******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MSS11/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:350615-351061 1.0000 100 chrVIII:451228-453073 1.0000 100 chrXV:109527-110673 1.0000 100 chrVII:319244-320456 1.0000 100 chrXI:307950-308472 1.0000 100 chrI:166170-166615 1.0000 100 chrIX:25939-27004 1.0000 100 chrXVI:819311-820045 1.0000 100 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chrVII:405463-405859 1.0000 100 chrXVI:75324-76792 1.0000 100 chrVII:738891-739605 1.0000 100 chrV:143427-144125 1.0000 100 chrVII:328385-329175 1.0000 100 chrVII:661490-661945 1.0000 100 chrXIII:302747-303369 1.0000 100 chrXV:287173-288482 1.0000 100 chrVIII:48194-48972 1.0000 100 chrXII:447796-448961 1.0000 100 chrXI:322446-323000 1.0000 100 chrVII:561257-561724 1.0000 100 chrXIII:768164-768445 1.0000 100 chrXV:353889-354325 1.0000 100 chrX:540895-540995 1.0000 100 chrXIII:797635-798244 1.0000 100 chrX:181615-181715 1.0000 100 chrXI:558365-559461 1.0000 100 chrXV:234272-235044 1.0000 100 chrXV:228114-228586 1.0000 100 chrXII:167749-168227 1.0000 100 chrXI:354727-357003 1.0000 100 chrVII:310287-312347 1.0000 100 chrIX:68249-68985 1.0000 100 chrVI:131328-131591 1.0000 100 chrX:651889-651989 1.0000 100 chrXI:513038-513600 1.0000 100 chrII:226968-227358 1.0000 100 chrVI:30233-32343 1.0000 100 chrXIII:650748-653015 1.0000 100 chrX:606195-606295 1.0000 100 chrVII:599384-601061 1.0000 100 chrVII:989203-990725 1.0000 100 chrIII:316209-316591 1.0000 100 chrVIII:555760-556618 1.0000 100 chrXI:107459-110475 1.0000 100 chrII:644934-645444 1.0000 100 chrXV:348838-349341 1.0000 100 chrXII:932060-932543 1.0000 100 chrX:172728-172828 1.0000 100 chrIV:619685-620190 1.0000 100 chrIX:385699-387085 1.0000 100 chrXII:837677-839418 1.0000 100 chrIV:1256792-1257275 1.0000 100 chrXV:29254-30885 1.0000 100 chrVIII:132797-133102 1.0000 100 chrXII:930688-931874 1.0000 100 chrIV:568697-569325 1.0000 100 chrXII:728297-728791 1.0000 100 chrXII:897342-899955 1.0000 100 chrV:207351-208376 1.0000 100 chrIX:388139-389111 1.0000 100 chrXV:232554-232808 1.0000 100 chrXIV:413539-414988 1.0000 100 chrXV:725113-725752 1.0000 100 chrXIV:241378-241785 1.0000 100 chrIII:107144-107825 1.0000 100 chrI:182159-183142 1.0000 100 chrX:120274-120374 1.0000 100 chrV:42139-42472 1.0000 100 chrIII:162108-164289 1.0000 100 chrII:555733-558467 1.0000 100 chrV:460534-462194 1.0000 100 chrXIII:586365-587162 1.0000 100 chrVIII:488387-488782 1.0000 100 chrX:454250-454350 1.0000 100 chrXIII:131578-132100 1.0000 100 chrXI:146945-147431 1.0000 100 chrXIII:549875-553258 1.0000 100 chrV:23528-24016 1.0000 100 chrIX:323605-324389 1.0000 100 chrXVI:431826-434122 1.0000 100 chrXIV:374672-375129 1.0000 100 chrXV:968060-968892 1.0000 100 chrXV:853659-854831 1.0000 100 chrVII:702810-704164 1.0000 100 chrVII:110353-110786 1.0000 100 chrIII:80-606 1.0000 100 chrXV:841451-842936 1.0000 100 chrX:396557-396657 1.0000 100 chrXIII:625869-627195 1.0000 100 chrX:122166-122266 1.0000 100 chrXIV:442733-444822 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MSS11/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MSS11/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MSS11/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.301 C 0.199 G 0.199 T 0.301 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MSS11/background): A 0.307 C 0.193 G 0.193 T 0.307 ******************************************************************************** ******************************************************************************** MOTIF SGGRATCGAACCCVGGAYCYY MEME-1 width = 21 sites = 89 llr = 1425 E-value = 1.6e-253 ******************************************************************************** -------------------------------------------------------------------------------- Motif SGGRATCGAACCCVGGAYCYY MEME-1 Description -------------------------------------------------------------------------------- Simplified A 12165:::aa:113:27:::1 pos.-specific C 3:::1:7:::a7632::6734 probability G 67942::a::::33571:111 matrix T ::::2a3::::21:2:23264 bits 2.4 * * 2.1 * * * 1.9 * * * 1.7 * * **** Relative 1.4 * ****** Entropy 1.2 * ****** * (23.1 bits) 1.0 **** ******* * ** 0.7 **** ******** * *** 0.5 **** *************** 0.2 ********************* 0.0 --------------------- Multilevel GGGAATCGAACCCGGGACCTT consensus CA G T GCTATT CC sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRATCGAACCCVGGAYCYY MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIII:123349-123818 + 54 1.72e-12 GGGGCGAGCC GGGACTCGAACCCGGGACCTC CCGCACCCTA chrXV:853659-854831 + 2 1.02e-10 C CGGAATCGAACCGATGACCTC TTCCTTGCAA chrXII:214720-215071 + 48 1.02e-10 TGGACGCAAC CGGAATCGAACCGATGACCTC TTCCTTGCAA chrXIV:569633-570086 + 68 1.44e-10 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrIV:667758-668248 + 64 1.44e-10 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrXII:1051911-1052225 + 63 1.44e-10 TGGTCTCTAG CGGGATCGAACCGCTGATCCC CGCGTTATTA chrIV:1075259-1075755 + 25 2.01e-10 TGTTCCAACC GAGGATCGAACTCGGGACCTT TGCCGTGTGA chrII:644934-645444 - 69 2.75e-10 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrIX:370215-370642 - 80 2.75e-10 . GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrVII:541710-542162 - 5 2.75e-10 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGG chrIV:1016986-1017513 + 18 2.75e-10 CTCCGAAGCG GGGAGTCGAACCCCGGTCTCC ACGGTGAGAA chrV:176880-177457 - 22 2.75e-10 CTCCGATACG GGGAGTCGAACCCCGGTCTCC ACGGTGAAAG chrVI:226379-226998 + 60 3.24e-10 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrV:435610-436013 + 1 3.24e-10 . GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrXV:464271-464867 - 2 3.24e-10 GGGGCGAGCT GGGAATTGAACCCAGGGCCTC T chrX:414787-414887 - 38 3.24e-10 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrIX:300012-300485 + 40 3.24e-10 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrIII:151121-151525 + 21 3.24e-10 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrXII:92340-92881 - 60 3.24e-10 GGGGCGAGCT GGGAATTGAACCCAGGGCCTC TCGCATGCTT chrXVI:581850-582376 - 41 3.24e-10 AGCCCTGTAG GGGGCTCGAACCCCTAACCTT ATGATTAAGA chrXIII:195931-196307 + 9 3.24e-10 GGCGAGCT GGGAATTGAACCCAGGGCCTC TCGCATGCTT chrVII:779392-779932 - 45 3.77e-10 TGAGCGGTAC GAGAATCGAACCCGTGTCCCC ACCTTGGAAG chrXIV:96006-96464 + 66 3.77e-10 TGAGCGGTAC GAGAATCGAACCCGTGTCCCC ACCTTGGAAG chrXIII:320962-321327 + 63 5.11e-10 TGGACGAGTC CGGAATCGAACCGGAGACCTC TCCCATGCTA chrXI:517785-518269 - 53 5.11e-10 TGGACGAGTC CGGAATCGAACCGGAGACCTC TCCCATGCTA chrVII:774106-774683 - 47 5.11e-10 TGGACGAGTC CGGAATCGAACCGGAGACCTC TCCCATGCTA chrIV:409971-410822 - 75 5.11e-10 GAGTC CGGAATCGAACCGGAGACCTC TCCCATGCTA chrX:396557-396657 + 33 6.85e-10 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrIV:1256792-1257275 + 35 6.85e-10 TGCGGAAGCC GGGAATCGAACCCGGGCCCCA TGCTTGGGAA chrXV:226417-226889 + 18 6.85e-10 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrXVI:860128-860680 - 65 6.85e-10 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrX:531489-531589 - 38 6.85e-10 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrVII:845344-846044 - 45 6.85e-10 TGCGCAAGCC CGGAATCGAACCGGGGGCCCA ACGATGGCAA chrXI:46584-46996 + 5 7.92e-10 CTGT GGGAATTGAACCCACGATCCC CGCATTACGA chrXIII:131578-132100 + 46 2.07e-09 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrVII:828450-828983 + 67 2.07e-09 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrX:374177-374277 + 73 2.07e-09 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTA chrXIII:747645-748153 + 53 2.07e-09 CACTCACGAT GGGGGTCGAACCCATAATCTT CTGATTAGAA chrXV:438452-438995 - 35 3.05e-09 CTCCTCATAG GGGGCTCGAACCCCTGACATT TCGGTATCCT chrIV:488387-489193 + 67 3.05e-09 TGATCCAACC GAGGTTCGAACTCGGGATCTT CGCCGTGTAA chrVII:115331-115730 - 73 3.05e-09 CTCATAG GGGGCTCGAACCCCTGACATT TCGGTATCCT chrII:326401-327150 + 77 3.05e-09 TGATCCAACC GAGGTTCGAACTCGGGATCTT CGC chrIX:174870-175364 - 6 1.01e-08 TGCTTCCAAT CGGATTTGAACCGATGATCTC CACAT chrXIV:374672-375129 - 79 1.13e-08 T GTGGATCGAACACAGGACCTC CAGATGACTT chrXVI:560019-560488 + 5 1.13e-08 TTCT GTGGATCGAACACAGGACCTC CAGATAACTT chrVIII:358263-358784 + 15 1.13e-08 TGCGAATTCT GTGGATCGAACACAGGACCTC CAGATAACTT chrIV:1095134-1095668 + 29 1.13e-08 TGCGAACTCT GTGGATCGAACACAGGACCTC CAGATATCTT chrIV:802568-803005 + 5 1.27e-08 TACC CGGATTCGAACCGGGGTTGTC CGGATCAAAA chrII:350615-351061 - 80 1.27e-08 . CGGATTCGAACCGGGGTTGTC CGGATCAAAA chrV:438481-438966 - 70 1.42e-08 TGATTTCGCC CAGGATCGAACTGGGGACGTT CTGCGTGTTA chrX:378225-378325 - 48 1.42e-08 TGATTTCGCC CAGGATCGAACTGGGGACGTT CTGCGTGTTA chrV:469248-469802 - 25 1.42e-08 TGATTTCGCC CAGGATCGAACTGGGGACGTT CTGCGTGTTA chrV:130820-131401 + 32 1.76e-08 AGGTCTTACC CGGATTCGAACCGGGGTTGTT CGGATCAAAA chrX:422717-422817 - 16 4.03e-08 TGCTCCAGGG GAGGTTCGAACTCTCGACCTT CAGATTATGA chrXIII:572614-573191 + 41 4.03e-08 TGCTCCAGGG GAGGTTCGAACTCTCGACCTT CAGATTATGA chrXV:228114-228586 - 74 5.41e-08 CCCAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrVII:730965-731430 - 33 5.41e-08 CGACCCCAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrXI:74414-74880 - 70 5.41e-08 CGACCCCAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrXIV:632416-632911 - 29 5.41e-08 CGACCCCAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrXII:975763-976197 + 63 5.41e-08 CGACCCCAGT GAGGGTTGAACTCACGATCTT GCGATTAACA chrX:233730-233830 - 73 7.90e-08 CCCCGCC AGGACTCGAACCTGGAATCTT CTGGTTCGTA chrXI:302707-303232 - 74 1.36e-07 ACGGAC AGGAATTGAACCTGCAACCCT TCGATTGCAA chrXIII:379047-379608 + 36 1.36e-07 TGAAACGGAC AGGAATTGAACCTGCAACCCT TCGATTGCAA chrX:415662-415762 + 49 1.36e-07 TGAAACGGAC AGGAATTGAACCTGCAACCCT TCGATTGCAA chrIV:568697-569325 - 44 1.48e-07 CTCCGCGACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrXI:513038-513600 + 73 1.48e-07 CTCCGCGACG GGGAATTGAACCCCGATCTGG CACGCGA chrXII:426904-427438 - 52 1.48e-07 CTCCGCGACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrX:204549-204649 - 23 1.48e-07 CTCCGCGACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrXIII:463290-463895 - 53 1.48e-07 CTCCGCGACG GGGAATTGAACCCCGATCTGG CACGCGACAA chrX:355186-355286 - 78 1.48e-07 CG GGGAATTGAACCCCGATCTGG CACGCGACAA chrVI:210326-210923 + 55 1.61e-07 TCTCCCGGGG GCGAGTCGAACGCCCGATCTC AAGATTTCGT chrIV:946147-946633 - 30 1.61e-07 TCTCCCGGGG GCGAGTCGAACGCCCGATCTC AAGATTTCGT chrXVI:744068-744576 - 53 1.76e-07 TGCCACCTGT CAGAATTGAACTAACGACCTT TGCATTACAA chrVII:1004027-1004461 - 63 1.76e-07 TGCCACCTGT CAGAATTGAACTAACGACCTT TGCATTACAA chrXI:490735-491355 - 15 2.67e-07 CTTCCCCGCC AGGACTTGAACCTGGAATCTT CTGGTTCGTA chrIV:519652-519969 + 43 4.28e-07 GTTGTCCGCG CGAGTTCGAACCTCGCATCCT TCAATAACTT chrXIV:725740-726582 - 26 4.28e-07 GTTGTCCGCG CGAGTTCGAACCTCGCATCCT TCAGTATTTT chrII:9450-9869 + 34 4.28e-07 GTTGTCCGCG CGAGTTCGAACCTCGCATCCT TCAGTATTTT chrII:347400-347944 + 41 4.28e-07 GTTGTCCGCG CGAGTTCGAACCTCGCATCCT TCAGTAATAT chrXVI:435638-436181 + 44 6.23e-07 AGCTCGCACT CAGGATCGAACTAAGGACCAA CAGATTTGCA chrII:642838-643250 + 23 6.23e-07 AGCTCGCACT CAGGATCGAACTAAGGACCAA CAGATTTGCA chrVIII:62530-63069 - 47 1.26e-06 TGCCATCTCC TAGAATCGAACCAGGGTTTCA TCGGCCACAA chrXIII:362932-363376 - 1 1.26e-06 TGCCATCTCC TAGAATCGAACCAGGGTTTCA chrVII:319244-320456 - 22 1.26e-06 TGCCATCTCC TAGAATCGAACCAGGGTTTCA TCGGCCACAA chrX:517643-517743 + 6 1.74e-06 CCGCT CGGTTTCGATCCGAGGACATC AGGGTTATGA chrX:617701-617801 - 69 1.74e-06 TGAGAGCTAA GGGATTCGAACCCTTGCATCC GAAGATATCA chrXII:592333-592822 + 2 1.74e-06 A GGGATTCGAACCCTTGCATCC GAAGATATCA chrIII:149738-150226 - 29 1.74e-06 TAGCGCCGCT CGGTTTCGATCCGAGGACATC AGGGTTATGA chrXIV:413539-414988 - 13 2.08e-05 ACATTCTGTT TGAATTTGAACAGCCAATTCT CTAGTTGGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRATCGAACCCVGGAYCYY MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123349-123818 1.7e-12 53_[+1]_26 chrXV:853659-854831 1e-10 1_[+1]_78 chrXII:214720-215071 1e-10 47_[+1]_32 chrXIV:569633-570086 1.4e-10 67_[+1]_12 chrIV:667758-668248 1.4e-10 63_[+1]_16 chrXII:1051911-1052225 1.4e-10 62_[+1]_17 chrIV:1075259-1075755 2e-10 24_[+1]_55 chrII:644934-645444 2.8e-10 68_[-1]_11 chrIX:370215-370642 2.8e-10 79_[-1] chrVII:541710-542162 2.8e-10 4_[-1]_75 chrIV:1016986-1017513 2.8e-10 17_[+1]_62 chrV:176880-177457 2.8e-10 21_[-1]_58 chrVI:226379-226998 3.2e-10 59_[+1]_20 chrV:435610-436013 3.2e-10 [+1]_79 chrXV:464271-464867 3.2e-10 1_[-1]_78 chrX:414787-414887 3.2e-10 37_[-1]_42 chrIX:300012-300485 3.2e-10 39_[+1]_40 chrIII:151121-151525 3.2e-10 20_[+1]_59 chrXII:92340-92881 3.2e-10 59_[-1]_20 chrXVI:581850-582376 3.2e-10 40_[-1]_39 chrXIII:195931-196307 3.2e-10 8_[+1]_71 chrVII:779392-779932 3.8e-10 44_[-1]_35 chrXIV:96006-96464 3.8e-10 65_[+1]_14 chrXIII:320962-321327 5.1e-10 62_[+1]_17 chrXI:517785-518269 5.1e-10 52_[-1]_27 chrVII:774106-774683 5.1e-10 46_[-1]_33 chrIV:409971-410822 5.1e-10 74_[-1]_5 chrX:396557-396657 6.9e-10 32_[+1]_47 chrIV:1256792-1257275 6.9e-10 34_[+1]_45 chrXV:226417-226889 6.9e-10 17_[+1]_62 chrXVI:860128-860680 6.9e-10 64_[-1]_15 chrX:531489-531589 6.9e-10 37_[-1]_42 chrVII:845344-846044 6.9e-10 44_[-1]_35 chrXI:46584-46996 7.9e-10 4_[+1]_75 chrXIII:131578-132100 2.1e-09 45_[+1]_34 chrVII:828450-828983 2.1e-09 66_[+1]_13 chrX:374177-374277 2.1e-09 72_[+1]_7 chrXIII:747645-748153 2.1e-09 52_[+1]_27 chrXV:438452-438995 3.1e-09 34_[-1]_45 chrIV:488387-489193 3.1e-09 66_[+1]_13 chrVII:115331-115730 3.1e-09 72_[-1]_7 chrII:326401-327150 3.1e-09 76_[+1]_3 chrIX:174870-175364 1e-08 5_[-1]_74 chrXIV:374672-375129 1.1e-08 78_[-1]_1 chrXVI:560019-560488 1.1e-08 4_[+1]_75 chrVIII:358263-358784 1.1e-08 14_[+1]_65 chrIV:1095134-1095668 1.1e-08 28_[+1]_51 chrIV:802568-803005 1.3e-08 4_[+1]_75 chrII:350615-351061 1.3e-08 79_[-1] chrV:438481-438966 1.4e-08 69_[-1]_10 chrX:378225-378325 1.4e-08 47_[-1]_32 chrV:469248-469802 1.4e-08 24_[-1]_55 chrV:130820-131401 1.8e-08 31_[+1]_48 chrX:422717-422817 4e-08 15_[-1]_64 chrXIII:572614-573191 4e-08 40_[+1]_39 chrXV:228114-228586 5.4e-08 73_[-1]_6 chrVII:730965-731430 5.4e-08 32_[-1]_47 chrXI:74414-74880 5.4e-08 69_[-1]_10 chrXIV:632416-632911 5.4e-08 28_[-1]_51 chrXII:975763-976197 5.4e-08 62_[+1]_17 chrX:233730-233830 7.9e-08 72_[-1]_7 chrXI:302707-303232 1.4e-07 73_[-1]_6 chrXIII:379047-379608 1.4e-07 35_[+1]_44 chrX:415662-415762 1.4e-07 48_[+1]_31 chrIV:568697-569325 1.5e-07 43_[-1]_36 chrXI:513038-513600 1.5e-07 72_[+1]_7 chrXII:426904-427438 1.5e-07 51_[-1]_28 chrX:204549-204649 1.5e-07 22_[-1]_57 chrXIII:463290-463895 1.5e-07 52_[-1]_27 chrX:355186-355286 1.5e-07 77_[-1]_2 chrVI:210326-210923 1.6e-07 54_[+1]_25 chrIV:946147-946633 1.6e-07 29_[-1]_50 chrXVI:744068-744576 1.8e-07 52_[-1]_27 chrVII:1004027-1004461 1.8e-07 62_[-1]_17 chrXI:490735-491355 2.7e-07 14_[-1]_65 chrIV:519652-519969 4.3e-07 42_[+1]_37 chrXIV:725740-726582 4.3e-07 25_[-1]_54 chrII:9450-9869 4.3e-07 33_[+1]_46 chrII:347400-347944 4.3e-07 40_[+1]_39 chrXVI:435638-436181 6.2e-07 43_[+1]_36 chrII:642838-643250 6.2e-07 22_[+1]_57 chrVIII:62530-63069 1.3e-06 46_[-1]_33 chrXIII:362932-363376 1.3e-06 [-1]_79 chrVII:319244-320456 1.3e-06 21_[-1]_58 chrX:517643-517743 1.7e-06 5_[+1]_74 chrX:617701-617801 1.7e-06 68_[-1]_11 chrXII:592333-592822 1.7e-06 1_[+1]_78 chrIII:149738-150226 1.7e-06 28_[-1]_51 chrXIV:413539-414988 2.1e-05 12_[-1]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRATCGAACCCVGGAYCYY MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SGGRATCGAACCCVGGAYCYY width=21 seqs=89 chrIII:123349-123818 ( 54) GGGACTCGAACCCGGGACCTC 1 chrXV:853659-854831 ( 2) CGGAATCGAACCGATGACCTC 1 chrXII:214720-215071 ( 48) CGGAATCGAACCGATGACCTC 1 chrXIV:569633-570086 ( 68) CGGGATCGAACCGCTGATCCC 1 chrIV:667758-668248 ( 64) CGGGATCGAACCGCTGATCCC 1 chrXII:1051911-1052225 ( 63) CGGGATCGAACCGCTGATCCC 1 chrIV:1075259-1075755 ( 25) GAGGATCGAACTCGGGACCTT 1 chrII:644934-645444 ( 69) GGGAGTCGAACCCCGGTCTCC 1 chrIX:370215-370642 ( 80) GGGAGTCGAACCCCGGTCTCC 1 chrVII:541710-542162 ( 5) GGGAGTCGAACCCCGGTCTCC 1 chrIV:1016986-1017513 ( 18) GGGAGTCGAACCCCGGTCTCC 1 chrV:176880-177457 ( 22) GGGAGTCGAACCCCGGTCTCC 1 chrVI:226379-226998 ( 60) GGGGCTCGAACCCCTAACCTT 1 chrV:435610-436013 ( 1) GGGGCTCGAACCCCTAACCTT 1 chrXV:464271-464867 ( 2) GGGAATTGAACCCAGGGCCTC 1 chrX:414787-414887 ( 38) GGGGCTCGAACCCCTAACCTT 1 chrIX:300012-300485 ( 40) GGGGCTCGAACCCCTAACCTT 1 chrIII:151121-151525 ( 21) GGGGCTCGAACCCCTAACCTT 1 chrXII:92340-92881 ( 60) GGGAATTGAACCCAGGGCCTC 1 chrXVI:581850-582376 ( 41) GGGGCTCGAACCCCTAACCTT 1 chrXIII:195931-196307 ( 9) GGGAATTGAACCCAGGGCCTC 1 chrVII:779392-779932 ( 45) GAGAATCGAACCCGTGTCCCC 1 chrXIV:96006-96464 ( 66) GAGAATCGAACCCGTGTCCCC 1 chrXIII:320962-321327 ( 63) CGGAATCGAACCGGAGACCTC 1 chrXI:517785-518269 ( 53) CGGAATCGAACCGGAGACCTC 1 chrVII:774106-774683 ( 47) CGGAATCGAACCGGAGACCTC 1 chrIV:409971-410822 ( 75) CGGAATCGAACCGGAGACCTC 1 chrX:396557-396657 ( 33) CGGAATCGAACCGGGGGCCCA 1 chrIV:1256792-1257275 ( 35) GGGAATCGAACCCGGGCCCCA 1 chrXV:226417-226889 ( 18) CGGAATCGAACCGGGGGCCCA 1 chrXVI:860128-860680 ( 65) CGGAATCGAACCGGGGGCCCA 1 chrX:531489-531589 ( 38) CGGAATCGAACCGGGGGCCCA 1 chrVII:845344-846044 ( 45) CGGAATCGAACCGGGGGCCCA 1 chrXI:46584-46996 ( 5) GGGAATTGAACCCACGATCCC 1 chrXIII:131578-132100 ( 46) GGGGGTCGAACCCATAATCTT 1 chrVII:828450-828983 ( 67) GGGGGTCGAACCCATAATCTT 1 chrX:374177-374277 ( 73) GGGGGTCGAACCCATAATCTT 1 chrXIII:747645-748153 ( 53) GGGGGTCGAACCCATAATCTT 1 chrXV:438452-438995 ( 35) GGGGCTCGAACCCCTGACATT 1 chrIV:488387-489193 ( 67) GAGGTTCGAACTCGGGATCTT 1 chrVII:115331-115730 ( 73) GGGGCTCGAACCCCTGACATT 1 chrII:326401-327150 ( 77) GAGGTTCGAACTCGGGATCTT 1 chrIX:174870-175364 ( 6) CGGATTTGAACCGATGATCTC 1 chrXIV:374672-375129 ( 79) GTGGATCGAACACAGGACCTC 1 chrXVI:560019-560488 ( 5) GTGGATCGAACACAGGACCTC 1 chrVIII:358263-358784 ( 15) GTGGATCGAACACAGGACCTC 1 chrIV:1095134-1095668 ( 29) GTGGATCGAACACAGGACCTC 1 chrIV:802568-803005 ( 5) CGGATTCGAACCGGGGTTGTC 1 chrII:350615-351061 ( 80) CGGATTCGAACCGGGGTTGTC 1 chrV:438481-438966 ( 70) CAGGATCGAACTGGGGACGTT 1 chrX:378225-378325 ( 48) CAGGATCGAACTGGGGACGTT 1 chrV:469248-469802 ( 25) CAGGATCGAACTGGGGACGTT 1 chrV:130820-131401 ( 32) CGGATTCGAACCGGGGTTGTT 1 chrX:422717-422817 ( 16) GAGGTTCGAACTCTCGACCTT 1 chrXIII:572614-573191 ( 41) GAGGTTCGAACTCTCGACCTT 1 chrXV:228114-228586 ( 74) GAGGGTTGAACTCACGATCTT 1 chrVII:730965-731430 ( 33) GAGGGTTGAACTCACGATCTT 1 chrXI:74414-74880 ( 70) GAGGGTTGAACTCACGATCTT 1 chrXIV:632416-632911 ( 29) GAGGGTTGAACTCACGATCTT 1 chrXII:975763-976197 ( 63) GAGGGTTGAACTCACGATCTT 1 chrX:233730-233830 ( 73) AGGACTCGAACCTGGAATCTT 1 chrXI:302707-303232 ( 74) AGGAATTGAACCTGCAACCCT 1 chrXIII:379047-379608 ( 36) AGGAATTGAACCTGCAACCCT 1 chrX:415662-415762 ( 49) AGGAATTGAACCTGCAACCCT 1 chrIV:568697-569325 ( 44) GGGAATTGAACCCCGATCTGG 1 chrXI:513038-513600 ( 73) GGGAATTGAACCCCGATCTGG 1 chrXII:426904-427438 ( 52) GGGAATTGAACCCCGATCTGG 1 chrX:204549-204649 ( 23) GGGAATTGAACCCCGATCTGG 1 chrXIII:463290-463895 ( 53) GGGAATTGAACCCCGATCTGG 1 chrX:355186-355286 ( 78) GGGAATTGAACCCCGATCTGG 1 chrVI:210326-210923 ( 55) GCGAGTCGAACGCCCGATCTC 1 chrIV:946147-946633 ( 30) GCGAGTCGAACGCCCGATCTC 1 chrXVI:744068-744576 ( 53) CAGAATTGAACTAACGACCTT 1 chrVII:1004027-1004461 ( 63) CAGAATTGAACTAACGACCTT 1 chrXI:490735-491355 ( 15) AGGACTTGAACCTGGAATCTT 1 chrIV:519652-519969 ( 43) CGAGTTCGAACCTCGCATCCT 1 chrXIV:725740-726582 ( 26) CGAGTTCGAACCTCGCATCCT 1 chrII:9450-9869 ( 34) CGAGTTCGAACCTCGCATCCT 1 chrII:347400-347944 ( 41) CGAGTTCGAACCTCGCATCCT 1 chrXVI:435638-436181 ( 44) CAGGATCGAACTAAGGACCAA 1 chrII:642838-643250 ( 23) CAGGATCGAACTAAGGACCAA 1 chrVIII:62530-63069 ( 47) TAGAATCGAACCAGGGTTTCA 1 chrXIII:362932-363376 ( 1) TAGAATCGAACCAGGGTTTCA 1 chrVII:319244-320456 ( 22) TAGAATCGAACCAGGGTTTCA 1 chrX:517643-517743 ( 6) CGGTTTCGATCCGAGGACATC 1 chrX:617701-617801 ( 69) GGGATTCGAACCCTTGCATCC 1 chrXII:592333-592822 ( 2) GGGATTCGAACCCTTGCATCC 1 chrIII:149738-150226 ( 29) CGGTTTCGATCCGAGGACATC 1 chrXIV:413539-414988 ( 13) TGAATTTGAACAGCCAATTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRATCGAACCCVGGAYCYY MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 10.9531 E= 1.6e-253 -245 85 152 -277 -31 -310 183 -277 -245 -1312 229 -1312 84 -1312 115 -377 72 -64 -10 -69 -1312 -1312 -1312 170 -1312 194 -1312 -25 -1312 -1312 238 -1312 170 -1312 -1312 -1312 167 -1312 -1312 -377 -1312 238 -1312 -1312 -245 192 -310 -69 -197 152 49 -160 -7 76 81 -277 -277 -10 146 -31 -31 -210 188 -1312 111 -251 -110 -53 -377 171 -1312 18 -277 185 -151 -69 -377 81 -151 90 -131 99 -151 47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRATCGAACCCVGGAYCYY MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 89 E= 1.6e-253 0.056180 0.348315 0.550562 0.044944 0.247191 0.022472 0.685393 0.044944 0.056180 0.000000 0.943820 0.000000 0.550562 0.000000 0.426966 0.022472 0.505618 0.123596 0.179775 0.191011 0.000000 0.000000 0.000000 1.000000 0.000000 0.741573 0.000000 0.258427 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.977528 0.000000 0.000000 0.022472 0.000000 1.000000 0.000000 0.000000 0.056180 0.730337 0.022472 0.191011 0.078652 0.550562 0.269663 0.101124 0.292135 0.325843 0.337079 0.044944 0.044944 0.179775 0.528090 0.247191 0.247191 0.044944 0.707865 0.000000 0.662921 0.033708 0.089888 0.213483 0.022472 0.629213 0.000000 0.348315 0.044944 0.696629 0.067416 0.191011 0.022472 0.337079 0.067416 0.573034 0.123596 0.382022 0.067416 0.426966 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGGRATCGAACCCVGGAYCYY MEME-1 regular expression -------------------------------------------------------------------------------- [GC][GA]G[AG]AT[CT]GAACC[CG][GCA][GT][GA][AT][CT]C[TC][TC] -------------------------------------------------------------------------------- Time 352.96 secs. ******************************************************************************** ******************************************************************************** MOTIF CGCKYTACCVACTGGGCCAMV MEME-2 width = 21 sites = 46 llr = 808 E-value = 1.8e-129 ******************************************************************************** -------------------------------------------------------------------------------- Motif CGCKYTACCVACTGGGCCAMV MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::11382:5a::221::a53 pos.-specific C 73925:18a2:8:22:a7:32 probability G 37:21:1::3:::459::::4 matrix T ::1547:::::2a2:::3:2: bits 2.4 * * 2.1 * * 1.9 * * ** 1.7 * * * * ** * Relative 1.4 *** ** *** **** Entropy 1.2 *** ** *** **** (25.3 bits) 1.0 *** ** *** **** 0.7 *** **** *** ***** 0.5 *** ********* ******* 0.2 ********************* 0.0 --------------------- Multilevel CGCTCTACCAACTGGGCCAAG consensus GC GTA A G C T CA sequence C C A C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCKYTACCVACTGGGCCAMV MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXV:853659-854831 + 39 2.68e-11 GCAAGGGAAG CGCGCTACCAACTGCGCCATG TGCCCTGATG chrXII:656829-657220 + 7 1.59e-10 AGGGAG CGCGCTACCGACTACGCCACA CGCCCAATTT chrXI:219694-220114 - 46 1.59e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCTATTT chrXII:734599-735028 - 44 1.59e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCAAACT chrXI:517785-518269 - 16 1.59e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCATAGT chrVII:774106-774683 - 10 1.59e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCAATT chrIV:409971-410822 - 38 1.59e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCAATAT chrXIV:602056-602580 - 49 1.59e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCATTGT chrXII:875034-875682 - 73 2.49e-10 AGCCGAA CGCTCTACCAACTGAGCTAAC AAGGATGAGT chrVII:115331-115730 - 13 2.49e-10 AAAAGCCGAA CGCTCTACCAACTGAGCTAAC AAGGATGAGT chrXII:167749-168227 + 62 3.32e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCATATG chrIV:1305406-1305860 - 52 3.32e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCTTAAT chrXIII:258973-259441 + 57 3.32e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCATACT chrIV:437543-438104 - 4 3.32e-10 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTG chrV:435610-436013 + 38 4.40e-10 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTCTTA chrX:414787-414887 - 1 4.40e-10 AAGAGTCATA CGCGCTACCGATTGCGCCAAC chrIX:300012-300485 + 77 4.40e-10 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAG chrIII:151121-151525 + 58 4.40e-10 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTCTTT chrXVI:581850-582376 - 4 4.40e-10 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAG chrXV:353889-354325 + 31 5.04e-10 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCAGTAA chrIV:433728-434948 + 23 5.04e-10 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTTCTG chrX:58993-59093 + 13 5.04e-10 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTTCTA chrXIV:374672-375129 - 24 7.41e-10 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAG TCCGCTTATT chrXVI:560019-560488 + 61 1.71e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTCAAT chrII:36244-36607 - 28 1.71e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTACA chrVI:157847-158202 + 8 1.71e-09 AGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTCTA chrVIII:237748-238121 + 30 1.71e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTACT chrVIII:358263-358784 + 71 1.71e-09 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTAC chrXV:228114-228586 - 36 2.94e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTAATA chrXI:74414-74880 - 32 2.94e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTAATT chrIII:127502-127911 - 65 2.94e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCATTTT chrIV:1150714-1151195 + 12 6.47e-09 TAGCAGGCAT CGCCTTAACCACTCGGCCACT GGGACTGAAA chrX:617701-617801 - 4 8.52e-09 TAAATCTGAC GCCTTAAACCACTCGGCCAAA CTC chrXII:592333-592822 + 67 8.52e-09 TAAATCTGAC GCCTTAAACCACTCGGCCAAA CTCCCATTGT chrX:233730-233830 - 36 3.16e-08 CGTAGCCAGA CGCCGTGACCATTGGGCCACG AGGAACAAGA chrXV:340122-340632 + 19 3.16e-08 CGTAGCCAGA CGCCGTGACCATTGGGCCACG AGGAACAGAT chrXII:962811-963276 + 37 3.66e-08 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC CCTCCGTCGA chrV:438481-438966 - 32 6.83e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTAATT chrX:378225-378325 - 10 6.83e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTATT chrXI:307950-308472 + 31 6.83e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCACTTA chrX:354017-354117 - 39 1.27e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTGATA chrX:542774-542874 + 50 1.27e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTATTT chrXIII:168209-169374 - 59 1.27e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTGACT chrX:360285-360385 + 13 2.48e-07 AAAACACACA GGCTGTACCAACCGACCCAAG TGGAGATTTC chrXIII:572614-573191 + 78 3.69e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTACT GA chrIX:25939-27004 + 50 5.57e-07 CGTGCAGAAC GGCACAAACCAATAGGCTATG ACCAAAAAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCKYTACCVACTGGGCCAMV MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:853659-854831 2.7e-11 38_[+2]_41 chrXII:656829-657220 1.6e-10 6_[+2]_73 chrXI:219694-220114 1.6e-10 45_[-2]_34 chrXII:734599-735028 1.6e-10 43_[-2]_36 chrXI:517785-518269 1.6e-10 15_[-2]_64 chrVII:774106-774683 1.6e-10 9_[-2]_70 chrIV:409971-410822 1.6e-10 37_[-2]_42 chrXIV:602056-602580 1.6e-10 48_[-2]_31 chrXII:875034-875682 2.5e-10 72_[-2]_7 chrVII:115331-115730 2.5e-10 12_[-2]_67 chrXII:167749-168227 3.3e-10 61_[+2]_18 chrIV:1305406-1305860 3.3e-10 51_[-2]_28 chrXIII:258973-259441 3.3e-10 56_[+2]_23 chrIV:437543-438104 3.3e-10 3_[-2]_76 chrV:435610-436013 4.4e-10 37_[+2]_42 chrX:414787-414887 4.4e-10 [-2]_79 chrIX:300012-300485 4.4e-10 76_[+2]_3 chrIII:151121-151525 4.4e-10 57_[+2]_22 chrXVI:581850-582376 4.4e-10 3_[-2]_76 chrXV:353889-354325 5e-10 30_[+2]_49 chrIV:433728-434948 5e-10 22_[+2]_57 chrX:58993-59093 5e-10 12_[+2]_67 chrXIV:374672-375129 7.4e-10 23_[-2]_56 chrXVI:560019-560488 1.7e-09 60_[+2]_19 chrII:36244-36607 1.7e-09 27_[-2]_52 chrVI:157847-158202 1.7e-09 7_[+2]_72 chrVIII:237748-238121 1.7e-09 29_[+2]_50 chrVIII:358263-358784 1.7e-09 70_[+2]_9 chrXV:228114-228586 2.9e-09 35_[-2]_44 chrXI:74414-74880 2.9e-09 31_[-2]_48 chrIII:127502-127911 2.9e-09 64_[-2]_15 chrIV:1150714-1151195 6.5e-09 11_[+2]_68 chrX:617701-617801 8.5e-09 3_[-2]_76 chrXII:592333-592822 8.5e-09 66_[+2]_13 chrX:233730-233830 3.2e-08 35_[-2]_44 chrXV:340122-340632 3.2e-08 18_[+2]_61 chrXII:962811-963276 3.7e-08 36_[+2]_43 chrV:438481-438966 6.8e-08 31_[-2]_48 chrX:378225-378325 6.8e-08 9_[-2]_70 chrXI:307950-308472 6.8e-08 30_[+2]_49 chrX:354017-354117 1.3e-07 38_[-2]_41 chrX:542774-542874 1.3e-07 49_[+2]_30 chrXIII:168209-169374 1.3e-07 58_[-2]_21 chrX:360285-360385 2.5e-07 12_[+2]_67 chrXIII:572614-573191 3.7e-07 77_[+2]_2 chrIX:25939-27004 5.6e-07 49_[+2]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCKYTACCVACTGGGCCAMV MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CGCKYTACCVACTGGGCCAMV width=21 seqs=46 chrXV:853659-854831 ( 39) CGCGCTACCAACTGCGCCATG 1 chrXII:656829-657220 ( 7) CGCGCTACCGACTACGCCACA 1 chrXI:219694-220114 ( 46) CGCGCTACCGACTACGCCACA 1 chrXII:734599-735028 ( 44) GCCTTAACCAACTGGGCCAAG 1 chrXI:517785-518269 ( 16) CGCGCTACCGACTACGCCACA 1 chrVII:774106-774683 ( 10) CGCGCTACCGACTACGCCACA 1 chrIV:409971-410822 ( 38) CGCGCTACCGACTACGCCACA 1 chrXIV:602056-602580 ( 49) GCCTTAACCAACTGGGCCAAG 1 chrXII:875034-875682 ( 73) CGCTCTACCAACTGAGCTAAC 1 chrVII:115331-115730 ( 13) CGCTCTACCAACTGAGCTAAC 1 chrXII:167749-168227 ( 62) CGCCTTAACCACTCGGCCAAG 1 chrIV:1305406-1305860 ( 52) CGCCTTAACCACTCGGCCAAG 1 chrXIII:258973-259441 ( 57) CGCCTTAACCACTCGGCCAAG 1 chrIV:437543-438104 ( 4) CGCCTTAACCACTCGGCCAAG 1 chrV:435610-436013 ( 38) CGCGCTACCGATTGCGCCAAC 1 chrX:414787-414887 ( 1) CGCGCTACCGATTGCGCCAAC 1 chrIX:300012-300485 ( 77) CGCGCTACCGATTGCGCCAAC 1 chrIII:151121-151525 ( 58) CGCGCTACCGATTGCGCCAAC 1 chrXVI:581850-582376 ( 4) CGCGCTACCGATTGCGCCAAC 1 chrXV:353889-354325 ( 31) CGCCTTACCAACTTGGCCATA 1 chrIV:433728-434948 ( 23) CGCCTTACCAACTTGGCCATA 1 chrX:58993-59093 ( 13) CGCCTTACCAACTTGGCCATA 1 chrXIV:374672-375129 ( 24) CGCTCTCCCAACTGAGCTAAG 1 chrXVI:560019-560488 ( 61) CGCTCTCCCAACTGAGCTAAA 1 chrII:36244-36607 ( 28) CGCTCTCCCAACTGAGCTAAA 1 chrVI:157847-158202 ( 8) CGCTCTCCCAACTGAGCTAAA 1 chrVIII:237748-238121 ( 30) CGCTCTCCCAACTGAGCTAAA 1 chrVIII:358263-358784 ( 71) CGCTCTCCCAACTGAGCTAAA 1 chrXV:228114-228586 ( 36) GCCTTAACCAACTTGGCCATG 1 chrXI:74414-74880 ( 32) GCCTTAACCAACTTGGCCATG 1 chrIII:127502-127911 ( 65) GCCTTAACCAACTTGGCCATG 1 chrIV:1150714-1151195 ( 12) CGCCTTAACCACTCGGCCACT 1 chrX:617701-617801 ( 4) GCCTTAAACCACTCGGCCAAA 1 chrXII:592333-592822 ( 67) GCCTTAAACCACTCGGCCAAA 1 chrX:233730-233830 ( 36) CGCCGTGACCATTGGGCCACG 1 chrXV:340122-340632 ( 19) CGCCGTGACCATTGGGCCACG 1 chrXII:962811-963276 ( 37) GCCTTAGACCACTCGGCCAAC 1 chrV:438481-438966 ( 32) GCCATAACCGACTAGACCACG 1 chrX:378225-378325 ( 10) GCCATAACCGACTAGACCACG 1 chrXI:307950-308472 ( 31) GCCATAACCGACTAGACCACG 1 chrX:354017-354117 ( 39) CCTTAAACCAACTTGGCTACC 1 chrX:542774-542874 ( 50) CCTTAAACCAACTTGGCTACC 1 chrXIII:168209-169374 ( 59) CCTTAAACCAACTTGGCTACC 1 chrX:360285-360385 ( 13) GGCTGTACCAACCGACCCAAG 1 chrXIII:572614-573191 ( 78) CGCTCTTCCTACTGAGCTACT 1 chrIX:25939-27004 ( 50) GGCACAAACCAATAGGCTATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCKYTACCVACTGGGCCAMV MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 10.4287 E= 1.8e-129 -1217 190 55 -1217 -1217 66 185 -1217 -1217 228 -1217 -224 -182 17 31 57 -224 124 -156 43 9 -1217 -1217 113 135 -56 -156 -382 -36 198 -1217 -1217 -1217 238 -1217 -1217 57 31 55 -382 170 -1217 -1217 -1217 -382 210 -1217 -101 -1217 -314 -1217 167 -65 -15 117 -65 -50 31 150 -1217 -224 -314 224 -1217 -1217 238 -1217 -1217 -1217 190 -1217 -12 170 -1217 -1217 -1217 70 76 -1217 -82 9 31 102 -282 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCKYTACCVACTGGGCCAMV MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 46 E= 1.8e-129 0.000000 0.717391 0.282609 0.000000 0.000000 0.304348 0.695652 0.000000 0.000000 0.934783 0.000000 0.065217 0.086957 0.217391 0.239130 0.456522 0.065217 0.456522 0.065217 0.413043 0.326087 0.000000 0.000000 0.673913 0.782609 0.130435 0.065217 0.021739 0.239130 0.760870 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.456522 0.239130 0.282609 0.021739 1.000000 0.000000 0.000000 0.000000 0.021739 0.826087 0.000000 0.152174 0.000000 0.021739 0.000000 0.978261 0.195652 0.173913 0.434783 0.195652 0.217391 0.239130 0.543478 0.000000 0.065217 0.021739 0.913043 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.717391 0.000000 0.282609 1.000000 0.000000 0.000000 0.000000 0.500000 0.326087 0.000000 0.173913 0.326087 0.239130 0.391304 0.043478 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCKYTACCVACTGGGCCAMV MEME-2 regular expression -------------------------------------------------------------------------------- [CG][GC]C[TGC][CT][TA]A[CA]C[AGC]ACTG[GCA]GC[CT]A[AC][GAC] -------------------------------------------------------------------------------- Time 668.62 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGAYTTRARATCTGTTGGRCKKTKSYCSS MEME-3 width = 30 sites = 12 llr = 356 E-value = 1.6e-048 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGAYTTRARATCTGTTGGRCKKTKSYCSS MEME-3 Description -------------------------------------------------------------------------------- Simplified A 3a:a::3486a::::::::4::2::2:::: pos.-specific C 8:::6:::2:::a::2::2:a:22246846 probability G ::a::::6:4::::8::a86:44:44::64 matrix T ::::4a8::::a:a38a::::6384:42:: bits 2.4 * * * * 2.1 * * * * 1.9 * * * * 1.7 *** * **** *** * * Relative 1.4 **** * ***** *** * *** Entropy 1.2 ****** ** *********** * **** (42.8 bits) 1.0 ********************** * **** 0.7 ********************** ******* 0.5 ********************** ******* 0.2 ****************************** 0.0 ------------------------------ Multilevel CAGACTTGAAATCTGTTGGGCTGTGCCCGC consensus A T AA G T A GT TGT CG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAYTTRARATCTGTTGGRCKKTKSYCSS MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrXVI:689395-689857 + 16 2.54e-17 GTTAAGGCGA CAGACTTGAAATCTGTTGGGCTCTGCCCGC GCTGGTTCAA chrV:288134-288772 - 65 2.54e-17 AGGCGA CAGACTTGAAATCTGTTGGGCTCTGCCCGC GCTGGTTCAA chrIV:519652-519969 + 11 2.33e-15 TCTAAGGCGG CAGACTTAAGATCTGTTGGACGGTTGTCCG CGCGAGTTCG chrXII:962811-963276 - 5 2.33e-15 TCTAAGGCGG CAGACTTAAGATCTGTTGGACGGTTGTCCG CGCG chrXIV:725740-726582 - 49 2.33e-15 TCTAAGGCGG CAGACTTAAGATCTGTTGGACGGTTGTCCG CGCGAGTTCG chrII:9450-9869 + 2 2.33e-15 G CAGACTTAAGATCTGTTGGACGGTTGTCCG CGCGAGTTCG chrII:347400-347944 + 9 2.33e-15 TAAGGCGG CAGACTTAAGATCTGTTGGACGGTTGTCCG CGCGAGTTCG chrXII:167749-168227 - 31 6.49e-14 GTTAAGGCGA AAGATTAGAAATCTTTTGGGCTTTGCCCGC GCAGGTTCGA chrXIII:258973-259441 - 26 6.49e-14 GTTAAGGCGA AAGATTAGAAATCTTTTGGGCTTTGCCCGC GCAGGTTCGA chrIV:437543-438104 + 26 6.49e-14 GTTAAGGCGA AAGATTAGAAATCTTTTGGGCTTTGCCCGC GCAGGTTCGA chrXVI:435638-436181 + 65 1.44e-12 TAAGGACCAA CAGATTTGCAATCTGCTGCGCTACCACTGC GCCATA chrII:642838-643250 + 44 1.44e-12 TAAGGACCAA CAGATTTGCAATCTGCTGCGCTACCACTGC GCCATACGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAYTTRARATCTGTTGGRCKKTKSYCSS MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:689395-689857 2.5e-17 15_[+3]_55 chrV:288134-288772 2.5e-17 64_[-3]_6 chrIV:519652-519969 2.3e-15 10_[+3]_60 chrXII:962811-963276 2.3e-15 4_[-3]_66 chrXIV:725740-726582 2.3e-15 48_[-3]_22 chrII:9450-9869 2.3e-15 1_[+3]_69 chrII:347400-347944 2.3e-15 8_[+3]_62 chrXII:167749-168227 6.5e-14 30_[-3]_40 chrXIII:258973-259441 6.5e-14 25_[-3]_45 chrIV:437543-438104 6.5e-14 25_[+3]_45 chrXVI:435638-436181 1.4e-12 64_[+3]_6 chrII:642838-643250 1.4e-12 43_[+3]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAYTTRARATCTGTTGGRCKKTKSYCSS MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGAYTTRARATCTGTTGGRCKKTKSYCSS width=30 seqs=12 chrXVI:689395-689857 ( 16) CAGACTTGAAATCTGTTGGGCTCTGCCCGC 1 chrV:288134-288772 ( 65) CAGACTTGAAATCTGTTGGGCTCTGCCCGC 1 chrIV:519652-519969 ( 11) CAGACTTAAGATCTGTTGGACGGTTGTCCG 1 chrXII:962811-963276 ( 5) CAGACTTAAGATCTGTTGGACGGTTGTCCG 1 chrXIV:725740-726582 ( 49) CAGACTTAAGATCTGTTGGACGGTTGTCCG 1 chrII:9450-9869 ( 2) CAGACTTAAGATCTGTTGGACGGTTGTCCG 1 chrII:347400-347944 ( 9) CAGACTTAAGATCTGTTGGACGGTTGTCCG 1 chrXII:167749-168227 ( 31) AAGATTAGAAATCTTTTGGGCTTTGCCCGC 1 chrXIII:258973-259441 ( 26) AAGATTAGAAATCTTTTGGGCTTTGCCCGC 1 chrIV:437543-438104 ( 26) AAGATTAGAAATCTTTTGGGCTTTGCCCGC 1 chrXVI:435638-436181 ( 65) CAGATTTGCAATCTGCTGCGCTACCACTGC 1 chrII:642838-643250 ( 44) CAGATTTGCAATCTGCTGCGCTACCACTGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAYTTRARATCTGTTGGRCKKTKSYCSS MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 11.4521 E= 1.6e-048 -30 196 -1023 -1023 170 -1023 -1023 -1023 -1023 -1023 238 -1023 170 -1023 -1023 -1023 -1023 160 -1023 44 -1023 -1023 -1023 170 -30 -1023 -1023 129 44 -1023 160 -1023 144 -21 -1023 -1023 92 -1023 111 -1023 170 -1023 -1023 -1023 -1023 -1023 -1023 170 -1023 238 -1023 -1023 -1023 -1023 -1023 170 -1023 -1023 196 -30 -1023 -21 -1023 144 -1023 -1023 -1023 170 -1023 -1023 238 -1023 -1023 -21 211 -1023 44 -1023 160 -1023 -1023 238 -1023 -1023 -1023 -1023 111 92 -88 -21 111 -30 -1023 -21 -1023 144 -1023 -21 111 44 -88 111 111 -1023 -1023 160 -1023 44 -1023 211 -1023 -88 -1023 111 160 -1023 -1023 160 111 -1023 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAYTTRARATCTGTTGGRCKKTKSYCSS MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 12 E= 1.6e-048 0.250000 0.750000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.583333 0.000000 0.416667 0.000000 0.000000 0.000000 1.000000 0.250000 0.000000 0.000000 0.750000 0.416667 0.000000 0.583333 0.000000 0.833333 0.166667 0.000000 0.000000 0.583333 0.000000 0.416667 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.750000 0.250000 0.000000 0.166667 0.000000 0.833333 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.166667 0.833333 0.000000 0.416667 0.000000 0.583333 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.416667 0.583333 0.166667 0.166667 0.416667 0.250000 0.000000 0.166667 0.000000 0.833333 0.000000 0.166667 0.416667 0.416667 0.166667 0.416667 0.416667 0.000000 0.000000 0.583333 0.000000 0.416667 0.000000 0.833333 0.000000 0.166667 0.000000 0.416667 0.583333 0.000000 0.000000 0.583333 0.416667 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAYTTRARATCTGTTGGRCKKTKSYCSS MEME-3 regular expression -------------------------------------------------------------------------------- [CA]AGA[CT]T[TA][GA]A[AG]ATCT[GT]TTGG[GA]C[TG][GT]T[GT][CG][CT]C[GC][CG] -------------------------------------------------------------------------------- Time 985.71 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:350615-351061 2.00e-06 43_[-2(4.52e-05)]_15_[-1(1.27e-08)] chrVIII:451228-453073 4.52e-01 100 chrXV:109527-110673 7.37e-01 100 chrVII:319244-320456 4.05e-03 21_[-1(1.26e-06)]_58 chrXI:307950-308472 5.80e-05 30_[+2(6.83e-08)]_49 chrI:166170-166615 4.94e-01 100 chrIX:25939-27004 2.22e-03 49_[+2(5.57e-07)]_30 chrXVI:819311-820045 6.20e-01 100 chrXIII:747645-748153 7.58e-06 52_[+1(2.07e-09)]_27 chrVII:609304-611484 7.96e-01 100 chrVII:515927-517529 6.62e-01 100 chrXI:430620-432350 7.06e-01 100 chrIV:835737-837970 2.15e-02 100 chrIII:142041-142951 8.79e-01 100 chrXVI:377949-378455 9.88e-01 100 chrIV:1236537-1238504 9.66e-01 100 chrXI:666013-666182 4.14e-01 100 chrV:51800-53313 9.94e-01 100 chrXIV:602056-602580 1.72e-06 48_[-2(1.59e-10)]_31 chrIV:1095134-1095668 1.87e-06 28_[+1(1.13e-08)]_51 chrXII:605135-605604 7.57e-01 100 chrII:164522-165882 6.15e-01 100 chrII:326401-327150 6.70e-06 76_[+1(3.05e-09)]_3 chrXI:518754-521219 2.77e-01 100 chrXVI:134482-135835 4.34e-01 100 chrVII:533640-535197 9.99e-01 100 chrXV:710118-710576 9.99e-01 100 chrXII:234565-234905 8.89e-01 100 chrVII:1004027-1004461 1.44e-04 62_[-1(1.76e-07)]_17 chrXV:832233-832851 9.85e-01 100 chrXIII:225279-226679 3.12e-01 100 chrV:241966-242582 4.05e-01 100 chrXVI:572176-572804 9.57e-02 100 chrII:642838-643250 1.18e-13 43_[+3(1.44e-12)]_27 chrIV:975729-977234 4.00e-01 100 chrXV:638971-639473 5.74e-01 100 chrIV:1079100-1081301 5.29e-01 100 chrXIII:837752-838374 8.28e-01 100 chrVII:291729-291943 1.56e-01 100 chrXII:875848-876152 4.19e-02 62_[-3(6.22e-05)]_8 chrVIII:475412-475911 2.31e-01 100 chrX:662588-662688 4.54e-01 100 chrVII:422877-423536 5.63e-03 18_[-1(1.07e-05)]_61 chrX:58993-59093 4.82e-07 12_[+2(5.04e-10)]_67 chrXII:975763-976197 3.10e-04 62_[+1(5.41e-08)]_17 chrXIII:309673-309945 2.35e-01 100 chrXIV:330785-332525 1.33e-01 100 chrXV:24382-24813 2.72e-01 100 chrVII:543911-544927 4.33e-01 100 chrXVI:768876-769484 1.08e-01 100 chrXIII:168209-169374 4.83e-04 58_[-2(1.27e-07)]_21 chrIX:254061-254585 2.43e-01 100 chrXV:571659-572154 9.32e-01 100 chrXIII:305940-307236 5.87e-01 100 chrVIII:50127-50864 2.77e-02 57_[+2(2.19e-05)]_22 chrXII:49428-49579 6.53e-01 100 chrX:538031-538131 7.03e-01 100 chrVII:255185-255660 8.07e-02 100 chrXVI:296994-297268 7.90e-01 100 chrVII:115331-115730 3.92e-12 12_[-2(2.49e-10)]_39_[-1(3.05e-09)]_\ 7 chrXI:381756-382484 9.84e-01 100 chrXII:949027-953716 6.22e-02 100 chrXII:214720-215071 1.66e-06 47_[+1(1.02e-10)]_32 chrXI:158203-159637 7.18e-01 100 chrV:362169-363268 2.02e-01 100 chrIV:1239376-1240352 9.73e-01 100 chrVII:370857-371723 2.13e-01 100 chrXIII:420237-420874 8.07e-01 100 chrXIV:104586-105313 6.57e-01 100 chrXIII:195931-196307 2.90e-07 8_[+1(3.24e-10)]_71 chrXII:710483-710893 7.63e-01 100 chrVIII:134081-134766 3.61e-01 100 chrXI:258049-259976 6.48e-01 100 chrIII:127502-127911 3.80e-05 64_[-2(2.94e-09)]_15 chrXIII:91157-92097 6.85e-02 100 chrIII:149738-150226 7.55e-04 28_[-1(1.74e-06)]_51 chrV:434380-435224 4.41e-01 100 chrXII:636699-639958 7.17e-02 100 chrIV:1359207-1361268 8.18e-01 100 chrXII:366034-366564 5.71e-02 100 chrVII:401298-401620 1.21e-01 100 chrXVI:435638-436181 1.18e-13 64_[+3(1.44e-12)]_6 chrVII:269-1298 6.67e-01 100 chrXIV:783716-784322 2.00e-01 100 chrII:347400-347944 3.95e-15 8_[+3(2.33e-15)]_2_[+1(4.28e-07)]_\ 39 chrXII:628158-628883 5.90e-01 100 chrII:59516-61299 4.18e-01 100 chrXII:1029121-1030276 8.56e-01 100 chrXV:925189-925422 4.88e-02 100 chrVIII:358263-358784 2.54e-11 14_[+1(1.13e-08)]_35_[+2(1.71e-09)]_\ 9 chrVII:316264-317492 2.84e-01 100 chrXI:162062-162745 7.70e-01 100 chrXV:1025750-1026044 1.05e-01 100 chrIV:409971-410822 3.05e-13 37_[-2(1.59e-10)]_16_[-1(5.11e-10)]_\ 5 chrXV:232008-232376 1.48e-01 100 chrVII:919769-920223 8.40e-01 100 chrXVI:280565-283254 4.29e-01 100 chrXII:731316-732402 2.71e-01 100 chrXVI:810577-811428 2.96e-02 100 chrX:115757-115857 5.85e-01 100 chrVI:180564-181257 7.43e-01 100 chrII:332271-334235 7.43e-01 100 chrXVI:581850-582376 1.78e-13 3_[-2(4.40e-10)]_16_[-1(3.24e-10)]_\ 39 chrIII:78362-78919 9.80e-01 100 chrXII:592333-592822 6.16e-09 1_[+1(1.74e-06)]_44_[+2(8.52e-09)]_\ 13 chrIII:58644-59071 1.56e-01 100 chrIV:488387-489193 2.81e-05 66_[+1(3.05e-09)]_13 chrXVI:927686-928132 3.69e-02 55_[-2(3.92e-05)]_24 chrIV:45194-46173 1.42e-01 100 chrXV:168081-168363 8.34e-01 100 chrXIII:279676-280315 4.40e-01 100 chrIX:335965-336621 5.13e-01 100 chrVI:191081-191776 6.21e-01 100 chrII:592270-593498 4.83e-01 100 chrV:176880-177457 5.80e-06 21_[-1(2.75e-10)]_58 chrIV:946147-946633 3.47e-05 29_[-1(1.61e-07)]_50 chrXV:505713-506755 3.11e-01 100 chrXIII:19016-20577 4.33e-01 100 chrIX:325737-326147 6.74e-01 100 chrXV:438452-438995 9.15e-07 34_[-1(3.05e-09)]_45 chrVII:959845-961642 4.51e-01 100 chrXIII:753017-756046 3.84e-01 100 chrVIII:505784-506240 8.83e-01 100 chrXVI:879444-880584 7.48e-01 100 chrV:486907-487613 5.68e-01 100 chrVII:736172-736790 8.59e-01 100 chrXV:1003918-1004947 3.74e-01 100 chrXIII:872701-873062 2.02e-01 100 chrXV:866514-868135 9.87e-01 100 chrX:745037-745137 4.21e-01 100 chrVII:845344-846044 7.25e-09 9_[-2(4.15e-05)]_14_[-1(6.85e-10)]_\ 35 chrX:607885-607985 5.07e-01 100 chrXII:796339-797868 7.60e-01 100 chrXII:449402-450320 8.51e-02 100 chrIV:884250-886025 7.81e-01 100 chrXIII:760455-763172 1.90e-01 100 chrXIV:575171-576174 8.11e-01 100 chrIX:69149-69583 5.38e-01 100 chrVII:765934-766831 3.72e-01 100 chrII:88955-90207 2.02e-01 100 chrXI:457984-458998 5.51e-01 100 chrV:423046-425360 6.86e-01 100 chrXII:92340-92881 1.99e-06 59_[-1(3.24e-10)]_20 chrXV:671004-671733 2.21e-01 100 chrIV:1401205-1403484 7.31e-01 100 chrXIII:756379-756784 6.69e-01 100 chrVII:726354-728686 4.57e-01 100 chrXI:7780-8223 5.13e-01 100 chrXI:230084-231707 9.36e-01 100 chrVIII:237748-238121 5.57e-06 29_[+2(1.71e-09)]_50 chrXIV:96006-96464 3.96e-06 65_[+1(3.77e-10)]_14 chrIV:117145-117927 5.97e-02 100 chrXIII:572614-573191 2.08e-09 40_[+1(4.03e-08)]_16_[+2(3.69e-07)]_\ 2 chrII:415525-416074 9.65e-01 100 chrVIII:562337-562591 1.45e-01 100 chrV:431025-431917 9.51e-01 100 chrVII:806169-808230 6.53e-01 100 chrX:355186-355286 2.53e-05 41_[-2(7.41e-05)]_15_[-1(1.48e-07)]_\ 2 chrXVI:378655-379229 8.94e-01 100 chrXII:704285-704628 6.69e-01 100 chrVIII:382692-383505 8.37e-01 100 chrXIII:372174-372662 2.87e-01 100 chrIII:151121-151525 1.78e-13 20_[+1(3.24e-10)]_16_[+2(4.40e-10)]_\ 22 chrII:9450-9869 3.95e-15 1_[+3(2.33e-15)]_2_[+1(4.28e-07)]_\ 46 chrXIII:222264-223802 3.04e-01 100 chrXII:645849-646288 4.48e-01 100 chrXIII:159278-160192 9.48e-01 100 chrVIII:455065-456459 4.43e-02 42_[-3(4.91e-05)]_28 chrIV:321627-321959 8.16e-01 100 chrXV:216278-216721 5.49e-01 100 chrX:415662-415762 3.39e-04 48_[+1(1.36e-07)]_31 chrIV:538842-539517 8.61e-01 100 chrII:254842-255740 3.64e-01 100 chrIII:13979-15293 4.41e-01 100 chrI:68337-68559 8.66e-01 100 chrXIV:725740-726582 3.95e-15 25_[-1(4.28e-07)]_2_[-3(2.33e-15)]_\ 22 chrX:617701-617801 6.16e-09 3_[-2(8.52e-09)]_44_[-1(1.74e-06)]_\ 11 chrXIV:576718-577586 1.00e+00 100 chrX:542774-542874 6.53e-04 49_[+2(1.27e-07)]_30 chrIX:394348-395307 3.40e-01 100 chrXIII:5446-5661 2.77e-01 100 chrXVI:821608-822290 9.69e-01 100 chrVI:137178-137700 8.26e-01 100 chrII:624594-625397 6.81e-01 100 chrIV:599219-600383 3.54e-01 100 chrIX:141645-142471 4.38e-01 100 chrIX:231288-231656 8.91e-01 100 chrV:66711-69516 5.84e-01 100 chrV:152113-153682 9.03e-01 100 chrIV:1449713-1450469 9.83e-01 100 chrXII:713140-713618 6.02e-01 100 chrVIII:119664-121696 8.39e-02 100 chrXII:962811-963276 6.09e-16 4_[-3(2.33e-15)]_2_[+2(3.66e-08)]_\ 43 chrXII:231847-234240 3.55e-01 100 chrII:256289-257969 4.40e-01 100 chrVIII:386192-386504 8.96e-01 100 chrXV:113581-113924 4.66e-01 100 chrXI:773-1085 9.50e-01 100 chrVIII:554194-554741 7.89e-01 100 chrV:266186-268250 6.53e-01 100 chrXV:160326-160714 1.30e-01 100 chrXIV:7301-7470 8.58e-01 100 chrXIII:287483-289970 2.13e-01 100 chrXIV:632416-632911 1.15e-04 28_[-1(5.41e-08)]_51 chrVII:774106-774683 3.93e-13 9_[-2(1.59e-10)]_16_[-1(5.11e-10)]_\ 33 chrIII:177063-178789 7.84e-01 100 chrVI:222658-224167 3.17e-01 100 chrX:517643-517743 2.31e-04 5_[+1(1.74e-06)]_74 chrVII:706664-707187 7.18e-01 100 chrXIV:739303-739746 6.60e-01 100 chrXVI:502394-503277 9.94e-01 100 chrXII:1051911-1052225 4.44e-07 62_[+1(1.44e-10)]_17 chrXVI:404505-407858 9.18e-01 100 chrIV:411123-411668 4.12e-01 100 chrXV:340122-340632 3.66e-05 18_[+2(3.16e-08)]_61 chrIV:1161532-1161962 3.61e-01 100 chrVI:82007-84551 1.31e-01 100 chrXVI:339911-340995 5.66e-02 100 chrV:469248-469802 8.13e-05 24_[-1(1.42e-08)]_55 chrXV:300905-301828 9.07e-01 100 chrIV:1488712-1490753 1.35e-01 100 chrXI:202336-203293 4.49e-01 100 chrXVI:585780-587718 9.67e-01 100 chrXV:1027762-1029303 7.60e-01 100 chrV:490880-492573 3.60e-01 100 chrXIII:914880-915592 6.50e-01 100 chrVII:276997-278736 1.41e-01 100 chrXII:903848-904426 2.10e-01 100 chrVII:436657-443190 1.67e-01 100 chrIV:802568-803005 2.26e-06 4_[+1(1.27e-08)]_15_[+2(4.52e-05)]_\ 39 chrIX:197360-197743 8.27e-01 100 chrXV:911898-912655 1.05e-01 100 chrVII:779392-779932 8.63e-08 8_[-2(4.15e-05)]_15_[-1(3.77e-10)]_\ 35 chrXV:796978-797460 5.78e-01 100 chrIV:1450727-1451542 9.84e-01 100 chrII:45609-46812 4.99e-01 100 chrXIII:362932-363376 2.97e-03 [-1(1.26e-06)]_79 chrI:190048-191067 4.74e-01 100 chrXIII:556952-558194 8.74e-02 100 chrXIV:301020-303849 1.00e+00 100 chrXI:617687-618417 9.35e-01 100 chrXII:166694-167397 9.05e-01 100 chrX:651212-651312 8.27e-01 100 chrVII:397948-398320 3.40e-01 100 chrXV:439150-439501 8.90e-01 100 chrVII:479173-482985 9.47e-01 100 chrXVI:744068-744576 1.44e-04 52_[-1(1.76e-07)]_27 chrV:225516-225676 7.84e-01 100 chrXV:520599-520930 8.57e-01 100 chrXI:46584-46996 6.40e-07 4_[+1(7.92e-10)]_75 chrXI:364456-365260 2.92e-01 100 chrIX:138124-139165 1.76e-01 100 chrV:288134-288772 2.56e-14 64_[-3(2.54e-17)]_6 chrVII:147994-149545 6.02e-01 100 chrIV:437543-438104 1.14e-17 3_[-2(3.32e-10)]_1_[+3(6.49e-14)]_\ 45 chrX:139098-139198 7.32e-01 100 chrXVI:701851-702345 9.10e-01 100 chrXVI:338742-339333 9.33e-01 100 chrXI:517785-518269 7.97e-13 15_[-2(1.59e-10)]_16_[-1(5.11e-10)]_\ 27 chrXIII:253305-253590 8.15e-02 100 chrXV:487437-487761 9.40e-01 100 chrV:235111-237210 6.06e-01 100 chrIV:1300308-1301347 2.42e-01 100 chrXVI:55835-56427 6.80e-01 100 chrXIII:258973-259441 1.14e-17 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chrXIV:716805-717558 2.34e-01 100 chrVI:210326-210923 3.47e-05 54_[+1(1.61e-07)]_25 chrVI:162033-162805 2.86e-01 100 chrVIII:211637-212333 6.03e-01 100 chrIV:216528-218091 1.54e-01 100 chrV:174417-175077 1.28e-01 100 chrXV:678588-679173 4.12e-01 100 chrXV:504911-505511 5.72e-01 100 chrIV:980719-981162 4.26e-01 100 chrIV:519652-519969 3.95e-15 10_[+3(2.33e-15)]_2_[+1(4.28e-07)]_\ 37 chrXI:381220-381446 9.35e-01 100 chrXIII:224095-224693 3.92e-01 100 chrX:378225-378325 1.59e-09 9_[-2(6.83e-08)]_17_[-1(1.42e-08)]_\ 32 chrXII:875034-875682 7.04e-07 72_[-2(2.49e-10)]_7 chrXI:282776-284879 4.86e-02 100 chrXII:673497-675150 9.28e-01 100 chrIV:491449-492713 2.04e-01 100 chrIX:257372-258148 7.56e-01 100 chrIX:210658-210948 7.00e-01 100 chrXIII:379047-379608 3.42e-04 35_[+1(1.36e-07)]_44 chrVIII:175012-175420 3.58e-01 100 chrXVI:188210-188934 5.85e-01 100 chrXIII:320962-321327 5.98e-06 62_[+1(5.11e-10)]_17 chrXIV:771671-772437 6.93e-01 100 chrXIV:61938-64613 9.89e-01 100 chrXII:198345-199769 4.70e-01 100 chrXI:74414-74880 1.11e-09 31_[-2(2.94e-09)]_17_[-1(5.41e-08)]_\ 10 chrI:141374-143701 8.09e-01 100 chrXIV:568053-568793 8.95e-01 100 chrVII:287143-287793 4.71e-01 100 chrVII:930841-931613 7.86e-01 100 chrXII:261550-265231 4.93e-01 100 chrVII:227234-228362 3.84e-01 100 chrIV:221176-222351 4.98e-01 100 chrIX:332664-333261 5.00e-01 100 chrVII:411949-412573 6.83e-01 100 chrXV:978726-979568 1.67e-01 100 chrXV:274469-275025 2.03e-02 45_[-1(1.76e-05)]_34 chrVII:968815-969387 9.84e-01 100 chrXV:92719-94801 5.28e-01 100 chrIV:1175744-1176641 5.75e-01 100 chrV:550885-551578 5.28e-01 100 chrV:61054-62157 5.26e-01 100 chrXV:619203-619482 1.64e-01 100 chrXI:67710-69026 2.89e-01 100 chrIV:1352110-1353065 6.98e-01 100 chrXV:903596-905697 8.19e-02 100 chrVI:101016-102326 7.44e-01 100 chrXV:27894-28165 8.91e-01 100 chrII:87950-88595 5.42e-01 100 chrVIII:62530-63069 2.65e-04 46_[-1(1.26e-06)]_33 chrXIII:861172-861437 3.13e-01 100 chrXIII:463290-463895 2.38e-05 16_[-2(7.41e-05)]_15_[-1(1.48e-07)]_\ 27 chrXII:734599-735028 3.24e-08 43_[-2(1.59e-10)]_36 chrIV:1201133-1201283 7.40e-01 100 chrXVI:678556-679425 3.62e-01 100 chrIII:227733-229172 3.76e-01 100 chrIV:306646-310183 5.25e-01 100 chrXIV:585477-586632 8.40e-01 100 chrXV:907893-909135 5.84e-01 100 chrX:391785-391885 1.47e-01 100 chrIV:579029-580709 5.61e-01 100 chrIV:1201512-1202406 3.64e-01 100 chrII:236536-237445 6.39e-01 100 chrIX:300012-300485 1.78e-13 39_[+1(3.24e-10)]_16_[+2(4.40e-10)]_\ 3 chrXV:384688-385095 1.75e-01 100 chrXI:163272-164536 6.27e-01 100 chrXVI:731644-732443 8.95e-01 100 chrXV:252823-255028 6.70e-01 100 chrVI:157847-158202 8.78e-06 7_[+2(1.71e-09)]_72 chrX:354017-354117 9.63e-04 38_[-2(1.27e-07)]_41 chrXV:382675-382825 9.84e-02 100 chrIII:314928-316049 9.01e-01 100 chrV:269186-271057 8.81e-01 100 chrIV:992721-993210 8.41e-01 100 chrXVI:794476-796162 8.05e-01 100 chrXVI:209616-210486 8.20e-01 100 chrIX:316052-318277 9.94e-01 100 chrXVI:66983-67479 1.28e-01 100 chrVIII:16556-18505 5.38e-01 100 chrVIII:115120-116389 9.63e-01 100 chrI:138954-139356 8.47e-02 100 chrVIII:122142-122583 4.22e-01 100 chrII:373015-375789 6.67e-01 100 chrXV:159206-160138 7.17e-03 100 chrII:36244-36607 6.03e-06 27_[-2(1.71e-09)]_52 chrVIII:34369-36271 7.44e-01 100 chrIX:99617-100023 8.94e-01 100 chrXII:201610-202700 4.11e-01 100 chrV:441795-442714 5.89e-01 100 chrXI:618728-619328 2.08e-01 100 chrII:408238-409218 6.71e-02 100 chrVII:541710-542162 7.55e-07 4_[-1(2.75e-10)]_75 chrXV:979727-981306 7.83e-01 100 chrXIII:407894-408935 4.14e-01 100 chrXV:1091135-1091290 5.76e-01 100 chrXII:783899-784517 5.40e-01 100 chrIII:30546-31181 9.18e-01 100 chrX:233730-233830 1.36e-09 35_[-2(3.16e-08)]_16_[-1(7.90e-08)]_\ 7 chrIV:322169-323613 6.43e-01 100 chrXIII:540291-541071 7.75e-01 100 chrIII:123349-123818 5.96e-09 53_[+1(1.72e-12)]_26 chrXVI:770567-771093 7.09e-01 100 chrXII:367942-371423 9.06e-01 100 chrVII:828450-828983 2.30e-05 66_[+1(2.07e-09)]_13 chrX:414787-414887 1.78e-13 [-2(4.40e-10)]_16_[-1(3.24e-10)]_42 chrIV:229168-230793 2.93e-01 100 chrX:531489-531589 7.25e-09 2_[-2(4.15e-05)]_14_[-1(6.85e-10)]_\ 42 chrIII:831-1063 2.87e-01 100 chrX:18830-18930 7.14e-01 100 chrVII:648768-649374 2.99e-01 100 chrVIII:74840-76499 5.01e-02 70_[-1(5.02e-05)]_9 chrXV:464271-464867 5.09e-07 1_[-1(3.24e-10)]_78 chrXIV:415143-416241 5.61e-01 100 chrV:85088-86958 3.41e-01 100 chrX:545415-545515 5.21e-01 100 chrVII:364900-366721 7.42e-01 100 chrIV:1305406-1305860 2.49e-07 51_[-2(3.32e-10)]_28 chrIV:1013402-1013985 8.77e-02 100 chrXI:490735-491355 1.41e-03 14_[-1(2.67e-07)]_65 chrXV:383017-384039 1.67e-01 100 chrXI:99701-100129 2.27e-01 100 chrVII:794186-794567 6.43e-01 100 chrIV:667758-668248 4.31e-07 63_[+1(1.44e-10)]_16 chrXIV:351259-353113 8.40e-01 100 chrX:293247-293347 3.83e-01 100 chrXIV:715735-716654 9.07e-01 100 chrIX:370215-370642 1.90e-06 79_[-1(2.75e-10)] chrX:348814-348914 8.26e-01 100 chrVII:254097-254723 2.55e-01 100 chrIII:137781-138992 4.41e-02 5_[+2(6.65e-05)]_74 chrVIII:125880-127516 1.52e-02 36_[-3(3.60e-05)]_34 chrXV:281951-282878 6.63e-01 100 chrXI:219694-220114 1.19e-06 45_[-2(1.59e-10)]_34 chrXIV:6618-6988 2.29e-01 100 chrXI:141657-143017 2.29e-01 100 chrXIII:873733-873996 4.33e-01 100 chrXII:793781-796057 8.28e-01 100 chrXIII:352062-352843 5.26e-01 100 chrX:360285-360385 2.72e-04 12_[+2(2.48e-07)]_67 chrIII:82142-82675 2.64e-01 100 chrXVI:213042-216427 2.81e-01 100 chrXVI:302642-304423 8.81e-02 100 chrIV:1361891-1362621 5.95e-03 77_[-2(1.24e-05)]_2 chrV:220895-222207 2.73e-01 100 chrIX:128815-130176 8.48e-02 100 chrXIV:525068-525281 3.48e-01 100 chrXI:261086-262117 9.76e-01 100 chrXVI:860128-860680 7.25e-09 29_[-2(4.15e-05)]_14_[-1(6.85e-10)]_\ 15 chrIX:248583-249401 6.16e-01 100 chrXI:313197-314022 3.51e-01 100 chrIV:644821-645377 7.36e-01 100 chrV:138456-142416 5.12e-01 100 chrV:438481-438966 3.06e-09 31_[-2(6.83e-08)]_17_[-1(1.42e-08)]_\ 10 chrXII:373932-374683 5.39e-01 100 chrXV:87393-88553 6.07e-01 100 chrX:157409-157509 3.20e-01 100 chrXV:901430-901675 2.50e-02 44_[-3(5.38e-05)]_26 chrXIV:499175-500852 2.34e-01 100 chrV:435610-436013 1.78e-13 [+1(3.24e-10)]_16_[+2(4.40e-10)]_42 chrX:702383-702483 5.60e-02 100 chrXIII:162960-164343 9.66e-01 100 chrIV:520738-521166 3.64e-02 74_[-2(4.52e-05)]_5 chrVII:122074-122766 7.98e-01 100 chrX:223722-223822 6.10e-01 100 chrI:28299-29110 9.27e-01 100 chrXIV:569633-570086 1.65e-06 67_[+1(1.44e-10)]_12 chrIV:385685-387552 9.41e-01 100 chrIX:174870-175364 7.73e-05 5_[-1(1.01e-08)]_74 chrXV:988376-989544 6.65e-01 100 chrXV:28342-29104 2.12e-01 100 chrII:603996-607555 2.65e-01 100 chrXII:498267-500172 6.54e-01 100 chrIV:465185-465743 7.05e-01 100 chrXIV:560262-560993 8.56e-01 100 chrXII:1017659-1019450 6.62e-01 100 chrXII:855514-857618 5.01e-01 100 chrIX:255038-257081 7.30e-01 100 chrIII:15489-15683 7.04e-01 100 chrIV:433728-434948 3.73e-06 22_[+2(5.04e-10)]_57 chrIV:118426-118866 8.35e-01 100 chrXIII:300924-302495 9.64e-01 100 chrV:321982-323532 5.75e-01 100 chrX:90030-90130 3.91e-01 100 chrXII:611584-612054 5.91e-01 100 chrV:117220-118297 2.84e-01 100 chrX:422717-422817 1.14e-05 15_[-1(4.03e-08)]_64 chrVI:226379-226998 6.62e-08 59_[+1(3.24e-10)]_20 chrIV:913961-914847 9.23e-02 100 chrXVI:689395-689857 2.56e-14 15_[+3(2.54e-17)]_55 chrXV:424095-424702 9.63e-02 100 chrXIV:173813-174679 1.24e-02 100 chrXIII:290522-291877 3.12e-01 100 chrXI:38714-39271 7.38e-01 100 chrI:181126-181571 8.32e-01 100 chrV:305770-307447 1.43e-01 100 chrXI:3-184 3.83e-01 100 chrIV:541181-542044 7.40e-01 100 chrXVI:560019-560488 4.87e-11 4_[+1(1.13e-08)]_35_[+2(1.71e-09)]_\ 19 chrII:476533-477744 5.50e-01 100 chrVII:986653-987793 9.10e-01 100 chrXIV:88933-89759 9.99e-01 100 chrXVI:519615-520652 4.33e-01 100 chrXVI:172336-172637 7.35e-01 100 chrVII:555123-557504 3.41e-01 100 chrVII:730965-731430 3.10e-04 32_[-1(5.41e-08)]_47 chrIV:1150714-1151195 7.28e-05 11_[+2(6.47e-09)]_68 chrXI:140758-141501 7.72e-01 100 chrII:478970-479414 9.24e-01 100 chrXVI:653865-655056 2.97e-01 100 chrXI:302707-303232 2.57e-04 73_[-1(1.36e-07)]_6 chrXII:919436-923252 5.32e-02 100 chrXV:594303-594699 9.36e-01 100 chrXII:656829-657220 6.65e-07 6_[+2(1.59e-10)]_73 chrX:204549-204649 7.91e-04 22_[-1(1.48e-07)]_57 chrVIII:145724-146473 9.95e-01 100 chrV:130820-131401 3.05e-06 31_[+1(1.76e-08)]_15_[+2(4.52e-05)]_\ 12 chrVIII:147572-149550 8.36e-01 100 chrXVI:39629-40601 2.17e-01 100 chrXII:426904-427438 3.18e-06 15_[-2(7.41e-05)]_15_[-1(1.48e-07)]_\ 28 chrVII:882431-883991 1.54e-01 100 chrXIV:758971-759997 7.34e-02 100 chrX:26190-26290 5.73e-01 100 chrXII:241607-243526 8.34e-01 100 chrXV:226417-226889 7.25e-09 17_[+1(6.85e-10)]_14_[+2(4.15e-05)]_\ 27 chrXII:808966-815642 7.63e-01 100 chrVII:405463-405859 9.43e-01 100 chrXVI:75324-76792 9.61e-01 100 chrVII:738891-739605 4.79e-01 100 chrV:143427-144125 1.19e-01 100 chrVII:328385-329175 9.93e-01 100 chrVII:661490-661945 9.03e-01 100 chrXIII:302747-303369 1.90e-02 18_[+2(6.30e-05)]_61 chrXV:287173-288482 9.70e-02 100 chrVIII:48194-48972 9.52e-01 100 chrXII:447796-448961 9.81e-01 100 chrXI:322446-323000 2.13e-01 100 chrVII:561257-561724 8.70e-01 100 chrXIII:768164-768445 9.22e-01 100 chrXV:353889-354325 9.72e-06 30_[+2(5.04e-10)]_49 chrX:540895-540995 8.74e-01 100 chrXIII:797635-798244 7.22e-01 100 chrX:181615-181715 3.54e-01 100 chrXI:558365-559461 5.26e-01 100 chrXV:234272-235044 3.36e-01 100 chrXV:228114-228586 1.11e-09 35_[-2(2.94e-09)]_17_[-1(5.41e-08)]_\ 6 chrXII:167749-168227 1.14e-17 30_[-3(6.49e-14)]_1_[+2(3.32e-10)]_\ 18 chrXI:354727-357003 9.99e-01 100 chrVII:310287-312347 9.93e-01 100 chrIX:68249-68985 7.07e-01 100 chrVI:131328-131591 6.77e-01 100 chrX:651889-651989 4.82e-01 100 chrXI:513038-513600 1.00e-04 72_[+1(1.48e-07)]_7 chrII:226968-227358 1.05e-01 100 chrVI:30233-32343 2.74e-01 100 chrXIII:650748-653015 3.58e-01 100 chrX:606195-606295 9.87e-01 100 chrVII:599384-601061 3.40e-01 100 chrVII:989203-990725 6.97e-01 100 chrIII:316209-316591 4.17e-02 100 chrVIII:555760-556618 9.56e-01 100 chrXI:107459-110475 8.88e-01 100 chrII:644934-645444 2.04e-06 68_[-1(2.75e-10)]_11 chrXV:348838-349341 9.90e-01 100 chrXII:932060-932543 9.75e-01 100 chrX:172728-172828 3.54e-01 100 chrIV:619685-620190 1.28e-01 100 chrIX:385699-387085 3.04e-01 100 chrXII:837677-839418 8.67e-01 100 chrIV:1256792-1257275 2.02e-07 34_[+1(6.85e-10)]_24_[+2(7.41e-05)] chrXV:29254-30885 7.12e-01 100 chrVIII:132797-133102 9.15e-01 100 chrXII:930688-931874 8.96e-01 100 chrIV:568697-569325 2.12e-05 7_[-2(7.41e-05)]_15_[-1(1.48e-07)]_\ 36 chrXII:728297-728791 3.56e-02 100 chrXII:897342-899955 9.47e-01 100 chrV:207351-208376 3.00e-01 100 chrIX:388139-389111 4.03e-01 100 chrXV:232554-232808 2.91e-01 100 chrXIV:413539-414988 2.27e-02 12_[-1(2.08e-05)]_67 chrXV:725113-725752 9.71e-01 100 chrXIV:241378-241785 4.95e-02 100 chrIII:107144-107825 9.28e-01 100 chrI:182159-183142 9.94e-01 100 chrX:120274-120374 2.27e-01 100 chrV:42139-42472 9.41e-01 100 chrIII:162108-164289 9.84e-01 100 chrII:555733-558467 3.53e-01 100 chrV:460534-462194 2.27e-01 100 chrXIII:586365-587162 6.78e-01 100 chrVIII:488387-488782 4.69e-01 100 chrX:454250-454350 3.79e-01 100 chrXIII:131578-132100 6.39e-07 45_[+1(2.07e-09)]_[+3(7.66e-05)]_4 chrXI:146945-147431 5.46e-01 100 chrXIII:549875-553258 3.05e-01 100 chrV:23528-24016 3.81e-01 100 chrIX:323605-324389 3.23e-01 100 chrXVI:431826-434122 1.56e-01 100 chrXIV:374672-375129 2.58e-11 23_[-2(7.41e-10)]_34_[-1(1.13e-08)]_\ 1 chrXV:968060-968892 8.40e-01 100 chrXV:853659-854831 2.52e-14 1_[+1(1.02e-10)]_16_[+2(2.68e-11)]_\ 41 chrVII:702810-704164 5.12e-01 100 chrVII:110353-110786 8.91e-01 100 chrIII:80-606 1.25e-01 15_[+2(7.22e-05)]_64 chrXV:841451-842936 8.20e-01 100 chrX:396557-396657 7.25e-09 32_[+1(6.85e-10)]_14_[+2(4.15e-05)]_\ 12 chrXIII:625869-627195 1.46e-01 100 chrX:122166-122266 6.33e-02 100 chrXIV:442733-444822 6.76e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************