******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--SFL1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:374689-375843 1.0000 100 chrVIII:144163-146443 1.0000 100 chrXIV:715611-717064 1.0000 100 chrVII:23844-25935 1.0000 100 chrXI:261105-262069 1.0000 100 chrI:181154-181455 1.0000 100 chrIV:1305384-1305677 1.0000 100 chrXVI:821625-822299 1.0000 100 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chrXV:1053832-1054511 1.0000 100 chrXIII:159266-160347 1.0000 100 chrIV:416573-417143 1.0000 100 chrXI:551906-552794 1.0000 100 chrIV:884276-886205 1.0000 100 chrXVI:700452-700697 1.0000 100 chrXII:711382-712743 1.0000 100 chrVII:882421-884089 1.0000 100 chrV:435632-436005 1.0000 100 chrXV:572275-572431 1.0000 100 chrIII:308688-308960 1.0000 100 chrIV:1161507-1161951 1.0000 100 chrV:268970-270244 1.0000 100 chrXII:703881-704055 1.0000 100 chrVII:779421-779929 1.0000 100 chrXI:611924-612327 1.0000 100 chrX:538485-538585 1.0000 100 chrXI:164967-165470 1.0000 100 chrVII:798587-800253 1.0000 100 chrXIV:63242-64554 1.0000 100 chrVI:227088-227271 1.0000 100 chrXII:720513-721428 1.0000 100 chrIV:540693-541952 1.0000 100 chrI:222909-223074 1.0000 100 chrVII:857049-857579 1.0000 100 chrXIV:301018-302324 1.0000 100 chrVIII:491903-493640 1.0000 100 chrIX:248499-249342 1.0000 100 chrXIV:506961-507644 1.0000 100 chrX:519384-519484 1.0000 100 chrXV:796657-798760 1.0000 100 chrVII:147948-149019 1.0000 100 chrXIV:585442-586841 1.0000 100 chrXV:908152-911637 1.0000 100 chrV:99911-100333 1.0000 100 chrVII:287166-287791 1.0000 100 chrV:241937-242428 1.0000 100 chrV:23419-23854 1.0000 100 chrIX:97979-99462 1.0000 100 chrX:435530-435630 1.0000 100 chrXVI:435631-436152 1.0000 100 chrVII:648000-648494 1.0000 100 chrIX:299994-300473 1.0000 100 chrIII:127552-127860 1.0000 100 chrIV:720587-721587 1.0000 100 chrIV:338346-341225 1.0000 100 chrIV:1344681-1346068 1.0000 100 chrXVI:644613-644995 1.0000 100 chrXV:779851-781019 1.0000 100 chrVIII:174791-175711 1.0000 100 chrX:120299-120399 1.0000 100 chrVI:19261-19940 1.0000 100 chrV:207378-207989 1.0000 100 chrXIII:651442-653018 1.0000 100 chrXIV:771652-772461 1.0000 100 chrXII:214667-215045 1.0000 100 chrXV:726034-726278 1.0000 100 chrXI:512992-513607 1.0000 100 chrXII:96085-96311 1.0000 100 chrXI:518837-521099 1.0000 100 chrXII:440437-441712 1.0000 100 chrXIII:701982-703314 1.0000 100 chrIV:1245675-1246130 1.0000 100 chrXI:613221-613600 1.0000 100 chrXII:498814-500171 1.0000 100 chrXIII:168687-169040 1.0000 100 chrXI:230918-231591 1.0000 100 chrII:254700-255876 1.0000 100 chrIV:427629-428739 1.0000 100 chrVI:210321-210878 1.0000 100 chrVII:915422-917137 1.0000 100 chrXII:242185-243522 1.0000 100 chrXV:980113-981424 1.0000 100 chrV:249809-250861 1.0000 100 chrXV:113448-114997 1.0000 100 chrVII:661489-661888 1.0000 100 chrIV:433978-435124 1.0000 100 chrXIV:480650-481241 1.0000 100 chrIV:1269887-1271140 1.0000 100 chrIV:491457-492795 1.0000 100 chrX:651874-651974 1.0000 100 chrVIII:104274-105525 1.0000 100 chrXIII:671521-674827 1.0000 100 chrIV:721772-722877 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--SFL1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--SFL1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--SFL1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.303 C 0.197 G 0.197 T 0.303 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--SFL1/background): A 0.308 C 0.192 G 0.192 T 0.308 ******************************************************************************** ******************************************************************************** MOTIF TCCSSGGTTCGATYCCSSKHBGG MEME-1 width = 23 sites = 65 llr = 1011 E-value = 3.1e-149 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCCSSGGTTCGATYCCSSKHBGG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 3:2:12::::3a2::::2:2221 pos.-specific C 175431:::a::23a75324212 probability G 1:2458a:::7:2::1445:456 matrix T 63121::aa:::46:22:34221 bits 2.4 * 2.1 * * * 1.9 * * * 1.7 * ** * * Relative 1.4 **** * * Entropy 1.2 * ******* ** (22.4 bits) 1.0 * ******* ** 0.7 * * ******* ***** 0.5 *********** ******* * 0.2 ************ ********** 0.0 ----------------------- Multilevel TCCCGGGTTCGATTCCCGGCGGG consensus ATAGC A AC TGCTTCT sequence GT C A AT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCSSGGTTCGATYCCSSKHBGG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------- chrV:249809-250861 + 46 6.03e-11 GATCCGGACA ACCCCGGTTCGAATCCGGGTAGG ACCTTTTTTA chrIII:168101-168509 - 50 6.03e-11 GATCCGGACA ACCCCGGTTCGAATCCGGGTAGG ACCTTTTTTT chrIV:802568-802979 - 12 6.03e-11 GATCCGGACA ACCCCGGTTCGAATCCGGGTAGG ACCTCTTTTT chrXV:281984-282405 + 64 1.22e-10 CATCGTTGGG CCCCCGGTTCGATTCCGGGCTTG CGCATTTCTT chrX:396578-396678 - 32 1.22e-10 CATCGTTGGG CCCCCGGTTCGATTCCGGGCTTG CGCATTTCTT chrX:531609-531709 + 13 1.22e-10 CATCGTTGGG CCCCCGGTTCGATTCCGGGCTTG CGCAGTTTCT chrXIII:807992-808550 - 29 1.45e-10 GATCCGAACA ACCCCAGTTCGAATCCGGGTGGG ACCTTCCCTT chrXIII:290564-291173 + 28 9.38e-10 CACCGTGGAG ACCGGGGTTCGACTCCCCGTATC GGAGTCTTCT chrV:487078-487546 - 73 9.38e-10 TGGAG ACCGGGGTTCGACTCCCCGTATC GGAGTATTCG chrXVI:209976-210458 - 29 9.38e-10 CACCGTGGAG ACCGGGGTTCGACTCCCCGTATC GGAGTTTTCT chrXII:797004-797433 + 55 9.38e-10 CACCGTGGAG ACCGGGGTTCGACTCCCCGTATC GGAGATATAT chrIV:488436-489134 - 66 1.08e-09 ACGGCGAAGA TCCCGAGTTCGAACCTCGGTTGG ATCAGAATCT chrXIII:463326-463884 + 44 1.44e-09 CGCGTGCCAG ATCGGGGTTCAATTCCCCGTCGC GGAGATTTTT chrII:405705-406390 + 8 1.44e-09 GTGCCAG ATCGGGGTTCAATTCCCCGTCGC GGAGATTTTT chrX:204556-204656 + 60 1.44e-09 CGCGTGCCAG ATCGGGGTTCAATTCCCCGTCGC GGAGATTTTT chrIX:336122-336619 - 33 1.44e-09 CGCGTGCCAG ATCGGGGTTCAATTCCCCGTCGC GGAGATTTTT chrXII:426947-427436 + 36 1.44e-09 CGCGTGCCAG ATCGGGGTTCAATTCCCCGTCGC GGAGAATTTT chrXIV:569698-570049 - 48 1.89e-09 AACGCGGGGA TCAGCGGTTCGATCCCGCTAGAG ACCATTCTTT chrXII:1051917-1052194 - 70 1.89e-09 CGCGGGGA TCAGCGGTTCGATCCCGCTAGAG ACCATTATTT chrIV:667751-668222 - 75 1.89e-09 GGA TCAGCGGTTCGATCCCGCTAGAG ACCATTTTTA chrV:492202-492550 - 30 2.16e-09 AACCAGAAGA TTCCAGGTTCAAGTCCTGGCGGG GAAGGATTAT chrXI:490743-491352 + 17 2.16e-09 AACCAGAAGA TTCCAGGTTCAAGTCCTGGCGGG GAAGAATTTT chrIV:619746-620165 - 68 2.16e-09 AACCAGAAGA TTCCAGGTTCAAGTCCTGGCGGG GAAGATTTTT chrXII:818565-818729 + 57 5.32e-09 GGTGGCTGTG ATCCGGGTTCGAGTCCCGGGAGG AGCTTTTAAT chrXV:980113-981424 + 43 6.01e-09 ATGCGAGAGG CCCTGGGTTCAATTCCCAGCTCG CCCCTTTTTT chrXIII:195948-196281 - 8 6.01e-09 ATGCGAGAGG CCCTGGGTTCAATTCCCAGCTCG CCCCTTT chrXI:578687-579364 + 59 7.65e-09 TACCGAAATG TCAGGGGTTCGAGCCCCCTATGA GGAGTTCTTT chrVII:823352-823705 + 51 9.68e-09 ACGCAGAACG TCCCCAGTTCGATCCTGGGCGAA ATCATTTTTT chrXI:307926-308453 - 9 9.68e-09 ACGCAGAACG TCCCCAGTTCGATCCTGGGCGAA ATCAATTT chrVII:411991-412559 - 73 9.68e-09 GAACG TCCCCAGTTCGATCCTGGGCGAA ATCAAGTTTT chrX:378238-378338 + 74 9.68e-09 ACGCAGAACG TCCCCAGTTCGATCCTGGGCGAA ATCA chrVII:779421-779929 + 36 1.09e-08 CAAGGTGGGG ACACGGGTTCGATTCTCGTACCG CTCAAGATTA chrXIV:96013-96436 - 71 1.09e-08 GGTGGGG ACACGGGTTCGATTCTCGTACCG CTCAAATTTT chrIX:299994-300473 - 49 1.37e-08 AATCATAAGG TTAGGGGTTCGAGCCCCCTACAG GGCTATCTTT chrIII:151132-151498 - 23 1.37e-08 AATCATAAGG TTAGGGGTTCGAGCCCCCTACAG GGCTTTCTTT chrVI:226429-226907 - 74 1.37e-08 AAGG TTAGGGGTTCGAGCCCCCTACAG GGCTTATCTC chrX:355195-355295 + 4 1.37e-08 AGA TTATGGGTTCGACCCCCATCGTG AGTGCTTTGT chrXIII:131594-132060 - 52 1.37e-08 AATCAGAAGA TTATGGGTTCGACCCCCATCGTG AGTGCTTTGT chrX:374179-374279 - 45 1.37e-08 AATCAGAAGA TTATGGGTTCGACCCCCATCGTG AGTGCTTTGT chrVI:210321-210878 - 74 1.53e-08 GAGA TCGGGCGTTCGACTCGCCCCCGG GAGATATTTT chrXIII:168687-169040 + 44 1.53e-08 AATCTTGAGA TCGGGCGTTCGACTCGCCCCCGG GAGATATTTT chrXIII:837771-838274 + 18 1.53e-08 AATCTTGAGA TCGGGCGTTCGACTCGCCCCCGG GAGATATTTT chrIV:946176-946571 + 51 1.53e-08 AATCTTGAGA TCGGGCGTTCGACTCGCCCCCGG GAGATTTTTT chrXVI:856746-857159 + 46 2.36e-08 ATGGGAGAGG TCTCCGGTTCGATTCCGGACTCG TCCATTTTAA chrXIII:321024-321300 - 39 2.36e-08 ATGGGAGAGG TCTCCGGTTCGATTCCGGACTCG TCCATTTTTT chrXVI:435631-436152 - 56 9.46e-08 AATCTGTTGG TCCTTAGTTCGATCCTGAGTGCG AGCTTTCTTT chrII:642856-643220 - 23 9.46e-08 AATCTGTTGG TCCTTAGTTCGATCCTGAGTGCG AGCTTCTTTT chrXV:353880-354289 - 11 9.46e-08 AATGTGGAGA TCATCGGTTCAAATCCGATTGGA AGCATTTTTT chrII:266221-266703 + 12 9.46e-08 AATGTGGAGA TCATCGGTTCAAATCCGATTGGA AGCATTTTTT chrVII:730979-731386 + 52 9.46e-08 AATCGCAAGA TCGTGAGTTCAACCCTCACTGGG GTCGTTTTTT chrXII:975780-976162 - 66 9.46e-08 AATCGCAAGA TCGTGAGTTCAACCCTCACTGGG GTCGTTTATT chrX:415719-415819 - 24 1.62e-07 AATCGAAGGG TTGCAGGTTCAATTCCTGTCCGT TTCAATTTAT chrVI:191263-191767 - 52 2.09e-07 GGTTTTACCT GCGCAGGTTCGAATCCTGTCTGT GACGCATTTC chrXIII:572619-573160 - 48 2.91e-07 AATCTGAAGG TCGAGAGTTCGAACCTCCCCTGG AGCACATTTT chrIX:248499-249342 + 35 3.99e-07 GGCTCTGCCC GCGCTGGTTCAAATCCTGCTGGT GTCGTTATTT chrXVI:689412-689847 + 41 3.99e-07 GGCTCTGCCC GCGCTGGTTCAAATCCTGCTGGT GTCGTATTAT chrIV:437578-438093 + 42 4.66e-07 GGCTTTGCCC GCGCAGGTTCGAGTCCTGCAGTT GTCGTCATTT chrXIII:362954-363289 + 38 8.40e-07 GGCCGATGAA ACCCTGGTTCGATTCTAGGAGAT GGCATTTTCT chrII:347427-347918 - 35 9.01e-07 TACTGAAGGA TGCGAGGTTCGAACTCGCGCGGA CAACCGTCCA chrXIV:776575-777415 + 25 1.36e-06 AAAATAAAGT TCCCGGGGTCAATTTCTGGTAGT GGCAAGCAAA chrVII:483303-483756 + 9 1.66e-06 TCGCCGGA TCTCCGCTTCGAGACCGGGTTTG TTTTCAAATT chrXVI:744081-744582 + 48 2.42e-06 AATGCAAAGG TCGTTAGTTCAATTCTGACAGGT GGCAAAATTT chrXV:722879-724837 - 38 8.39e-06 ATATGTCTAA TTTGAGGTTCGAAACCCATATCC AACATTCTAT chrII:136054-136304 - 31 2.51e-05 ACAACTACAA ATCTGGGGTAAAGTCCGACTTTC GGCCCGCCGT chrVII:915422-917137 + 18 5.54e-05 GAGGTGAAGA CCGGTGGTGCCATCCCTGACAAA GGAAGAAGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCSSGGTTCGATYCCSSKHBGG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:249809-250861 6e-11 45_[+1]_32 chrIII:168101-168509 6e-11 49_[-1]_28 chrIV:802568-802979 6e-11 11_[-1]_66 chrXV:281984-282405 1.2e-10 63_[+1]_14 chrX:396578-396678 1.2e-10 31_[-1]_46 chrX:531609-531709 1.2e-10 12_[+1]_65 chrXIII:807992-808550 1.4e-10 28_[-1]_49 chrXIII:290564-291173 9.4e-10 27_[+1]_50 chrV:487078-487546 9.4e-10 72_[-1]_5 chrXVI:209976-210458 9.4e-10 28_[-1]_49 chrXII:797004-797433 9.4e-10 54_[+1]_23 chrIV:488436-489134 1.1e-09 65_[-1]_12 chrXIII:463326-463884 1.4e-09 43_[+1]_34 chrII:405705-406390 1.4e-09 7_[+1]_70 chrX:204556-204656 1.4e-09 59_[+1]_18 chrIX:336122-336619 1.4e-09 32_[-1]_45 chrXII:426947-427436 1.4e-09 35_[+1]_42 chrXIV:569698-570049 1.9e-09 47_[-1]_30 chrXII:1051917-1052194 1.9e-09 69_[-1]_8 chrIV:667751-668222 1.9e-09 74_[-1]_3 chrV:492202-492550 2.2e-09 29_[-1]_48 chrXI:490743-491352 2.2e-09 16_[+1]_61 chrIV:619746-620165 2.2e-09 67_[-1]_10 chrXII:818565-818729 5.3e-09 56_[+1]_21 chrXV:980113-981424 6e-09 42_[+1]_35 chrXIII:195948-196281 6e-09 7_[-1]_70 chrXI:578687-579364 7.6e-09 58_[+1]_19 chrVII:823352-823705 9.7e-09 50_[+1]_27 chrXI:307926-308453 9.7e-09 8_[-1]_69 chrVII:411991-412559 9.7e-09 72_[-1]_5 chrX:378238-378338 9.7e-09 73_[+1]_4 chrVII:779421-779929 1.1e-08 35_[+1]_42 chrXIV:96013-96436 1.1e-08 70_[-1]_7 chrIX:299994-300473 1.4e-08 48_[-1]_29 chrIII:151132-151498 1.4e-08 22_[-1]_55 chrVI:226429-226907 1.4e-08 73_[-1]_4 chrX:355195-355295 1.4e-08 3_[+1]_74 chrXIII:131594-132060 1.4e-08 51_[-1]_26 chrX:374179-374279 1.4e-08 44_[-1]_33 chrVI:210321-210878 1.5e-08 73_[-1]_4 chrXIII:168687-169040 1.5e-08 43_[+1]_34 chrXIII:837771-838274 1.5e-08 17_[+1]_60 chrIV:946176-946571 1.5e-08 50_[+1]_27 chrXVI:856746-857159 2.4e-08 45_[+1]_32 chrXIII:321024-321300 2.4e-08 38_[-1]_39 chrXVI:435631-436152 9.5e-08 55_[-1]_22 chrII:642856-643220 9.5e-08 22_[-1]_55 chrXV:353880-354289 9.5e-08 10_[-1]_67 chrII:266221-266703 9.5e-08 11_[+1]_66 chrVII:730979-731386 9.5e-08 51_[+1]_26 chrXII:975780-976162 9.5e-08 65_[-1]_12 chrX:415719-415819 1.6e-07 23_[-1]_54 chrVI:191263-191767 2.1e-07 51_[-1]_26 chrXIII:572619-573160 2.9e-07 47_[-1]_30 chrIX:248499-249342 4e-07 34_[+1]_43 chrXVI:689412-689847 4e-07 40_[+1]_37 chrIV:437578-438093 4.7e-07 41_[+1]_36 chrXIII:362954-363289 8.4e-07 37_[+1]_40 chrII:347427-347918 9e-07 34_[-1]_43 chrXIV:776575-777415 1.4e-06 24_[+1]_53 chrVII:483303-483756 1.7e-06 8_[+1]_69 chrXVI:744081-744582 2.4e-06 47_[+1]_30 chrXV:722879-724837 8.4e-06 37_[-1]_40 chrII:136054-136304 2.5e-05 30_[-1]_47 chrVII:915422-917137 5.5e-05 17_[+1]_60 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCSSGGTTCGATYCCSSKHBGG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCCSSGGTTCGATYCCSSKHBGG width=23 seqs=65 chrV:249809-250861 ( 46) ACCCCGGTTCGAATCCGGGTAGG 1 chrIII:168101-168509 ( 50) ACCCCGGTTCGAATCCGGGTAGG 1 chrIV:802568-802979 ( 12) ACCCCGGTTCGAATCCGGGTAGG 1 chrXV:281984-282405 ( 64) CCCCCGGTTCGATTCCGGGCTTG 1 chrX:396578-396678 ( 32) CCCCCGGTTCGATTCCGGGCTTG 1 chrX:531609-531709 ( 13) CCCCCGGTTCGATTCCGGGCTTG 1 chrXIII:807992-808550 ( 29) ACCCCAGTTCGAATCCGGGTGGG 1 chrXIII:290564-291173 ( 28) ACCGGGGTTCGACTCCCCGTATC 1 chrV:487078-487546 ( 73) ACCGGGGTTCGACTCCCCGTATC 1 chrXVI:209976-210458 ( 29) ACCGGGGTTCGACTCCCCGTATC 1 chrXII:797004-797433 ( 55) ACCGGGGTTCGACTCCCCGTATC 1 chrIV:488436-489134 ( 66) TCCCGAGTTCGAACCTCGGTTGG 1 chrXIII:463326-463884 ( 44) ATCGGGGTTCAATTCCCCGTCGC 1 chrII:405705-406390 ( 8) ATCGGGGTTCAATTCCCCGTCGC 1 chrX:204556-204656 ( 60) ATCGGGGTTCAATTCCCCGTCGC 1 chrIX:336122-336619 ( 33) ATCGGGGTTCAATTCCCCGTCGC 1 chrXII:426947-427436 ( 36) ATCGGGGTTCAATTCCCCGTCGC 1 chrXIV:569698-570049 ( 48) TCAGCGGTTCGATCCCGCTAGAG 1 chrXII:1051917-1052194 ( 70) TCAGCGGTTCGATCCCGCTAGAG 1 chrIV:667751-668222 ( 75) TCAGCGGTTCGATCCCGCTAGAG 1 chrV:492202-492550 ( 30) TTCCAGGTTCAAGTCCTGGCGGG 1 chrXI:490743-491352 ( 17) TTCCAGGTTCAAGTCCTGGCGGG 1 chrIV:619746-620165 ( 68) TTCCAGGTTCAAGTCCTGGCGGG 1 chrXII:818565-818729 ( 57) ATCCGGGTTCGAGTCCCGGGAGG 1 chrXV:980113-981424 ( 43) CCCTGGGTTCAATTCCCAGCTCG 1 chrXIII:195948-196281 ( 8) CCCTGGGTTCAATTCCCAGCTCG 1 chrXI:578687-579364 ( 59) TCAGGGGTTCGAGCCCCCTATGA 1 chrVII:823352-823705 ( 51) TCCCCAGTTCGATCCTGGGCGAA 1 chrXI:307926-308453 ( 9) TCCCCAGTTCGATCCTGGGCGAA 1 chrVII:411991-412559 ( 73) TCCCCAGTTCGATCCTGGGCGAA 1 chrX:378238-378338 ( 74) TCCCCAGTTCGATCCTGGGCGAA 1 chrVII:779421-779929 ( 36) ACACGGGTTCGATTCTCGTACCG 1 chrXIV:96013-96436 ( 71) ACACGGGTTCGATTCTCGTACCG 1 chrIX:299994-300473 ( 49) TTAGGGGTTCGAGCCCCCTACAG 1 chrIII:151132-151498 ( 23) TTAGGGGTTCGAGCCCCCTACAG 1 chrVI:226429-226907 ( 74) TTAGGGGTTCGAGCCCCCTACAG 1 chrX:355195-355295 ( 4) TTATGGGTTCGACCCCCATCGTG 1 chrXIII:131594-132060 ( 52) TTATGGGTTCGACCCCCATCGTG 1 chrX:374179-374279 ( 45) TTATGGGTTCGACCCCCATCGTG 1 chrVI:210321-210878 ( 74) TCGGGCGTTCGACTCGCCCCCGG 1 chrXIII:168687-169040 ( 44) TCGGGCGTTCGACTCGCCCCCGG 1 chrXIII:837771-838274 ( 18) TCGGGCGTTCGACTCGCCCCCGG 1 chrIV:946176-946571 ( 51) TCGGGCGTTCGACTCGCCCCCGG 1 chrXVI:856746-857159 ( 46) TCTCCGGTTCGATTCCGGACTCG 1 chrXIII:321024-321300 ( 39) TCTCCGGTTCGATTCCGGACTCG 1 chrXVI:435631-436152 ( 56) TCCTTAGTTCGATCCTGAGTGCG 1 chrII:642856-643220 ( 23) TCCTTAGTTCGATCCTGAGTGCG 1 chrXV:353880-354289 ( 11) TCATCGGTTCAAATCCGATTGGA 1 chrII:266221-266703 ( 12) TCATCGGTTCAAATCCGATTGGA 1 chrVII:730979-731386 ( 52) TCGTGAGTTCAACCCTCACTGGG 1 chrXII:975780-976162 ( 66) TCGTGAGTTCAACCCTCACTGGG 1 chrX:415719-415819 ( 24) TTGCAGGTTCAATTCCTGTCCGT 1 chrVI:191263-191767 ( 52) GCGCAGGTTCGAATCCTGTCTGT 1 chrXIII:572619-573160 ( 48) TCGAGAGTTCGAACCTCCCCTGG 1 chrIX:248499-249342 ( 35) GCGCTGGTTCAAATCCTGCTGGT 1 chrXVI:689412-689847 ( 41) GCGCTGGTTCAAATCCTGCTGGT 1 chrIV:437578-438093 ( 42) GCGCAGGTTCGAGTCCTGCAGTT 1 chrXIII:362954-363289 ( 38) ACCCTGGTTCGATTCTAGGAGAT 1 chrII:347427-347918 ( 35) TGCGAGGTTCGAACTCGCGCGGA 1 chrXIV:776575-777415 ( 25) TCCCGGGGTCAATTTCTGGTAGT 1 chrVII:483303-483756 ( 9) TCTCCGCTTCGAGACCGGGTTTG 1 chrXVI:744081-744582 ( 48) TCGTTAGTTCAATTCTGACAGGT 1 chrXV:722879-724837 ( 38) TTTGAGGTTCGAAACCCATATCC 1 chrII:136054-136304 ( 31) ATCTGGGGTAAAGTCCGACTTTC 1 chrVII:915422-917137 ( 18) CCGGTGGTGCCATCCCTGACAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCSSGGTTCGATYCCSSKHBGG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 23 n= 46800 bayes= 11.6459 E= 3.1e-149 -15 -106 -164 89 -1267 188 -364 -15 -52 140 17 -232 -432 116 88 -62 -132 61 131 -152 -74 -164 197 -1267 -1267 -364 236 -1267 -1267 -1267 -264 165 -1267 -1267 -364 168 -432 236 -1267 -1267 0 -364 182 -1267 170 -1267 -1267 -1267 -62 6 -18 48 -332 82 -1267 103 -1267 233 -1267 -332 -1267 191 -164 -52 -432 126 94 -100 -52 82 122 -1267 -274 -6 140 -24 -62 106 -364 32 -100 26 106 -52 -74 -47 131 -62 -115 -18 157 -132 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCSSGGTTCGATYCCSSKHBGG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 23 nsites= 65 E= 3.1e-149 0.276923 0.092308 0.061538 0.569231 0.000000 0.707692 0.015385 0.276923 0.215385 0.507692 0.215385 0.061538 0.015385 0.430769 0.353846 0.200000 0.123077 0.292308 0.476923 0.107692 0.184615 0.061538 0.753846 0.000000 0.000000 0.015385 0.984615 0.000000 0.000000 0.000000 0.030769 0.969231 0.000000 0.000000 0.015385 0.984615 0.015385 0.984615 0.000000 0.000000 0.307692 0.015385 0.676923 0.000000 1.000000 0.000000 0.000000 0.000000 0.200000 0.200000 0.169231 0.430769 0.030769 0.338462 0.000000 0.630769 0.000000 0.969231 0.000000 0.030769 0.000000 0.723077 0.061538 0.215385 0.015385 0.461538 0.369231 0.153846 0.215385 0.338462 0.446154 0.000000 0.046154 0.184615 0.507692 0.261538 0.200000 0.400000 0.015385 0.384615 0.153846 0.230769 0.400000 0.215385 0.184615 0.138462 0.476923 0.200000 0.138462 0.169231 0.569231 0.123077 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCSSGGTTCGATYCCSSKHBGG MEME-1 regular expression -------------------------------------------------------------------------------- [TA][CT][CAG][CGT][GC]GGTTC[GA]A[TAC][TC]C[CT][CG][GCA][GT][CTA][GCT][GT]G -------------------------------------------------------------------------------- Time 355.15 secs. ******************************************************************************** ******************************************************************************** MOTIF GSKYBYDTGGYBYAGTBGKTW MEME-2 width = 21 sites = 37 llr = 590 E-value = 1.2e-065 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSKYBYDTGGYBYAGTBGKTW MEME-2 Description -------------------------------------------------------------------------------- Simplified A :1::213:3:::1a1::::25 pos.-specific C :42534::::544:::3:::: probability G a531214:7a:4::9:4a611 matrix T ::54443a::525::a3:474 bits 2.4 * * 2.1 * * * 1.9 * * * * 1.7 * * * *** * Relative 1.4 * * * *** * Entropy 1.2 * *** *** ** (23.0 bits) 1.0 ** **** *** ** 0.7 ** * ***** ******* 0.5 **** ************** 0.2 **** **************** 0.0 --------------------- Multilevel GGTCTTGTGGCCTAGTGGGTA consensus CGTCCT A TGC T TAT sequence C A T C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSKYBYDTGGYBYAGTBGKTW MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXII:656839-657193 - 20 3.71e-11 CAAGAAAATT GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrVII:773977-774714 + 54 3.71e-11 TCAATTAATT GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrIX:183316-183680 - 45 2.63e-10 ACAAATTCCT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrXII:734629-734930 + 73 2.63e-10 AACAAAGTTT GGTCTCTTGGCCCAGTTGGTT AAGGCAC chrII:197134-197796 + 79 2.63e-10 CAGTAATCAA GGTCTCTTGGCCCAGTTGGTT A chrVII:823352-823705 + 4 6.43e-10 AGT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrXV:663513-664257 - 30 6.43e-10 AACAAATAGT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrXI:307926-308453 - 58 6.43e-10 ACAATTAAGT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrX:378238-378338 + 27 6.43e-10 TAAATTAATA GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrXIII:586389-587013 - 38 6.43e-10 AACTTACTAT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrV:249809-250861 + 1 4.34e-09 . GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrXIII:807992-808550 - 76 4.34e-09 AAAA GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrIV:520737-521157 + 75 4.34e-09 TCCATTTTAG GGTCCTATAGTGTAGTGGTTA TCACT chrIV:802568-802979 - 59 4.34e-09 ATGAATTGTC GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrI:139029-139367 + 4 5.77e-09 TAC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrVI:101045-101727 + 40 5.77e-09 ACAATAATTC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXV:353880-354289 - 59 8.61e-09 ACGGTTTACT GCTTCTATGGCCAAGTTGGTA AGGCGCCACA chrXV:110847-111179 - 50 1.57e-08 CAATTAACCC GGGCGGTTAGTGTAGTGGTTA TCATCCCACC chrII:350556-351046 + 76 1.57e-08 TCAATAAAAG GGTTTTATAGTGTAGTGGTTA TCAC chrXVI:775664-776022 - 23 2.42e-08 TAATTCAAAA GCTCGTATGGCGCAGTGGTAG CGCAGCAGAT chrII:642856-643220 - 70 2.42e-08 GTAATAGAAA GCTCGTATGGCGCAGTGGTAG CGCAGCAGAT chrV:435632-436005 - 36 6.63e-08 AACAATAAGA GCCTTGTTGGCGCAATCGGTA GCGCGTATGA chrIII:151132-151498 - 71 6.63e-08 AATTAAAGA GCCTTGTTGGCGCAATCGGTA GCGCGTATGA chrIV:1351977-1353063 - 48 6.63e-08 CAACGAAATA GCCTTGTTGGCGCAATCGGTA GCGCGTATGA chrXV:281984-282405 + 20 8.41e-08 ACATGAAAGC GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrX:396578-396678 - 78 8.41e-08 AA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrXII:47296-48647 - 64 8.41e-08 CGAAGACGAA GCTGCTTTGGCTAAGTTGGTT TCCACCATTG chrVI:162061-162367 + 64 8.41e-08 AAGAAAACAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrIII:127552-127860 + 60 1.05e-07 AAGATAAAAT GACTCCATGGCCAAGTTGGTT AAGGCGTGCG chrXI:74439-74804 + 53 1.05e-07 ATAGCAATTA GACTCCATGGCCAAGTTGGTT AAGGCGTGCG chrVII:730979-731386 + 5 1.05e-07 AAAA GACTCCATGGCCAAGTTGGTT AAGGCGTGCG chrXVI:744081-744582 + 3 1.82e-07 AA GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrXII:818565-818729 + 12 2.93e-07 AATTTATTAT GCTCCTCTAGTGCAATGGTTA GCATGCATTC chrIV:1256890-1257283 - 23 3.26e-07 GATCTTCTTA GCGAAAGTGGTTCAGTGGTTA GAATTCATGC chrXIV:374672-375083 + 42 4.02e-07 AGAAAAATAA GCGGACTTAGCTCAGTTGGGA GAGCGCCAGA chrII:36264-36516 + 58 4.65e-07 TCAGTTGTAA GCGGATTTAGCTCAGTTGGGA GAGCGCCAGA chrVII:115345-115705 + 13 7.21e-07 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTA GAGCGTTCGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSKYBYDTGGYBYAGTBGKTW MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:656839-657193 3.7e-11 19_[-2]_60 chrVII:773977-774714 3.7e-11 53_[+2]_26 chrIX:183316-183680 2.6e-10 44_[-2]_35 chrXII:734629-734930 2.6e-10 72_[+2]_7 chrII:197134-197796 2.6e-10 78_[+2]_1 chrVII:823352-823705 6.4e-10 3_[+2]_76 chrXV:663513-664257 6.4e-10 29_[-2]_50 chrXI:307926-308453 6.4e-10 57_[-2]_22 chrX:378238-378338 6.4e-10 26_[+2]_53 chrXIII:586389-587013 6.4e-10 37_[-2]_42 chrV:249809-250861 4.3e-09 [+2]_79 chrXIII:807992-808550 4.3e-09 75_[-2]_4 chrIV:520737-521157 4.3e-09 74_[+2]_5 chrIV:802568-802979 4.3e-09 58_[-2]_21 chrI:139029-139367 5.8e-09 3_[+2]_76 chrVI:101045-101727 5.8e-09 39_[+2]_40 chrXV:353880-354289 8.6e-09 58_[-2]_21 chrXV:110847-111179 1.6e-08 49_[-2]_30 chrII:350556-351046 1.6e-08 75_[+2]_4 chrXVI:775664-776022 2.4e-08 22_[-2]_57 chrII:642856-643220 2.4e-08 69_[-2]_10 chrV:435632-436005 6.6e-08 35_[-2]_44 chrIII:151132-151498 6.6e-08 70_[-2]_9 chrIV:1351977-1353063 6.6e-08 47_[-2]_32 chrXV:281984-282405 8.4e-08 19_[+2]_60 chrX:396578-396678 8.4e-08 77_[-2]_2 chrXII:47296-48647 8.4e-08 63_[-2]_16 chrVI:162061-162367 8.4e-08 63_[+2]_16 chrIII:127552-127860 1.1e-07 59_[+2]_20 chrXI:74439-74804 1.1e-07 52_[+2]_27 chrVII:730979-731386 1.1e-07 4_[+2]_75 chrXVI:744081-744582 1.8e-07 2_[+2]_77 chrXII:818565-818729 2.9e-07 11_[+2]_68 chrIV:1256890-1257283 3.3e-07 22_[-2]_57 chrXIV:374672-375083 4e-07 41_[+2]_38 chrII:36264-36516 4.7e-07 57_[+2]_22 chrVII:115345-115705 7.2e-07 12_[+2]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSKYBYDTGGYBYAGTBGKTW MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSKYBYDTGGYBYAGTBGKTW width=21 seqs=37 chrXII:656839-657193 ( 20) GGGCGTGTGGCGTAGTCGGTA 1 chrVII:773977-774714 ( 54) GGGCGTGTGGCGTAGTCGGTA 1 chrIX:183316-183680 ( 45) GGTCTCTTGGCCCAGTTGGTT 1 chrXII:734629-734930 ( 73) GGTCTCTTGGCCCAGTTGGTT 1 chrII:197134-197796 ( 79) GGTCTCTTGGCCCAGTTGGTT 1 chrVII:823352-823705 ( 4) GGTTTCGTGGTCTAGTCGGTT 1 chrXV:663513-664257 ( 30) GGTTTCGTGGTCTAGTCGGTT 1 chrXI:307926-308453 ( 58) GGTTTCGTGGTCTAGTCGGTT 1 chrX:378238-378338 ( 27) GGTTTCGTGGTCTAGTCGGTT 1 chrXIII:586389-587013 ( 38) GGTTTCGTGGTCTAGTCGGTT 1 chrV:249809-250861 ( 1) GGTCCTATAGTGTAGTGGTTA 1 chrXIII:807992-808550 ( 76) GGTCCTATAGTGTAGTGGTTA 1 chrIV:520737-521157 ( 75) GGTCCTATAGTGTAGTGGTTA 1 chrIV:802568-802979 ( 59) GGTCCTATAGTGTAGTGGTTA 1 chrI:139029-139367 ( 4) GGGCGTGTGGTCTAGTGGTAT 1 chrVI:101045-101727 ( 40) GGGCGTGTGGTCTAGTGGTAT 1 chrXV:353880-354289 ( 59) GCTTCTATGGCCAAGTTGGTA 1 chrXV:110847-111179 ( 50) GGGCGGTTAGTGTAGTGGTTA 1 chrII:350556-351046 ( 76) GGTTTTATAGTGTAGTGGTTA 1 chrXVI:775664-776022 ( 23) GCTCGTATGGCGCAGTGGTAG 1 chrII:642856-643220 ( 70) GCTCGTATGGCGCAGTGGTAG 1 chrV:435632-436005 ( 36) GCCTTGTTGGCGCAATCGGTA 1 chrIII:151132-151498 ( 71) GCCTTGTTGGCGCAATCGGTA 1 chrIV:1351977-1353063 ( 48) GCCTTGTTGGCGCAATCGGTA 1 chrXV:281984-282405 ( 20) GCGCAAGTGGTTTAGTGGTAA 1 chrX:396578-396678 ( 78) GCGCAAGTGGTTTAGTGGTAA 1 chrXII:47296-48647 ( 64) GCTGCTTTGGCTAAGTTGGTT 1 chrVI:162061-162367 ( 64) GCGCAAGTGGTTTAGTGGTAA 1 chrIII:127552-127860 ( 60) GACTCCATGGCCAAGTTGGTT 1 chrXI:74439-74804 ( 53) GACTCCATGGCCAAGTTGGTT 1 chrVII:730979-731386 ( 5) GACTCCATGGCCAAGTTGGTT 1 chrXVI:744081-744582 ( 3) GCCTCCTTAGCTTAGTGGTAG 1 chrXII:818565-818729 ( 12) GCTCCTCTAGTGCAATGGTTA 1 chrIV:1256890-1257283 ( 23) GCGAAAGTGGTTCAGTGGTTA 1 chrXIV:374672-375083 ( 42) GCGGACTTAGCTCAGTTGGGA 1 chrII:36264-36516 ( 58) GCGGATTTAGCTCAGTTGGGA 1 chrVII:115345-115705 ( 13) TCCTTGTTAGCTCAGTTGGTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSKYBYDTGGYBYAGTBGKTW MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 10.5054 E= 1.2e-065 -1185 -1185 234 -351 -192 117 134 -1185 -1185 17 63 66 -351 134 -124 40 -92 63 -2 19 -151 87 -51 40 -5 -283 87 7 -1185 -1185 -1185 170 -5 -1185 187 -1185 -1185 -1185 238 -1185 -1185 142 -1185 66 -1185 98 98 -34 -119 87 -1185 74 170 -1185 -1185 -1185 -151 -1185 221 -1185 -1185 -1185 -1185 170 -1185 49 117 -5 -1185 -1185 238 -1185 -1185 -1185 156 49 -51 -1185 -183 124 81 -1185 -124 30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSKYBYDTGGYBYAGTBGKTW MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 37 E= 1.2e-065 0.000000 0.000000 0.972973 0.027027 0.081081 0.432432 0.486486 0.000000 0.000000 0.216216 0.297297 0.486486 0.027027 0.486486 0.081081 0.405405 0.162162 0.297297 0.189189 0.351351 0.108108 0.351351 0.135135 0.405405 0.297297 0.027027 0.351351 0.324324 0.000000 0.000000 0.000000 1.000000 0.297297 0.000000 0.702703 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.513514 0.000000 0.486486 0.000000 0.378378 0.378378 0.243243 0.135135 0.351351 0.000000 0.513514 1.000000 0.000000 0.000000 0.000000 0.108108 0.000000 0.891892 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.270270 0.432432 0.297297 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.567568 0.432432 0.216216 0.000000 0.054054 0.729730 0.540541 0.000000 0.081081 0.378378 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSKYBYDTGGYBYAGTBGKTW MEME-2 regular expression -------------------------------------------------------------------------------- G[GC][TGC][CT][TC][TC][GTA]T[GA]G[CT][CGT][TC]AGT[GTC]G[GT][TA][AT] -------------------------------------------------------------------------------- Time 677.85 secs. ******************************************************************************** ******************************************************************************** MOTIF AAWRAAAAAAAAAAK MEME-3 width = 15 sites = 98 llr = 968 E-value = 8.4e-042 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAWRAAAAAAAAAAK MEME-3 Description -------------------------------------------------------------------------------- Simplified A 786588897997a8: pos.-specific C ::::1:::::::::: probability G 1115121131:1:24 matrix T 213:1:1:::12:16 bits 2.4 2.1 1.9 1.7 * Relative 1.4 * Entropy 1.2 * * ** * (14.3 bits) 1.0 * * **** *** 0.7 ** ******** *** 0.5 *************** 0.2 *************** 0.0 --------------- Multilevel AAAAAAAAAAAAAAT consensus TG G G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWRAAAAAAAAAAK MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrXII:875251-876139 - 54 2.15e-08 AATAATATCC AAAGAAAAAAAAAAT CGCATTTAGC chrIX:248499-249342 - 72 5.61e-08 TAAGCGATAA AAAAAAAAAAAAAAT AAAAAAATAA chrVIII:475229-475896 + 39 5.61e-08 CGCATCACCA AAAAAAAAAAAAAAT GATACAAAGA chrII:478946-479537 + 82 5.61e-08 TACTTGAAAC AAAAAAAAAAAAAAT GGAA chrXIII:362954-363289 + 80 6.96e-08 TTTTTTTTTC AAAGAAAAGAAAAAG GGAAGG chrXVI:98658-99133 + 14 1.58e-07 GGCGTTCTAG AAAAAAAAGAAAAAT TCAAAAATTT chrXVI:39614-40576 + 79 3.14e-07 TTACCTAAGA TAAGAAAAAAAAAAG CAATTCA chrIV:644795-645349 + 81 3.14e-07 ACATTCTCTG AAAAAAAAAAAAAGT AACTG chrX:538485-538585 - 7 5.32e-07 AGAGAAACGA AAAAAAAAAAATAAT CAACGT chrXII:704210-704635 - 67 5.32e-07 GAAAAAAAAA AATGAAAAAAAAAGT GTAACTTTGC chrV:225504-225700 + 3 6.16e-07 AA AAAGAAAGAAAAAAG CCGGCGGTCG chrII:642856-643220 + 6 7.18e-07 ATTGC AAAAAAAAAAAGAAG CTCGCACTCA chrXVI:188127-189317 + 34 7.18e-07 ATCCCATCAA AAAAAATAAAAAAAG AAAACCCTTG chrVII:857049-857579 + 37 8.52e-07 TGCTCGTTCT AATGGAAAAAAAAAG AAATAAAGGT chrIV:974257-975095 - 51 9.74e-07 TAGAGCAACT AATAAAAAAAATAAG ATCCCTGGAG chrX:415719-415819 + 1 9.74e-07 . AAAAAATAAAAAAAT AAATTGAAAC chrIX:210679-211028 - 7 9.74e-07 AGAGCAGTAC AAAGCAAAAAAAAAG TACATT chrVII:255187-255737 - 62 1.10e-06 CATCGCTGAG AAAGGAAAGAAAAAT GGCATGATAT chrXV:978603-979494 - 45 1.27e-06 CTATTATGCC AAAGCAAAAAAAAAT CGGTGAAATA chrII:301102-301688 - 6 1.27e-06 ACAAATATCC AAAAAAAAGAATAAT TTTAA chrXIII:510954-512299 - 8 1.45e-06 CAATAAGCAG AAGGAAAAAAAAAGG CTTTTAG chrXIII:168687-169040 - 72 1.87e-06 GCCTGGAGAA AAAGGGAAAAAAAAT ATCTCCCGGG chrXIV:568071-568566 + 44 1.87e-06 AATGCTGGAG ATAAAAAAAAAAAAT GCATTAATAC chrXIII:651442-653018 - 58 2.15e-06 AAAACCAAAA AAAGGAAAAGAAAAG ATTTTTTAAA chrXVI:282070-283287 - 22 2.15e-06 TGACGTACAC TAAAAAAAAAAAAGG AATAAAATCC chrXIV:569698-570049 + 27 2.15e-06 TCACATTGCC AATGCAAAAAAAAAG AATGGTCTCT chrVI:30164-32424 + 41 2.15e-06 AACGTTTCGG AGAAAAAAAAATAAG GTGTCAAATT chrVII:968207-969437 + 3 2.15e-06 AA ATTGAAAAAAAAAAG AGCAAGCAAC chrX:531609-531709 - 44 2.15e-06 CTTATTTTCC AGAAAAAAAGAAAAG AAACTGCGCA chrVII:609280-610106 + 77 2.37e-06 ACAGACCGAG GGAGAAAAAAAAAAG GAACTAAAA chrVI:210321-210878 + 31 2.77e-06 CAGGTGTATT AATGAAAAAATAAAG CCAAAAAAAT chrXVI:590905-591392 + 29 2.77e-06 TGCCCTCCAA AAAGAAGAAAAAAGT TGGACCAAGA chrX:120299-120399 + 58 3.48e-06 ATTGATTAGA AAGGAAAAAAAGAAG TGTCCTTTTC chrXI:551906-552794 - 5 3.48e-06 AAAAGTTGGT AATGAAGAGAAAAAT CGTC chrV:249809-250861 - 70 3.97e-06 ATTATGTAAA AATGAATAAAAAAGG TCCTACCCGG chrIV:218289-218867 + 42 3.97e-06 AATTTGAAAT TATGAAAAAAAAAGT GTAGTAGAAC chrXV:438492-439032 - 62 3.97e-06 AGTGGGGAAA AAAGAAAAGAAGAGG ATGGTACCCG chrXII:722671-723094 - 2 3.97e-06 TCAGCGTTTT AATGAAAAAAAAATG C chrXIV:229437-230762 + 25 4.44e-06 TTAAGAAAGA AATAAATAGAAAAAT GTTCCATTTA chrII:380944-381264 - 82 4.44e-06 AAAA AATGAAAAAACAAAG TGAGGTTGGA chrXV:710143-710519 + 76 5.55e-06 AAATGTTATT TATAAAAAAAAAAGT TTTGGAGAAA chrXII:1051917-1052194 + 52 5.55e-06 ATTTACTTAA AGTAAAAAAAATAAT GGTCTCTAGC chrIV:76877-77540 - 80 6.18e-06 TTAGAC AAAAAGAAAATAAAG GGAAAAACAT chrIV:472642-473455 - 6 6.18e-06 TTTCGACTTT AAAGAAAACAAAAAG GTTTG chrV:550869-551516 - 73 6.88e-06 CGTTCTGCTT AAAAAAATAAAAAAT GATGTCTTCA chrXIII:321024-321300 + 21 6.88e-06 TTAGTTAGCC AAAAAAATAAAAAAT GGACGAGTCC chrXIV:350890-353090 - 30 7.65e-06 TGATGAAACT GAAAAATAAAAAAAT AAACAGTCTG chrIX:96789-97723 + 75 1.04e-05 AAACTTAAAC TGAAAAAAAAAAAGT GAAGGAGTAC chrVIII:62635-63080 - 34 1.04e-05 ATACTAGTCC AAAAAAAAAAACAAT TTCAAAAAAA chrV:492202-492550 + 10 1.16e-05 AAAGTTGAT TAAAAGAAAAATAAT CCTTCCCCGC chrX:414596-414696 + 21 1.16e-05 GATCGATGGC ATTGAAAAAAATAAT TTTTCAGGCA chrXVI:700452-700697 - 6 1.41e-05 TCTAATGAGC AAGAAGTAAAAAAAG TTGTA chrXI:109224-110673 + 45 1.41e-05 ACCAAGCTCC AAAGCAAAGAAGAAG AACTTACAGA chrVII:323423-325126 - 4 1.54e-05 TTGAATGTGG GAAGAAAAGGAAAGG AAA chrXIII:131594-132060 + 33 1.54e-05 CATATTCAAA AAAGAAGAAACAAAG CACTCACGAT chrXV:1027745-1029445 - 79 1.54e-05 ATATATT ATTGAGAAGAAAAAT GTCTGACGTT chrIV:1361874-1362669 + 32 1.54e-05 TGGCGAGGGT AAAGAAGAAGATAAT ACGAATTATA chrVIII:455603-456677 + 22 1.69e-05 TTTATGTGGA AAAAAAAGGAAGAAT ATGTTGTAAA chrV:260281-261306 + 67 1.69e-05 ATGAATGAGT AGAAAAAAGATAAAT TAGAAAACAG chrXII:780440-781807 - 60 1.69e-05 GTTAACAGAT TATAAGAAAAATAAG GAATGATCGG chrXI:490743-491352 - 45 1.69e-05 AAGAAAATTA TAAAAGTAAAAAAAT TCTTCCCCGC chrXVI:810597-811258 + 36 1.69e-05 CAGAAATAAA TAAATAAAAAAAAAT CTAGTATCGC chrIII:107059-107829 + 61 1.69e-05 GTTTCCTGAG TATAAGAAAAATAAG CAAAATAAGT chrVI:226429-226907 + 57 1.86e-05 TTTGTTAGAG AAAAAAAGAGATAAG CCCTGTAGGG chrXV:729091-730351 + 32 1.86e-05 ATAAATGTGT AAAATAAAGAAAAGT CTTTTTTAAA chrXIII:759731-763205 + 30 2.04e-05 TAAGATCATT GATAGAAAGAAAAAT TTGGTTAAGA chrXIII:159266-160347 - 75 2.43e-05 TATGTATATA AAGGGAAAGGAAAAT GCACGGGAGA chrX:139158-139258 + 42 2.43e-05 GATAATCTCA TGAGAAAAAATAAAG GCTCAGATCT chrVII:422908-423538 - 32 2.66e-05 ATCATTTTAA ATGGAAAAAAATAAT GGTTGCTAAG chrVII:773977-774714 - 17 2.89e-05 AAAGGGGAGA ATAGAGAAGAATAAT GAAGTAAATC chrI:181154-181455 - 3 2.89e-05 AAGTATAGGA GGAAAAAGAAAAAAT AA chrXVI:404480-408221 - 44 3.14e-05 AACTTCATAA AATGGGTAGAAAAAG CATCGTTGCT chrXI:146788-147743 - 36 3.14e-05 GATGGGTGTG AAGAAAAAGACAAAT TTGGGTTGAA chrIV:129381-130859 + 14 3.14e-05 GGCGTATGTT AATAAGATAAAAAAT AATTAAAGGA chrIV:1344681-1346068 + 1 3.43e-05 . AATAAAAAGAAAAAA TTGAAAAAGA chrXI:21314-21905 - 50 3.43e-05 CTCTAACCCC AGGAAAAGGAAAAAG AGAAACACGC chrXVI:750748-751492 - 43 3.43e-05 CGCTAATAGT GATGAAAAAGAGAAT GAAAAGAGGA chrXV:679574-680888 + 74 3.72e-05 CAACAGGCTG AAAATGAAGAAAAGG CCAAGATATT chrV:51789-53279 - 52 3.72e-05 GGATAACCAC AATGAAGAGGATAAG TGACACATTA chrXV:832257-832847 - 59 4.04e-05 AAGTTCTCCT TAAGAATAAAATAGT AAAGGAAGCT chrXV:796657-798760 + 5 4.73e-05 CAAC CAAAAATAAAAAAAT GCTTCAATCC chrIV:416573-417143 + 52 4.73e-05 TTCCACGCCA AGAAGAAAAAAGAGT TTCGGGTTTA chrXII:87853-88540 - 53 4.73e-05 TAAATAAGTA AATGAATAAATAAGT GAATAGGTAG chrIV:357246-358242 + 6 4.73e-05 TCTTG AAAATGTAAAAAAAT GGAGCCTCGC chrXIII:554761-556780 + 35 5.54e-05 ATTTCCTTCA AAAAAGAAGAATATT CATAAACTCC chrXI:364398-365271 + 54 5.54e-05 ATTCGTTTTT AATGAAAGGGAGAAG ATTTTTTTGT chrIV:433978-435124 - 63 5.97e-05 ATAAAAGGAA AGAAGATAAAATAAT AACATTATGT chrXV:520097-520958 - 13 5.97e-05 AAGCGAAAAT TGAAAAAAGATAAAT ACTTCCGAGC chrIII:161908-163326 + 57 5.97e-05 AATAATAGTG ATAAAAGGAAAAAAG CTAACAATTT chrXII:498814-500171 - 36 6.43e-05 TTTTGTTGTA AATAGAAAAGTAAAT AATGACAATA chrXVI:574924-576832 + 66 6.43e-05 ACACTAGTCG AGTGAAAGAGATAAG ATACCCACTT chrXIV:715611-717064 - 60 6.43e-05 GTACATAATT AAAATAGAAGAAAAT TTTCAAAAAA chrX:396578-396678 + 15 6.92e-05 AGAGAAGAAA TATAAAAAAGAAATG CGCAAGCCCG chrV:266172-268260 + 33 7.45e-05 GACCAGCAAC TAGGGAGAAAAAAAT CTTGTACTTG chrVII:254159-254719 - 5 7.45e-05 GGCATTATTG TGTGCGAAAAAAAAG TTTC chrII:88927-89465 - 46 7.45e-05 CATATTTCAA GATAAGAAAAAAATT CCGCAACTTT chrXIV:495298-495791 + 25 8.60e-05 AACGCATGAG GAAGAGTAAAATAGG GAATGCACGG chrXV:867026-868153 - 29 8.60e-05 CACCTTCTGT ATAAAAAAAGAAATT ATCATAGGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWRAAAAAAAAAAK MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:875251-876139 2.2e-08 53_[-3]_32 chrIX:248499-249342 5.6e-08 71_[-3]_14 chrVIII:475229-475896 5.6e-08 38_[+3]_47 chrII:478946-479537 5.6e-08 81_[+3]_4 chrXIII:362954-363289 7e-08 79_[+3]_6 chrXVI:98658-99133 1.6e-07 13_[+3]_72 chrXVI:39614-40576 3.1e-07 78_[+3]_7 chrIV:644795-645349 3.1e-07 80_[+3]_5 chrX:538485-538585 5.3e-07 6_[-3]_79 chrXII:704210-704635 5.3e-07 66_[-3]_19 chrV:225504-225700 6.2e-07 2_[+3]_83 chrII:642856-643220 7.2e-07 5_[+3]_80 chrXVI:188127-189317 7.2e-07 33_[+3]_52 chrVII:857049-857579 8.5e-07 36_[+3]_49 chrIV:974257-975095 9.7e-07 50_[-3]_35 chrX:415719-415819 9.7e-07 [+3]_85 chrIX:210679-211028 9.7e-07 6_[-3]_79 chrVII:255187-255737 1.1e-06 61_[-3]_24 chrXV:978603-979494 1.3e-06 44_[-3]_41 chrII:301102-301688 1.3e-06 5_[-3]_80 chrXIII:510954-512299 1.4e-06 7_[-3]_78 chrXIII:168687-169040 1.9e-06 71_[-3]_14 chrXIV:568071-568566 1.9e-06 43_[+3]_42 chrXIII:651442-653018 2.2e-06 57_[-3]_28 chrXVI:282070-283287 2.2e-06 21_[-3]_64 chrXIV:569698-570049 2.2e-06 26_[+3]_59 chrVI:30164-32424 2.2e-06 40_[+3]_45 chrVII:968207-969437 2.2e-06 2_[+3]_83 chrX:531609-531709 2.2e-06 43_[-3]_42 chrVII:609280-610106 2.4e-06 76_[+3]_9 chrVI:210321-210878 2.8e-06 30_[+3]_55 chrXVI:590905-591392 2.8e-06 28_[+3]_57 chrX:120299-120399 3.5e-06 57_[+3]_28 chrXI:551906-552794 3.5e-06 4_[-3]_81 chrV:249809-250861 4e-06 69_[-3]_16 chrIV:218289-218867 4e-06 41_[+3]_44 chrXV:438492-439032 4e-06 61_[-3]_24 chrXII:722671-723094 4e-06 1_[-3]_84 chrXIV:229437-230762 4.4e-06 24_[+3]_61 chrII:380944-381264 4.4e-06 81_[-3]_4 chrXV:710143-710519 5.5e-06 75_[+3]_10 chrXII:1051917-1052194 5.5e-06 51_[+3]_34 chrIV:76877-77540 6.2e-06 79_[-3]_6 chrIV:472642-473455 6.2e-06 5_[-3]_80 chrV:550869-551516 6.9e-06 72_[-3]_13 chrXIII:321024-321300 6.9e-06 20_[+3]_65 chrXIV:350890-353090 7.7e-06 29_[-3]_56 chrIX:96789-97723 1e-05 74_[+3]_11 chrVIII:62635-63080 1e-05 33_[-3]_52 chrV:492202-492550 1.2e-05 9_[+3]_76 chrX:414596-414696 1.2e-05 20_[+3]_65 chrXVI:700452-700697 1.4e-05 5_[-3]_80 chrXI:109224-110673 1.4e-05 44_[+3]_41 chrVII:323423-325126 1.5e-05 3_[-3]_82 chrXIII:131594-132060 1.5e-05 32_[+3]_53 chrXV:1027745-1029445 1.5e-05 78_[-3]_7 chrIV:1361874-1362669 1.5e-05 31_[+3]_54 chrVIII:455603-456677 1.7e-05 21_[+3]_64 chrV:260281-261306 1.7e-05 66_[+3]_19 chrXII:780440-781807 1.7e-05 59_[-3]_26 chrXI:490743-491352 1.7e-05 44_[-3]_41 chrXVI:810597-811258 1.7e-05 35_[+3]_50 chrIII:107059-107829 1.7e-05 60_[+3]_25 chrVI:226429-226907 1.9e-05 56_[+3]_29 chrXV:729091-730351 1.9e-05 31_[+3]_54 chrXIII:759731-763205 2e-05 29_[+3]_56 chrXIII:159266-160347 2.4e-05 74_[-3]_11 chrX:139158-139258 2.4e-05 41_[+3]_44 chrVII:422908-423538 2.7e-05 31_[-3]_54 chrVII:773977-774714 2.9e-05 16_[-3]_69 chrI:181154-181455 2.9e-05 2_[-3]_83 chrXVI:404480-408221 3.1e-05 43_[-3]_42 chrXI:146788-147743 3.1e-05 35_[-3]_50 chrIV:129381-130859 3.1e-05 13_[+3]_72 chrIV:1344681-1346068 3.4e-05 [+3]_85 chrXI:21314-21905 3.4e-05 49_[-3]_36 chrXVI:750748-751492 3.4e-05 42_[-3]_43 chrXV:679574-680888 3.7e-05 73_[+3]_12 chrV:51789-53279 3.7e-05 51_[-3]_34 chrXV:832257-832847 4e-05 58_[-3]_27 chrXV:796657-798760 4.7e-05 4_[+3]_81 chrIV:416573-417143 4.7e-05 51_[+3]_34 chrXII:87853-88540 4.7e-05 52_[-3]_33 chrIV:357246-358242 4.7e-05 5_[+3]_80 chrXIII:554761-556780 5.5e-05 34_[+3]_51 chrXI:364398-365271 5.5e-05 53_[+3]_32 chrIV:433978-435124 6e-05 62_[-3]_23 chrXV:520097-520958 6e-05 12_[-3]_73 chrIII:161908-163326 6e-05 56_[+3]_29 chrXII:498814-500171 6.4e-05 35_[-3]_50 chrXVI:574924-576832 6.4e-05 65_[+3]_20 chrXIV:715611-717064 6.4e-05 59_[-3]_26 chrX:396578-396678 6.9e-05 14_[+3]_71 chrV:266172-268260 7.5e-05 32_[+3]_53 chrVII:254159-254719 7.5e-05 4_[-3]_81 chrII:88927-89465 7.5e-05 45_[-3]_40 chrXIV:495298-495791 8.6e-05 24_[+3]_61 chrXV:867026-868153 8.6e-05 28_[-3]_57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWRAAAAAAAAAAK MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAWRAAAAAAAAAAK width=15 seqs=98 chrXII:875251-876139 ( 54) AAAGAAAAAAAAAAT 1 chrIX:248499-249342 ( 72) AAAAAAAAAAAAAAT 1 chrVIII:475229-475896 ( 39) AAAAAAAAAAAAAAT 1 chrII:478946-479537 ( 82) AAAAAAAAAAAAAAT 1 chrXIII:362954-363289 ( 80) AAAGAAAAGAAAAAG 1 chrXVI:98658-99133 ( 14) AAAAAAAAGAAAAAT 1 chrXVI:39614-40576 ( 79) TAAGAAAAAAAAAAG 1 chrIV:644795-645349 ( 81) AAAAAAAAAAAAAGT 1 chrX:538485-538585 ( 7) AAAAAAAAAAATAAT 1 chrXII:704210-704635 ( 67) AATGAAAAAAAAAGT 1 chrV:225504-225700 ( 3) AAAGAAAGAAAAAAG 1 chrII:642856-643220 ( 6) AAAAAAAAAAAGAAG 1 chrXVI:188127-189317 ( 34) AAAAAATAAAAAAAG 1 chrVII:857049-857579 ( 37) AATGGAAAAAAAAAG 1 chrIV:974257-975095 ( 51) AATAAAAAAAATAAG 1 chrX:415719-415819 ( 1) AAAAAATAAAAAAAT 1 chrIX:210679-211028 ( 7) AAAGCAAAAAAAAAG 1 chrVII:255187-255737 ( 62) AAAGGAAAGAAAAAT 1 chrXV:978603-979494 ( 45) AAAGCAAAAAAAAAT 1 chrII:301102-301688 ( 6) AAAAAAAAGAATAAT 1 chrXIII:510954-512299 ( 8) AAGGAAAAAAAAAGG 1 chrXIII:168687-169040 ( 72) AAAGGGAAAAAAAAT 1 chrXIV:568071-568566 ( 44) ATAAAAAAAAAAAAT 1 chrXIII:651442-653018 ( 58) AAAGGAAAAGAAAAG 1 chrXVI:282070-283287 ( 22) TAAAAAAAAAAAAGG 1 chrXIV:569698-570049 ( 27) AATGCAAAAAAAAAG 1 chrVI:30164-32424 ( 41) AGAAAAAAAAATAAG 1 chrVII:968207-969437 ( 3) ATTGAAAAAAAAAAG 1 chrX:531609-531709 ( 44) AGAAAAAAAGAAAAG 1 chrVII:609280-610106 ( 77) GGAGAAAAAAAAAAG 1 chrVI:210321-210878 ( 31) AATGAAAAAATAAAG 1 chrXVI:590905-591392 ( 29) AAAGAAGAAAAAAGT 1 chrX:120299-120399 ( 58) AAGGAAAAAAAGAAG 1 chrXI:551906-552794 ( 5) AATGAAGAGAAAAAT 1 chrV:249809-250861 ( 70) AATGAATAAAAAAGG 1 chrIV:218289-218867 ( 42) TATGAAAAAAAAAGT 1 chrXV:438492-439032 ( 62) AAAGAAAAGAAGAGG 1 chrXII:722671-723094 ( 2) AATGAAAAAAAAATG 1 chrXIV:229437-230762 ( 25) AATAAATAGAAAAAT 1 chrII:380944-381264 ( 82) AATGAAAAAACAAAG 1 chrXV:710143-710519 ( 76) TATAAAAAAAAAAGT 1 chrXII:1051917-1052194 ( 52) AGTAAAAAAAATAAT 1 chrIV:76877-77540 ( 80) AAAAAGAAAATAAAG 1 chrIV:472642-473455 ( 6) AAAGAAAACAAAAAG 1 chrV:550869-551516 ( 73) AAAAAAATAAAAAAT 1 chrXIII:321024-321300 ( 21) AAAAAAATAAAAAAT 1 chrXIV:350890-353090 ( 30) GAAAAATAAAAAAAT 1 chrIX:96789-97723 ( 75) TGAAAAAAAAAAAGT 1 chrVIII:62635-63080 ( 34) AAAAAAAAAAACAAT 1 chrV:492202-492550 ( 10) TAAAAGAAAAATAAT 1 chrX:414596-414696 ( 21) ATTGAAAAAAATAAT 1 chrXVI:700452-700697 ( 6) AAGAAGTAAAAAAAG 1 chrXI:109224-110673 ( 45) AAAGCAAAGAAGAAG 1 chrVII:323423-325126 ( 4) GAAGAAAAGGAAAGG 1 chrXIII:131594-132060 ( 33) AAAGAAGAAACAAAG 1 chrXV:1027745-1029445 ( 79) ATTGAGAAGAAAAAT 1 chrIV:1361874-1362669 ( 32) AAAGAAGAAGATAAT 1 chrVIII:455603-456677 ( 22) AAAAAAAGGAAGAAT 1 chrV:260281-261306 ( 67) AGAAAAAAGATAAAT 1 chrXII:780440-781807 ( 60) TATAAGAAAAATAAG 1 chrXI:490743-491352 ( 45) TAAAAGTAAAAAAAT 1 chrXVI:810597-811258 ( 36) TAAATAAAAAAAAAT 1 chrIII:107059-107829 ( 61) TATAAGAAAAATAAG 1 chrVI:226429-226907 ( 57) AAAAAAAGAGATAAG 1 chrXV:729091-730351 ( 32) AAAATAAAGAAAAGT 1 chrXIII:759731-763205 ( 30) GATAGAAAGAAAAAT 1 chrXIII:159266-160347 ( 75) AAGGGAAAGGAAAAT 1 chrX:139158-139258 ( 42) TGAGAAAAAATAAAG 1 chrVII:422908-423538 ( 32) ATGGAAAAAAATAAT 1 chrVII:773977-774714 ( 17) ATAGAGAAGAATAAT 1 chrI:181154-181455 ( 3) GGAAAAAGAAAAAAT 1 chrXVI:404480-408221 ( 44) AATGGGTAGAAAAAG 1 chrXI:146788-147743 ( 36) AAGAAAAAGACAAAT 1 chrIV:129381-130859 ( 14) AATAAGATAAAAAAT 1 chrIV:1344681-1346068 ( 1) AATAAAAAGAAAAAA 1 chrXI:21314-21905 ( 50) AGGAAAAGGAAAAAG 1 chrXVI:750748-751492 ( 43) GATGAAAAAGAGAAT 1 chrXV:679574-680888 ( 74) AAAATGAAGAAAAGG 1 chrV:51789-53279 ( 52) AATGAAGAGGATAAG 1 chrXV:832257-832847 ( 59) TAAGAATAAAATAGT 1 chrXV:796657-798760 ( 5) CAAAAATAAAAAAAT 1 chrIV:416573-417143 ( 52) AGAAGAAAAAAGAGT 1 chrXII:87853-88540 ( 53) AATGAATAAATAAGT 1 chrIV:357246-358242 ( 6) AAAATGTAAAAAAAT 1 chrXIII:554761-556780 ( 35) AAAAAGAAGAATATT 1 chrXI:364398-365271 ( 54) AATGAAAGGGAGAAG 1 chrIV:433978-435124 ( 63) AGAAGATAAAATAAT 1 chrXV:520097-520958 ( 13) TGAAAAAAGATAAAT 1 chrIII:161908-163326 ( 57) ATAAAAGGAAAAAAG 1 chrXII:498814-500171 ( 36) AATAGAAAAGTAAAT 1 chrXVI:574924-576832 ( 66) AGTGAAAGAGATAAG 1 chrXIV:715611-717064 ( 60) AAAATAGAAGAAAAT 1 chrX:396578-396678 ( 15) TATAAAAAAGAAATG 1 chrV:266172-268260 ( 33) TAGGGAGAAAAAAAT 1 chrVII:254159-254719 ( 5) TGTGCGAAAAAAAAG 1 chrII:88927-89465 ( 46) GATAAGAAAAAAATT 1 chrXIV:495298-495791 ( 25) GAAGAGTAAAATAGG 1 chrXV:867026-868153 ( 29) ATAAAAAAAGAAATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWRAAAAAAAAAAK MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 51600 bayes= 10.6363 E= 8.4e-042 127 -423 -123 -92 133 -1326 -43 -191 97 -1326 -123 4 81 -1326 126 -1326 135 -191 -78 -259 142 -1326 -15 -1326 133 -1326 -123 -111 153 -1326 -123 -333 125 -423 41 -1326 148 -1326 -43 -1326 154 -265 -1326 -211 121 -423 -123 -67 170 -1326 -1326 -1326 133 -1326 -15 -259 -491 -1326 116 87 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWRAAAAAAAAAAK MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 98 E= 8.4e-042 0.744898 0.010204 0.081633 0.163265 0.775510 0.000000 0.142857 0.081633 0.602041 0.000000 0.081633 0.316327 0.540816 0.000000 0.459184 0.000000 0.785714 0.051020 0.112245 0.051020 0.826531 0.000000 0.173469 0.000000 0.775510 0.000000 0.081633 0.142857 0.887755 0.000000 0.081633 0.030612 0.734694 0.010204 0.255102 0.000000 0.857143 0.000000 0.142857 0.000000 0.897959 0.030612 0.000000 0.071429 0.714286 0.010204 0.081633 0.193878 1.000000 0.000000 0.000000 0.000000 0.775510 0.000000 0.173469 0.051020 0.010204 0.000000 0.428571 0.561224 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAWRAAAAAAAAAAK MEME-3 regular expression -------------------------------------------------------------------------------- AA[AT][AG]AAAA[AG]AAAAA[TG] -------------------------------------------------------------------------------- Time 994.57 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:374689-375843 5.93e-01 100 chrVIII:144163-146443 9.47e-01 100 chrXIV:715611-717064 1.28e-01 59_[-3(6.43e-05)]_26 chrVII:23844-25935 2.33e-01 100 chrXI:261105-262069 8.97e-01 100 chrI:181154-181455 2.32e-02 2_[-3(2.89e-05)]_83 chrIV:1305384-1305677 7.87e-01 100 chrXVI:821625-822299 7.51e-01 100 chrXIII:551480-551704 9.38e-01 100 chrVII:440244-443154 1.42e-01 100 chrVII:345857-346726 7.22e-01 100 chrXI:364398-365271 6.41e-02 53_[+3(5.54e-05)]_32 chrIV:619746-620165 2.75e-06 67_[-1(2.16e-09)]_10 chrIII:107059-107829 6.06e-02 60_[+3(1.69e-05)]_25 chrXVI:338607-339348 8.50e-01 100 chrIV:1012790-1013656 1.78e-01 100 chrXI:578687-579364 1.13e-05 58_[+1(7.65e-09)]_19 chrIX:315975-316480 1.66e-01 100 chrXIV:426526-426759 9.08e-01 100 chrIV:916569-917373 3.72e-01 100 chrXII:426947-427436 1.46e-05 35_[+1(1.44e-09)]_42 chrIX:315634-315794 6.91e-01 100 chrII:301102-301688 6.37e-03 5_[-3(1.27e-06)]_80 chrXI:457986-458981 9.32e-01 100 chrXVI:55873-56411 7.07e-02 57_[+3(9.21e-05)]_28 chrVII:363625-364453 4.21e-01 100 chrXV:594231-594684 6.95e-01 100 chrXII:97076-98255 4.54e-01 100 chrVII:806051-807783 6.91e-01 100 chrXV:722879-724837 1.24e-02 37_[-1(8.39e-06)]_40 chrXIII:146437-147723 1.44e-01 100 chrV:101986-102641 1.93e-01 100 chrXVI:572246-572765 1.06e-02 100 chrII:409771-410740 8.13e-01 100 chrIV:667751-668222 4.11e-07 74_[-1(1.89e-09)]_3 chrXV:505721-507117 7.86e-02 100 chrIV:836998-837782 7.72e-01 100 chrXIII:631567-634779 1.97e-02 30_[-2(9.80e-05)]_49 chrVI:162061-162367 1.67e-04 63_[+2(8.41e-08)]_16 chrXII:722671-723094 9.32e-03 1_[-3(3.97e-06)]_84 chrVIII:134117-134742 4.80e-01 100 chrX:531609-531709 1.14e-09 12_[+1(1.22e-10)]_8_[-3(2.15e-06)]_\ 42 chrVII:255187-255737 2.89e-03 61_[-3(1.10e-06)]_24 chrVIII:383040-383586 2.00e-01 100 chrXII:818565-818729 9.93e-09 11_[+2(2.93e-07)]_24_[+1(5.32e-09)]_\ 21 chrXIII:253327-254019 5.25e-01 100 chrXIV:96013-96436 7.51e-05 70_[-1(1.09e-08)]_7 chrXIV:560113-560906 7.17e-01 100 chrII:9526-9979 2.18e-01 100 chrXVI:750748-751492 5.07e-02 42_[-3(3.43e-05)]_43 chrXII:1051917-1052194 6.97e-08 51_[+3(5.55e-06)]_3_[-1(1.89e-09)]_\ 8 chrIV:1401712-1403421 2.49e-01 100 chrXV:438492-439032 8.47e-03 61_[-3(3.97e-06)]_24 chrXIII:225844-227324 4.60e-02 100 chrVII:855263-856232 8.37e-01 100 chrII:134798-135349 3.31e-01 100 chrX:391799-391899 6.52e-01 100 chrVI:101045-101727 4.32e-06 39_[+2(5.77e-09)]_40 chrXVI:213049-214145 2.97e-02 100 chrV:510408-511598 7.96e-02 100 chrXI:322521-323115 1.33e-01 100 chrXII:797004-797433 1.19e-06 54_[+1(9.38e-10)]_23 chrXII:64309-65847 6.68e-01 100 chrXI:21314-21905 7.17e-04 61_[+1(2.01e-05)]_16 chrV:143394-144139 2.49e-01 100 chrIV:915065-916278 8.10e-01 100 chrI:139029-139367 9.60e-06 3_[+2(5.77e-09)]_76 chrXIII:309707-310093 6.41e-01 100 chrXIII:878880-880914 4.34e-01 100 chrXII:1029089-1030337 7.37e-01 100 chrXII:515240-516912 3.48e-01 100 chrVII:951418-951743 3.21e-01 100 chrXI:109224-110673 1.16e-03 44_[+3(1.41e-05)]_41 chrXI:558501-559464 6.87e-01 100 chrXII:949044-950287 4.35e-01 100 chrXVI:209976-210458 1.59e-07 28_[-1(9.38e-10)]_49 chrV:174464-175202 5.50e-01 100 chrXII:424072-424557 9.45e-01 100 chrIV:992741-993220 7.01e-01 100 chrXII:198356-199761 7.26e-01 100 chrIII:122923-123792 3.78e-01 100 chrXVI:432027-434376 1.89e-01 100 chrV:460526-462151 2.62e-01 100 chrXIV:525078-525268 3.38e-01 100 chrVII:765926-766796 6.88e-01 100 chrXII:370533-372325 7.88e-01 100 chrII:87934-88610 3.55e-01 100 chrXII:823768-826239 7.46e-01 100 chrXV:841516-842971 2.44e-01 100 chrVII:989733-990700 9.65e-01 100 chrVI:105948-106476 6.64e-01 100 chrXI:7779-8289 2.77e-01 100 chrXV:976388-978351 2.04e-01 100 chrIV:129381-130859 9.20e-02 13_[+3(3.14e-05)]_72 chrXV:32895-33805 2.81e-01 100 chrVII:625080-625493 3.95e-01 100 chrXVI:188127-189317 1.11e-04 33_[+3(7.18e-07)]_52 chrXII:522584-523739 1.23e-01 100 chrXVI:810597-811258 1.11e-02 35_[+3(1.69e-05)]_50 chrVIII:375222-377061 1.10e-01 100 chrV:363640-364530 8.40e-01 100 chrXII:47296-48647 1.48e-04 63_[-2(8.41e-08)]_16 chrXVI:581849-582485 4.06e-01 100 chrXII:975780-976162 8.25e-05 65_[-1(9.46e-08)]_12 chrXII:348057-348787 7.66e-01 100 chrXVI:744081-744582 4.36e-07 2_[+2(1.82e-07)]_24_[+1(2.42e-06)]_\ 30 chrVII:970350-974007 4.78e-02 46_[+1(8.77e-05)]_31 chrXVI:879319-880557 1.51e-02 55_[-1(5.32e-05)]_22 chrXII:1002265-1003368 2.18e-01 100 chrXIV:756089-760086 1.55e-01 100 chrXIII:119309-119880 6.72e-01 100 chrII:563214-564670 7.26e-01 100 chrV:362680-363277 1.34e-01 100 chrVI:52871-54422 7.60e-01 100 chrIX:316734-318341 7.34e-01 100 chrXVI:927692-928093 8.74e-01 100 chrXV:407507-408227 1.79e-01 100 chrXII:837619-839413 8.38e-01 100 chrIV:1351977-1353063 7.46e-05 47_[-2(6.63e-08)]_32 chrXV:300886-301596 9.68e-01 100 chrIV:357246-358242 3.28e-02 5_[+3(4.73e-05)]_80 chrXIII:507165-509388 9.27e-01 100 chrVIII:50156-50845 1.33e-01 65_[-2(7.93e-05)]_14 chrIV:519673-520265 1.44e-01 100 chrV:176912-177581 8.81e-02 100 chrVII:405473-405974 6.44e-01 100 chrXV:899876-901196 7.62e-01 100 chrXIII:586389-587013 7.05e-06 37_[-2(6.43e-10)]_42 chrXV:725113-725742 5.00e-01 100 chrX:453325-453425 3.80e-01 100 chrVII:533532-535135 5.65e-01 100 chrX:378238-378338 7.06e-11 26_[+2(6.43e-10)]_26_[+1(9.68e-09)]_\ 4 chrXII:604720-605599 8.86e-01 100 chrXII:201611-202659 6.95e-02 100 chrII:554412-555164 5.01e-01 100 chrXIII:510954-512299 6.18e-03 7_[-3(1.45e-06)]_78 chrXIV:374672-375083 1.36e-03 41_[+2(4.02e-07)]_38 chrII:88927-89465 1.84e-01 45_[-3(7.45e-05)]_40 chrVII:411991-412559 3.29e-06 72_[-1(9.68e-09)]_5 chrXI:381651-382072 5.68e-01 100 chrXI:259137-260016 2.48e-01 100 chrV:66643-69341 3.12e-01 100 chrXI:490743-491352 9.40e-08 16_[+1(2.16e-09)]_5_[-3(1.69e-05)]_\ 41 chrII:380944-381264 1.38e-04 81_[-3(4.44e-06)]_4 chrX:374179-374279 1.92e-06 9_[-2(6.32e-05)]_14_[-1(1.37e-08)]_\ 33 chrIV:644795-645349 2.11e-03 80_[+3(3.14e-07)]_5 chrII:478946-479537 5.58e-04 36_[+3(5.54e-05)]_30_[+3(5.61e-08)]_\ 4 chrX:454245-454345 3.97e-01 100 chrXI:787-1071 8.58e-01 100 chrVII:914743-915251 8.19e-01 100 chrXIII:768189-768405 9.78e-01 100 chrVII:828360-828950 1.30e-01 32_[-2(9.54e-05)]_47 chrXIII:388354-388605 1.06e-01 8_[+1(4.18e-05)]_69 chrXII:953894-954084 6.35e-01 100 chrVIII:48277-48612 4.91e-01 100 chrV:51789-53279 1.03e-01 51_[-3(3.72e-05)]_34 chrVII:422908-423538 5.14e-03 31_[-3(2.66e-05)]_54 chrVIII:475229-475896 1.14e-04 38_[+3(5.61e-08)]_47 chrXVI:303080-304474 4.51e-01 100 chrXII:399935-400411 3.86e-01 100 chrVII:919786-920040 7.85e-01 100 chrII:603686-605916 8.93e-01 100 chrIV:542656-543561 5.96e-01 100 chrVI:191263-191767 1.55e-04 51_[-1(2.09e-07)]_26 chrIV:1236451-1238841 7.92e-01 100 chrIV:472642-473455 2.52e-02 5_[-3(6.18e-06)]_80 chrXII:898077-899774 6.90e-01 100 chrVII:968207-969437 3.02e-03 2_[+3(2.15e-06)]_83 chrX:414596-414696 1.86e-02 20_[+3(1.16e-05)]_10_[-3(7.65e-06)]_\ 40 chrXIV:738589-740389 4.67e-01 100 chrX:73553-73653 6.66e-01 100 chrXIV:776575-777415 5.28e-03 24_[+1(1.36e-06)]_53 chrI:141184-143702 3.07e-01 100 chrIII:137621-139403 2.73e-01 100 chrVII:958680-959653 4.50e-01 100 chrII:162887-163926 8.85e-01 100 chrX:354044-354144 1.35e-01 48_[+2(9.54e-05)]_31 chrXIV:350890-353090 1.33e-02 29_[-3(7.65e-06)]_56 chrX:227688-227788 3.79e-01 100 chrV:311698-312261 3.83e-01 100 chrXII:805788-807180 5.30e-01 100 chrXVI:822598-824295 7.14e-01 100 chrV:166804-167609 9.18e-01 100 chrIV:1361874-1362669 1.02e-02 31_[+3(1.54e-05)]_54 chrXVI:819134-821170 1.68e-02 100 chrXV:464107-465409 4.41e-01 100 chrX:647396-647496 5.33e-01 100 chrXIV:725680-726358 9.99e-01 100 chrX:223696-223796 2.08e-01 100 chrXII:506205-507540 2.01e-01 100 chrXII:374221-374691 8.39e-01 100 chrVII:730979-731386 6.60e-08 4_[+2(1.05e-07)]_26_[+1(9.46e-08)]_\ 26 chrXII:721744-722359 8.38e-01 100 chrIV:1075326-1075726 3.70e-02 2_[+1(9.10e-05)]_75 chrXV:1027745-1029445 3.10e-02 78_[-3(1.54e-05)]_7 chrVII:876195-879011 7.06e-01 100 chrXIV:576673-577584 4.77e-01 100 chrII:624800-625449 2.73e-01 100 chrIX:174912-175568 3.93e-01 100 chrX:172742-172842 3.61e-01 100 chrXIV:631506-632135 1.14e-01 100 chrII:392127-392298 2.33e-01 100 chrXII:1017586-1018931 4.54e-02 100 chrXIV:392272-392911 9.26e-01 100 chrVII:316816-317419 8.83e-01 100 chrXI:431850-433460 3.19e-01 100 chrV:225504-225700 6.45e-04 2_[+3(6.16e-07)]_22_[+3(7.45e-05)]_\ 46 chrIV:1461453-1462001 1.33e-01 100 chrVII:149224-149568 4.11e-01 100 chrXIV:416398-417302 5.90e-01 100 chrIV:76877-77540 2.71e-02 79_[-3(6.18e-06)]_6 chrXII:784034-784449 5.92e-01 100 chrIV:218289-218867 4.83e-03 41_[+3(3.97e-06)]_44 chrII:165082-165844 2.69e-01 100 chrXV:92717-94489 5.91e-01 100 chrXII:796551-796777 5.96e-01 100 chrXII:780440-781807 8.39e-03 59_[-3(1.69e-05)]_26 chrXVI:214626-215932 4.00e-01 100 chrXI:382715-384743 9.86e-01 100 chrXV:92032-92437 2.48e-01 100 chrXIII:434060-434332 5.91e-01 100 chrX:540957-541057 6.66e-01 100 chrIV:437578-438093 1.41e-03 41_[+1(4.66e-07)]_36 chrXV:903256-904693 6.08e-01 100 chrX:18824-18924 5.44e-01 100 chrXIII:556985-558426 1.20e-01 100 chrV:305872-306067 8.23e-01 100 chrXII:628209-628896 2.15e-01 100 chrV:492202-492550 5.04e-09 9_[+3(1.16e-05)]_5_[-1(2.16e-09)]_\ 48 chrXII:819251-820438 3.88e-01 100 chrVII:110319-110767 9.15e-01 100 chrXV:729091-730351 3.35e-02 31_[+3(1.86e-05)]_54 chrVII:254159-254719 4.04e-02 4_[-3(7.45e-05)]_81 chrII:266221-266703 9.92e-05 11_[+1(9.46e-08)]_66 chrXII:36400-38013 9.84e-01 100 chrV:288113-288723 8.48e-01 100 chrXIII:131594-132060 8.07e-07 32_[+3(1.54e-05)]_4_[-1(1.37e-08)]_\ 26 chrII:392922-395327 9.20e-01 100 chrXIII:300857-302441 9.82e-01 100 chrXIII:759731-763205 3.90e-02 29_[+3(2.04e-05)]_56 chrXI:163251-164510 9.52e-01 100 chrXI:307926-308453 7.04e-11 8_[-1(9.68e-09)]_26_[-2(6.43e-10)]_\ 22 chrX:139158-139258 6.03e-02 41_[+3(2.43e-05)]_44 chrV:431043-431898 3.24e-01 100 chrXV:259343-259973 1.94e-01 100 chrV:469271-469910 4.99e-01 100 chrXVI:701843-702356 6.37e-01 100 chrVII:845479-846320 2.48e-01 100 chrXV:353880-354289 6.59e-09 10_[-1(9.46e-08)]_25_[-2(8.61e-09)]_\ 21 chrX:355195-355295 1.92e-06 3_[+1(1.37e-08)]_14_[+2(6.32e-05)]_\ 39 chrX:703363-703463 6.03e-01 100 chrIX:25027-25298 3.51e-01 100 chrXII:253716-255352 8.92e-01 100 chrXII:809739-815777 4.77e-02 100 chrII:197134-197796 1.38e-06 78_[+2(2.63e-10)]_1 chrIV:305422-307840 2.48e-01 100 chrXVI:678566-680815 5.91e-01 100 chrIII:227786-229406 3.29e-01 100 chrXI:74439-74804 2.07e-04 52_[+2(1.05e-07)]_27 chrXII:855771-857602 8.33e-03 100 chrIV:600684-602418 1.73e-01 100 chrIV:410199-410815 3.34e-01 100 chrIV:802568-802979 3.64e-12 11_[-1(6.03e-11)]_24_[-2(4.34e-09)]_\ 21 chrIV:331039-333398 2.36e-01 100 chrXII:875251-876139 2.29e-05 53_[-3(2.15e-08)]_32 chrVII:323423-325126 2.59e-02 3_[-3(1.54e-05)]_82 chrXVI:574924-576832 1.25e-01 65_[+3(6.43e-05)]_20 chrXIII:388917-390937 7.69e-01 100 chrXIV:302599-303918 6.17e-01 100 chrXVI:590905-591392 2.79e-03 28_[+3(2.77e-06)]_57 chrXI:258497-258985 4.87e-02 100 chrXII:645918-646301 7.46e-01 100 chrXIII:162941-164371 7.19e-01 100 chrIX:27377-28092 4.23e-01 100 chrXV:1003895-1006723 2.95e-01 100 chrVI:226429-226907 1.29e-06 4_[+3(9.21e-05)]_37_[+3(1.86e-05)]_\ 2_[-1(1.37e-08)]_4 chrVII:227175-228374 8.89e-01 100 chrIX:385386-387116 3.15e-01 100 chrXIII:220067-220947 9.28e-01 100 chrXI:158565-159901 4.30e-01 100 chrXIII:873849-874008 1.54e-01 100 chrIV:118419-118965 1.80e-01 100 chrXII:257603-259506 4.09e-01 100 chrVII:738877-739623 8.02e-02 100 chrIX:254997-257136 5.13e-01 100 chrIV:45194-46195 9.78e-01 100 chrVIII:74756-76524 9.57e-01 100 chrX:542792-542892 2.46e-01 100 chrV:266172-268260 1.80e-01 32_[+3(7.45e-05)]_53 chrXII:95534-95882 9.83e-01 100 chrVII:115345-115705 2.89e-03 12_[+2(7.21e-07)]_67 chrII:642856-643220 3.98e-12 5_[+3(7.18e-07)]_2_[-1(9.46e-08)]_\ 24_[-2(2.42e-08)]_10 chrX:396578-396678 1.80e-12 14_[+3(6.92e-05)]_2_[-1(1.22e-10)]_\ 23_[-2(8.41e-08)]_2 chrV:490653-491973 9.63e-01 100 chrVII:590592-591916 2.27e-01 100 chrII:395543-398243 2.70e-01 100 chrXII:459657-460789 3.97e-01 100 chrXV:423563-423907 7.21e-01 100 chrXV:281984-282405 1.13e-10 19_[+2(8.41e-08)]_23_[+1(1.22e-10)]_\ 14 chrXIV:575065-576292 3.04e-01 100 chrXV:867026-868153 5.41e-03 28_[-3(8.60e-05)]_57 chrX:569197-569297 7.52e-01 100 chrIII:29560-31276 7.21e-01 100 chrI:28254-28950 8.58e-01 100 chrVII:122063-122396 4.20e-01 100 chrX:424289-424389 1.73e-01 100 chrIII:78387-78920 1.41e-01 100 chrX:360513-360613 6.74e-01 100 chrIV:1328766-1329637 1.16e-01 100 chrX:75880-75980 1.41e-01 100 chrIII:141972-142944 1.48e-01 100 chrVII:531396-532408 5.34e-01 100 chrIV:555377-556648 7.14e-02 100 chrXII:950509-953734 3.48e-01 100 chrXIV:391962-392118 6.60e-01 100 chrIV:946176-946571 1.88e-05 50_[+1(1.53e-08)]_27 chrXI:146788-147743 6.44e-02 35_[-3(3.14e-05)]_50 chrX:123569-123669 5.97e-01 100 chrIII:82125-82643 4.00e-01 100 chrXIII:887009-889456 6.47e-01 100 chrIV:599117-600240 1.15e-01 100 chrV:298736-302021 4.81e-01 100 chrVI:131307-131629 3.56e-01 100 chrXIII:554761-556780 1.10e-01 34_[+3(5.54e-05)]_51 chrXVI:108560-114811 1.61e-01 100 chrIX:336122-336619 3.23e-07 32_[-1(1.44e-09)]_24_[-2(6.32e-05)] chrX:523922-524022 8.95e-01 100 chrXV:778216-779503 4.40e-01 100 chrIX:210679-211028 6.37e-03 6_[-3(9.74e-07)]_63_[+3(2.23e-05)]_\ 1 chrXIV:253188-254192 6.70e-01 100 chrXIV:442738-444289 3.36e-01 100 chrIX:127459-128688 3.65e-01 100 chrV:235077-237200 4.88e-01 100 chrVIII:466813-467879 4.74e-01 100 chrXV:348690-349394 6.75e-01 100 chrX:25742-25842 6.85e-01 100 chrXIII:378948-379564 1.53e-02 100 chrXV:670928-672401 3.52e-01 100 chrII:136054-136304 6.62e-03 30_[-1(2.51e-05)]_47 chrIX:391126-392147 4.15e-01 100 chrXIII:287978-290026 5.09e-01 100 chrXII:734629-734930 5.38e-06 72_[+2(2.63e-10)]_7 chrXIII:362954-363289 2.44e-07 37_[+1(8.40e-07)]_3_[-3(5.32e-07)]_\ 1_[+3(6.96e-08)]_6 chrII:555797-558482 5.81e-01 100 chrXII:87853-88540 8.72e-02 27_[+3(3.72e-05)]_10_[-3(4.73e-05)]_\ 33 chrXV:159217-160137 7.89e-01 100 chrXVI:608066-608594 6.76e-01 100 chrX:156141-156241 5.50e-01 100 chrVII:773977-774714 9.17e-09 16_[-3(2.89e-05)]_22_[+2(3.71e-11)]_\ 26 chrXIV:61436-62982 4.88e-01 100 chrVII:771763-772511 4.45e-01 100 chrV:221110-221797 4.05e-01 100 chrVII:599371-601439 1.96e-01 100 chrVII:959845-961608 3.74e-01 100 chrIV:579410-580805 7.91e-02 7_[+1(5.54e-05)]_70 chrXII:707935-711173 2.55e-01 100 chrXV:80301-81491 5.38e-01 100 chrIV:1330268-1330943 1.61e-01 100 chrXVI:689412-689847 1.46e-03 40_[+1(3.99e-07)]_37 chrIX:380101-380869 5.72e-01 100 chrIV:385231-388269 2.00e-01 100 chrXV:663513-664257 9.13e-06 29_[-2(6.43e-10)]_50 chrXV:24270-24817 6.84e-01 100 chrV:406620-409279 2.47e-01 100 chrVII:823352-823705 6.47e-11 3_[+2(6.43e-10)]_26_[+1(9.68e-09)]_\ 27 chrVII:794098-794502 7.88e-01 100 chrXVI:794935-796125 2.90e-01 100 chrVII:483303-483756 8.47e-03 8_[+1(1.66e-06)]_69 chrXIV:413531-416171 5.83e-01 100 chrVI:30164-32424 2.76e-03 40_[+3(2.15e-06)]_45 chrXV:228069-228522 2.64e-01 100 chrX:204556-204656 4.94e-07 14_[+2(6.32e-05)]_24_[+1(1.44e-09)]_\ 18 chrX:234912-235012 3.55e-01 100 chrII:350556-351046 1.76e-04 75_[+2(1.57e-08)]_4 chrVII:938938-939742 1.14e-01 100 chrXIV:461826-462296 1.83e-01 100 chrIX:332847-333151 9.34e-01 100 chrXIV:499596-502792 9.01e-01 100 chrVIII:126453-127938 6.17e-01 100 chrX:662468-662568 9.59e-01 100 chrXII:728294-728615 9.59e-01 100 chrVII:625658-625835 4.84e-01 100 chrXIV:426928-427261 8.19e-01 100 chrX:415719-415819 3.50e-07 [+3(9.74e-07)]_8_[-1(1.62e-07)]_54 chrV:260281-261306 5.30e-02 66_[+3(1.69e-05)]_19 chrVI:63810-65000 8.52e-01 100 chrXV:854002-854850 9.34e-01 100 chrIII:168101-168509 2.37e-07 49_[-1(6.03e-11)]_28 chrXII:704210-704635 1.06e-04 13_[-1(9.80e-05)]_30_[-3(5.32e-07)]_\ 19 chrIV:1256890-1257283 3.39e-04 22_[-2(3.26e-07)]_57 chrXI:38681-39313 6.60e-01 100 chrIV:520737-521157 3.44e-06 74_[+2(4.34e-09)]_5 chrX:348798-348898 8.99e-01 100 chrIV:488436-489134 1.07e-06 65_[-1(1.08e-09)]_12 chrVIII:422961-423806 9.80e-02 50_[+2(4.59e-05)]_29 chrXI:517788-518055 9.92e-01 100 chrV:487078-487546 8.33e-06 72_[-1(9.38e-10)]_5 chrVII:479008-482999 1.06e-01 100 chrVIII:115228-116369 4.67e-01 100 chrXII:737583-738730 9.37e-01 100 chrXIII:572619-573160 1.05e-03 47_[-1(2.91e-07)]_30 chrXVI:498839-499332 8.20e-01 100 chrXV:382940-383963 1.77e-01 100 chrXV:110847-111179 1.44e-09 2_[-1(1.09e-08)]_24_[-2(1.57e-08)]_\ 30 chrXIII:551935-553429 3.66e-01 100 chrII:405705-406390 3.40e-06 7_[+1(1.44e-09)]_70 chrXV:877189-878129 7.18e-01 100 chrXII:568055-571168 8.18e-01 100 chrXIV:229437-230762 1.85e-02 24_[+3(4.44e-06)]_61 chrVII:310623-312662 3.40e-01 100 chrX:293164-293264 2.73e-01 100 chrIV:525421-527237 2.65e-01 100 chrXI:430624-431237 3.59e-01 100 chrX:422434-422534 7.57e-01 100 chrVII:205315-207552 8.95e-01 100 chrXIII:504925-505200 4.65e-01 100 chrV:322027-323339 9.85e-01 100 chrXIII:837771-838274 4.45e-06 17_[+1(1.53e-08)]_5_[-3(9.86e-05)]_\ 40 chrXI:282577-284948 8.65e-01 100 chrVII:705242-707170 1.82e-01 100 chrXV:409061-409963 5.25e-01 100 chrXVI:775664-776022 1.32e-04 22_[-2(2.42e-08)]_57 chrVII:519395-520928 2.56e-01 100 chrXIV:568071-568566 1.20e-02 43_[+3(1.87e-06)]_42 chrVIII:504110-505607 7.15e-01 100 chrXIII:290564-291173 2.29e-07 27_[+1(9.38e-10)]_50 chrX:606035-606135 4.20e-01 100 chrVII:436584-438444 5.33e-01 100 chrXI:354310-356579 4.74e-01 100 chrVII:319216-320124 6.29e-01 100 chrXI:302702-303201 4.85e-02 16_[+2(2.92e-05)]_63 chrXIII:321024-321300 5.16e-07 20_[+3(6.88e-06)]_3_[-1(2.36e-08)]_\ 39 chrXV:988617-989511 3.54e-01 100 chrXVI:39614-40576 1.97e-03 78_[+3(3.14e-07)]_7 chrXIII:352118-352859 3.19e-01 100 chrXII:263130-264316 1.85e-01 100 chrXII:611411-612093 5.59e-01 100 chrI:190180-190541 6.62e-01 100 chrXII:674213-675287 6.60e-01 100 chrXVI:842822-843676 3.69e-01 100 chrVII:786745-788237 3.72e-01 100 chrIII:151132-151498 2.38e-09 22_[-1(1.37e-08)]_25_[-2(6.63e-08)]_\ 9 chrXIV:569698-570049 1.82e-08 26_[+3(2.15e-06)]_6_[-1(1.89e-09)]_\ 30 chrV:550869-551516 6.68e-03 72_[-3(6.88e-06)]_13 chrXIII:287502-287775 1.46e-01 100 chrXVI:856746-857159 1.11e-04 45_[+1(2.36e-08)]_32 chrXIV:173533-174672 4.59e-01 100 chrIV:465186-467471 7.65e-01 100 chrIX:183316-183680 6.24e-06 44_[-2(2.63e-10)]_35 chrVIII:62635-63080 3.40e-02 33_[-3(1.04e-05)]_52 chrIX:96789-97723 1.85e-02 74_[+3(1.04e-05)]_11 chrII:45573-46738 3.96e-01 100 chrIV:1354038-1355585 6.42e-01 100 chrXII:231923-234283 9.35e-01 100 chrIII:161908-163326 5.24e-02 34_[+3(9.86e-05)]_7_[+3(5.97e-05)]_\ 29 chrXIV:763949-764315 6.16e-01 100 chrXV:384688-385051 6.85e-02 100 chrX:115807-115907 2.33e-01 100 chrIX:68657-69936 2.99e-02 [-2(2.21e-05)]_79 chrXIII:463326-463884 2.66e-05 43_[+1(1.44e-09)]_34 chrXV:679574-680888 4.90e-03 73_[+3(3.72e-05)]_12 chrXIII:914892-915615 5.97e-01 100 chrIII:851-1057 6.61e-01 100 chrX:639733-639833 9.18e-01 100 chrXV:520097-520958 9.57e-02 12_[-3(5.97e-05)]_73 chrX:701700-701800 7.42e-01 100 chrXI:612569-613039 2.94e-02 100 chrIV:975719-976721 9.80e-01 100 chrXII:656839-657193 7.44e-07 19_[-2(3.71e-11)]_60 chrXIII:807992-808550 3.49e-12 28_[-1(1.45e-10)]_24_[-2(4.34e-09)]_\ 4 chrXVI:98658-99133 5.56e-04 13_[+3(1.58e-07)]_72 chrIV:764899-765524 8.18e-01 100 chrXII:445049-447628 4.87e-01 100 chrVIII:372687-374103 1.11e-01 100 chrVII:986393-987849 1.01e-01 100 chrXIII:407851-408947 9.25e-01 100 chrV:306311-307735 6.53e-01 100 chrVIII:455603-456677 2.64e-02 21_[+3(1.69e-05)]_64 chrI:65799-67895 1.18e-01 100 chrXII:636667-640202 3.86e-01 100 chrIV:308138-310210 3.87e-01 100 chrX:745095-745195 8.67e-01 100 chrII:452664-453408 5.66e-01 100 chrXII:366010-366574 5.04e-01 100 chrXIV:104615-105397 8.06e-01 100 chrVII:1057741-1058739 2.38e-01 100 chrXIII:752771-754284 2.89e-02 15_[-1(6.99e-05)]_62 chrXII:447829-449084 2.00e-02 21_[-1(5.76e-05)]_56 chrIV:974257-975095 4.57e-04 50_[-3(9.74e-07)]_35 chrV:85127-87100 6.23e-02 76_[-2(7.93e-05)]_3 chrXV:109675-110691 2.07e-01 100 chrXII:358356-361726 2.20e-01 100 chrV:302783-303417 4.64e-01 100 chrXVI:282070-283287 3.03e-03 21_[-3(2.15e-06)]_64 chrXV:832257-832847 7.38e-02 58_[-3(4.04e-05)]_27 chrIV:1449818-1451239 6.01e-01 100 chrIV:1162109-1164767 7.65e-02 31_[-2(6.17e-05)]_48 chrVIII:411010-411730 8.94e-01 100 chrVII:609280-610106 1.48e-02 76_[+3(2.37e-06)]_9 chrXVI:297581-298628 5.73e-01 100 chrII:347427-347918 1.22e-03 37_[+1(8.40e-07)]_40 chrXVI:404480-408221 5.79e-02 43_[-3(3.14e-05)]_42 chrXIII:195948-196281 1.82e-05 7_[-1(6.01e-09)]_70 chrIV:355031-357043 2.67e-01 100 chrII:306319-306822 1.89e-01 62_[+1(9.10e-05)]_15 chrXIII:731990-733477 6.42e-01 100 chrXII:282812-284073 9.94e-03 52_[-2(5.59e-05)]_27 chrXIII:91776-92081 2.54e-01 100 chrVII:364878-366703 7.99e-01 100 chrXV:710143-710519 2.97e-02 75_[+3(5.55e-06)]_10 chrII:36264-36516 2.52e-03 57_[+2(4.65e-07)]_22 chrXIV:495298-495791 6.48e-02 24_[+3(8.60e-05)]_61 chrII:406611-407009 9.56e-01 100 chrIV:1243128-1243324 8.53e-01 100 chrXV:978603-979494 8.43e-03 44_[-3(1.27e-06)]_41 chrII:466246-466904 6.97e-01 100 chrXV:1053832-1054511 5.58e-01 100 chrXIII:159266-160347 6.63e-02 74_[-3(2.43e-05)]_11 chrIV:416573-417143 4.86e-02 51_[+3(4.73e-05)]_34 chrXI:551906-552794 7.50e-03 4_[-3(3.48e-06)]_81 chrIV:884276-886205 5.60e-01 100 chrXVI:700452-700697 3.97e-02 5_[-3(1.41e-05)]_80 chrXII:711382-712743 6.67e-01 100 chrVII:882421-884089 6.84e-01 100 chrV:435632-436005 1.54e-04 35_[-2(6.63e-08)]_44 chrXV:572275-572431 8.15e-01 100 chrIII:308688-308960 2.83e-03 31_[-1(1.25e-05)]_46 chrIV:1161507-1161951 1.88e-01 100 chrV:268970-270244 8.52e-01 100 chrXII:703881-704055 2.63e-01 100 chrVII:779421-779929 5.24e-06 35_[+1(1.09e-08)]_42 chrXI:611924-612327 9.49e-01 100 chrX:538485-538585 2.93e-03 6_[-3(5.32e-07)]_79 chrXI:164967-165470 9.15e-02 100 chrVII:798587-800253 6.22e-01 100 chrXIV:63242-64554 9.25e-01 100 chrVI:227088-227271 8.83e-01 100 chrXII:720513-721428 8.72e-01 100 chrIV:540693-541952 8.02e-01 100 chrI:222909-223074 7.74e-01 100 chrVII:857049-857579 2.12e-03 36_[+3(8.52e-07)]_49 chrXIV:301018-302324 6.85e-01 100 chrVIII:491903-493640 8.18e-01 100 chrIX:248499-249342 1.04e-07 34_[+1(3.99e-07)]_14_[-3(5.61e-08)]_\ 14 chrXIV:506961-507644 8.86e-01 100 chrX:519384-519484 2.83e-02 100 chrXV:796657-798760 7.83e-02 4_[+3(4.73e-05)]_81 chrVII:147948-149019 9.30e-01 100 chrXIV:585442-586841 8.16e-01 100 chrXV:908152-911637 3.62e-01 100 chrV:99911-100333 8.61e-03 60_[+2(7.34e-05)]_19 chrVII:287166-287791 3.39e-02 6_[-2(2.92e-05)]_73 chrV:241937-242428 2.32e-02 45_[+1(2.62e-05)]_32 chrV:23419-23854 2.04e-01 100 chrIX:97979-99462 4.43e-02 100 chrX:435530-435630 2.18e-01 100 chrXVI:435631-436152 2.92e-05 55_[-1(9.46e-08)]_22 chrVII:648000-648494 3.45e-01 100 chrIX:299994-300473 1.79e-05 48_[-1(1.37e-08)]_29 chrIII:127552-127860 5.23e-04 59_[+2(1.05e-07)]_20 chrIV:720587-721587 4.73e-01 100 chrIV:338346-341225 7.29e-01 100 chrIV:1344681-1346068 1.79e-02 1_[+3(1.54e-05)]_84 chrXVI:644613-644995 3.17e-02 100 chrXV:779851-781019 5.47e-01 100 chrVIII:174791-175711 4.08e-01 100 chrX:120299-120399 2.06e-02 57_[+3(3.48e-06)]_28 chrVI:19261-19940 9.92e-01 100 chrV:207378-207989 8.89e-01 100 chrXIII:651442-653018 1.14e-02 57_[-3(2.15e-06)]_28 chrXIV:771652-772461 7.52e-01 100 chrXII:214667-215045 7.72e-02 45_[+3(9.21e-05)]_40 chrXV:726034-726278 7.50e-01 100 chrXI:512992-513607 5.81e-01 100 chrXII:96085-96311 5.58e-01 100 chrXI:518837-521099 4.85e-01 100 chrXII:440437-441712 8.29e-01 100 chrXIII:701982-703314 8.30e-01 100 chrIV:1245675-1246130 9.76e-01 100 chrXI:613221-613600 1.62e-01 100 chrXII:498814-500171 1.13e-01 35_[-3(6.43e-05)]_50 chrXIII:168687-169040 1.38e-07 43_[+1(1.53e-08)]_5_[-3(1.87e-06)]_\ 14 chrXI:230918-231591 2.51e-01 100 chrII:254700-255876 6.20e-01 100 chrIV:427629-428739 8.64e-01 100 chrVI:210321-210878 1.75e-07 30_[+3(2.77e-06)]_28_[-1(1.53e-08)]_\ 4 chrVII:915422-917137 6.37e-02 17_[+1(5.54e-05)]_60 chrXII:242185-243522 4.29e-01 100 chrXV:980113-981424 2.42e-05 42_[+1(6.01e-09)]_35 chrV:249809-250861 3.74e-15 [+2(4.34e-09)]_24_[+1(6.03e-11)]_1_\ [-3(3.97e-06)]_16 chrXV:113448-114997 6.84e-01 100 chrVII:661489-661888 7.17e-01 100 chrIV:433978-435124 1.49e-01 62_[-3(5.97e-05)]_23 chrXIV:480650-481241 7.26e-01 100 chrIV:1269887-1271140 8.62e-01 100 chrIV:491457-492795 5.42e-01 100 chrX:651874-651974 1.45e-02 100 chrVIII:104274-105525 6.02e-01 100 chrXIII:671521-674827 6.00e-01 100 chrIV:721772-722877 7.80e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************