chrXV:28752-30864 6.51e-01 100 chrVII:315764-316035 3.90e-01 100 chrXIV:560153-560990 7.59e-01 100 chrXIV:104587-105460 8.15e-01 100 chrXII:819299-820437 6.50e-02 100 chrIX:426788-428005 4.72e-01 100 chrVII:845269-846045 1.19e-05 41_[-2(1.40e-09)]_29 chrIX:68258-68485 7.73e-01 100 chrXV:722903-724924 8.34e-01 100 chrXI:245725-245966 4.79e-01 100 chrXVI:302657-304363 6.88e-02 100 chrIII:81970-82657 3.20e-02 6_[+1(3.26e-05)]_64 chrXII:282730-283980 9.66e-02 100 chrXIII:752992-754253 4.52e-01 100 chrVIII:381426-382502 7.34e-01 100 chrVII:561154-561720 5.67e-01 100 chrVI:82072-84674 1.33e-01 100 chrIV:1359434-1361329 2.35e-01 100 chrIX:321380-324394 8.82e-02 100 chrXV:300900-302106 2.98e-01 100 chrIX:391144-392148 4.60e-02 100 chrXIII:797802-798258 1.54e-01 100 chrXI:666020-666175 7.69e-01 100 chrX:662455-662555 2.76e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************