******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--PHD1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:373162-373707 1.0000 100 chrVIII:119719-121693 1.0000 100 chrXV:24344-24815 1.0000 100 chrVII:10252-10415 1.0000 100 chrXI:162297-162752 1.0000 100 chrI:166167-166742 1.0000 100 chrIV:1354418-1356264 1.0000 100 chrXVI:821644-824224 1.0000 100 chrXIII:572698-573170 1.0000 100 chrVII:440489-443052 1.0000 100 chrVII:364924-366727 1.0000 100 chrXI:313220-314010 1.0000 100 chrIV:600720-602281 1.0000 100 chrIII:127533-127907 1.0000 100 chrXVI:406176-407806 1.0000 100 chrIV:1086425-1086624 1.0000 100 chrXI:512859-513609 1.0000 100 chrIX:322989-324387 1.0000 100 chrXIV:560612-560912 1.0000 100 chrIV:975888-977209 1.0000 100 chrXII:416567-417023 1.0000 100 chrIX:316123-318847 1.0000 100 chrII:301112-302188 1.0000 100 chrXI:364554-365218 1.0000 100 chrXVI:108565-110255 1.0000 100 chrVII:384109-384990 1.0000 100 chrXV:638892-639489 1.0000 100 chrXII:92400-92867 1.0000 100 chrVII:787094-788760 1.0000 100 chrXV:779671-781016 1.0000 100 chrXIII:161902-162646 1.0000 100 chrV:135199-136034 1.0000 100 chrXVI:581838-582323 1.0000 100 chrII:504539-505027 1.0000 100 chrIV:667775-668262 1.0000 100 chrXV:520394-520966 1.0000 100 chrIV:915382-916255 1.0000 100 chrXIII:761567-763141 1.0000 100 chrVI:219955-222269 1.0000 100 chrXII:734591-735006 1.0000 100 chrVIII:125890-127512 1.0000 100 chrX:415714-415814 1.0000 100 chrVII:310472-312202 1.0000 100 chrVIII:296846-297235 1.0000 100 chrXII:875062-875998 1.0000 100 chrXIII:258865-259444 1.0000 100 chrXIV:229685-230713 1.0000 100 chrXIV:715987-716607 1.0000 100 chrII:266189-266653 1.0000 100 chrXVI:775571-776063 1.0000 100 chrXIII:91156-92230 1.0000 100 chrIX:25942-26646 1.0000 100 chrXV:487432-487767 1.0000 100 chrXIII:253900-254077 1.0000 100 chrVII:845458-846171 1.0000 100 chrXI:518656-521190 1.0000 100 chrX:348838-348938 1.0000 100 chrVI:183287-184158 1.0000 100 chrXVI:280534-282945 1.0000 100 chrVI:95466-95938 1.0000 100 chrXI:307851-308716 1.0000 100 chrXII:855801-856263 1.0000 100 chrXII:47491-49170 1.0000 100 chrXI:3-180 1.0000 100 chrV:221426-221803 1.0000 100 chrIV:1075294-1075765 1.0000 100 chrVII:148167-149507 1.0000 100 chrXIII:352093-352634 1.0000 100 chrXIV:96039-96472 1.0000 100 chrIII:74-1765 1.0000 100 chrXII:546518-547517 1.0000 100 chrVII:959322-959645 1.0000 100 chrXI:74385-74988 1.0000 100 chrIII:82235-82662 1.0000 100 chrXII:1017759-1019431 1.0000 100 chrIII:123183-123833 1.0000 100 chrV:266197-268132 1.0000 100 chrXII:447872-449052 1.0000 100 chrIV:1161466-1162579 1.0000 100 chrXII:214626-215068 1.0000 100 chrVII:185391-185910 1.0000 100 chrXVI:502487-503283 1.0000 100 chrVI:64167-65380 1.0000 100 chrXIV:675457-676022 1.0000 100 chrVII:774095-774688 1.0000 100 chrXII:423708-424733 1.0000 100 chrXVI:404250-405903 1.0000 100 chrXII:932056-932568 1.0000 100 chrXV:925174-925417 1.0000 100 chrVII:1050156-1050610 1.0000 100 chrVI:222758-224158 1.0000 100 chrXI:772-1077 1.0000 100 chrXV:1003923-1004952 1.0000 100 chrIV:322138-323563 1.0000 100 chrXV:160316-160711 1.0000 100 chrVII:677807-678069 1.0000 100 chrXVI:214524-216319 1.0000 100 chrXII:592336-592825 1.0000 100 chrXVI:819340-820132 1.0000 100 chrVIII:358285-358758 1.0000 100 chrV:469265-469696 1.0000 100 chrIII:149728-150197 1.0000 100 chrXVI:608136-608920 1.0000 100 chrXIII:26205-26469 1.0000 100 chrXII:366040-366552 1.0000 100 chrII:702146-702462 1.0000 100 chrIV:387533-388082 1.0000 100 chrXVI:927701-928585 1.0000 100 chrXIII:67664-68019 1.0000 100 chrXV:92688-94794 1.0000 100 chrXIII:162957-164330 1.0000 100 chrIX:174686-175224 1.0000 100 chrIV:520675-521467 1.0000 100 chrIII:107165-107827 1.0000 100 chrV:41772-42711 1.0000 100 chrXVI:941383-942851 1.0000 100 chrXV:444612-446384 1.0000 100 chrXII:962829-963284 1.0000 100 chrIX:138127-139252 1.0000 100 chrXV:383047-383689 1.0000 100 chrVII:702789-703588 1.0000 100 chrI:182308-183189 1.0000 100 chrI:68363-68758 1.0000 100 chrIV:592379-592889 1.0000 100 chrV:310937-312317 1.0000 100 chrVII:515671-518955 1.0000 100 chrXV:986822-987957 1.0000 100 chrXIII:768187-768448 1.0000 100 chrXV:853960-854798 1.0000 100 chrX:422710-422810 1.0000 100 chrVII:592115-592937 1.0000 100 chrX:360278-360378 1.0000 100 chrXII:636726-639971 1.0000 100 chrXII:242182-243427 1.0000 100 chrXVI:785665-786778 1.0000 100 chrXIII:586354-586899 1.0000 100 chrXIV:501066-502783 1.0000 100 chrIV:1278227-1279362 1.0000 100 chrVII:533828-535191 1.0000 100 chrXI:430681-432327 1.0000 100 chrXI:302709-303242 1.0000 100 chrV:214543-214942 1.0000 100 chrXI:517789-518285 1.0000 100 chrXV:594212-594648 1.0000 100 chrIV:1156234-1156951 1.0000 100 chrIV:980663-981159 1.0000 100 chrVII:443336-443844 1.0000 100 chrX:517642-517742 1.0000 100 chrXI:21351-21890 1.0000 100 chrVII:986378-987774 1.0000 100 chrXIV:62021-64512 1.0000 100 chrVII:930789-931693 1.0000 100 chrXIII:463325-463882 1.0000 100 chrIV:555392-556606 1.0000 100 chrVIII:134104-134654 1.0000 100 chrIV:1305399-1305841 1.0000 100 chrVII:555129-557493 1.0000 100 chrVIII:521630-522460 1.0000 100 chrII:59648-61253 1.0000 100 chrXII:498304-499699 1.0000 100 chrVII:1000068-1000571 1.0000 100 chrXIII:290575-291119 1.0000 100 chrV:550857-551601 1.0000 100 chrVII:277023-278731 1.0000 100 chrIV:599739-600323 1.0000 100 chrIV:340265-341667 1.0000 100 chrXII:1051905-1052230 1.0000 100 chrVIII:48198-48723 1.0000 100 chrII:391448-391848 1.0000 100 chrXV:109506-110671 1.0000 100 chrX:123567-123667 1.0000 100 chrXV:159248-160131 1.0000 100 chrXI:326077-327606 1.0000 100 chrXIV:173590-174652 1.0000 100 chrVIII:34386-36380 1.0000 100 chrXIV:585489-586577 1.0000 100 chrX:355191-355291 1.0000 100 chrIV:1236434-1237979 1.0000 100 chrX:291030-291130 1.0000 100 chrIX:175385-175628 1.0000 100 chrIV:359361-359795 1.0000 100 chrXVI:856731-857167 1.0000 100 chrV:396180-397851 1.0000 100 chrVIII:62559-62921 1.0000 100 chrI:181131-181521 1.0000 100 chrXV:571688-572156 1.0000 100 chrIV:410167-410790 1.0000 100 chrII:36243-36797 1.0000 100 chrIX:370226-370672 1.0000 100 chrIV:216578-218078 1.0000 100 chrXII:515285-516896 1.0000 100 chrIII:78264-78898 1.0000 100 chrXII:808970-809552 1.0000 100 chrXI:666007-666265 1.0000 100 chrXVI:75095-75331 1.0000 100 chrIX:141805-142341 1.0000 100 chrI:71758-73255 1.0000 100 chrIX:231288-232412 1.0000 100 chrVIII:103574-105466 1.0000 100 chrX:233731-233831 1.0000 100 chrXV:29275-30842 1.0000 100 chrXIII:837749-838231 1.0000 100 chrIV:619698-620263 1.0000 100 chrII:165043-165883 1.0000 100 chrVII:483297-483705 1.0000 100 chrXI:617724-619309 1.0000 100 chrV:443050-443363 1.0000 100 chrX:181752-181852 1.0000 100 chrVII:412957-413703 1.0000 100 chrXIV:575191-576163 1.0000 100 chrXVI:519547-520529 1.0000 100 chrXII:903320-904446 1.0000 100 chrXVI:425311-425611 1.0000 100 chrXII:369643-371364 1.0000 100 chrXV:236041-236591 1.0000 100 chrIX:388206-388886 1.0000 100 chrV:305817-306937 1.0000 100 chrXVI:378631-378996 1.0000 100 chrXI:578695-579375 1.0000 100 chrXV:234053-234821 1.0000 100 chrIV:1359424-1361334 1.0000 100 chrX:703244-703344 1.0000 100 chrIV:541288-541916 1.0000 100 chrIV:411232-411669 1.0000 100 chrX:157438-157538 1.0000 100 chrXIII:808013-808530 1.0000 100 chrII:44954-45378 1.0000 100 chrXII:727654-730291 1.0000 100 chrVII:110306-110789 1.0000 100 chrIX:197372-197852 1.0000 100 chrVII:412037-412580 1.0000 100 chrXV:901432-901647 1.0000 100 chrVII:479173-482719 1.0000 100 chrXV:710116-710524 1.0000 100 chrXII:232096-234259 1.0000 100 chrIV:306696-310169 1.0000 100 chrIII:30556-31170 1.0000 100 chrII:6188-6514 1.0000 100 chrXIII:420182-420885 1.0000 100 chrIII:227753-228977 1.0000 100 chrIX:299998-300480 1.0000 100 chrXI:490765-491463 1.0000 100 chrIII:90850-91186 1.0000 100 chrII:466277-466883 1.0000 100 chrIV:946145-946617 1.0000 100 chrV:486774-487588 1.0000 100 chrXVI:768631-769498 1.0000 100 chrVIII:16577-18245 1.0000 100 chrXV:443798-444234 1.0000 100 chrV:167091-167614 1.0000 100 chrXI:140784-141487 1.0000 100 chrIV:1256793-1257283 1.0000 100 chrXII:449374-450429 1.0000 100 chrV:490928-491858 1.0000 100 chrXII:856437-857551 1.0000 100 chrVIII:173566-175765 1.0000 100 chrXVI:701895-702327 1.0000 100 chrXVI:338670-339237 1.0000 100 chrXI:258095-259993 1.0000 100 chrIX:178835-179066 1.0000 100 chrXV:407563-408218 1.0000 100 chrIV:802555-803002 1.0000 100 chrV:441809-442705 1.0000 100 chrXV:1053882-1054736 1.0000 100 chrIII:295298-295924 1.0000 100 chrVII:590733-591651 1.0000 100 chrXVI:585794-587663 1.0000 100 chrXIII:550007-551829 1.0000 100 chrXIV:525067-525284 1.0000 100 chrXVI:640635-641609 1.0000 100 chrVII:273-1170 1.0000 100 chrXII:793776-796857 1.0000 100 chrXIII:296737-298880 1.0000 100 chrVIII:147719-148757 1.0000 100 chrI:28553-28911 1.0000 100 chrI:190012-191715 1.0000 100 chrVII:544407-544847 1.0000 100 chrXIII:914884-915761 1.0000 100 chrXIII:320905-321326 1.0000 100 chrXI:354775-356828 1.0000 100 chrXIV:289343-290137 1.0000 100 chrXIV:776669-777430 1.0000 100 chrXII:522161-522429 1.0000 100 chrIV:1461465-1461847 1.0000 100 chrXII:628198-628683 1.0000 100 chrV:241938-242599 1.0000 100 chrVIII:455210-456016 1.0000 100 chrXI:67102-69246 1.0000 100 chrVII:561466-561733 1.0000 100 chrXII:374193-374671 1.0000 100 chrV:138446-141445 1.0000 100 chrXIV:546536-547667 1.0000 100 chrX:607891-607991 1.0000 100 chrIV:221380-222361 1.0000 100 chrVII:876182-877152 1.0000 100 chrXII:919429-923681 1.0000 100 chrXII:710560-710881 1.0000 100 chrII:405680-406266 1.0000 100 chrVII:254094-254728 1.0000 100 chrV:207352-207876 1.0000 100 chrXV:988246-989618 1.0000 100 chrXI:99702-100078 1.0000 100 chrVI:191213-191767 1.0000 100 chrVII:422882-423393 1.0000 100 chrXII:656822-657200 1.0000 100 chrX:744983-745083 1.0000 100 chrV:335469-336373 1.0000 100 chrX:542774-542874 1.0000 100 chrXIII:388325-389572 1.0000 100 chrX:374176-374276 1.0000 100 chrII:392533-394844 1.0000 100 chrVII:828475-828983 1.0000 100 chrXVI:112104-114959 1.0000 100 chrXIII:220044-221094 1.0000 100 chrIX:325737-326138 1.0000 100 chrV:460558-462229 1.0000 100 chrXI:381572-382475 1.0000 100 chrX:396591-396691 1.0000 100 chrII:9450-9876 1.0000 100 chrXIV:374652-375135 1.0000 100 chrXIII:224101-224581 1.0000 100 chrVII:766013-766971 1.0000 100 chrV:422735-425379 1.0000 100 chrXIII:887011-889304 1.0000 100 chrIV:488416-489142 1.0000 100 chrVIII:381449-382534 1.0000 100 chrIV:14-235 1.0000 100 chrXV:967970-968514 1.0000 100 chrXV:161124-162019 1.0000 100 chrVII:323412-325100 1.0000 100 chrXIV:738807-740167 1.0000 100 chrII:642822-643247 1.0000 100 chrIV:1361770-1362683 1.0000 100 chrVI:167243-167686 1.0000 100 chrXV:464280-464739 1.0000 100 chrX:390800-390900 1.0000 100 chrXIII:652042-652954 1.0000 100 chrIV:1086835-1087726 1.0000 100 chrXII:241616-242018 1.0000 100 chrXIV:631596-632122 1.0000 100 chrXIII:480383-480832 1.0000 100 chrXII:1028194-1028600 1.0000 100 chrV:434381-434978 1.0000 100 chrIV:644377-645367 1.0000 100 chrIV:129857-131236 1.0000 100 chrXV:347421-347776 1.0000 100 chrXVI:653729-655033 1.0000 100 chrX:523761-523861 1.0000 100 chrIV:1162976-1164647 1.0000 100 chrXIV:442730-444807 1.0000 100 chrV:174125-175042 1.0000 100 chrVIII:400999-401331 1.0000 100 chrIX:183295-183793 1.0000 100 chrVIII:411017-411648 1.0000 100 chrVII:661533-661987 1.0000 100 chrIV:914020-914829 1.0000 100 chrXV:274477-275015 1.0000 100 chrX:531599-531699 1.0000 100 chrXVI:731669-732412 1.0000 100 chrXV:113602-113927 1.0000 100 chrV:117347-118299 1.0000 100 chrIV:519651-519974 1.0000 100 chrV:354695-355340 1.0000 100 chrVI:210317-210907 1.0000 100 chrII:408634-408935 1.0000 100 chrXIII:19055-20610 1.0000 100 chrIV:491460-492690 1.0000 100 chrVII:824471-826262 1.0000 100 chrII:644926-645433 1.0000 100 chrII:554485-555106 1.0000 100 chrXV:391006-392330 1.0000 100 chrX:606079-606179 1.0000 100 chrX:650861-650961 1.0000 100 chrX:424245-424345 1.0000 100 chrXII:1011718-1012853 1.0000 100 chrXIV:771649-772448 1.0000 100 chrXI:46601-47000 1.0000 100 chrXV:28422-29098 1.0000 100 chrVII:545132-546005 1.0000 100 chrVI:180631-181270 1.0000 100 chrVIII:562331-562594 1.0000 100 chrXI:219724-220120 1.0000 100 chrXIV:763975-764561 1.0000 100 chrVII:706896-707185 1.0000 100 chrVII:989746-990509 1.0000 100 chrXIII:225163-226559 1.0000 100 chrVII:287144-287665 1.0000 100 chrVIII:381055-381240 1.0000 100 chrIV:83327-83949 1.0000 100 chrVI:224320-225352 1.0000 100 chrII:88938-89936 1.0000 100 chrXIII:302726-303323 1.0000 100 chrV:53498-54042 1.0000 100 chrIV:1175743-1176093 1.0000 100 chrIV:1344614-1346010 1.0000 100 chrII:181338-181663 1.0000 100 chrVIII:451288-452995 1.0000 100 chrIV:321649-321958 1.0000 100 chrVII:726404-728123 1.0000 100 chrXIII:131613-132100 1.0000 100 chrXIV:104596-105043 1.0000 100 chrII:377461-378255 1.0000 100 chrVIII:382725-383341 1.0000 100 chrXV:348772-349423 1.0000 100 chrVI:137238-137700 1.0000 100 chrXV:31370-31932 1.0000 100 chrXV:1027910-1029098 1.0000 100 chrV:377795-378800 1.0000 100 chrV:288143-288767 1.0000 100 chrXVI:403905-404091 1.0000 100 chrX:196858-196958 1.0000 100 chrVIII:505799-506370 1.0000 100 chrIX:68252-68505 1.0000 100 chrV:66758-69406 1.0000 100 chrXI:334120-334960 1.0000 100 chrXIV:6616-7465 1.0000 100 chrXII:167750-168246 1.0000 100 chrII:555767-556185 1.0000 100 chrVIII:115145-116427 1.0000 100 chrXIV:413613-414929 1.0000 100 chrII:226970-227354 1.0000 100 chrXVI:810579-812595 1.0000 100 chrXIII:305971-307269 1.0000 100 chrVII:730963-731455 1.0000 100 chrIV:1401214-1403373 1.0000 100 chrXIII:731843-733526 1.0000 100 chrVII:610291-611474 1.0000 100 chrVII:345849-346614 1.0000 100 chrXI:7839-8281 1.0000 100 chrX:538024-538124 1.0000 100 chrXII:261972-263983 1.0000 100 chrII:415518-416376 1.0000 100 chrX:26252-26352 1.0000 100 chrXVI:209646-210470 1.0000 100 chrXIII:797532-798237 1.0000 100 chrVII:398479-400132 1.0000 100 chrX:378213-378313 1.0000 100 chrX:540714-540814 1.0000 100 chrIV:1506591-1506816 1.0000 100 chrXVI:880095-880555 1.0000 100 chrXIII:747654-748144 1.0000 100 chrVIII:148925-149277 1.0000 100 chrIV:437538-438116 1.0000 100 chrXV:504931-506732 1.0000 100 chrIV:1450037-1451204 1.0000 100 chrXVI:920854-921505 1.0000 100 chrIV:992721-993395 1.0000 100 chrXIII:379026-379595 1.0000 100 chrXV:758917-759509 1.0000 100 chrIV:1150697-1151168 1.0000 100 chrIV:591716-592045 1.0000 100 chrXV:228105-228561 1.0000 100 chrXII:818501-820420 1.0000 100 chrX:227735-227835 1.0000 100 chrVI:82124-84520 1.0000 100 chrXV:281989-282402 1.0000 100 chrVI:226402-226927 1.0000 100 chrVIII:5429-5590 1.0000 100 chrVI:101115-102213 1.0000 100 chrXIV:88950-89724 1.0000 100 chrIV:385804-387357 1.0000 100 chrXIV:568051-568534 1.0000 100 chrI:73425-73594 1.0000 100 chrVII:938920-939762 1.0000 100 chrXV:866301-868098 1.0000 100 chrXI:379685-380040 1.0000 100 chrXII:687646-687910 1.0000 100 chrX:139185-139285 1.0000 100 chrIV:1300421-1301348 1.0000 100 chrIV:218290-218618 1.0000 100 chrXVI:302660-304281 1.0000 100 chrV:362121-362489 1.0000 100 chrIV:118430-118727 1.0000 100 chrXI:458003-459016 1.0000 100 chrXV:908441-909166 1.0000 100 chrXIV:87469-87734 1.0000 100 chrXIII:826448-826921 1.0000 100 chrXII:704171-705016 1.0000 100 chrXVI:744074-744576 1.0000 100 chrIV:1489085-1490453 1.0000 100 chrVII:121950-122930 1.0000 100 chrX:414770-414870 1.0000 100 chrVII:882420-884008 1.0000 100 chrII:332299-333210 1.0000 100 chrVIII:205758-206470 1.0000 100 chrIX:177575-178531 1.0000 100 chrIX:336100-336610 1.0000 100 chrXIII:5451-5662 1.0000 100 chrVII:541708-542181 1.0000 100 chrV:302791-303353 1.0000 100 chrXV:424020-424698 1.0000 100 chrXII:950115-953693 1.0000 100 chrIV:1201535-1202404 1.0000 100 chrXVI:435649-436207 1.0000 100 chrX:73399-73499 1.0000 100 chrXV:340143-340586 1.0000 100 chrIII:298924-299437 1.0000 100 chrVI:162025-162885 1.0000 100 chrIX:426863-427810 1.0000 100 chrIV:229122-231053 1.0000 100 chrVII:371219-371539 1.0000 100 chrXVI:575190-575650 1.0000 100 chrXII:605145-605611 1.0000 100 chrXV:384637-385076 1.0000 100 chrIV:1507012-1507736 1.0000 100 chrXI:261112-262133 1.0000 100 chrXII:975780-976202 1.0000 100 chrXII:713147-713637 1.0000 100 chrV:492193-492565 1.0000 100 chrXV:980129-981065 1.0000 100 chrVII:531259-532145 1.0000 100 chrXV:168120-168383 1.0000 100 chrXIV:417767-418380 1.0000 100 chrVII:951394-951732 1.0000 100 chrXVI:172759-174105 1.0000 100 chrXII:36667-37139 1.0000 100 chrIV:117160-118201 1.0000 100 chrXII:83934-84334 1.0000 100 chrI:138972-139369 1.0000 100 chrXV:1025715-1026043 1.0000 100 chrXIV:102577-103482 1.0000 100 chrIV:578946-580695 1.0000 100 chrVII:878323-879017 1.0000 100 chrXV:978804-979563 1.0000 100 chrX:617713-617813 1.0000 100 chrXII:234594-235128 1.0000 100 chrXII:780629-781900 1.0000 100 chrIII:151047-151523 1.0000 100 chrX:354043-354143 1.0000 100 chrVII:401408-401620 1.0000 100 chrIX:248490-249429 1.0000 100 chrXVI:55883-56423 1.0000 100 chrXIII:195928-196302 1.0000 100 chrIII:177028-178788 1.0000 100 chrXII:201655-202680 1.0000 100 chrX:292541-292641 1.0000 100 chrXIV:725905-726393 1.0000 100 chrXIII:362933-363686 1.0000 100 chrXV:287783-288560 1.0000 100 chrVII:968574-969215 1.0000 100 chrXV:976376-976706 1.0000 100 chrII:350622-351052 1.0000 100 chrXVI:572177-572645 1.0000 100 chrX:662555-662655 1.0000 100 chrXV:253783-254715 1.0000 100 chrVI:19349-19934 1.0000 100 chrXIII:222660-223813 1.0000 100 chrVIII:379294-380238 1.0000 100 chrXII:783841-784578 1.0000 100 chrXVI:188324-189278 1.0000 100 chrXII:673493-674569 1.0000 100 chrII:197279-197855 1.0000 100 chrIII:142106-142958 1.0000 100 chrII:477027-477785 1.0000 100 chrVII:319236-320179 1.0000 100 chrIV:1080515-1081022 1.0000 100 chrXVI:622296-623156 1.0000 100 chrXIII:372194-372668 1.0000 100 chrXI:146795-147513 1.0000 100 chrXIV:330741-331633 1.0000 100 chrIV:1013405-1013977 1.0000 100 chrVIII:388668-389003 1.0000 100 chrXV:480049-480882 1.0000 100 chrXI:202326-203232 1.0000 100 chrV:270384-271110 1.0000 100 chrVII:405461-405821 1.0000 100 chrXV:300881-301462 1.0000 100 chrXVI:828831-829440 1.0000 100 chrXIV:602077-602588 1.0000 100 chrXIV:662066-662498 1.0000 100 chrIX:210659-210960 1.0000 100 chrX:90033-90133 1.0000 100 chrXVI:39903-40611 1.0000 100 chrXV:216278-216701 1.0000 100 chrIV:1468820-1469091 1.0000 100 chrV:51753-53310 1.0000 100 chrVII:648785-649365 1.0000 100 chrII:236534-236898 1.0000 100 chrV:270069-270227 1.0000 100 chrXIV:499171-500863 1.0000 100 chrIV:538842-539326 1.0000 100 chrXIII:253328-253740 1.0000 100 chrV:152217-153272 1.0000 100 chrIX:129464-130198 1.0000 100 chrIII:137732-138997 1.0000 100 chrVII:436717-439837 1.0000 100 chrIV:1016963-1017501 1.0000 100 chrII:87932-88607 1.0000 100 chrVII:609310-610100 1.0000 100 chrXIV:240925-242427 1.0000 100 chrXV:663486-664117 1.0000 100 chrXII:897678-899723 1.0000 100 chrIV:433918-434950 1.0000 100 chrX:115786-115886 1.0000 100 chrXIV:351296-352984 1.0000 100 chrIV:392508-393400 1.0000 100 chrXIV:783681-784323 1.0000 100 chrXIV:758550-760053 1.0000 100 chrXIV:426654-427320 1.0000 100 chrXII:731427-732327 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--PHD1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--PHD1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--PHD1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.298 C 0.202 G 0.202 T 0.298 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--PHD1/background): A 0.303 C 0.197 G 0.197 T 0.303 ******************************************************************************** ******************************************************************************** MOTIF AAYCRDRRGRTCCBSGGTTCGATYCCSVK MEME-1 width = 29 sites = 82 llr = 1554 E-value = 6.4e-312 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAYCRDRRGRTCCBSGGTTCGATYCCSVK MEME-1 Description -------------------------------------------------------------------------------- Simplified A 77::2346142:3:22::::3a2::::3: pos.-specific C 21372:111:17533::::a::2597541 probability G :123454376::1457a:::7:1:::435 matrix T 1151221:::7313:::aa:::55121:3 bits 2.3 * * 2.1 * * 1.9 * * * 1.6 **** * * Relative 1.4 ****** * Entropy 1.2 * * * ******* ** (27.3 bits) 0.9 * ** * ******* **** 0.7 * **** ******* ***** 0.5 **** **************** ****** 0.2 ***************************** 0.0 ----------------------------- Multilevel AATCGGAAGGTCCGGGGTTCGATTCCCCG consensus CGAAGG AATACCA A CC TGGT sequence T T A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCRDRRGRTCCBSGGTTCGATYCCSVK MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXIV:602077-602588 + 67 1.15e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGCT AGAGA chrII:197279-197855 + 14 1.15e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrXVI:880095-880555 - 29 1.15e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrV:443050-443363 - 54 1.15e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGCT AGAGACCATA chrXII:1051905-1052230 - 62 1.15e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrIV:667775-668262 - 47 1.15e-12 CCGTGCTAAT AACGCGGGGATCAGCGGTTCGATCCCGCT AGAGACCATT chrXIV:631596-632122 - 45 1.61e-12 CTCGCTTAGG GTGCGGGAGGTCCCGGGTTCGAGTCCCGG CTCGCCCCCA chrIV:1016963-1017501 - 33 2.24e-12 ATCACGTTCT CACCGTGGAGACCGGGGTTCGACTCCCCG CTTCGGAGTT chrVII:401408-401620 - 71 2.24e-12 T CACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTA chrV:354695-355340 + 2 2.24e-12 T CACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTA chrIX:197372-197852 + 65 2.24e-12 ATCACGTTCT CACCGTGGAGACCGGGGTTCGACTCCCCG CTTCGGA chrIX:370226-370672 + 53 2.24e-12 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTA chrXIII:290575-291119 + 39 2.24e-12 ATCACGCTTT CACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTC chrIII:82235-82662 - 72 2.24e-12 . CACCGTGGAGACCGGGGTTCGACTCCCCG TATCGGAGTT chrIII:151047-151523 - 57 9.02e-12 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTT chrX:414770-414870 + 42 9.02e-12 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTAA chrXIII:480383-480832 - 72 9.02e-12 . AATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTTC chrIX:299998-300480 - 47 9.02e-12 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCCT ACAGGGCTAT chrXVI:581838-582323 + 68 9.02e-12 TATGACTCTT AATCATAAGGTTAGGGGTTCGAGCCCCCT ACAG chrXV:281989-282402 + 53 2.81e-11 CCAACGTTGC CATCGTTGGGCCCCCGGTTCGATTCCGGG CTTGCGCATT chrXIII:747654-748144 - 51 3.68e-11 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGTT chrXIII:131613-132100 - 27 3.68e-11 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrVII:828475-828983 - 52 3.68e-11 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrX:374176-374276 - 40 3.68e-11 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGCT chrXI:162297-162752 - 21 3.68e-11 TCTGACTTCT AATCAGAAGATTATGGGTTCGACCCCCAT CGTGAGTGTT chrXV:300881-301462 + 41 7.09e-11 GAGACAAAGC ATGCGAGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCCT chrXIII:195928-196302 - 11 7.09e-11 AAGACAAAGC ATGCGAGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCTT chrXV:464280-464739 + 56 7.09e-11 AAGACAAAGC ATGCGAGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCTT chrXII:92400-92867 + 31 7.09e-11 AAGACAAAGC ATGCGAGAGGCCCTGGGTTCAATTCCCAG CTCGCCCCTT chrIV:1075294-1075765 - 1 1.50e-10 TTGCCTTCAC ACGGCAAAGGTCCCGAGTTCGATCCTCGG chrIV:802555-803002 - 11 1.91e-10 TTTCGGTTTT GATCCGGACAACCCCGGTTCGAATCCGGG TAGGACCTCT chrVIII:134104-134654 + 27 1.91e-10 TTTCGGTTTT GATCCGGACAACCCCGGTTCGAATCCGGG TAGGACCTTT chrXV:663486-664117 - 69 2.71e-10 AAC ACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCATT chrXIII:372194-372668 - 72 2.71e-10 . ACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCATT chrX:378213-378313 + 46 2.71e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCAAT chrVII:412037-412580 - 44 2.71e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCAAG chrXIII:586354-586899 - 68 2.71e-10 TAAC ACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCATT chrV:469265-469696 + 64 2.71e-10 TCTGCTTAAC ACGCAGAACGTCCCCAGTTCGATCCTGGG CGAAATCA chrV:492193-492565 - 31 3.42e-10 TCTGGCTACG AACCAGAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGGA chrXII:374193-374671 + 9 3.42e-10 TGGCTACG AACCAGAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGAT chrXI:578695-579375 + 39 3.42e-10 TAAGCAAGGA TACCGAAATGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrIV:619698-620263 - 47 3.42e-10 TCTGGCTACG AACCAGAAGATTCCAGGTTCAAGTCCTGG CGGGGAAGAT chrXIV:104596-105043 + 72 5.98e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGAT chrII:266189-266653 + 43 5.98e-10 CCACACTAGT AATGTGGAGATCATCGGTTCAAATCCGAT TGGAAGCATT chrXI:219724-220120 + 59 7.43e-10 CTCCCTTAGC ATGGGAGAGGTCTCCGGTTCGATTCCGGA CTCGTCCAAT chrXVI:856731-857167 + 39 7.43e-10 CTCCCTTAGC ATGGGAGAGGTCTCCGGTTCGATTCCGGA CTCGTCCATT chrXI:517789-518285 + 37 7.43e-10 CTCCCTTAGC ATGGGAGAGGTCTCCGGTTCGATTCCGGA CTCGTCCATT chrVII:774095-774688 + 44 7.43e-10 CTCCCTTAGC ATGGGAGAGGTCTCCGGTTCGATTCCGGA CTCGTCCAAA chrXIII:379026-379595 - 51 1.02e-09 ATAAGATTGC AATCGAAGGGTTGCAGGTTCAATTCCTGT CCGTTTCAAT chrVII:287144-287665 - 4 1.02e-09 ATAAGATTGC AATCGAAGGGTTGCAGGTTCAATTCCTGT CCG chrXI:302709-303242 + 62 1.02e-09 ATAAGATTGC AATCGAAGGGTTGCAGGTTCAATTCCTGT CCGTTTCATT chrX:415714-415814 - 17 1.02e-09 ATAAGATTGC AATCGAAGGGTTGCAGGTTCAATTCCTGT CCGTTTCAAT chrXIII:808013-808530 - 33 1.71e-09 TTTCGGTTCT GATCCGAACAACCCCAGTTCGAATCCGGG TGGGACCTTC chrXIV:96039-96472 - 44 2.81e-09 CCCACCCTTC CAAGGTGGGGACACGGGTTCGATTCTCGT ACCGCTCAAA chrVIII:358285-358758 - 15 4.12e-09 TCGGTCAAGT TATCTGGAGGTCCTGTGTTCGATCCACAG AATTCGCATA chrXIII:352093-352634 + 21 4.12e-09 TCGGTCAAGT TATCTGGAGGTCCTGTGTTCGATCCACAG AATTCGCATT chrVI:210317-210907 - 65 4.97e-09 ACTACGA AATCTTGAGATCGGGCGTTCGACTCGCCC CCGGGAGATA chrIV:946145-946617 + 33 4.97e-09 ATCACTACGA AATCTTGAGATCGGGCGTTCGACTCGCCC CCGGGAGATT chrXIII:837749-838231 + 40 4.97e-09 ACCACTACGA AATCTTGAGATCGGGCGTTCGACTCGCCC CCGGGAGATA chrXIII:572698-573170 - 7 5.97e-09 TCAGTCTCAT AATCTGAAGGTCGAGAGTTCGAACCTCCC CTGGAG chrIV:1256793-1257283 - 28 8.56e-09 TCATGCTTCC CAAGCATGGGGCCCGGGTTCGATTCCCGG CTTCCGCATT chrXII:975780-976202 - 50 9.35e-09 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrVII:730963-731455 + 15 9.35e-09 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXI:74385-74988 + 25 9.35e-09 TGCGACTGTT AATCGCAAGATCGTGAGTTCAACCCTCAC TGGGGTCGCT chrXVI:435649-436207 - 23 1.21e-08 GCAGATTGCA AATCTGTTGGTCCTTAGTTCGATCCTGAG TGCGAGCTTT chrII:642822-643247 - 31 1.21e-08 GCAGATTGCA AATCTGTTGGTCCTTAGTTCGATCCTGAG TGCGAGCTTC chrXVI:775571-776063 - 6 1.21e-08 GCAGATTGCA AATCTGTTGGTCCTTAGTTCGATCCTGAG TGCGA chrIX:336100-336610 - 52 2.18e-08 GGGCGCTTGT CGCGTGCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrII:405680-406266 + 72 2.18e-08 GGGCGCTTGT CGCGTGCCAGATCGGGGTTCAATTCCCCG chrVII:544407-544847 - 8 2.18e-08 GGGCGCTTGT CGCGTGCCAGATCGGGGTTCAATTCCCCG TCGCGGA chrX:355191-355291 + 4 2.18e-08 TGT CGCGTGCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXIII:463325-463882 + 36 2.18e-08 GGGCGCTTGT CGCGTGCCAGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXIV:725905-726393 + 32 2.77e-08 TAAAAAAAAA TACTGAAGGATGCGAGGTTCGAACTCGCG CGGACAACCG chrX:424245-424345 + 1 2.77e-08 . TACTGAAGGATGCGAGGTTCGAACTCGCG CGGACAACCG chrII:9450-9876 - 28 2.77e-08 TCAAAAAAAA TACTGAAGGATGCGAGGTTCGAACTCGCG CGGACAACCG chrIV:519651-519974 - 39 3.25e-08 AAAAATAAGT TATTGAAGGATGCGAGGTTCGAACTCGCG CGGACAACCG chrXVI:744074-744576 + 44 5.98e-08 TTGCACTTGT AATGCAAAGGTCGTTAGTTCAATTCTGAC AGGTGGCAAA chrIII:149728-150197 + 43 8.60e-08 CAGGGCTCAT AACCCTGATGTCCTCGGATCGAAACCGAG CGGCGCTATT chrVII:483297-483705 + 27 4.14e-07 CTGCGGTAAT TATCGCCGGATCTCCGCTTCGAGACCGGG TTTGTTTTCA chrVIII:379294-380238 - 13 6.24e-07 CACATTTACC ATTTGAGGGATCTGAAGATCAAGTCCGCC TTAAGGGTGC chrIV:488416-489142 + 65 8.73e-07 ATAAAAAAGA TTCTGATCCAACCGAGGTTCGAACTCGGG ATCTTCG chrXVI:828831-829440 + 66 1.21e-06 CTATGCGGTT AATTCTGTCACTAGGGGTCCGAATCTCGG ATTAAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCRDRRGRTCCBSGGTTCGATYCCSVK MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:602077-602588 1.2e-12 66_[+1]_5 chrII:197279-197855 1.2e-12 13_[+1]_58 chrXVI:880095-880555 1.2e-12 28_[-1]_43 chrV:443050-443363 1.2e-12 53_[-1]_18 chrXII:1051905-1052230 1.2e-12 61_[-1]_10 chrIV:667775-668262 1.2e-12 46_[-1]_25 chrXIV:631596-632122 1.6e-12 44_[-1]_27 chrIV:1016963-1017501 2.2e-12 32_[-1]_39 chrVII:401408-401620 2.2e-12 70_[-1]_1 chrV:354695-355340 2.2e-12 1_[+1]_70 chrIX:197372-197852 2.2e-12 64_[+1]_7 chrIX:370226-370672 2.2e-12 52_[+1]_19 chrXIII:290575-291119 2.2e-12 38_[+1]_33 chrIII:82235-82662 2.2e-12 71_[-1] chrIII:151047-151523 9e-12 56_[-1]_15 chrX:414770-414870 9e-12 41_[+1]_30 chrXIII:480383-480832 9e-12 71_[-1] chrIX:299998-300480 9e-12 46_[-1]_25 chrXVI:581838-582323 9e-12 67_[+1]_4 chrXV:281989-282402 2.8e-11 52_[+1]_19 chrXIII:747654-748144 3.7e-11 50_[-1]_21 chrXIII:131613-132100 3.7e-11 26_[-1]_45 chrVII:828475-828983 3.7e-11 51_[-1]_20 chrX:374176-374276 3.7e-11 39_[-1]_32 chrXI:162297-162752 3.7e-11 20_[-1]_51 chrXV:300881-301462 7.1e-11 40_[+1]_31 chrXIII:195928-196302 7.1e-11 10_[-1]_61 chrXV:464280-464739 7.1e-11 55_[+1]_16 chrXII:92400-92867 7.1e-11 30_[+1]_41 chrIV:1075294-1075765 1.5e-10 [-1]_71 chrIV:802555-803002 1.9e-10 10_[-1]_61 chrVIII:134104-134654 1.9e-10 26_[+1]_45 chrXV:663486-664117 2.7e-10 68_[-1]_3 chrXIII:372194-372668 2.7e-10 71_[-1] chrX:378213-378313 2.7e-10 45_[+1]_26 chrVII:412037-412580 2.7e-10 43_[-1]_28 chrXIII:586354-586899 2.7e-10 67_[-1]_4 chrV:469265-469696 2.7e-10 63_[+1]_8 chrV:492193-492565 3.4e-10 30_[-1]_41 chrXII:374193-374671 3.4e-10 8_[+1]_63 chrXI:578695-579375 3.4e-10 38_[+1]_33 chrIV:619698-620263 3.4e-10 46_[-1]_25 chrXIV:104596-105043 6e-10 71_[+1] chrII:266189-266653 6e-10 42_[+1]_29 chrXI:219724-220120 7.4e-10 58_[+1]_13 chrXVI:856731-857167 7.4e-10 38_[+1]_33 chrXI:517789-518285 7.4e-10 36_[+1]_35 chrVII:774095-774688 7.4e-10 43_[+1]_28 chrXIII:379026-379595 1e-09 50_[-1]_21 chrVII:287144-287665 1e-09 3_[-1]_68 chrXI:302709-303242 1e-09 61_[+1]_10 chrX:415714-415814 1e-09 16_[-1]_55 chrXIII:808013-808530 1.7e-09 32_[-1]_39 chrXIV:96039-96472 2.8e-09 43_[-1]_28 chrVIII:358285-358758 4.1e-09 14_[-1]_57 chrXIII:352093-352634 4.1e-09 20_[+1]_51 chrVI:210317-210907 5e-09 64_[-1]_7 chrIV:946145-946617 5e-09 32_[+1]_39 chrXIII:837749-838231 5e-09 39_[+1]_32 chrXIII:572698-573170 6e-09 6_[-1]_65 chrIV:1256793-1257283 8.6e-09 27_[-1]_44 chrXII:975780-976202 9.3e-09 49_[-1]_22 chrVII:730963-731455 9.3e-09 14_[+1]_57 chrXI:74385-74988 9.3e-09 24_[+1]_47 chrXVI:435649-436207 1.2e-08 22_[-1]_49 chrII:642822-643247 1.2e-08 30_[-1]_41 chrXVI:775571-776063 1.2e-08 5_[-1]_66 chrIX:336100-336610 2.2e-08 51_[-1]_20 chrII:405680-406266 2.2e-08 71_[+1] chrVII:544407-544847 2.2e-08 7_[-1]_64 chrX:355191-355291 2.2e-08 3_[+1]_68 chrXIII:463325-463882 2.2e-08 35_[+1]_36 chrXIV:725905-726393 2.8e-08 31_[+1]_40 chrX:424245-424345 2.8e-08 [+1]_71 chrII:9450-9876 2.8e-08 27_[-1]_44 chrIV:519651-519974 3.2e-08 38_[-1]_33 chrXVI:744074-744576 6e-08 43_[+1]_28 chrIII:149728-150197 8.6e-08 42_[+1]_29 chrVII:483297-483705 4.1e-07 26_[+1]_45 chrVIII:379294-380238 6.2e-07 12_[-1]_59 chrIV:488416-489142 8.7e-07 64_[+1]_7 chrXVI:828831-829440 1.2e-06 65_[+1]_6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCRDRRGRTCCBSGGTTCGATYCCSVK MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAYCRDRRGRTCCBSGGTTCGATYCCSVK width=29 seqs=82 chrXIV:602077-602588 ( 67) AACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrII:197279-197855 ( 14) AACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrXVI:880095-880555 ( 29) AACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrV:443050-443363 ( 54) AACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrXII:1051905-1052230 ( 62) AACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrIV:667775-668262 ( 47) AACGCGGGGATCAGCGGTTCGATCCCGCT 1 chrXIV:631596-632122 ( 45) GTGCGGGAGGTCCCGGGTTCGAGTCCCGG 1 chrIV:1016963-1017501 ( 33) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrVII:401408-401620 ( 71) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrV:354695-355340 ( 2) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrIX:197372-197852 ( 65) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrIX:370226-370672 ( 53) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrXIII:290575-291119 ( 39) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrIII:82235-82662 ( 72) CACCGTGGAGACCGGGGTTCGACTCCCCG 1 chrIII:151047-151523 ( 57) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrX:414770-414870 ( 42) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrXIII:480383-480832 ( 72) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrIX:299998-300480 ( 47) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrXVI:581838-582323 ( 68) AATCATAAGGTTAGGGGTTCGAGCCCCCT 1 chrXV:281989-282402 ( 53) CATCGTTGGGCCCCCGGTTCGATTCCGGG 1 chrXIII:747654-748144 ( 51) AATCAGAAGATTATGGGTTCGACCCCCAT 1 chrXIII:131613-132100 ( 27) AATCAGAAGATTATGGGTTCGACCCCCAT 1 chrVII:828475-828983 ( 52) AATCAGAAGATTATGGGTTCGACCCCCAT 1 chrX:374176-374276 ( 40) AATCAGAAGATTATGGGTTCGACCCCCAT 1 chrXI:162297-162752 ( 21) AATCAGAAGATTATGGGTTCGACCCCCAT 1 chrXV:300881-301462 ( 41) ATGCGAGAGGCCCTGGGTTCAATTCCCAG 1 chrXIII:195928-196302 ( 11) ATGCGAGAGGCCCTGGGTTCAATTCCCAG 1 chrXV:464280-464739 ( 56) ATGCGAGAGGCCCTGGGTTCAATTCCCAG 1 chrXII:92400-92867 ( 31) ATGCGAGAGGCCCTGGGTTCAATTCCCAG 1 chrIV:1075294-1075765 ( 1) ACGGCAAAGGTCCCGAGTTCGATCCTCGG 1 chrIV:802555-803002 ( 11) GATCCGGACAACCCCGGTTCGAATCCGGG 1 chrVIII:134104-134654 ( 27) GATCCGGACAACCCCGGTTCGAATCCGGG 1 chrXV:663486-664117 ( 69) ACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrXIII:372194-372668 ( 72) ACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrX:378213-378313 ( 46) ACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrVII:412037-412580 ( 44) ACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrXIII:586354-586899 ( 68) ACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrV:469265-469696 ( 64) ACGCAGAACGTCCCCAGTTCGATCCTGGG 1 chrV:492193-492565 ( 31) AACCAGAAGATTCCAGGTTCAAGTCCTGG 1 chrXII:374193-374671 ( 9) AACCAGAAGATTCCAGGTTCAAGTCCTGG 1 chrXI:578695-579375 ( 39) TACCGAAATGTCAGGGGTTCGAGCCCCCT 1 chrIV:619698-620263 ( 47) AACCAGAAGATTCCAGGTTCAAGTCCTGG 1 chrXIV:104596-105043 ( 72) AATGTGGAGATCATCGGTTCAAATCCGAT 1 chrII:266189-266653 ( 43) AATGTGGAGATCATCGGTTCAAATCCGAT 1 chrXI:219724-220120 ( 59) ATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrXVI:856731-857167 ( 39) ATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrXI:517789-518285 ( 37) ATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrVII:774095-774688 ( 44) ATGGGAGAGGTCTCCGGTTCGATTCCGGA 1 chrXIII:379026-379595 ( 51) AATCGAAGGGTTGCAGGTTCAATTCCTGT 1 chrVII:287144-287665 ( 4) AATCGAAGGGTTGCAGGTTCAATTCCTGT 1 chrXI:302709-303242 ( 62) AATCGAAGGGTTGCAGGTTCAATTCCTGT 1 chrX:415714-415814 ( 17) AATCGAAGGGTTGCAGGTTCAATTCCTGT 1 chrXIII:808013-808530 ( 33) GATCCGAACAACCCCAGTTCGAATCCGGG 1 chrXIV:96039-96472 ( 44) CAAGGTGGGGACACGGGTTCGATTCTCGT 1 chrVIII:358285-358758 ( 15) TATCTGGAGGTCCTGTGTTCGATCCACAG 1 chrXIII:352093-352634 ( 21) TATCTGGAGGTCCTGTGTTCGATCCACAG 1 chrVI:210317-210907 ( 65) AATCTTGAGATCGGGCGTTCGACTCGCCC 1 chrIV:946145-946617 ( 33) AATCTTGAGATCGGGCGTTCGACTCGCCC 1 chrXIII:837749-838231 ( 40) AATCTTGAGATCGGGCGTTCGACTCGCCC 1 chrXIII:572698-573170 ( 7) AATCTGAAGGTCGAGAGTTCGAACCTCCC 1 chrIV:1256793-1257283 ( 28) CAAGCATGGGGCCCGGGTTCGATTCCCGG 1 chrXII:975780-976202 ( 50) AATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrVII:730963-731455 ( 15) AATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrXI:74385-74988 ( 25) AATCGCAAGATCGTGAGTTCAACCCTCAC 1 chrXVI:435649-436207 ( 23) AATCTGTTGGTCCTTAGTTCGATCCTGAG 1 chrII:642822-643247 ( 31) AATCTGTTGGTCCTTAGTTCGATCCTGAG 1 chrXVI:775571-776063 ( 6) AATCTGTTGGTCCTTAGTTCGATCCTGAG 1 chrIX:336100-336610 ( 52) CGCGTGCCAGATCGGGGTTCAATTCCCCG 1 chrII:405680-406266 ( 72) CGCGTGCCAGATCGGGGTTCAATTCCCCG 1 chrVII:544407-544847 ( 8) CGCGTGCCAGATCGGGGTTCAATTCCCCG 1 chrX:355191-355291 ( 4) CGCGTGCCAGATCGGGGTTCAATTCCCCG 1 chrXIII:463325-463882 ( 36) CGCGTGCCAGATCGGGGTTCAATTCCCCG 1 chrXIV:725905-726393 ( 32) TACTGAAGGATGCGAGGTTCGAACTCGCG 1 chrX:424245-424345 ( 1) TACTGAAGGATGCGAGGTTCGAACTCGCG 1 chrII:9450-9876 ( 28) TACTGAAGGATGCGAGGTTCGAACTCGCG 1 chrIV:519651-519974 ( 39) TATTGAAGGATGCGAGGTTCGAACTCGCG 1 chrXVI:744074-744576 ( 44) AATGCAAAGGTCGTTAGTTCAATTCTGAC 1 chrIII:149728-150197 ( 43) AACCCTGATGTCCTCGGATCGAAACCGAG 1 chrVII:483297-483705 ( 27) TATCGCCGGATCTCCGCTTCGAGACCGGG 1 chrVIII:379294-380238 ( 13) ATTTGAGGGATCTGAAGATCAAGTCCGCC 1 chrIV:488416-489142 ( 65) TTCTGATCCAACCGAGGTTCGAACTCGGG 1 chrXVI:828831-829440 ( 66) AATTCTGTCACTAGGGGTCCGAATCTCGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCRDRRGRTCCBSGGTTCGATYCCSVK MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43200 bayes= 11.1053 E= 6.4e-312 112 -11 -201 -147 125 -120 -169 -118 -363 74 -1 57 -1300 174 38 -183 -39 -20 103 -64 -18 -201 120 -39 49 -143 112 -205 89 -143 69 -263 -105 -55 182 -363 41 -1300 160 -1300 -55 -143 -401 122 -1300 177 -201 -11 -24 141 -43 -205 -463 69 108 -24 -94 57 135 -263 -55 -243 189 -363 -1300 -401 233 -1300 -363 -1300 -1300 169 -1300 -401 -1300 170 -1300 235 -1300 -1300 -11 -1300 187 -1300 172 -1300 -1300 -1300 -94 16 -43 65 -363 124 -1300 76 -1300 225 -1300 -231 -363 189 -243 -55 -1300 135 108 -183 -24 103 79 -1300 -263 -84 148 -5 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCRDRRGRTCCBSGGTTCGATYCCSVK MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 82 E= 6.4e-312 0.658537 0.182927 0.048780 0.109756 0.719512 0.085366 0.060976 0.134146 0.024390 0.329268 0.195122 0.451220 0.000000 0.658537 0.256098 0.085366 0.231707 0.170732 0.402439 0.195122 0.268293 0.048780 0.451220 0.231707 0.426829 0.073171 0.426829 0.073171 0.560976 0.073171 0.317073 0.048780 0.146341 0.134146 0.695122 0.024390 0.402439 0.000000 0.597561 0.000000 0.207317 0.073171 0.012195 0.707317 0.000000 0.670732 0.048780 0.280488 0.256098 0.524390 0.146341 0.073171 0.012195 0.317073 0.414634 0.256098 0.158537 0.292683 0.500000 0.048780 0.207317 0.036585 0.731707 0.024390 0.000000 0.012195 0.987805 0.000000 0.024390 0.000000 0.000000 0.975610 0.000000 0.012195 0.000000 0.987805 0.000000 1.000000 0.000000 0.000000 0.280488 0.000000 0.719512 0.000000 1.000000 0.000000 0.000000 0.000000 0.158537 0.219512 0.146341 0.475610 0.024390 0.463415 0.000000 0.512195 0.000000 0.939024 0.000000 0.060976 0.024390 0.731707 0.036585 0.207317 0.000000 0.500000 0.414634 0.085366 0.256098 0.402439 0.341463 0.000000 0.048780 0.109756 0.548780 0.292683 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAYCRDRRGRTCCBSGGTTCGATYCCSVK MEME-1 regular expression -------------------------------------------------------------------------------- AA[TC][CG][GA][GAT][AG][AG]G[GA][TA][CT][CA][GCT][GC][GA]GTTC[GA]A[TC][TC]C[CT][CG][CGA][GT] -------------------------------------------------------------------------------- Time 353.28 secs. ******************************************************************************** ******************************************************************************** MOTIF GSBYNYKTGGCSHAGTGGKTW MEME-2 width = 21 sites = 59 llr = 841 E-value = 1.4e-098 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSBYNYKTGGCSHAGTGGKTW MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::1212:2:::2a1::::36 pos.-specific C 144434::::853:::2::1: probability G 8431324:8a:32:9:6a511 matrix T 1133244a::223::a3:563 bits 2.3 * * 2.1 * * 1.9 * * 1.6 * * ** * Relative 1.4 * **** *** * Entropy 1.2 * **** *** * (20.6 bits) 0.9 * **** *** * 0.7 ** ***** ****** 0.5 *** ****** ****** * 0.2 ************ ******** 0.0 --------------------- Multilevel GGCCCTGTGGCCCAGTGGTTA consensus CTTGCT A TGT T GAT sequence G T A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCSHAGTGGKTW MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXI:219724-220120 + 23 4.41e-10 ACAGTAAATA GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrXII:656822-657200 - 25 4.41e-10 CAAGAAAATT GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrXVI:856731-857167 + 3 4.41e-10 TC GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrXI:517789-518285 + 1 4.41e-10 . GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrVII:774095-774688 + 8 4.41e-10 ATTAATT GGGCGTGTGGCGTAGTCGGTA GCGCGCTCCC chrXIV:602077-602588 + 30 1.16e-09 AGATAACAAT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrXVI:880095-880555 - 74 1.16e-09 TATAAT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrXII:734591-735006 + 54 1.16e-09 AACAAAGTTT GGTCTCTTGGCCCAGTTGGTT AAGGCACCGT chrXI:46601-47000 - 36 2.32e-09 AAATTACTCA GCCCTTTTGGCCAAGTGGTAA GGCATCGCAC chrIV:1150697-1151168 - 39 4.42e-09 AAGTGTTTCA GTCCCAGTGGCCGAGTGGTTA AGGCGATGCC chrXII:167750-168246 - 57 5.98e-09 ATAGTCATAT GGCAACTTGGCCGAGTGGTTA AGGCGAAAGA chrX:523761-523861 - 50 5.98e-09 AGAGATTAAA GGCAACTTGGCCGAGTGGTTA AGGCGAAAGA chrIV:1305399-1305841 + 60 5.98e-09 TACAAATTAA GGCAACTTGGCCGAGTGGTTA AGGCGAAAGA chrI:138972-139369 + 32 6.92e-09 CAATTAGTAC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrXIV:546536-547667 + 43 6.92e-09 CGAAATAATC GGGCGTGTGGTCTAGTGGTAT GATTCTCGCT chrX:617713-617813 + 31 8.00e-09 AACAAACAAT GGGAGTTTGGCCGAGTGGTTT AAGGCGTCAG chrXII:592336-592825 - 69 8.00e-09 AACATACAAT GGGAGTTTGGCCGAGTGGTTT AAGGCGTCAG chrXVI:435649-436207 - 66 1.39e-08 TACAACAAAA GCTCGTATGGCGCAGTGGTAG CGCAGCAGAT chrXIV:104596-105043 + 36 1.39e-08 CAAGTTCTCA GCTTCTATGGCCAAGTTGGTA AGGCGCCACA chrII:642822-643247 - 74 1.39e-08 TAGAAA GCTCGTATGGCGCAGTGGTAG CGCAGCAGAT chrXVI:775571-776063 - 49 1.39e-08 TAATTCAAAA GCTCGTATGGCGCAGTGGTAG CGCAGCAGAT chrII:266189-266653 + 7 1.39e-08 AAAACT GCTTCTATGGCCAAGTTGGTA AGGCGCCACA chrXIV:560612-560912 - 33 1.39e-08 GTAATAACGG GCTTCTATGGCCAAGTTGGTA AGGCGCCACA chrX:378213-378313 + 9 3.38e-08 AATTAATA GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrV:469265-469696 + 27 3.38e-08 AGAAATAATT GGTTTCGTGGTCTAGTCGGTT ATGGCATCTG chrXV:594212-594648 - 25 6.73e-08 TGATTGAAAC GCGCAAGTGGTTCAGTGGTTA GAATTTATGC chrIV:802555-803002 - 54 9.30e-08 ATGAATTGTC GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrXIII:808013-808530 - 76 9.30e-08 AAAA GGTCCTATAGTGTAGTGGTTA TCACTTTCGG chrVIII:34386-36380 - 48 1.15e-07 CGAAGACGAA GCTGCTTTGGCTAAGTTGGTT TCTACCATTG chrXVI:744074-744576 + 9 1.27e-07 GTGTAAAA GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrVII:661533-661987 + 39 1.27e-07 GTAAAAATTT GCCTCCTTAGCTTAGTGGTAG AGCGTTGCAC chrX:414770-414870 + 6 1.40e-07 AATTA GCCTTGTTGGCGCAATCGGTA GCGCGTATGA chrXVI:581838-582323 + 32 1.40e-07 CAACAAAAGA GCCTTGTTGGCGCAATCGGTA GCGCGTATGA chrXIII:131613-132100 - 70 1.89e-07 AAGAAATTTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrXI:162297-162752 - 64 1.89e-07 ACAAATATTA GCTCGCGTGGCGTAATGGCAA CGCGTCTGAC chrXV:228105-228561 + 48 2.08e-07 TAAAATATTA GACTCCATGGCCAAGTTGGTT AAGGCGTGCG chrIII:127533-127907 + 46 2.08e-07 AAGATAAAAT GACTCCATGGCCAAGTTGGTT AAGGCGTGCG chrXV:281989-282402 + 19 2.29e-07 ACATGAAAGC GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrX:396591-396691 - 28 2.29e-07 TCAAAAGTAA GCGCAAGTGGTTTAGTGGTAA AATCCAACGT chrII:350622-351052 + 40 3.31e-07 TCAATAAAAG GGTTTTATAGTGTAGTGGTTA TCACTTTCGG chrIV:1256793-1257283 - 71 3.62e-07 ATCTTCTTA GCGAAAGTGGTTCAGTGGTTA GAATTCATGC chrX:424245-424345 - 67 4.70e-07 TAAATAAGAT GGAGGGTTGGCCGAGTGGTCT AAGGCGGCAG chrXII:962829-963284 - 29 4.70e-07 TATTATCGAC GGAGGGTTGGCCGAGTGGTCT AAGGCGGCAG chrVII:422882-423393 + 5 6.06e-07 AAGT GGTTGTTTGGCCGAGCGGTCT AAGGCGCCTG chrV:492193-492565 - 75 9.08e-07 TCCTA TTCCTCGTGGCCCAATGGTCA CGGCGTCTGG chrXV:340143-340586 - 37 9.08e-07 TCAAGATCTG TTCCTCGTGGCCCAATGGTCA CGGCGTCTGG chrX:233731-233831 + 42 9.08e-07 TATATTCTTG TTCCTCGTGGCCCAATGGTCA CGGCGTCTGG chrXIV:374652-375135 + 26 1.06e-06 AGAAAAATAA GCGGACTTAGCTCAGTTGGGA GAGCGCCAGA chrXV:287783-288560 + 71 1.33e-06 AAAATAGCTT CTCTCGGTAGCCAAGTTGGTT TAAGGCGCA chrX:354043-354143 + 39 1.33e-06 TCATTTATCA CTCTCGGTAGCCAAGTTGGTT TAAGGCGCAA chrVI:167243-167686 + 23 1.33e-06 ACAAAAATGA CTCTCGGTAGCCAAGTTGGTT TAAGGCGCAA chrX:542774-542874 - 58 1.33e-06 CAATTAAATA CTCTCGGTAGCCAAGTTGGTT TAAGGCGCAA chrIV:359361-359795 + 49 1.33e-06 GAAGAACTCA TCCTTGTTAGCTCAGTTGGTA GAGCGTTCGG chrVIII:358285-358758 - 78 1.43e-06 AA GCGGATTTAGCTCAGTTGGGA GAGCGCCAGA chrX:517642-517742 - 5 2.04e-06 ATAAAAGTTA AGCGCCGTGGCGCAGTGGAAG CGCG chrIII:149728-150197 + 8 2.04e-06 AATGTTG AGCGCCGTGGCGCAGTGGAAG CGCGCAGGGC chrXIII:572698-573170 - 51 2.19e-06 ATAACAGATA GCTTCAGTAGCTCAGTAGGAA GAGCGTCAGT chrVIII:62559-62921 + 65 2.86e-06 AAAATCATAT GCCATCTTAGTATAGTGGTTA GTACACATCG chrIX:175385-175628 + 42 5.02e-06 GGAGGAGCAG GCGCGATTGGTGAAGAGGGGA CGTTGTAGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCSHAGTGGKTW MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXI:219724-220120 4.4e-10 22_[+2]_57 chrXII:656822-657200 4.4e-10 24_[-2]_55 chrXVI:856731-857167 4.4e-10 2_[+2]_77 chrXI:517789-518285 4.4e-10 [+2]_79 chrVII:774095-774688 4.4e-10 7_[+2]_72 chrXIV:602077-602588 1.2e-09 29_[+2]_50 chrXVI:880095-880555 1.2e-09 73_[-2]_6 chrXII:734591-735006 1.2e-09 53_[+2]_26 chrXI:46601-47000 2.3e-09 35_[-2]_44 chrIV:1150697-1151168 4.4e-09 38_[-2]_41 chrXII:167750-168246 6e-09 56_[-2]_23 chrX:523761-523861 6e-09 49_[-2]_30 chrIV:1305399-1305841 6e-09 59_[+2]_20 chrI:138972-139369 6.9e-09 31_[+2]_48 chrXIV:546536-547667 6.9e-09 42_[+2]_37 chrX:617713-617813 8e-09 30_[+2]_49 chrXII:592336-592825 8e-09 68_[-2]_11 chrXVI:435649-436207 1.4e-08 65_[-2]_14 chrXIV:104596-105043 1.4e-08 35_[+2]_44 chrII:642822-643247 1.4e-08 73_[-2]_6 chrXVI:775571-776063 1.4e-08 48_[-2]_31 chrII:266189-266653 1.4e-08 6_[+2]_73 chrXIV:560612-560912 1.4e-08 32_[-2]_47 chrX:378213-378313 3.4e-08 8_[+2]_71 chrV:469265-469696 3.4e-08 26_[+2]_53 chrXV:594212-594648 6.7e-08 24_[-2]_55 chrIV:802555-803002 9.3e-08 53_[-2]_26 chrXIII:808013-808530 9.3e-08 75_[-2]_4 chrVIII:34386-36380 1.1e-07 47_[-2]_32 chrXVI:744074-744576 1.3e-07 8_[+2]_71 chrVII:661533-661987 1.3e-07 38_[+2]_41 chrX:414770-414870 1.4e-07 5_[+2]_74 chrXVI:581838-582323 1.4e-07 31_[+2]_48 chrXIII:131613-132100 1.9e-07 69_[-2]_10 chrXI:162297-162752 1.9e-07 63_[-2]_16 chrXV:228105-228561 2.1e-07 47_[+2]_32 chrIII:127533-127907 2.1e-07 45_[+2]_34 chrXV:281989-282402 2.3e-07 18_[+2]_61 chrX:396591-396691 2.3e-07 27_[-2]_52 chrII:350622-351052 3.3e-07 39_[+2]_40 chrIV:1256793-1257283 3.6e-07 70_[-2]_9 chrX:424245-424345 4.7e-07 66_[-2]_13 chrXII:962829-963284 4.7e-07 28_[-2]_51 chrVII:422882-423393 6.1e-07 4_[+2]_75 chrV:492193-492565 9.1e-07 74_[-2]_5 chrXV:340143-340586 9.1e-07 36_[-2]_43 chrX:233731-233831 9.1e-07 41_[+2]_38 chrXIV:374652-375135 1.1e-06 25_[+2]_54 chrXV:287783-288560 1.3e-06 70_[+2]_9 chrX:354043-354143 1.3e-06 38_[+2]_41 chrVI:167243-167686 1.3e-06 22_[+2]_57 chrX:542774-542874 1.3e-06 57_[-2]_22 chrIV:359361-359795 1.3e-06 48_[+2]_31 chrVIII:358285-358758 1.4e-06 77_[-2]_2 chrX:517642-517742 2e-06 4_[-2]_75 chrIII:149728-150197 2e-06 7_[+2]_72 chrXIII:572698-573170 2.2e-06 50_[-2]_29 chrVIII:62559-62921 2.9e-06 64_[+2]_15 chrIX:175385-175628 5e-06 41_[+2]_38 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCSHAGTGGKTW MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSBYNYKTGGCSHAGTGGKTW width=21 seqs=59 chrXI:219724-220120 ( 23) GGGCGTGTGGCGTAGTCGGTA 1 chrXII:656822-657200 ( 25) GGGCGTGTGGCGTAGTCGGTA 1 chrXVI:856731-857167 ( 3) GGGCGTGTGGCGTAGTCGGTA 1 chrXI:517789-518285 ( 1) GGGCGTGTGGCGTAGTCGGTA 1 chrVII:774095-774688 ( 8) GGGCGTGTGGCGTAGTCGGTA 1 chrXIV:602077-602588 ( 30) GGTCTCTTGGCCCAGTTGGTT 1 chrXVI:880095-880555 ( 74) GGTCTCTTGGCCCAGTTGGTT 1 chrXII:734591-735006 ( 54) GGTCTCTTGGCCCAGTTGGTT 1 chrXI:46601-47000 ( 36) GCCCTTTTGGCCAAGTGGTAA 1 chrIV:1150697-1151168 ( 39) GTCCCAGTGGCCGAGTGGTTA 1 chrXII:167750-168246 ( 57) GGCAACTTGGCCGAGTGGTTA 1 chrX:523761-523861 ( 50) GGCAACTTGGCCGAGTGGTTA 1 chrIV:1305399-1305841 ( 60) GGCAACTTGGCCGAGTGGTTA 1 chrI:138972-139369 ( 32) GGGCGTGTGGTCTAGTGGTAT 1 chrXIV:546536-547667 ( 43) GGGCGTGTGGTCTAGTGGTAT 1 chrX:617713-617813 ( 31) GGGAGTTTGGCCGAGTGGTTT 1 chrXII:592336-592825 ( 69) GGGAGTTTGGCCGAGTGGTTT 1 chrXVI:435649-436207 ( 66) GCTCGTATGGCGCAGTGGTAG 1 chrXIV:104596-105043 ( 36) GCTTCTATGGCCAAGTTGGTA 1 chrII:642822-643247 ( 74) GCTCGTATGGCGCAGTGGTAG 1 chrXVI:775571-776063 ( 49) GCTCGTATGGCGCAGTGGTAG 1 chrII:266189-266653 ( 7) GCTTCTATGGCCAAGTTGGTA 1 chrXIV:560612-560912 ( 33) GCTTCTATGGCCAAGTTGGTA 1 chrX:378213-378313 ( 9) GGTTTCGTGGTCTAGTCGGTT 1 chrV:469265-469696 ( 27) GGTTTCGTGGTCTAGTCGGTT 1 chrXV:594212-594648 ( 25) GCGCAAGTGGTTCAGTGGTTA 1 chrIV:802555-803002 ( 54) GGTCCTATAGTGTAGTGGTTA 1 chrXIII:808013-808530 ( 76) GGTCCTATAGTGTAGTGGTTA 1 chrVIII:34386-36380 ( 48) GCTGCTTTGGCTAAGTTGGTT 1 chrXVI:744074-744576 ( 9) GCCTCCTTAGCTTAGTGGTAG 1 chrVII:661533-661987 ( 39) GCCTCCTTAGCTTAGTGGTAG 1 chrX:414770-414870 ( 6) GCCTTGTTGGCGCAATCGGTA 1 chrXVI:581838-582323 ( 32) GCCTTGTTGGCGCAATCGGTA 1 chrXIII:131613-132100 ( 70) GCTCGCGTGGCGTAATGGCAA 1 chrXI:162297-162752 ( 64) GCTCGCGTGGCGTAATGGCAA 1 chrXV:228105-228561 ( 48) GACTCCATGGCCAAGTTGGTT 1 chrIII:127533-127907 ( 46) GACTCCATGGCCAAGTTGGTT 1 chrXV:281989-282402 ( 19) GCGCAAGTGGTTTAGTGGTAA 1 chrX:396591-396691 ( 28) GCGCAAGTGGTTTAGTGGTAA 1 chrII:350622-351052 ( 40) GGTTTTATAGTGTAGTGGTTA 1 chrIV:1256793-1257283 ( 71) GCGAAAGTGGTTCAGTGGTTA 1 chrX:424245-424345 ( 67) GGAGGGTTGGCCGAGTGGTCT 1 chrXII:962829-963284 ( 29) GGAGGGTTGGCCGAGTGGTCT 1 chrVII:422882-423393 ( 5) GGTTGTTTGGCCGAGCGGTCT 1 chrV:492193-492565 ( 75) TTCCTCGTGGCCCAATGGTCA 1 chrXV:340143-340586 ( 37) TTCCTCGTGGCCCAATGGTCA 1 chrX:233731-233831 ( 42) TTCCTCGTGGCCCAATGGTCA 1 chrXIV:374652-375135 ( 26) GCGGACTTAGCTCAGTTGGGA 1 chrXV:287783-288560 ( 71) CTCTCGGTAGCCAAGTTGGTT 1 chrX:354043-354143 ( 39) CTCTCGGTAGCCAAGTTGGTT 1 chrVI:167243-167686 ( 23) CTCTCGGTAGCCAAGTTGGTT 1 chrX:542774-542874 ( 58) CTCTCGGTAGCCAAGTTGGTT 1 chrIV:359361-359795 ( 49) TCCTTGTTAGCTCAGTTGGTA 1 chrVIII:358285-358758 ( 78) GCGGATTTAGCTCAGTTGGGA 1 chrX:517642-517742 ( 5) AGCGCCGTGGCGCAGTGGAAG 1 chrIII:149728-150197 ( 8) AGCGCCGTGGCGCAGTGGAAG 1 chrXIII:572698-573170 ( 51) GCTTCAGTAGCTCAGTAGGAA 1 chrVIII:62559-62921 ( 65) GCCATCTTAGTATAGTGGTTA 1 chrIX:175385-175628 ( 42) GCGCGATTGGTGAAGAGGGGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCSHAGTGGKTW MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 10.3247 E= 1.4e-098 -316 -154 208 -216 -316 105 111 -116 -316 92 46 9 -135 116 -73 9 -99 63 63 -35 -135 85 -37 30 -70 -1253 116 30 -1253 -1253 -1253 172 -35 -1253 195 -1253 -1253 -1253 235 -1253 -1253 199 -1253 -46 -416 132 63 -70 -58 71 -37 9 172 -1253 -1253 -1253 -135 -1253 216 -1253 -416 -353 -1253 167 -416 -37 151 -16 -1253 -1253 235 -1253 -316 -254 122 65 -25 -95 -195 97 88 -1253 -73 9 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCSHAGTGGKTW MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 59 E= 1.4e-098 0.033898 0.067797 0.830508 0.067797 0.033898 0.406780 0.423729 0.135593 0.033898 0.372881 0.271186 0.322034 0.118644 0.440678 0.118644 0.322034 0.152542 0.305085 0.305085 0.237288 0.118644 0.355932 0.152542 0.372881 0.186441 0.000000 0.440678 0.372881 0.000000 0.000000 0.000000 1.000000 0.237288 0.000000 0.762712 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.779661 0.000000 0.220339 0.016949 0.491525 0.305085 0.186441 0.203390 0.322034 0.152542 0.322034 1.000000 0.000000 0.000000 0.000000 0.118644 0.000000 0.881356 0.000000 0.016949 0.016949 0.000000 0.966102 0.016949 0.152542 0.559322 0.271186 0.000000 0.000000 1.000000 0.000000 0.033898 0.033898 0.457627 0.474576 0.254237 0.101695 0.050847 0.593220 0.559322 0.000000 0.118644 0.322034 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSBYNYKTGGCSHAGTGGKTW MEME-2 regular expression -------------------------------------------------------------------------------- G[GC][CTG][CT][CGT][TC][GT]T[GA]G[CT][CG][CTA]AGT[GT]G[TG][TA][AT] -------------------------------------------------------------------------------- Time 782.70 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTTTTTTTTTTTC MEME-3 width = 14 sites = 90 llr = 917 E-value = 7.5e-047 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTTTTTTTTTTTC MEME-3 Description -------------------------------------------------------------------------------- Simplified A 22:1:21:3::::: pos.-specific C :121:1:1:21::5 probability G ::::::::::::12 matrix T 8889a799789992 bits 2.3 2.1 1.9 1.6 * Relative 1.4 * ** Entropy 1.2 ** ** **** (14.7 bits) 0.9 *** ******* 0.7 ************* 0.5 ************** 0.2 ************** 0.0 -------------- Multilevel TTTTTTTTTTTTTC consensus AC T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTTTTTTTC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------- chrXIV:88950-89724 + 38 3.57e-08 TTTATTTTCT TTTTTTTTTTTTTC TCACATCTGT chrXIII:652042-652954 + 86 3.57e-08 CGCACATACC TTTTTTTTTTTTTC A chrXI:517789-518285 + 86 3.57e-08 TTAAAATTTC TTTTTTTTTTTTTC T chrVII:706896-707185 - 51 1.54e-07 GAAGATGTTC TTTTTTTTTTTTTG GGCCTCATTA chrXII:369643-371364 + 35 1.54e-07 TTGGCTTTTA TTTTTTTTTTTTTG GTGGCGTTTT chrII:36243-36797 + 35 1.54e-07 TTTGCTAGCA TTCTTTTTTTTTTC ATTTCTAGGC chrIX:248490-249429 + 36 2.09e-07 TTTTTTTATT TTTTTTTTTTTTTT ATCGCTTACT chrXVI:188324-189278 + 78 3.03e-07 ATTACTTACG ATTTTTTTTTTTTC GTTATGAAC chrVII:878323-879017 - 64 3.03e-07 TTATTATTTA ATTTTTTTTTTTTC GGAAAAAGAG chrXV:384637-385076 + 1 3.03e-07 . ATTTTTTTTTTTTC AGCGCCGTGG chrIV:1344614-1346010 - 57 3.03e-07 CAATTTTTTC TTTTTATTTTTTTC CAGTTTTTTC chrII:373162-373707 + 75 3.03e-07 GAAAGGTTTT TTTTTCTTTTTTTC CCTACCTGGC chrIV:83327-83949 + 39 3.27e-07 CAAGTTTAAT TTTTTTTCTTTTTC CACATTGTTT chrXVI:768631-769498 + 51 3.86e-07 ATGTAAGAAT TATTTTTTTTTTTC ATTCAATAAA chrVII:968574-969215 + 50 4.94e-07 TGCGAAGCTT TTTTTTTTTTCTTC ACAGTTTCTC chrXIV:725905-726393 - 17 5.88e-07 CCTTCAGTAT TTTTTTTTATTTTG TCGGGGCCAC chrXIV:715987-716607 + 8 5.88e-07 GTCCATC TTTTTTTTATTTTG AAGGCGTGTA chrXV:571688-572156 + 20 7.02e-07 GCTGCAACAT TTTTTTATTTTTTC AAATCATATG chrII:642822-643247 - 10 8.46e-07 GAGTGCGAGC TTCTTTTTTTTTTT GCAATCCTT chrIV:1013405-1013977 + 86 1.23e-06 ATAGTAAATT TTCTTCTTTTTTTC C chrIX:68252-68505 + 49 1.23e-06 AGATGTATGG TTTTTCTTTTTTTG TGCTCCGTGT chrXIII:320905-321326 - 67 1.23e-06 ACTCGTCCAT TTTTTATTTTTTTG GCTAACTAAC chrXII:808970-809552 - 45 1.50e-06 GACATGGTCT TTCTTTTCTTTTTC GTTAATATTT chrIV:1016963-1017501 - 9 2.22e-06 CTTCGGAGTT TCTTTTTTATTTTC TAGAAAAA chrVII:609310-610100 - 68 2.41e-06 CTTTTTTAGT TCCTTTTTTTTTTC TCCCTCGGTC chrII:477027-477785 - 15 2.41e-06 CGAAGAAGAA TTTTTTTTTTCTTG AGGCTTCTGT chrXIII:352093-352634 + 63 2.41e-06 TCGCATTAAT TTTTTTTTACTTTT CATTCGTTTT chrVII:648785-649365 - 62 2.82e-06 TTTCATCGCC TTCTTTTTATTTTT ATCCGAAGAT chrV:550857-551601 + 37 3.23e-06 GAAGACATCA TTTTTTATTTTTTT AAGCAGAACG chrIV:520675-521467 + 46 3.23e-06 ACCCTCTTGT TTTATTTTTCTTTC TTGGCTTTGA chrXVI:880095-880555 - 6 3.72e-06 TAGAGACCAT TTCTTTTCTCTTTC TTTTT chrIV:410167-410790 + 27 3.72e-06 TCGTCCAAAT TATTTTTTACTTTC CGCGGTGCCG chrIII:82235-82662 - 50 4.37e-06 CGTATCGGAG TTTTTTTTTTCTGC TATTACAATT chrIV:667775-668262 - 26 4.37e-06 GCTAGAGACC ATTTTTATTTTTTC TCCTCTATTG chrX:378213-378313 + 84 5.03e-06 GCGAAATCAA TTTTTTGTTTTTTT AAT chrX:531599-531699 + 10 5.03e-06 GCGCAGTTT CTTTTCTTTTTTTC TGGAAAATAA chrXIV:738807-740167 + 42 5.03e-06 TAGAAGAACG TTTTTTGTTTTTTT ATGCAAGACC chrXII:522161-522429 - 12 5.03e-06 TGTTAATATG GTTTTTTTTTTTTG ATATGAAAAC chrIII:151047-151523 + 22 5.54e-06 TGTAATGTAG TTTCTTTCTTTTTC CAAGAAAAAA chrXV:901432-901647 - 4 5.54e-06 TATCTTTGAA TTTTTATCTCTTTC AGG chrXII:1028194-1028600 + 81 6.23e-06 ATGGGTCATA ATTTTTTTTCTTGC CTTCAA chrVIII:455210-456016 + 76 6.23e-06 TCACTTCTGC TATCTTTTTTTTTC AAACATTGAT chrX:422710-422810 + 21 6.23e-06 CCTGGAGCAC ATTTTCTTTTTTTG TGAATTAAAC chrXII:92400-92867 + 71 6.23e-06 TCGCCCCTTT ATTTTCTTTTTTTG GACCCAAAGA chrVII:545132-546005 + 19 6.78e-06 TTTCCATGCA TCCTTTTTTCTTTC ATTCAATGAC chrVII:412037-412580 - 21 6.78e-06 GCGAAATCAA GTTTTATTTTTTTC TAATCAAAAA chrXII:975780-976202 - 28 7.52e-06 ACTGGGGTCG TTTATTTTTTTTGC ATTAAATTAT chrX:414770-414870 + 81 7.52e-06 ACAGGGCTAA TATTTTTTTCTTGC CCACTT chrIX:210659-210960 + 49 8.94e-06 TCCAACAATG TACTTTTTTTTTGC TTTGTACTGC chrIX:426863-427810 + 20 8.94e-06 AAACTTTTTG CCTTTTTTTTTTTC ACTGGTTTTC chrXIV:568051-568534 - 69 8.94e-06 ATTAATGCAT TTTTTTTTTTTATC TCCAGCATTA chrVII:986378-987774 + 80 9.69e-06 CGCAGCAGGG TTTTTTTTTTTGGC GAGCACA chrVIII:388668-389003 - 78 1.06e-05 TTTTTTCAC TTTTTTGTTCTTTG CAAGAACGCG chrV:167091-167614 - 76 1.06e-05 AAAGGGACTG TTTATTTTTCTTTG GAAGTAATAT chrXIII:837749-838231 + 78 1.06e-05 CCCGGGAGAT ATTTTTTTACTTTT GATTACCTT chrVII:774095-774688 + 82 1.06e-05 ACTCGTCCAA ATTTTTTTACTTTT AATGA chrXII:83934-84334 + 34 1.17e-05 TCTGATTTAG TATTTCTTTTTTGC CAGCCAGTAT chrXII:1051905-1052230 - 37 1.28e-05 GAGACCATTA TTTTTTTTACTTTA AGTAAATAAT chrXII:214626-215068 - 70 1.28e-05 TGCGTCCATT TATTTTTTACTTTT ATTCTCCTTT chrIV:1175743-1176093 + 53 1.43e-05 AGCACGGTAC TTTTTTTTATTCTC AGTAAATGAA chrVIII:400999-401331 - 24 1.43e-05 TCAGACCTGC TTTTTTTTTTCTGT AACCCTTTTA chrXII:447872-449052 - 34 1.43e-05 CCCCTAGTCT TTTTTAGTTCTTTC CGTTCGACCT chrXIII:253328-253740 + 43 1.56e-05 ACCTAGGTTA CTCTTTTCTTTTTC TGGGTGCGGG chrXIV:289343-290137 - 8 1.56e-05 ATCAAGTTAT TTTCTTTTATTTGC TTGGATT chrVII:401408-401620 - 7 1.74e-05 CCGTGAAGAA AATTTTTTTTCTTC ATTTCG chrV:288143-288767 - 24 1.74e-05 GCTGGTGTCG TTTTTTTTATTGTT AGAGGTGCCT chrII:44954-45378 - 7 1.93e-05 CTCATCGTTC TTCATTTCTTTTTC CTAATT chrIV:1278227-1279362 + 1 1.93e-05 . TACTTATTATTTTC AGGGTCGCTT chrXVI:404250-405903 + 44 1.93e-05 GCCTTTGTTG AATTTTTTTCTTTT CGTTTTGTTC chrXVI:585794-587663 - 79 2.11e-05 AAGGTTAT TTTTTATTATTGTC ATAGAAGTTG chrVII:555129-557493 + 24 2.11e-05 CTAACAAATT TTTTTATTATTTGT TTTCAATAGA chrVI:226402-226927 - 60 2.31e-05 CTACAGGGCT TATCTCTTTTTTTC TCTAACAAAA chrII:301112-302188 + 86 2.47e-05 GTTCCGCTCA ATTTTATCTTTTTG A chrX:90033-90133 + 83 2.67e-05 ATACATGGCC TTGTTTTTTTTTTA ACTG chrIV:117160-118201 - 53 2.67e-05 CTGTTGTCAG TCTTTATTATTTTG TTCATCTCAA chrXI:258095-259993 - 80 2.67e-05 TTTTTCG TTGTTTTTTTTTTA GAACGTTACA chrVIII:147719-148757 - 65 2.88e-05 TAATGATTTA TCCTTCTTTTTTTG GAGCACAAAT chrI:181131-181521 - 77 3.12e-05 GGACTTGAGT TTGTTTTTATCTTC AGAGTATATG chrIV:216578-218078 - 10 3.64e-05 AGCAGGGCCT CTTTTCATTTTTTC ATATAGTAG chrV:492193-492565 - 8 3.93e-05 GCGGGGAAGG ATTATTTTTCTTTT AATCAAC chrX:650861-650961 - 4 3.93e-05 TTGAGGTGTT ATTTTAATATTTTC ACC chrXI:578695-579375 + 76 3.93e-05 CTATGAGGAG TTCTTTACTTTTTT AGATTCGGCG chrVII:590733-591651 - 2 4.28e-05 ATATAACCTG GTTCTTTTTTTTTT T chrXI:74385-74988 + 66 5.03e-05 GGGTCGCTTA TTTTTAACTTTTTT ACACTGAAGA chrVIII:379294-380238 - 76 6.77e-05 ATTCATTACC TATTTATCATTTTT AGTTGGAATT chrVIII:381449-382534 - 15 7.73e-05 TGTTTATTGT TTTATTATATTTTT ATAGTTATAC chrXV:168120-168383 + 79 8.82e-05 CGTTAAACAA TTCTTATTATTTAC TAAAAACC chrIV:340265-341667 - 16 8.82e-05 CATAAGCTTA TATTTATTTCCTTT TAACTTCGAT chrX:196858-196958 - 84 9.43e-05 GTT ATTTTTTTATTTAT ACATTTTATA chrVII:533828-535191 - 21 1.08e-04 AGTATGTTTT TACTTTTTACTTTA TCATAGAACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTTTTTTTC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:88950-89724 3.6e-08 37_[+3]_49 chrXIII:652042-652954 3.6e-08 85_[+3]_1 chrXI:517789-518285 3.6e-08 85_[+3]_1 chrVII:706896-707185 1.5e-07 50_[-3]_36 chrXII:369643-371364 1.5e-07 34_[+3]_52 chrII:36243-36797 1.5e-07 34_[+3]_52 chrIX:248490-249429 2.1e-07 35_[+3]_51 chrXVI:188324-189278 3e-07 77_[+3]_9 chrVII:878323-879017 3e-07 63_[-3]_23 chrXV:384637-385076 3e-07 [+3]_86 chrIV:1344614-1346010 3e-07 56_[-3]_30 chrII:373162-373707 3e-07 74_[+3]_12 chrIV:83327-83949 3.3e-07 38_[+3]_48 chrXVI:768631-769498 3.9e-07 50_[+3]_36 chrVII:968574-969215 4.9e-07 49_[+3]_37 chrXIV:725905-726393 5.9e-07 16_[-3]_70 chrXIV:715987-716607 5.9e-07 7_[+3]_79 chrXV:571688-572156 7e-07 19_[+3]_67 chrII:642822-643247 8.5e-07 9_[-3]_77 chrIV:1013405-1013977 1.2e-06 85_[+3]_1 chrIX:68252-68505 1.2e-06 48_[+3]_38 chrXIII:320905-321326 1.2e-06 66_[-3]_20 chrXII:808970-809552 1.5e-06 44_[-3]_42 chrIV:1016963-1017501 2.2e-06 8_[-3]_78 chrVII:609310-610100 2.4e-06 67_[-3]_19 chrII:477027-477785 2.4e-06 14_[-3]_72 chrXIII:352093-352634 2.4e-06 62_[+3]_24 chrVII:648785-649365 2.8e-06 61_[-3]_25 chrV:550857-551601 3.2e-06 36_[+3]_50 chrIV:520675-521467 3.2e-06 45_[+3]_41 chrXVI:880095-880555 3.7e-06 5_[-3]_81 chrIV:410167-410790 3.7e-06 26_[+3]_60 chrIII:82235-82662 4.4e-06 49_[-3]_37 chrIV:667775-668262 4.4e-06 25_[-3]_61 chrX:378213-378313 5e-06 83_[+3]_3 chrX:531599-531699 5e-06 9_[+3]_77 chrXIV:738807-740167 5e-06 41_[+3]_45 chrXII:522161-522429 5e-06 11_[-3]_75 chrIII:151047-151523 5.5e-06 21_[+3]_65 chrXV:901432-901647 5.5e-06 3_[-3]_83 chrXII:1028194-1028600 6.2e-06 80_[+3]_6 chrVIII:455210-456016 6.2e-06 75_[+3]_11 chrX:422710-422810 6.2e-06 20_[+3]_66 chrXII:92400-92867 6.2e-06 70_[+3]_16 chrVII:545132-546005 6.8e-06 18_[+3]_68 chrVII:412037-412580 6.8e-06 20_[-3]_66 chrXII:975780-976202 7.5e-06 27_[-3]_59 chrX:414770-414870 7.5e-06 80_[+3]_6 chrIX:210659-210960 8.9e-06 48_[+3]_38 chrIX:426863-427810 8.9e-06 19_[+3]_67 chrXIV:568051-568534 8.9e-06 68_[-3]_18 chrVII:986378-987774 9.7e-06 79_[+3]_7 chrVIII:388668-389003 1.1e-05 77_[-3]_9 chrV:167091-167614 1.1e-05 75_[-3]_11 chrXIII:837749-838231 1.1e-05 77_[+3]_9 chrVII:774095-774688 1.1e-05 81_[+3]_5 chrXII:83934-84334 1.2e-05 33_[+3]_53 chrXII:1051905-1052230 1.3e-05 36_[-3]_50 chrXII:214626-215068 1.3e-05 69_[-3]_17 chrIV:1175743-1176093 1.4e-05 52_[+3]_34 chrVIII:400999-401331 1.4e-05 23_[-3]_63 chrXII:447872-449052 1.4e-05 33_[-3]_53 chrXIII:253328-253740 1.6e-05 42_[+3]_44 chrXIV:289343-290137 1.6e-05 7_[-3]_79 chrVII:401408-401620 1.7e-05 6_[-3]_80 chrV:288143-288767 1.7e-05 23_[-3]_63 chrII:44954-45378 1.9e-05 6_[-3]_80 chrIV:1278227-1279362 1.9e-05 [+3]_86 chrXVI:404250-405903 1.9e-05 43_[+3]_43 chrXVI:585794-587663 2.1e-05 78_[-3]_8 chrVII:555129-557493 2.1e-05 23_[+3]_63 chrVI:226402-226927 2.3e-05 59_[-3]_27 chrII:301112-302188 2.5e-05 85_[+3]_1 chrX:90033-90133 2.7e-05 82_[+3]_4 chrIV:117160-118201 2.7e-05 52_[-3]_34 chrXI:258095-259993 2.7e-05 79_[-3]_7 chrVIII:147719-148757 2.9e-05 64_[-3]_22 chrI:181131-181521 3.1e-05 76_[-3]_10 chrIV:216578-218078 3.6e-05 9_[-3]_77 chrV:492193-492565 3.9e-05 7_[-3]_79 chrX:650861-650961 3.9e-05 3_[-3]_83 chrXI:578695-579375 3.9e-05 75_[+3]_11 chrVII:590733-591651 4.3e-05 1_[-3]_85 chrXI:74385-74988 5e-05 65_[+3]_21 chrVIII:379294-380238 6.8e-05 75_[-3]_11 chrVIII:381449-382534 7.7e-05 14_[-3]_72 chrXV:168120-168383 8.8e-05 78_[+3]_8 chrIV:340265-341667 8.8e-05 15_[-3]_71 chrX:196858-196958 9.4e-05 83_[-3]_3 chrVII:533828-535191 0.00011 20_[-3]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTTTTTTTC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTTTTTTTTTTTC width=14 seqs=90 chrXIV:88950-89724 ( 38) TTTTTTTTTTTTTC 1 chrXIII:652042-652954 ( 86) TTTTTTTTTTTTTC 1 chrXI:517789-518285 ( 86) TTTTTTTTTTTTTC 1 chrVII:706896-707185 ( 51) TTTTTTTTTTTTTG 1 chrXII:369643-371364 ( 35) TTTTTTTTTTTTTG 1 chrII:36243-36797 ( 35) TTCTTTTTTTTTTC 1 chrIX:248490-249429 ( 36) TTTTTTTTTTTTTT 1 chrXVI:188324-189278 ( 78) ATTTTTTTTTTTTC 1 chrVII:878323-879017 ( 64) ATTTTTTTTTTTTC 1 chrXV:384637-385076 ( 1) ATTTTTTTTTTTTC 1 chrIV:1344614-1346010 ( 57) TTTTTATTTTTTTC 1 chrII:373162-373707 ( 75) TTTTTCTTTTTTTC 1 chrIV:83327-83949 ( 39) TTTTTTTCTTTTTC 1 chrXVI:768631-769498 ( 51) TATTTTTTTTTTTC 1 chrVII:968574-969215 ( 50) TTTTTTTTTTCTTC 1 chrXIV:725905-726393 ( 17) TTTTTTTTATTTTG 1 chrXIV:715987-716607 ( 8) TTTTTTTTATTTTG 1 chrXV:571688-572156 ( 20) TTTTTTATTTTTTC 1 chrII:642822-643247 ( 10) TTCTTTTTTTTTTT 1 chrIV:1013405-1013977 ( 86) TTCTTCTTTTTTTC 1 chrIX:68252-68505 ( 49) TTTTTCTTTTTTTG 1 chrXIII:320905-321326 ( 67) TTTTTATTTTTTTG 1 chrXII:808970-809552 ( 45) TTCTTTTCTTTTTC 1 chrIV:1016963-1017501 ( 9) TCTTTTTTATTTTC 1 chrVII:609310-610100 ( 68) TCCTTTTTTTTTTC 1 chrII:477027-477785 ( 15) TTTTTTTTTTCTTG 1 chrXIII:352093-352634 ( 63) TTTTTTTTACTTTT 1 chrVII:648785-649365 ( 62) TTCTTTTTATTTTT 1 chrV:550857-551601 ( 37) TTTTTTATTTTTTT 1 chrIV:520675-521467 ( 46) TTTATTTTTCTTTC 1 chrXVI:880095-880555 ( 6) TTCTTTTCTCTTTC 1 chrIV:410167-410790 ( 27) TATTTTTTACTTTC 1 chrIII:82235-82662 ( 50) TTTTTTTTTTCTGC 1 chrIV:667775-668262 ( 26) ATTTTTATTTTTTC 1 chrX:378213-378313 ( 84) TTTTTTGTTTTTTT 1 chrX:531599-531699 ( 10) CTTTTCTTTTTTTC 1 chrXIV:738807-740167 ( 42) TTTTTTGTTTTTTT 1 chrXII:522161-522429 ( 12) GTTTTTTTTTTTTG 1 chrIII:151047-151523 ( 22) TTTCTTTCTTTTTC 1 chrXV:901432-901647 ( 4) TTTTTATCTCTTTC 1 chrXII:1028194-1028600 ( 81) ATTTTTTTTCTTGC 1 chrVIII:455210-456016 ( 76) TATCTTTTTTTTTC 1 chrX:422710-422810 ( 21) ATTTTCTTTTTTTG 1 chrXII:92400-92867 ( 71) ATTTTCTTTTTTTG 1 chrVII:545132-546005 ( 19) TCCTTTTTTCTTTC 1 chrVII:412037-412580 ( 21) GTTTTATTTTTTTC 1 chrXII:975780-976202 ( 28) TTTATTTTTTTTGC 1 chrX:414770-414870 ( 81) TATTTTTTTCTTGC 1 chrIX:210659-210960 ( 49) TACTTTTTTTTTGC 1 chrIX:426863-427810 ( 20) CCTTTTTTTTTTTC 1 chrXIV:568051-568534 ( 69) TTTTTTTTTTTATC 1 chrVII:986378-987774 ( 80) TTTTTTTTTTTGGC 1 chrVIII:388668-389003 ( 78) TTTTTTGTTCTTTG 1 chrV:167091-167614 ( 76) TTTATTTTTCTTTG 1 chrXIII:837749-838231 ( 78) ATTTTTTTACTTTT 1 chrVII:774095-774688 ( 82) ATTTTTTTACTTTT 1 chrXII:83934-84334 ( 34) TATTTCTTTTTTGC 1 chrXII:1051905-1052230 ( 37) TTTTTTTTACTTTA 1 chrXII:214626-215068 ( 70) TATTTTTTACTTTT 1 chrIV:1175743-1176093 ( 53) TTTTTTTTATTCTC 1 chrVIII:400999-401331 ( 24) TTTTTTTTTTCTGT 1 chrXII:447872-449052 ( 34) TTTTTAGTTCTTTC 1 chrXIII:253328-253740 ( 43) CTCTTTTCTTTTTC 1 chrXIV:289343-290137 ( 8) TTTCTTTTATTTGC 1 chrVII:401408-401620 ( 7) AATTTTTTTTCTTC 1 chrV:288143-288767 ( 24) TTTTTTTTATTGTT 1 chrII:44954-45378 ( 7) TTCATTTCTTTTTC 1 chrIV:1278227-1279362 ( 1) TACTTATTATTTTC 1 chrXVI:404250-405903 ( 44) AATTTTTTTCTTTT 1 chrXVI:585794-587663 ( 79) TTTTTATTATTGTC 1 chrVII:555129-557493 ( 24) TTTTTATTATTTGT 1 chrVI:226402-226927 ( 60) TATCTCTTTTTTTC 1 chrII:301112-302188 ( 86) ATTTTATCTTTTTG 1 chrX:90033-90133 ( 83) TTGTTTTTTTTTTA 1 chrIV:117160-118201 ( 53) TCTTTATTATTTTG 1 chrXI:258095-259993 ( 80) TTGTTTTTTTTTTA 1 chrVIII:147719-148757 ( 65) TCCTTCTTTTTTTG 1 chrI:181131-181521 ( 77) TTGTTTTTATCTTC 1 chrIV:216578-218078 ( 10) CTTTTCATTTTTTC 1 chrV:492193-492565 ( 8) ATTATTTTTCTTTT 1 chrX:650861-650961 ( 4) ATTTTAATATTTTC 1 chrXI:578695-579375 ( 76) TTCTTTACTTTTTT 1 chrVII:590733-591651 ( 2) GTTCTTTTTTTTTT 1 chrXI:74385-74988 ( 66) TTTTTAACTTTTTT 1 chrVIII:379294-380238 ( 76) TATTTATCATTTTT 1 chrVIII:381449-382534 ( 15) TTTATTATATTTTT 1 chrXV:168120-168383 ( 79) TTCTTATTATTTAC 1 chrIV:340265-341667 ( 16) TATTTATTTCCTTT 1 chrX:196858-196958 ( 84) ATTTTTTTATTTAT 1 chrVII:533828-535191 ( 21) TACTTTTTACTTTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTTTTTTTC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 14 n= 52200 bayes= 10.2243 E= 7.5e-047 -86 -215 -256 132 -96 -156 -1314 136 -1314 -15 -256 138 -218 -182 -1314 153 -1314 -1314 -1314 172 -86 -82 -1314 125 -177 -1314 -215 152 -1314 -69 -1314 153 -19 -1314 -1314 127 -1314 10 -1314 138 -1314 -134 -1314 160 -477 -414 -256 164 -377 -1314 -82 152 -277 147 -24 -31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTTTTTTTC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 14 nsites= 90 E= 7.5e-047 0.166667 0.044444 0.033333 0.755556 0.155556 0.066667 0.000000 0.777778 0.000000 0.177778 0.033333 0.788889 0.066667 0.055556 0.000000 0.877778 0.000000 0.000000 0.000000 1.000000 0.166667 0.111111 0.000000 0.722222 0.088889 0.000000 0.044444 0.866667 0.000000 0.122222 0.000000 0.877778 0.266667 0.000000 0.000000 0.733333 0.000000 0.211111 0.000000 0.788889 0.000000 0.077778 0.000000 0.922222 0.011111 0.011111 0.033333 0.944444 0.022222 0.000000 0.111111 0.866667 0.044444 0.544444 0.166667 0.244444 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTTTTTTTTTTC MEME-3 regular expression -------------------------------------------------------------------------------- TTTTTTTT[TA][TC]TTT[CT] -------------------------------------------------------------------------------- Time 1092.17 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:373162-373707 1.25e-03 74_[+3(3.03e-07)]_12 chrVIII:119719-121693 5.97e-01 100 chrXV:24344-24815 9.87e-01 100 chrVII:10252-10415 1.98e-01 100 chrXI:162297-162752 3.93e-11 20_[-1(3.68e-11)]_14_[-2(1.89e-07)]_\ 16 chrI:166167-166742 4.88e-01 100 chrIV:1354418-1356264 9.30e-01 100 chrXVI:821644-824224 7.35e-01 100 chrXIII:572698-573170 6.94e-08 6_[-1(5.97e-09)]_15_[-2(2.19e-06)]_\ 29 chrVII:440489-443052 8.86e-01 100 chrVII:364924-366727 9.03e-01 100 chrXI:313220-314010 7.78e-01 100 chrIV:600720-602281 3.05e-01 100 chrIII:127533-127907 2.45e-04 45_[+2(2.08e-07)]_34 chrXVI:406176-407806 8.09e-01 100 chrIV:1086425-1086624 6.13e-01 100 chrXI:512859-513609 1.43e-01 100 chrIX:322989-324387 8.65e-02 100 chrXIV:560612-560912 9.77e-05 32_[-2(1.39e-08)]_47 chrIV:975888-977209 2.90e-01 100 chrXII:416567-417023 4.28e-01 100 chrIX:316123-318847 8.87e-01 100 chrII:301112-302188 7.18e-03 85_[+3(2.47e-05)]_1 chrXI:364554-365218 5.22e-01 100 chrXVI:108565-110255 4.89e-01 100 chrVII:384109-384990 9.63e-01 100 chrXV:638892-639489 9.80e-01 100 chrXII:92400-92867 2.66e-09 30_[+1(7.09e-11)]_11_[+3(6.23e-06)]_\ 16 chrVII:787094-788760 9.90e-01 100 chrXV:779671-781016 3.93e-01 100 chrXIII:161902-162646 1.33e-01 100 chrV:135199-136034 4.55e-01 100 chrXVI:581838-582323 2.91e-12 31_[+2(1.40e-07)]_15_[+1(9.02e-12)]_\ 4 chrII:504539-505027 6.77e-01 100 chrIV:667775-668262 2.89e-11 25_[-3(4.37e-06)]_7_[-1(1.15e-12)]_\ 25 chrXV:520394-520966 9.44e-01 100 chrIV:915382-916255 3.65e-01 100 chrXIII:761567-763141 2.22e-01 100 chrVI:219955-222269 7.97e-01 100 chrXII:734591-735006 3.71e-06 53_[+2(1.16e-09)]_26 chrVIII:125890-127512 8.73e-01 100 chrX:415714-415814 6.13e-06 16_[-1(1.02e-09)]_55 chrVII:310472-312202 6.05e-01 100 chrVIII:296846-297235 4.97e-01 100 chrXII:875062-875998 5.87e-01 100 chrXIII:258865-259444 4.74e-03 100 chrXIV:229685-230713 1.61e-01 100 chrXIV:715987-716607 2.48e-03 7_[+3(5.88e-07)]_79 chrII:266189-266653 8.35e-11 6_[+2(1.39e-08)]_15_[+1(5.98e-10)]_\ 29 chrXVI:775571-776063 1.28e-09 5_[-1(1.21e-08)]_14_[-2(1.39e-08)]_\ 31 chrXIII:91156-92230 3.47e-01 100 chrIX:25942-26646 7.76e-01 100 chrXV:487432-487767 7.19e-01 100 chrXIII:253900-254077 3.69e-01 100 chrVII:845458-846171 6.16e-01 100 chrXI:518656-521190 4.55e-01 100 chrX:348838-348938 3.05e-01 100 chrVI:183287-184158 3.18e-01 100 chrXVI:280534-282945 7.95e-01 100 chrVI:95466-95938 2.79e-01 100 chrXI:307851-308716 6.04e-02 100 chrXII:855801-856263 8.11e-01 100 chrXII:47491-49170 3.07e-01 100 chrXI:3-180 9.63e-02 100 chrV:221426-221803 5.03e-01 100 chrIV:1075294-1075765 2.22e-08 [-1(1.50e-10)]_15_[-2(2.70e-05)]_35 chrVII:148167-149507 5.60e-01 100 chrXIII:352093-352634 5.00e-08 20_[+1(4.12e-09)]_13_[+3(2.41e-06)]_\ 24 chrXIV:96039-96472 2.00e-06 43_[-1(2.81e-09)]_28 chrIII:74-1765 5.51e-01 100 chrXII:546518-547517 2.82e-01 100 chrVII:959322-959645 6.56e-01 100 chrXI:74385-74988 2.01e-06 24_[+1(9.35e-09)]_12_[+3(5.03e-05)]_\ 21 chrIII:82235-82662 3.22e-11 49_[-3(4.37e-06)]_8_[-1(2.24e-12)] chrXII:1017759-1019431 1.19e-01 100 chrIII:123183-123833 9.88e-02 100 chrV:266197-268132 5.12e-01 100 chrXII:447872-449052 3.77e-03 33_[-3(1.43e-05)]_53 chrIV:1161466-1162579 9.75e-01 100 chrXII:214626-215068 3.47e-02 69_[-3(1.28e-05)]_17 chrVII:185391-185910 7.08e-01 100 chrXVI:502487-503283 9.91e-01 100 chrVI:64167-65380 1.92e-01 100 chrXIV:675457-676022 7.00e-01 100 chrVII:774095-774688 1.11e-14 7_[+2(4.41e-10)]_15_[+1(7.43e-10)]_\ 9_[+3(1.06e-05)]_5 chrXII:423708-424733 6.62e-01 100 chrXVI:404250-405903 3.37e-02 43_[+3(1.93e-05)]_43 chrXII:932056-932568 2.19e-01 100 chrXV:925174-925417 9.75e-01 100 chrVII:1050156-1050610 6.31e-01 100 chrVI:222758-224158 7.10e-01 100 chrXI:772-1077 5.00e-01 100 chrXV:1003923-1004952 1.45e-01 10_[+3(5.85e-05)]_76 chrIV:322138-323563 2.30e-02 100 chrXV:160316-160711 9.87e-01 100 chrVII:677807-678069 8.15e-01 100 chrXVI:214524-216319 4.09e-01 100 chrXII:592336-592825 1.52e-05 68_[-2(8.00e-09)]_11 chrXVI:819340-820132 1.41e-01 100 chrVIII:358285-358758 1.03e-08 14_[-1(4.12e-09)]_34_[-2(1.43e-06)]_\ 2 chrV:469265-469696 6.84e-11 26_[+2(3.38e-08)]_16_[+1(2.71e-10)]_\ 8 chrIII:149728-150197 4.31e-07 7_[+2(2.04e-06)]_14_[+1(8.60e-08)]_\ 29 chrXVI:608136-608920 5.71e-01 100 chrXIII:26205-26469 6.66e-01 100 chrXII:366040-366552 9.14e-02 100 chrII:702146-702462 4.98e-01 100 chrIV:387533-388082 3.43e-01 100 chrXVI:927701-928585 7.34e-01 100 chrXIII:67664-68019 6.70e-01 100 chrXV:92688-94794 7.94e-01 100 chrXIII:162957-164330 5.16e-01 100 chrIX:174686-175224 9.28e-01 100 chrIV:520675-521467 1.60e-02 45_[+3(3.23e-06)]_41 chrIII:107165-107827 1.07e-01 100 chrV:41772-42711 7.47e-02 100 chrXVI:941383-942851 9.61e-01 100 chrXV:444612-446384 9.43e-01 100 chrXII:962829-963284 8.85e-05 28_[-2(4.70e-07)]_51 chrIX:138127-139252 7.93e-01 100 chrXV:383047-383689 8.66e-01 100 chrVII:702789-703588 9.81e-01 100 chrI:182308-183189 1.27e-01 100 chrI:68363-68758 7.71e-01 100 chrIV:592379-592889 1.81e-01 100 chrV:310937-312317 2.40e-01 100 chrVII:515671-518955 7.02e-01 100 chrXV:986822-987957 7.23e-01 100 chrXIII:768187-768448 7.15e-01 100 chrXV:853960-854798 2.55e-01 100 chrX:422710-422810 1.71e-03 20_[+3(6.23e-06)]_66 chrVII:592115-592937 1.08e-01 100 chrX:360278-360378 7.48e-02 34_[+2(9.43e-05)]_45 chrXII:636726-639971 5.57e-02 100 chrXII:242182-243427 9.56e-01 100 chrXVI:785665-786778 3.16e-01 100 chrXIII:586354-586899 3.13e-07 67_[-1(2.71e-10)]_4 chrXIV:501066-502783 7.73e-01 100 chrIV:1278227-1279362 1.88e-02 [+3(1.93e-05)]_86 chrVII:533828-535191 1.17e-01 27_[-3(9.43e-05)]_59 chrXI:430681-432327 5.33e-01 100 chrXI:302709-303242 1.62e-06 61_[+1(1.02e-09)]_10 chrV:214543-214942 6.43e-01 100 chrXI:517789-518285 4.86e-17 [+2(4.41e-10)]_15_[+1(7.43e-10)]_20_\ [+3(3.57e-08)]_1 chrXV:594212-594648 2.92e-04 24_[-2(6.73e-08)]_55 chrIV:1156234-1156951 3.69e-01 100 chrIV:980663-981159 7.01e-01 100 chrVII:443336-443844 6.46e-01 100 chrX:517642-517742 3.49e-03 4_[-2(2.04e-06)]_75 chrXI:21351-21890 1.22e-01 100 chrVII:986378-987774 1.35e-02 79_[+3(9.69e-06)]_7 chrXIV:62021-64512 6.79e-01 100 chrVII:930789-931693 5.07e-01 100 chrXIII:463325-463882 8.92e-07 [+2(3.70e-05)]_14_[+1(2.18e-08)]_36 chrIV:555392-556606 1.14e-02 100 chrVIII:134104-134654 1.69e-06 26_[+1(1.91e-10)]_45 chrIV:1305399-1305841 3.49e-05 59_[+2(5.98e-09)]_20 chrVII:555129-557493 7.00e-02 23_[+3(2.11e-05)]_63 chrVIII:521630-522460 3.97e-01 100 chrII:59648-61253 1.74e-01 43_[-2(9.73e-05)]_36 chrXII:498304-499699 2.45e-01 100 chrVII:1000068-1000571 2.99e-01 100 chrXIII:290575-291119 7.97e-10 38_[+1(2.24e-12)]_33 chrV:550857-551601 5.11e-03 36_[+3(3.23e-06)]_50 chrVII:277023-278731 5.56e-01 100 chrIV:599739-600323 4.76e-01 100 chrIV:340265-341667 8.71e-02 15_[-3(8.82e-05)]_71 chrXII:1051905-1052230 1.48e-10 36_[-3(1.28e-05)]_11_[-1(1.15e-12)]_\ 10 chrVIII:48198-48723 6.17e-01 100 chrII:391448-391848 9.90e-01 100 chrXV:109506-110671 2.30e-01 100 chrX:123567-123667 6.74e-01 100 chrXV:159248-160131 1.42e-01 100 chrXI:326077-327606 8.72e-01 100 chrXIV:173590-174652 8.37e-01 100 chrVIII:34386-36380 5.44e-05 47_[-2(1.15e-07)]_32 chrXIV:585489-586577 5.69e-01 100 chrX:355191-355291 4.70e-05 3_[+1(2.18e-08)]_68 chrIV:1236434-1237979 4.91e-01 100 chrX:291030-291130 4.46e-02 72_[-2(5.92e-05)]_7 chrIX:175385-175628 1.06e-02 41_[+2(5.02e-06)]_38 chrIV:359361-359795 4.22e-03 48_[+2(1.33e-06)]_31 chrXVI:856731-857167 2.89e-13 2_[+2(4.41e-10)]_15_[+1(7.43e-10)]_\ 33 chrV:396180-397851 3.72e-01 100 chrVIII:62559-62921 1.30e-02 64_[+2(2.86e-06)]_15 chrI:181131-181521 2.08e-02 76_[-3(3.12e-05)]_10 chrXV:571688-572156 4.90e-03 19_[+3(7.02e-07)]_67 chrIV:410167-410790 6.81e-03 26_[+3(3.72e-06)]_60 chrII:36243-36797 6.41e-04 34_[+3(1.54e-07)]_52 chrIX:370226-370672 1.44e-09 52_[+1(2.24e-12)]_19 chrIV:216578-218078 8.43e-02 9_[-3(3.64e-05)]_77 chrXII:515285-516896 6.09e-01 100 chrIII:78264-78898 1.71e-01 100 chrXII:808970-809552 9.43e-03 44_[-3(1.50e-06)]_42 chrXI:666007-666265 1.20e-01 100 chrXVI:75095-75331 5.47e-01 100 chrIX:141805-142341 9.09e-01 100 chrI:71758-73255 5.76e-01 100 chrIX:231288-232412 9.39e-01 100 chrVIII:103574-105466 5.54e-01 100 chrX:233731-233831 6.53e-04 41_[+2(9.08e-07)]_38 chrXV:29275-30842 4.20e-01 100 chrXIII:837749-838231 1.25e-07 39_[+1(4.97e-09)]_9_[+3(1.06e-05)]_\ 9 chrIV:619698-620263 2.78e-06 46_[-1(3.42e-10)]_25 chrII:165043-165883 7.90e-01 100 chrVII:483297-483705 2.18e-03 26_[+1(4.14e-07)]_45 chrXI:617724-619309 1.01e-01 100 chrV:443050-443363 1.79e-09 53_[-1(1.15e-12)]_18 chrX:181752-181852 6.70e-01 100 chrVII:412957-413703 4.17e-01 100 chrXIV:575191-576163 7.32e-01 100 chrXVI:519547-520529 4.02e-01 100 chrXII:903320-904446 9.37e-01 100 chrXVI:425311-425611 8.42e-01 100 chrXII:369643-371364 9.99e-04 34_[+3(1.54e-07)]_5_[+3(1.56e-05)]_\ 33 chrXV:236041-236591 8.66e-01 100 chrIX:388206-388886 4.12e-01 100 chrV:305817-306937 2.23e-01 100 chrXVI:378631-378996 3.24e-01 100 chrXI:578695-579375 2.28e-08 38_[+1(3.42e-10)]_8_[+3(3.93e-05)]_\ 11 chrXV:234053-234821 9.10e-01 100 chrIV:1359424-1361334 7.96e-01 100 chrX:703244-703344 6.81e-01 100 chrIV:541288-541916 6.57e-02 7_[-3(7.24e-05)]_79 chrIV:411232-411669 3.28e-01 100 chrX:157438-157538 3.13e-01 100 chrXIII:808013-808530 4.02e-11 32_[-1(1.71e-09)]_14_[-2(9.30e-08)]_\ 4 chrII:44954-45378 2.80e-02 6_[-3(1.93e-05)]_80 chrXII:727654-730291 1.76e-01 100 chrVII:110306-110789 8.42e-01 100 chrIX:197372-197852 8.86e-10 29_[+2(8.55e-05)]_14_[+1(2.24e-12)]_\ 7 chrVII:412037-412580 1.12e-08 20_[-3(6.78e-06)]_9_[-1(2.71e-10)]_\ 28 chrXV:901432-901647 7.83e-03 3_[-3(5.54e-06)]_83 chrVII:479173-482719 9.38e-01 100 chrXV:710116-710524 1.35e-01 2_[+3(5.85e-05)]_84 chrXII:232096-234259 6.31e-02 100 chrIV:306696-310169 8.97e-01 100 chrIII:30556-31170 4.04e-01 100 chrII:6188-6514 2.37e-01 100 chrXIII:420182-420885 6.97e-01 100 chrIII:227753-228977 3.35e-01 100 chrIX:299998-300480 2.89e-08 46_[-1(9.02e-12)]_25 chrXI:490765-491463 3.71e-01 100 chrIII:90850-91186 3.55e-01 100 chrII:466277-466883 5.28e-01 100 chrIV:946145-946617 3.00e-05 32_[+1(4.97e-09)]_39 chrV:486774-487588 6.10e-01 100 chrXVI:768631-769498 1.02e-03 50_[+3(3.86e-07)]_36 chrVIII:16577-18245 4.97e-01 100 chrXV:443798-444234 2.95e-01 100 chrV:167091-167614 2.78e-02 75_[-3(1.06e-05)]_11 chrXI:140784-141487 4.57e-01 100 chrIV:1256793-1257283 1.41e-08 27_[-1(8.56e-09)]_14_[-2(3.62e-07)]_\ 9 chrXII:449374-450429 1.37e-02 62_[+1(6.82e-05)]_9 chrV:490928-491858 8.82e-01 100 chrXII:856437-857551 9.49e-02 100 chrVIII:173566-175765 3.47e-01 100 chrXVI:701895-702327 3.94e-01 100 chrXVI:338670-339237 2.19e-01 100 chrXI:258095-259993 5.41e-03 79_[-3(2.67e-05)]_7 chrIX:178835-179066 9.85e-01 100 chrXV:407563-408218 2.47e-01 100 chrIV:802555-803002 9.56e-11 10_[-1(1.91e-10)]_14_[-2(9.30e-08)]_\ 26 chrV:441809-442705 9.01e-01 100 chrXV:1053882-1054736 2.20e-01 100 chrIII:295298-295924 5.97e-01 100 chrVII:590733-591651 2.65e-03 [-3(8.46e-07)]_86 chrXVI:585794-587663 5.54e-02 78_[-3(2.11e-05)]_8 chrXIII:550007-551829 9.98e-01 100 chrXIV:525067-525284 9.63e-01 100 chrXVI:640635-641609 1.94e-01 100 chrVII:273-1170 2.99e-01 100 chrXII:793776-796857 5.15e-01 100 chrXIII:296737-298880 9.80e-01 100 chrVIII:147719-148757 9.09e-02 64_[-3(2.88e-05)]_22 chrI:28553-28911 8.92e-01 100 chrI:190012-191715 6.08e-02 100 chrVII:544407-544847 1.84e-06 7_[-1(2.18e-08)]_14_[-2(3.70e-05)]_\ 29 chrXIII:914884-915761 2.84e-01 100 chrXIII:320905-321326 3.13e-03 66_[-3(1.23e-06)]_20 chrXI:354775-356828 1.04e-01 100 chrXIV:289343-290137 4.57e-02 7_[-3(1.56e-05)]_79 chrXIV:776669-777430 8.06e-01 100 chrXII:522161-522429 2.40e-02 11_[-3(5.03e-06)]_75 chrIV:1461465-1461847 1.37e-01 100 chrXII:628198-628683 4.23e-01 100 chrV:241938-242599 4.59e-01 100 chrVIII:455210-456016 1.14e-02 75_[+3(6.23e-06)]_11 chrXI:67102-69246 7.47e-01 100 chrVII:561466-561733 9.29e-01 100 chrXII:374193-374671 1.36e-06 8_[+1(3.42e-10)]_63 chrV:138446-141445 6.36e-01 100 chrXIV:546536-547667 2.21e-05 42_[+2(6.92e-09)]_37 chrX:607891-607991 9.68e-01 100 chrIV:221380-222361 3.69e-01 100 chrVII:876182-877152 7.07e-01 100 chrXII:919429-923681 6.83e-01 100 chrXII:710560-710881 8.38e-01 100 chrII:405680-406266 1.46e-06 36_[+2(3.70e-05)]_14_[+1(2.18e-08)] chrVII:254094-254728 6.50e-02 100 chrV:207352-207876 1.78e-01 100 chrXV:988246-989618 9.98e-01 100 chrXI:99702-100078 6.91e-01 100 chrVI:191213-191767 1.08e-01 100 chrVII:422882-423393 1.42e-03 4_[+2(6.06e-07)]_75 chrXII:656822-657200 2.17e-06 24_[-2(4.41e-10)]_55 chrX:744983-745083 7.37e-01 100 chrV:335469-336373 3.94e-01 100 chrX:542774-542874 2.02e-03 57_[-2(1.33e-06)]_22 chrXIII:388325-389572 8.96e-01 100 chrX:374176-374276 4.31e-09 [-2(3.70e-05)]_18_[-1(3.68e-11)]_32 chrII:392533-394844 2.57e-01 100 chrVII:828475-828983 2.45e-07 51_[-1(3.68e-11)]_20 chrXVI:112104-114959 2.78e-01 100 chrXIII:220044-221094 7.75e-01 100 chrIX:325737-326138 3.45e-01 100 chrV:460558-462229 5.23e-01 100 chrXI:381572-382475 7.85e-01 100 chrX:396591-396691 9.36e-04 27_[-2(2.29e-07)]_52 chrII:9450-9876 8.72e-05 27_[-1(2.77e-08)]_44 chrXIV:374652-375135 1.23e-03 25_[+2(1.06e-06)]_54 chrXIII:224101-224581 6.71e-01 100 chrVII:766013-766971 8.92e-01 100 chrV:422735-425379 6.13e-01 100 chrXIII:887011-889304 6.23e-01 100 chrIV:488416-489142 4.61e-04 64_[+1(8.73e-07)]_7 chrVIII:381449-382534 1.74e-01 14_[-3(7.73e-05)]_72 chrIV:14-235 7.47e-01 100 chrXV:967970-968514 1.29e-01 100 chrXV:161124-162019 5.44e-01 100 chrVII:323412-325100 7.18e-01 100 chrXIV:738807-740167 1.96e-02 41_[+3(5.03e-06)]_45 chrII:642822-643247 3.74e-13 9_[-3(8.46e-07)]_7_[-1(1.21e-08)]_\ 14_[-2(1.39e-08)]_6 chrIV:1361770-1362683 7.28e-01 100 chrVI:167243-167686 1.91e-03 22_[+2(1.33e-06)]_57 chrXV:464280-464739 3.06e-07 55_[+1(7.09e-11)]_16 chrX:390800-390900 3.48e-01 100 chrXIII:652042-652954 4.39e-04 85_[+3(3.57e-08)]_1 chrIV:1086835-1087726 6.31e-01 100 chrXII:241616-242018 7.24e-01 100 chrXIV:631596-632122 4.26e-09 44_[-1(1.61e-12)]_27 chrXIII:480383-480832 7.71e-08 71_[-1(9.02e-12)] chrXII:1028194-1028600 1.63e-02 80_[+3(6.23e-06)]_6 chrV:434381-434978 8.33e-01 100 chrIV:644377-645367 7.46e-01 100 chrIV:129857-131236 7.17e-01 100 chrXV:347421-347776 1.24e-01 100 chrXVI:653729-655033 8.07e-01 100 chrX:523761-523861 3.81e-05 49_[-2(5.98e-09)]_30 chrIV:1162976-1164647 8.23e-01 100 chrXIV:442730-444807 6.75e-01 100 chrV:174125-175042 3.11e-01 100 chrVIII:400999-401331 2.41e-02 23_[-3(1.43e-05)]_63 chrIX:183295-183793 8.18e-01 100 chrVIII:411017-411648 7.74e-01 100 chrVII:661533-661987 6.91e-04 38_[+2(1.27e-07)]_41 chrIV:914020-914829 6.02e-01 100 chrXV:274477-275015 1.87e-02 100 chrX:531599-531699 1.16e-02 9_[+3(5.03e-06)]_2_[-3(1.74e-05)]_\ 61 chrXVI:731669-732412 1.70e-01 100 chrXV:113602-113927 3.72e-01 100 chrV:117347-118299 1.98e-01 100 chrIV:519651-519974 3.53e-06 38_[-1(3.25e-08)]_33 chrV:354695-355340 3.81e-08 1_[+1(2.24e-12)]_70 chrVI:210317-210907 5.59e-06 64_[-1(4.97e-09)]_7 chrII:408634-408935 4.97e-01 100 chrXIII:19055-20610 8.42e-01 100 chrIV:491460-492690 1.22e-01 100 chrVII:824471-826262 3.22e-01 100 chrII:644926-645433 7.14e-02 100 chrII:554485-555106 4.74e-01 100 chrXV:391006-392330 2.61e-01 100 chrX:606079-606179 2.55e-01 100 chrX:650861-650961 7.97e-02 3_[-3(3.93e-05)]_83 chrX:424245-424345 2.83e-08 [+1(2.77e-08)]_37_[-2(4.70e-07)]_13 chrXII:1011718-1012853 9.85e-01 100 chrXIV:771649-772448 1.19e-01 100 chrXI:46601-47000 1.73e-06 35_[-2(2.32e-09)]_44 chrXV:28422-29098 1.65e-02 100 chrVII:545132-546005 4.16e-03 18_[+3(6.78e-06)]_68 chrVI:180631-181270 1.11e-01 100 chrVIII:562331-562594 6.95e-01 100 chrXI:219724-220120 3.82e-12 22_[+2(4.41e-10)]_15_[+1(7.43e-10)]_\ 13 chrXIV:763975-764561 9.56e-01 100 chrVII:706896-707185 1.74e-03 50_[-3(1.54e-07)]_9_[-3(5.03e-06)]_\ 13 chrVII:989746-990509 4.02e-01 100 chrXIII:225163-226559 5.57e-01 100 chrVII:287144-287665 1.62e-06 3_[-1(1.02e-09)]_68 chrVIII:381055-381240 4.46e-01 100 chrIV:83327-83949 9.81e-05 38_[+3(3.27e-07)]_48 chrVI:224320-225352 7.38e-01 100 chrII:88938-89936 1.77e-01 100 chrXIII:302726-303323 1.50e-01 100 chrV:53498-54042 3.97e-01 100 chrIV:1175743-1176093 7.06e-04 7_[-1(3.24e-05)]_16_[+3(1.43e-05)]_\ 34 chrIV:1344614-1346010 8.23e-04 56_[-3(3.03e-07)]_30 chrII:181338-181663 4.48e-01 100 chrVIII:451288-452995 1.29e-01 100 chrIV:321649-321958 1.33e-01 100 chrVII:726404-728123 1.00e+00 100 chrXIII:131613-132100 2.72e-11 26_[-1(3.68e-11)]_14_[-2(1.89e-07)]_\ 10 chrXIV:104596-105043 7.73e-11 35_[+2(1.39e-08)]_15_[+1(5.98e-10)] chrII:377461-378255 7.74e-01 100 chrVIII:382725-383341 4.75e-01 100 chrXV:348772-349423 6.57e-01 100 chrVI:137238-137700 5.45e-02 100 chrXV:31370-31932 9.20e-01 100 chrXV:1027910-1029098 6.79e-01 100 chrV:377795-378800 6.70e-01 100 chrV:288143-288767 1.54e-03 23_[-3(1.74e-05)]_63 chrXVI:403905-404091 2.15e-01 100 chrX:196858-196958 1.84e-01 83_[-3(9.43e-05)]_3 chrVIII:505799-506370 1.76e-01 100 chrIX:68252-68505 4.55e-03 48_[+3(1.23e-06)]_38 chrV:66758-69406 8.78e-01 100 chrXI:334120-334960 4.93e-01 100 chrXIV:6616-7465 9.04e-01 100 chrXII:167750-168246 2.44e-06 56_[-2(5.98e-09)]_23 chrII:555767-556185 3.54e-01 100 chrVIII:115145-116427 8.99e-01 100 chrXIV:413613-414929 9.10e-01 100 chrII:226970-227354 1.06e-02 100 chrXVI:810579-812595 3.30e-02 66_[-2(4.63e-05)]_13 chrXIII:305971-307269 2.03e-01 100 chrVII:730963-731455 8.41e-05 14_[+1(9.35e-09)]_57 chrIV:1401214-1403373 3.54e-01 100 chrXIII:731843-733526 6.48e-01 100 chrVII:610291-611474 3.50e-01 100 chrVII:345849-346614 5.57e-01 100 chrXI:7839-8281 1.65e-01 100 chrX:538024-538124 4.21e-01 100 chrXII:261972-263983 4.00e-01 100 chrII:415518-416376 5.49e-01 100 chrX:26252-26352 8.49e-02 100 chrXVI:209646-210470 1.04e-01 100 chrXIII:797532-798237 8.31e-01 100 chrVII:398479-400132 6.46e-01 100 chrX:378213-378313 1.28e-13 8_[+2(3.38e-08)]_16_[+1(2.71e-10)]_\ 9_[+3(5.03e-06)]_3 chrX:540714-540814 2.04e-01 100 chrIV:1506591-1506816 4.51e-01 100 chrXVI:880095-880555 2.14e-17 5_[-3(3.72e-06)]_9_[-1(1.15e-12)]_\ 16_[-2(1.16e-09)]_6 chrXIII:747654-748144 4.29e-08 50_[-1(3.68e-11)]_21 chrVIII:148925-149277 3.42e-02 7_[+3(6.77e-05)]_56_[+3(6.28e-05)]_\ 9 chrIV:437538-438116 1.20e-02 100 chrXV:504931-506732 6.77e-01 100 chrIV:1450037-1451204 3.96e-01 100 chrXVI:920854-921505 7.77e-01 100 chrIV:992721-993395 8.89e-01 100 chrXIII:379026-379595 6.51e-07 50_[-1(1.02e-09)]_21 chrXV:758917-759509 9.09e-01 100 chrIV:1150697-1151168 1.94e-05 38_[-2(4.42e-09)]_41 chrIV:591716-592045 1.46e-01 100 chrXV:228105-228561 1.12e-03 47_[+2(2.08e-07)]_32 chrXII:818501-820420 4.17e-01 100 chrX:227735-227835 8.50e-01 100 chrVI:82124-84520 1.79e-01 100 chrXV:281989-282402 4.73e-11 18_[+2(2.29e-07)]_13_[+1(2.81e-11)]_\ 19 chrVI:226402-226927 6.01e-02 42_[+3(2.47e-05)]_3_[-3(2.31e-05)]_\ 27 chrVIII:5429-5590 4.29e-01 100 chrVI:101115-102213 9.38e-01 100 chrXIV:88950-89724 4.20e-04 37_[+3(3.57e-08)]_49 chrIV:385804-387357 4.27e-01 100 chrXIV:568051-568534 3.85e-02 70_[-3(8.35e-06)]_16 chrI:73425-73594 8.52e-01 100 chrVII:938920-939762 4.84e-01 100 chrXV:866301-868098 8.14e-01 100 chrXI:379685-380040 3.75e-01 100 chrXII:687646-687910 9.11e-01 100 chrX:139185-139285 2.51e-01 100 chrIV:1300421-1301348 8.13e-01 100 chrIV:218290-218618 5.03e-01 100 chrXVI:302660-304281 3.91e-01 100 chrV:362121-362489 2.82e-01 100 chrIV:118430-118727 4.92e-01 100 chrXI:458003-459016 9.11e-01 100 chrXV:908441-909166 5.40e-01 100 chrXIV:87469-87734 8.92e-01 100 chrXIII:826448-826921 7.60e-01 100 chrXII:704171-705016 8.19e-01 100 chrXVI:744074-744576 4.51e-08 8_[+2(1.27e-07)]_14_[+1(5.98e-08)]_\ 28 chrIV:1489085-1490453 2.72e-01 100 chrVII:121950-122930 6.73e-01 100 chrX:414770-414870 2.88e-14 5_[+2(1.40e-07)]_15_[+1(9.02e-12)]_\ 10_[+3(7.52e-06)]_6 chrVII:882420-884008 9.29e-02 100 chrII:332299-333210 7.50e-01 100 chrVIII:205758-206470 2.34e-01 100 chrIX:177575-178531 4.58e-01 100 chrIX:336100-336610 2.93e-06 51_[-1(2.18e-08)]_20 chrXIII:5451-5662 9.97e-01 100 chrVII:541708-542181 2.02e-02 100 chrV:302791-303353 9.95e-01 100 chrXV:424020-424698 3.73e-01 100 chrXII:950115-953693 3.64e-01 100 chrIV:1201535-1202404 1.21e-02 100 chrXVI:435649-436207 1.38e-11 3_[-3(3.93e-05)]_5_[-1(1.21e-08)]_\ 14_[-2(1.39e-08)]_14 chrX:73399-73499 6.88e-01 100 chrXV:340143-340586 8.97e-04 36_[-2(9.08e-07)]_43 chrIII:298924-299437 6.43e-01 100 chrVI:162025-162885 1.12e-02 27_[+1(5.23e-05)]_44 chrIX:426863-427810 4.28e-02 19_[+3(8.94e-06)]_67 chrIV:229122-231053 2.20e-01 100 chrVII:371219-371539 4.71e-01 100 chrXVI:575190-575650 9.47e-01 100 chrXII:605145-605611 8.71e-01 100 chrXV:384637-385076 1.14e-03 [+3(3.03e-07)]_86 chrIV:1507012-1507736 1.12e-01 23_[+2(7.25e-05)]_56 chrXI:261112-262133 8.10e-01 100 chrXII:975780-976202 3.64e-07 27_[-3(7.52e-06)]_8_[-1(9.35e-09)]_\ 22 chrXII:713147-713637 5.53e-01 100 chrV:492193-492565 2.44e-11 7_[-3(3.93e-05)]_9_[-1(3.42e-10)]_\ 15_[-2(9.08e-07)]_5 chrXV:980129-981065 8.32e-01 100 chrVII:531259-532145 2.61e-02 100 chrXV:168120-168383 1.78e-01 78_[+3(8.82e-05)]_8 chrXIV:417767-418380 8.71e-01 100 chrVII:951394-951732 5.77e-01 100 chrXVI:172759-174105 4.25e-01 100 chrXII:36667-37139 5.70e-02 51_[+3(9.43e-05)]_35 chrIV:117160-118201 2.94e-02 52_[-3(2.67e-05)]_34 chrXII:83934-84334 3.52e-02 33_[+3(1.17e-05)]_53 chrI:138972-139369 2.88e-05 31_[+2(6.92e-09)]_48 chrXV:1025715-1026043 4.37e-01 100 chrXIV:102577-103482 5.45e-01 100 chrIV:578946-580695 8.06e-01 100 chrVII:878323-879017 3.46e-04 63_[-3(3.03e-07)]_23 chrXV:978804-979563 2.38e-01 100 chrX:617713-617813 1.52e-05 30_[+2(8.00e-09)]_49 chrXII:234594-235128 9.19e-01 100 chrXII:780629-781900 3.21e-01 100 chrIII:151047-151523 2.76e-10 21_[+3(5.54e-06)]_[-3(2.47e-05)]_7_\ [-1(9.02e-12)]_15 chrX:354043-354143 1.82e-03 38_[+2(1.33e-06)]_41 chrVII:401408-401620 1.86e-10 6_[-3(1.74e-05)]_50_[-1(2.24e-12)]_\ 1 chrIX:248490-249429 2.15e-03 33_[+3(2.09e-07)]_53 chrXVI:55883-56423 4.38e-01 100 chrXIII:195928-196302 5.08e-07 10_[-1(7.09e-11)]_61 chrIII:177028-178788 9.48e-01 100 chrXII:201655-202680 6.64e-01 100 chrX:292541-292641 8.98e-01 100 chrXIV:725905-726393 6.45e-08 16_[-3(5.88e-07)]_1_[+1(2.77e-08)]_\ 40 chrXIII:362933-363686 8.44e-01 100 chrXV:287783-288560 2.10e-03 70_[+2(1.33e-06)]_9 chrVII:968574-969215 1.31e-03 49_[+3(4.94e-07)]_37 chrXV:976376-976706 9.42e-01 100 chrII:350622-351052 7.22e-05 39_[+2(3.31e-07)]_40 chrXVI:572177-572645 6.65e-01 100 chrX:662555-662655 9.10e-01 100 chrXV:253783-254715 2.94e-02 100 chrVI:19349-19934 4.81e-01 100 chrXIII:222660-223813 8.12e-01 100 chrVIII:379294-380238 2.69e-05 12_[-1(6.24e-07)]_34_[-3(6.77e-05)]_\ 11 chrXII:783841-784578 6.14e-02 100 chrXVI:188324-189278 1.30e-03 77_[+3(3.03e-07)]_9 chrXII:673493-674569 1.11e-01 100 chrII:197279-197855 6.83e-10 13_[+1(1.15e-12)]_58 chrIII:142106-142958 1.32e-01 100 chrII:477027-477785 1.90e-04 14_[-3(2.41e-06)]_48_[+2(7.50e-05)]_\ 3 chrVII:319236-320179 4.80e-01 100 chrIV:1080515-1081022 6.72e-01 100 chrXVI:622296-623156 6.73e-01 100 chrXIII:372194-372668 3.40e-07 71_[-1(2.71e-10)] chrXI:146795-147513 1.29e-01 [-3(4.67e-05)]_86 chrXIV:330741-331633 7.80e-03 43_[+1(5.06e-05)]_28 chrIV:1013405-1013977 9.44e-04 85_[+3(1.23e-06)]_1 chrVIII:388668-389003 8.54e-03 77_[-3(1.06e-05)]_9 chrXV:480049-480882 4.89e-01 100 chrXI:202326-203232 7.34e-01 100 chrV:270384-271110 5.70e-01 100 chrVII:405461-405821 2.48e-01 100 chrXV:300881-301462 1.20e-07 40_[+1(7.09e-11)]_31 chrXVI:828831-829440 6.37e-03 65_[+1(1.21e-06)]_6 chrXIV:602077-602588 1.18e-14 29_[+2(1.16e-09)]_16_[+1(1.15e-12)]_\ 5 chrXIV:662066-662498 4.60e-01 100 chrIX:210659-210960 3.06e-02 48_[+3(8.94e-06)]_38 chrX:90033-90133 3.80e-02 82_[+3(2.67e-05)]_4 chrXVI:39903-40611 4.23e-01 100 chrXV:216278-216701 6.98e-01 100 chrIV:1468820-1469091 9.58e-01 100 chrV:51753-53310 7.30e-01 100 chrVII:648785-649365 1.95e-04 61_[-3(2.82e-06)]_25 chrII:236534-236898 9.01e-01 100 chrV:270069-270227 5.62e-01 100 chrXIV:499171-500863 6.45e-01 100 chrIV:538842-539326 3.72e-01 100 chrXIII:253328-253740 1.94e-02 42_[+3(1.56e-05)]_44 chrV:152217-153272 1.35e-01 100 chrIX:129464-130198 9.62e-01 100 chrIII:137732-138997 5.47e-01 100 chrVII:436717-439837 7.80e-01 100 chrIV:1016963-1017501 1.04e-12 8_[-3(2.22e-06)]_10_[-1(2.24e-12)]_\ 14_[-2(8.55e-05)]_4 chrII:87932-88607 2.65e-01 100 chrVII:609310-610100 9.78e-03 67_[-3(2.41e-06)]_19 chrXIV:240925-242427 8.83e-01 100 chrXV:663486-664117 5.29e-07 68_[-1(2.71e-10)]_3 chrXII:897678-899723 7.56e-01 100 chrIV:433918-434950 5.87e-01 100 chrX:115786-115886 7.14e-02 100 chrXIV:351296-352984 6.49e-01 100 chrIV:392508-393400 3.71e-01 100 chrXIV:783681-784323 8.59e-01 100 chrXIV:758550-760053 1.02e-01 46_[+3(4.67e-05)]_40 chrXIV:426654-427320 1.84e-01 100 chrXII:731427-732327 1.36e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************