******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MOT3/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:326464-327100 1.0000 100 chrVIII:381389-383460 1.0000 100 chrXV:28413-30887 1.0000 100 chrVII:197927-199735 1.0000 100 chrXI:333952-335011 1.0000 100 chrI:166173-166619 1.0000 100 chrIV:1401108-1403440 1.0000 100 chrXVI:821590-822352 1.0000 100 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chrVII:544411-546046 1.0000 100 chrXIII:372208-372658 1.0000 100 chrVII:828414-828981 1.0000 100 chrXV:912003-912617 1.0000 100 chrXIII:650824-652993 1.0000 100 chrVIII:379639-379861 1.0000 100 chrXII:1012159-1012616 1.0000 100 chrIV:769491-770121 1.0000 100 chrVIII:410993-411760 1.0000 100 chrVIII:296725-297192 1.0000 100 chrXII:793779-797611 1.0000 100 chrIII:149721-150196 1.0000 100 chrIII:315609-316043 1.0000 100 chrIX:299963-300468 1.0000 100 chrVII:856553-857670 1.0000 100 chrIII:142020-142966 1.0000 100 chrXI:98808-100095 1.0000 100 chrVI:136980-137698 1.0000 100 chrII:59526-61224 1.0000 100 chrVII:846935-848335 1.0000 100 chrXIV:302554-303799 1.0000 100 chrXII:897438-899782 1.0000 100 chrIX:370227-370741 1.0000 100 chrII:530950-532264 1.0000 100 chrXII:826929-827854 1.0000 100 chrVII:610391-611499 1.0000 100 chrXVI:435667-436199 1.0000 100 chrXV:977181-978354 1.0000 100 chrXI:163265-164498 1.0000 100 chrX:523462-523562 1.0000 100 chrII:405701-406256 1.0000 100 chrV:85093-86961 1.0000 100 chrVII:599334-601276 1.0000 100 chrXV:1053892-1054330 1.0000 100 chrX:120257-120357 1.0000 100 chrXIII:586401-586904 1.0000 100 chrIX:174485-175588 1.0000 100 chrX:172695-172795 1.0000 100 chrV:117335-118327 1.0000 100 chrXII:783910-784588 1.0000 100 chrVII:736176-736618 1.0000 100 chrXV:968090-968477 1.0000 100 chrIV:1080510-1081019 1.0000 100 chrXII:47492-49578 1.0000 100 chrIV:884251-886612 1.0000 100 chrVII:185348-185924 1.0000 100 chrXV:300898-301727 1.0000 100 chrXVI:692822-695059 1.0000 100 chrIV:330984-332985 1.0000 100 chrII:301078-301693 1.0000 100 chrXII:932103-932530 1.0000 100 chrVI:219952-222258 1.0000 100 chrII:266194-266673 1.0000 100 chrXIV:186991-187593 1.0000 100 chrXI:162073-162790 1.0000 100 chrVIII:475433-475911 1.0000 100 chrXII:731369-732330 1.0000 100 chrX:90627-90727 1.0000 100 chrXI:578697-579378 1.0000 100 chrVIII:451187-453157 1.0000 100 chrXII:447875-449066 1.0000 100 chrVII:422885-423516 1.0000 100 chrXIV:282052-283435 1.0000 100 chrXIII:168232-169047 1.0000 100 chrXIV:632418-632895 1.0000 100 chrXIII:507166-509338 1.0000 100 chrXIV:330788-332645 1.0000 100 chrXII:459601-460744 1.0000 100 chrIV:1162506-1164670 1.0000 100 chrI:28586-28888 1.0000 100 chrIV:427212-428725 1.0000 100 chrXIV:88907-89909 1.0000 100 chrXVI:100768-101355 1.0000 100 chrV:431014-432017 1.0000 100 chrXV:408903-409978 1.0000 100 chrV:241998-242513 1.0000 100 chrXVI:432501-434364 1.0000 100 chrV:492211-492572 1.0000 100 chrVIII:385128-386935 1.0000 100 chrXII:440426-441613 1.0000 100 chrIX:183278-183708 1.0000 100 chrII:197260-197858 1.0000 100 chrIII:57396-60954 1.0000 100 chrV:422853-425458 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MOT3/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MOT3/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MOT3/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.297 C 0.203 G 0.203 T 0.297 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MOT3/background): A 0.306 C 0.194 G 0.194 T 0.306 ******************************************************************************** ******************************************************************************** MOTIF GRTCCBSGGTTCGAWYCCSSG MEME-1 width = 21 sites = 86 llr = 1353 E-value = 5.0e-233 ******************************************************************************** -------------------------------------------------------------------------------- Motif GRTCCBSGGTTCGAWYCCSSG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 242:2:22:1::3a31:::2: pos.-specific C 2::7543::::a::2598541 probability G 561:2457a:::7:2:::446 matrix T 1:6212:::9a:::45121:3 bits 2.4 * * 2.1 * * 1.9 * * * 1.7 * ** * * Relative 1.4 ****** * Entropy 1.2 * ******* ** (22.7 bits) 0.9 * * ******* *** 0.7 * * ********* ****** 0.5 ** *********** ****** 0.2 ************** ****** 0.0 --------------------- Multilevel GGTCCGGGGTTCGATTCCCGG consensus AAATACCA A AC GCT sequence C T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCCBSGGTTCGAWYCCSSG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIV:631523-632129 - 78 1.29e-12 GA GGTCCCGGGTTCGAGTCCCGG CTCGCCCCCA chrIV:1256812-1257285 - 18 7.59e-12 CCCAAGCATG GGGCCCGGGTTCGATTCCCGG CTTCCGCATT chrIX:370227-370741 + 26 8.86e-11 TTCACCGTGG AGACCGGGGTTCGACTCCCCG TATCGGAGTA chrII:644978-645423 + 60 8.86e-11 TTCACCGTGG AGACCGGGGTTCGACTCCCCG TATCGGAGTT chrV:176876-177451 + 29 8.86e-11 TTCACCGTGG AGACCGGGGTTCGACTCCCCG TATCGGAGTA chrIII:82368-82653 - 10 8.86e-11 TTCACCGTGG AGACCGGGGTTCGACTCCCCG TATCGGAGT chrXVI:860150-860703 + 45 8.86e-11 GCCATCGTTG GGCCCCCGGTTCGATTCCGGG CTTGCGCAGA chrV:354675-355338 + 21 8.86e-11 TTCACCGTGG AGACCGGGGTTCGACTCCCCG TATCGGAGTA chrVI:180690-181265 - 55 8.86e-11 GCCATCGTTG GGCCCCCGGTTCGATTCCGGG CTTGCGCAGT chrV:487084-487598 - 48 8.86e-11 TTCACCGTGG AGACCGGGGTTCGACTCCCCG TATCGGAGTA chrVII:541718-542149 + 10 8.86e-11 TCACCGTGG AGACCGGGGTTCGACTCCCCG TATCGGAGTG chrIV:1075266-1075753 - 21 2.15e-10 ACACGGCAAA GGTCCCGAGTTCGATCCTCGG TTGGAACATT chrII:197260-197858 + 30 4.70e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAGACCATT chrIX:183278-183708 - 5 4.70e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAG chrII:350624-351057 + 80 4.70e-10 TTGATCCGGA CAACCCCGGTTCGAATCCGGG chrXIV:569655-570090 - 53 4.70e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAGACCATT chrIII:168125-168539 - 27 4.70e-10 TTGATCCGGA CAACCCCGGTTCGAATCCGGG TAGGACCTTT chrV:130804-131384 - 46 4.70e-10 TTGATCCGAA CAACCCCGGTTCGAATCCGGG TAAGACCTAT chrIV:802537-803006 - 18 4.70e-10 TTGATCCGGA CAACCCCGGTTCGAATCCGGG TAGGACCTCT chrV:443031-443358 - 66 4.70e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAGACCATA chrIV:667762-668251 - 59 4.70e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGCT AGAGACCATT chrV:311698-312314 - 75 1.01e-09 GAAGA GGTCATCGGTTCGATTCCGGT TGCGTCCAAT chrIX:299963-300468 - 71 1.35e-09 TAATCATAA GGTTAGGGGTTCGAGCCCCCT ACAGGGCTAT chrV:435596-435995 - 15 1.35e-09 TTAATCATAA GGTTAGGGGTTCGAGCCCCCT ACAGGGCTTT chrX:414773-414873 + 56 1.35e-09 TTAATCATAA GGTTAGGGGTTCGAGCCCCCT ACAGGGCTAA chrVI:226326-227086 - 40 1.35e-09 TTAATCATAA GGTTAGGGGTTCGAGCCCCCT ACAGGGCTTA chrXIII:586401-586904 - 42 1.54e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCATT chrXIII:372208-372658 - 70 1.54e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCATT chrIV:488438-489147 - 63 1.54e-09 ACACGGCGAA GATCCCGAGTTCGAACCTCGG TTGGATCAGA chrXI:307897-308449 - 29 1.54e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCAAT chrV:438528-439000 + 31 1.54e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCAAT chrXV:663579-664097 - 32 1.54e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCATT chrVII:412058-412581 - 33 1.54e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCAAG chrVII:823344-823725 + 43 1.54e-09 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CGAAATCATT chrII:326464-327100 - 68 1.54e-09 ACACGGCGAA GATCCCGAGTTCGAACCTCGG TTGGATCAAA chrXI:578697-579378 + 45 3.40e-09 GATACCGAAA TGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrVII:115328-115750 + 66 3.40e-09 GATACCGAAA TGTCAGGGGTTCGAGCCCCCT ATGAGGAGTT chrII:405701-406256 + 75 4.40e-09 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCG chrXIII:463330-463894 + 35 4.40e-09 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXI:513108-513609 - 32 4.40e-09 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXIV:96026-96461 - 56 4.40e-09 TCCAAGGTGG GGACACGGGTTCGATTCTCGT ACCGCTCAAA chrIV:568700-569351 + 32 4.40e-09 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCGGAGAA chrXII:426924-427478 + 24 4.40e-09 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCGGAGAA chrX:355184-355284 + 75 4.40e-09 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCG chrX:204539-204639 + 20 4.40e-09 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXIII:808017-808542 - 25 4.40e-09 CTGATCCGAA CAACCCCAGTTCGAATCCGGG TGGGACCTTC chrIX:336053-336627 - 67 4.40e-09 GTCGCGTGCC AGATCGGGGTTCAATTCCCCG TCGCGGAGAT chrXIII:195927-196307 - 9 8.12e-09 GCATGCGAGA GGCCCTGGGTTCAATTCCCAG CTCGCCCC chrXIII:320961-321324 - 63 1.60e-08 GCATGGGAGA GGTCTCCGGTTCGATTCCGGA CTCGTCCATT chrXI:219721-220131 + 63 1.60e-08 GCATGGGAGA GGTCTCCGGTTCGATTCCGGA CTCGTCCAAT chrVII:700259-701255 + 21 2.00e-08 ATCTCTTCGG AGGCGCGGGTTCAAACCCCGC GGGTATCAAT chrVII:736176-736618 + 36 3.74e-08 CTAATCAGAA GATTATGGGTTCGACCCCCAT CGTGAGTGTT chrX:374172-374272 - 55 3.74e-08 CTAATCAGAA GATTATGGGTTCGACCCCCAT CGTGAGTGCT chrXIII:131645-132097 - 12 3.74e-08 CTAATCAGAA GATTATGGGTTCGACCCCCAT CGTGAGTGCT chrV:492211-492572 - 19 6.74e-08 CGAACCAGAA GATTCCAGGTTCAAGTCCTGG CGGGGAAGGA chrXII:374184-374686 + 14 6.74e-08 CGAACCAGAA GATTCCAGGTTCAAGTCCTGG CGGGGAAGAT chrII:266194-266673 + 39 8.15e-08 GTAATGTGGA GATCATCGGTTCAAATCCGAT TGGAAGCATT chrXIV:104591-105148 + 30 8.15e-08 GTAATGTGGA GATCATCGGTTCAAATCCGAT TGGAAGCATA chrXIV:725920-726396 + 31 8.94e-08 AATACTGAAG GATGCGAGGTTCGAACTCGCG CGGACAACCG chrIV:519656-519952 - 47 8.94e-08 GTTATTGAAG GATGCGAGGTTCGAACTCGCG CGGACAACCG chrII:347399-347936 - 44 8.94e-08 ATTACTGAAG GATGCGAGGTTCGAACTCGCG CGGACAACCG chrXVI:435667-436199 - 18 1.07e-07 CAAATCTGTT GGTCCTTAGTTCGATCCTGAG TGCGAGCTTT chrII:642838-643252 - 20 1.07e-07 CAAATCTGTT GGTCCTTAGTTCGATCCTGAG TGCGAGCTTC chrX:415739-415839 - 5 1.40e-07 GCAATCGAAG GGTTGCAGGTTCAATTCCTGT CCGT chrIV:1175748-1176095 + 2 3.81e-07 A GGTCGAGAGTTCGAACCTCCC CTGGAGCATT chrIII:149721-150196 + 55 4.45e-07 ATAACCCTGA TGTCCTCGGATCGAAACCGAG CGGCGCTATT chrXIII:837741-838232 + 52 4.45e-07 GAAATCTTGA GATCGGGCGTTCGACTCGCCC CCGGGAGATA chrX:517631-517731 - 1 4.45e-07 ATAACCCTGA TGTCCTCGGATCGAAACCGAG chrIV:946129-946618 + 49 4.45e-07 GAAATCTTGA GATCGGGCGTTCGACTCGCCC CCGGGAGATT chrXVI:338520-339283 - 5 4.45e-07 ATAACCCTGA TGTCCTCGGATCGAAACCGAG CGGC chrIV:1095130-1095639 - 44 4.45e-07 GATATCTGGA GGTCCTGTGTTCGATCCACAG AGTTCGCATT chrXIV:632418-632895 + 38 5.59e-07 TTAATCGCAA GATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrXII:975777-976184 - 61 5.59e-07 TTAATCGCAA GATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrVII:730960-731408 + 48 5.59e-07 TTAATCGCAA GATCGTGAGTTCAACCCTCAC TGGGGTCGTT chrVII:483310-483743 + 10 6.98e-07 TTATCGCCG GATCTCCGCTTCGAGACCGGG TTTGTTTTCA chrIV:437555-438060 + 68 9.98e-07 TGGGCTTTGC CCGCGCAGGTTCGAGTCCTGC AGTTGTCGTC chrII:226976-227363 + 9 9.98e-07 GGCTTTGC CCGCGCAGGTTCGAGTCCTGC AGTTGTCGTT chrXV:274448-275012 + 65 1.40e-06 TGGGTTTTAC CTGCGCAGGTTCGAATCCTGT CTGTGACGCA chrVI:191302-191771 - 35 1.40e-06 TGGGTTTTAC CTGCGCAGGTTCGAATCCTGT CTGTGACGCA chrXV:722864-724837 - 50 2.21e-06 CAATATGTCT AATTTGAGGTTCGAAACCCAT ATCCAACATT chrVIII:379639-379861 - 29 2.50e-06 CCATTTGAGG GATCTGAAGATCAAGTCCGCC TTAAGGGTGC chrXI:517392-518204 - 80 2.65e-06 . TGTTGGCTGTTCAATCTCCGG AATTTGTGCA chrXII:366026-366936 - 33 3.00e-06 CCGATAGCAA AGGCTTAGGTTCGAACGCGAG ACAATTTTCT chrX:422725-422825 - 1 3.18e-06 AAATGTGCTC CAGGGGAGGTTCGAACTCTCG chrV:288150-288721 - 66 5.61e-06 TGGGCTCTGC CCGCGCTGGTTCAAATCCTGC TGGTGTCGTT chrXI:230960-231578 - 10 1.60e-05 CTTATGTATT TGCCGTGCGATCAACCTCCGG GGCCCGGGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCCBSGGTTCGAWYCCSSG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:631523-632129 1.3e-12 77_[-1]_2 chrIV:1256812-1257285 7.6e-12 17_[-1]_62 chrIX:370227-370741 8.9e-11 25_[+1]_54 chrII:644978-645423 8.9e-11 59_[+1]_20 chrV:176876-177451 8.9e-11 28_[+1]_51 chrIII:82368-82653 8.9e-11 9_[-1]_70 chrXVI:860150-860703 8.9e-11 44_[+1]_35 chrV:354675-355338 8.9e-11 20_[+1]_59 chrVI:180690-181265 8.9e-11 54_[-1]_25 chrV:487084-487598 8.9e-11 47_[-1]_32 chrVII:541718-542149 8.9e-11 9_[+1]_70 chrIV:1075266-1075753 2.1e-10 20_[-1]_59 chrII:197260-197858 4.7e-10 29_[+1]_50 chrIX:183278-183708 4.7e-10 4_[-1]_75 chrII:350624-351057 4.7e-10 79_[+1] chrXIV:569655-570090 4.7e-10 52_[-1]_27 chrIII:168125-168539 4.7e-10 26_[-1]_53 chrV:130804-131384 4.7e-10 45_[-1]_34 chrIV:802537-803006 4.7e-10 17_[-1]_62 chrV:443031-443358 4.7e-10 65_[-1]_14 chrIV:667762-668251 4.7e-10 58_[-1]_21 chrV:311698-312314 1e-09 74_[-1]_5 chrIX:299963-300468 1.3e-09 70_[-1]_9 chrV:435596-435995 1.3e-09 14_[-1]_65 chrX:414773-414873 1.3e-09 55_[+1]_24 chrVI:226326-227086 1.3e-09 39_[-1]_40 chrXIII:586401-586904 1.5e-09 41_[-1]_38 chrXIII:372208-372658 1.5e-09 69_[-1]_10 chrIV:488438-489147 1.5e-09 62_[-1]_17 chrXI:307897-308449 1.5e-09 28_[-1]_51 chrV:438528-439000 1.5e-09 30_[+1]_49 chrXV:663579-664097 1.5e-09 31_[-1]_48 chrVII:412058-412581 1.5e-09 32_[-1]_47 chrVII:823344-823725 1.5e-09 42_[+1]_37 chrII:326464-327100 1.5e-09 67_[-1]_12 chrXI:578697-579378 3.4e-09 44_[+1]_35 chrVII:115328-115750 3.4e-09 65_[+1]_14 chrII:405701-406256 4.4e-09 74_[+1]_5 chrXIII:463330-463894 4.4e-09 34_[+1]_45 chrXI:513108-513609 4.4e-09 31_[-1]_48 chrXIV:96026-96461 4.4e-09 55_[-1]_24 chrIV:568700-569351 4.4e-09 31_[+1]_48 chrXII:426924-427478 4.4e-09 23_[+1]_56 chrX:355184-355284 4.4e-09 74_[+1]_5 chrX:204539-204639 4.4e-09 19_[+1]_60 chrXIII:808017-808542 4.4e-09 24_[-1]_55 chrIX:336053-336627 4.4e-09 66_[-1]_13 chrXIII:195927-196307 8.1e-09 8_[-1]_71 chrXIII:320961-321324 1.6e-08 62_[-1]_17 chrXI:219721-220131 1.6e-08 62_[+1]_17 chrVII:700259-701255 2e-08 20_[+1]_59 chrVII:736176-736618 3.7e-08 35_[+1]_44 chrX:374172-374272 3.7e-08 54_[-1]_25 chrXIII:131645-132097 3.7e-08 11_[-1]_68 chrV:492211-492572 6.7e-08 18_[-1]_61 chrXII:374184-374686 6.7e-08 13_[+1]_66 chrII:266194-266673 8.1e-08 38_[+1]_41 chrXIV:104591-105148 8.1e-08 29_[+1]_50 chrXIV:725920-726396 8.9e-08 30_[+1]_49 chrIV:519656-519952 8.9e-08 46_[-1]_33 chrII:347399-347936 8.9e-08 43_[-1]_36 chrXVI:435667-436199 1.1e-07 17_[-1]_62 chrII:642838-643252 1.1e-07 19_[-1]_60 chrX:415739-415839 1.4e-07 4_[-1]_75 chrIV:1175748-1176095 3.8e-07 1_[+1]_78 chrIII:149721-150196 4.5e-07 54_[+1]_25 chrXIII:837741-838232 4.5e-07 51_[+1]_28 chrX:517631-517731 4.5e-07 [-1]_79 chrIV:946129-946618 4.5e-07 48_[+1]_31 chrXVI:338520-339283 4.5e-07 4_[-1]_75 chrIV:1095130-1095639 4.5e-07 43_[-1]_36 chrXIV:632418-632895 5.6e-07 37_[+1]_42 chrXII:975777-976184 5.6e-07 60_[-1]_19 chrVII:730960-731408 5.6e-07 47_[+1]_32 chrVII:483310-483743 7e-07 9_[+1]_70 chrIV:437555-438060 1e-06 67_[+1]_12 chrII:226976-227363 1e-06 8_[+1]_71 chrXV:274448-275012 1.4e-06 64_[+1]_15 chrVI:191302-191771 1.4e-06 34_[-1]_45 chrXV:722864-724837 2.2e-06 49_[-1]_30 chrVIII:379639-379861 2.5e-06 28_[-1]_51 chrXI:517392-518204 2.7e-06 79_[-1] chrXII:366026-366936 3e-06 32_[-1]_47 chrX:422725-422825 3.2e-06 [-1]_79 chrV:288150-288721 5.6e-06 65_[-1]_14 chrXI:230960-231578 1.6e-05 9_[-1]_70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCCBSGGTTCGAWYCCSSG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GRTCCBSGGTTCGAWYCCSSG width=21 seqs=86 chrXIV:631523-632129 ( 78) GGTCCCGGGTTCGAGTCCCGG 1 chrIV:1256812-1257285 ( 18) GGGCCCGGGTTCGATTCCCGG 1 chrIX:370227-370741 ( 26) AGACCGGGGTTCGACTCCCCG 1 chrII:644978-645423 ( 60) AGACCGGGGTTCGACTCCCCG 1 chrV:176876-177451 ( 29) AGACCGGGGTTCGACTCCCCG 1 chrIII:82368-82653 ( 10) AGACCGGGGTTCGACTCCCCG 1 chrXVI:860150-860703 ( 45) GGCCCCCGGTTCGATTCCGGG 1 chrV:354675-355338 ( 21) AGACCGGGGTTCGACTCCCCG 1 chrVI:180690-181265 ( 55) GGCCCCCGGTTCGATTCCGGG 1 chrV:487084-487598 ( 48) AGACCGGGGTTCGACTCCCCG 1 chrVII:541718-542149 ( 10) AGACCGGGGTTCGACTCCCCG 1 chrIV:1075266-1075753 ( 21) GGTCCCGAGTTCGATCCTCGG 1 chrII:197260-197858 ( 30) GATCAGCGGTTCGATCCCGCT 1 chrIX:183278-183708 ( 5) GATCAGCGGTTCGATCCCGCT 1 chrII:350624-351057 ( 80) CAACCCCGGTTCGAATCCGGG 1 chrXIV:569655-570090 ( 53) GATCAGCGGTTCGATCCCGCT 1 chrIII:168125-168539 ( 27) CAACCCCGGTTCGAATCCGGG 1 chrV:130804-131384 ( 46) CAACCCCGGTTCGAATCCGGG 1 chrIV:802537-803006 ( 18) CAACCCCGGTTCGAATCCGGG 1 chrV:443031-443358 ( 66) GATCAGCGGTTCGATCCCGCT 1 chrIV:667762-668251 ( 59) GATCAGCGGTTCGATCCCGCT 1 chrV:311698-312314 ( 75) GGTCATCGGTTCGATTCCGGT 1 chrIX:299963-300468 ( 71) GGTTAGGGGTTCGAGCCCCCT 1 chrV:435596-435995 ( 15) GGTTAGGGGTTCGAGCCCCCT 1 chrX:414773-414873 ( 56) GGTTAGGGGTTCGAGCCCCCT 1 chrVI:226326-227086 ( 40) GGTTAGGGGTTCGAGCCCCCT 1 chrXIII:586401-586904 ( 42) CGTCCCCAGTTCGATCCTGGG 1 chrXIII:372208-372658 ( 70) CGTCCCCAGTTCGATCCTGGG 1 chrIV:488438-489147 ( 63) GATCCCGAGTTCGAACCTCGG 1 chrXI:307897-308449 ( 29) CGTCCCCAGTTCGATCCTGGG 1 chrV:438528-439000 ( 31) CGTCCCCAGTTCGATCCTGGG 1 chrXV:663579-664097 ( 32) CGTCCCCAGTTCGATCCTGGG 1 chrVII:412058-412581 ( 33) CGTCCCCAGTTCGATCCTGGG 1 chrVII:823344-823725 ( 43) CGTCCCCAGTTCGATCCTGGG 1 chrII:326464-327100 ( 68) GATCCCGAGTTCGAACCTCGG 1 chrXI:578697-579378 ( 45) TGTCAGGGGTTCGAGCCCCCT 1 chrVII:115328-115750 ( 66) TGTCAGGGGTTCGAGCCCCCT 1 chrII:405701-406256 ( 75) AGATCGGGGTTCAATTCCCCG 1 chrXIII:463330-463894 ( 35) AGATCGGGGTTCAATTCCCCG 1 chrXI:513108-513609 ( 32) AGATCGGGGTTCAATTCCCCG 1 chrXIV:96026-96461 ( 56) GGACACGGGTTCGATTCTCGT 1 chrIV:568700-569351 ( 32) AGATCGGGGTTCAATTCCCCG 1 chrXII:426924-427478 ( 24) AGATCGGGGTTCAATTCCCCG 1 chrX:355184-355284 ( 75) AGATCGGGGTTCAATTCCCCG 1 chrX:204539-204639 ( 20) AGATCGGGGTTCAATTCCCCG 1 chrXIII:808017-808542 ( 25) CAACCCCAGTTCGAATCCGGG 1 chrIX:336053-336627 ( 67) AGATCGGGGTTCAATTCCCCG 1 chrXIII:195927-196307 ( 9) GGCCCTGGGTTCAATTCCCAG 1 chrXIII:320961-321324 ( 63) GGTCTCCGGTTCGATTCCGGA 1 chrXI:219721-220131 ( 63) GGTCTCCGGTTCGATTCCGGA 1 chrVII:700259-701255 ( 21) AGGCGCGGGTTCAAACCCCGC 1 chrVII:736176-736618 ( 36) GATTATGGGTTCGACCCCCAT 1 chrX:374172-374272 ( 55) GATTATGGGTTCGACCCCCAT 1 chrXIII:131645-132097 ( 12) GATTATGGGTTCGACCCCCAT 1 chrV:492211-492572 ( 19) GATTCCAGGTTCAAGTCCTGG 1 chrXII:374184-374686 ( 14) GATTCCAGGTTCAAGTCCTGG 1 chrII:266194-266673 ( 39) GATCATCGGTTCAAATCCGAT 1 chrXIV:104591-105148 ( 30) GATCATCGGTTCAAATCCGAT 1 chrXIV:725920-726396 ( 31) GATGCGAGGTTCGAACTCGCG 1 chrIV:519656-519952 ( 47) GATGCGAGGTTCGAACTCGCG 1 chrII:347399-347936 ( 44) GATGCGAGGTTCGAACTCGCG 1 chrXVI:435667-436199 ( 18) GGTCCTTAGTTCGATCCTGAG 1 chrII:642838-643252 ( 20) GGTCCTTAGTTCGATCCTGAG 1 chrX:415739-415839 ( 5) GGTTGCAGGTTCAATTCCTGT 1 chrIV:1175748-1176095 ( 2) GGTCGAGAGTTCGAACCTCCC 1 chrIII:149721-150196 ( 55) TGTCCTCGGATCGAAACCGAG 1 chrXIII:837741-838232 ( 52) GATCGGGCGTTCGACTCGCCC 1 chrX:517631-517731 ( 1) TGTCCTCGGATCGAAACCGAG 1 chrIV:946129-946618 ( 49) GATCGGGCGTTCGACTCGCCC 1 chrXVI:338520-339283 ( 5) TGTCCTCGGATCGAAACCGAG 1 chrIV:1095130-1095639 ( 44) GGTCCTGTGTTCGATCCACAG 1 chrXIV:632418-632895 ( 38) GATCGTGAGTTCAACCCTCAC 1 chrXII:975777-976184 ( 61) GATCGTGAGTTCAACCCTCAC 1 chrVII:730960-731408 ( 48) GATCGTGAGTTCAACCCTCAC 1 chrVII:483310-483743 ( 10) GATCTCCGCTTCGAGACCGGG 1 chrIV:437555-438060 ( 68) CCGCGCAGGTTCGAGTCCTGC 1 chrII:226976-227363 ( 9) CCGCGCAGGTTCGAGTCCTGC 1 chrXV:274448-275012 ( 65) CTGCGCAGGTTCGAATCCTGT 1 chrVI:191302-191771 ( 35) CTGCGCAGGTTCGAATCCTGT 1 chrXV:722864-724837 ( 50) AATTTGAGGTTCGAAACCCAT 1 chrVIII:379639-379861 ( 29) GATCTGAAGATCAAGTCCGCC 1 chrXI:517392-518204 ( 80) TGTTGGCTGTTCAATCTCCGG 1 chrXII:366026-366936 ( 33) AGGCTTAGGTTCGAACGCGAG 1 chrX:422725-422825 ( 1) CAGGGGAGGTTCGAACTCTCG 1 chrV:288150-288721 ( 66) CCGCGCTGGTTCAAATCCTGC 1 chrXI:230960-231578 ( 10) TGCCGTGCGATCAACCTCCGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCCBSGGTTCGAWYCCSSG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 10.1299 E= 5.0e-233 -55 11 136 -191 24 -248 158 -371 -32 -206 -89 98 -1307 189 -206 -39 -55 146 -6 -213 -471 94 107 -55 -91 80 126 -313 -55 -248 192 -371 -1307 -406 235 -1307 -239 -1307 -1307 162 -1307 -1307 -1307 171 -1307 236 -1307 -1307 -26 -1307 194 -1307 171 -1307 -1307 -1307 -19 -6 -36 37 -239 122 -1307 68 -1307 224 -406 -213 -471 198 -306 -63 -1307 133 107 -155 -63 103 107 -1307 -371 -60 161 -26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCCBSGGTTCGAWYCCSSG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 86 E= 5.0e-233 0.209302 0.209302 0.500000 0.081395 0.360465 0.034884 0.581395 0.023256 0.244186 0.046512 0.104651 0.604651 0.000000 0.720930 0.046512 0.232558 0.209302 0.534884 0.186047 0.069767 0.011628 0.372093 0.406977 0.209302 0.162791 0.337209 0.465116 0.034884 0.209302 0.034884 0.732558 0.023256 0.000000 0.011628 0.988372 0.000000 0.058140 0.000000 0.000000 0.941860 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.255814 0.000000 0.744186 0.000000 1.000000 0.000000 0.000000 0.000000 0.267442 0.186047 0.151163 0.395349 0.058140 0.453488 0.000000 0.488372 0.000000 0.918605 0.011628 0.069767 0.011628 0.767442 0.023256 0.197674 0.000000 0.488372 0.406977 0.104651 0.197674 0.395349 0.406977 0.000000 0.023256 0.127907 0.593023 0.255814 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCCBSGGTTCGAWYCCSSG MEME-1 regular expression -------------------------------------------------------------------------------- [GAC][GA][TA][CT][CA][GCT][GC][GA]GTTC[GA]A[TA][TC]CC[CG][GC][GT] -------------------------------------------------------------------------------- Time 355.71 secs. ******************************************************************************** ******************************************************************************** MOTIF GSCSRRWKGGKTARGGCGYMWGAYTRHWAA MEME-2 width = 30 sites = 39 llr = 722 E-value = 3.8e-099 ******************************************************************************** -------------------------------------------------------------------------------- Motif GSCSRRWKGGKTARGGCGYMWGAYTRHWAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::12444::::1a5:::3144:6::44397 pos.-specific C 137522:11:11:13:a:351127:222:1 probability G 75224424684::37a:721282::3211: matrix T 21:1:1552268:1::::4131:3a134:2 bits 2.4 ** 2.1 ** 1.9 ** 1.7 * ** * * Relative 1.4 * * **** * * Entropy 1.2 * * * * **** * ** * (26.7 bits) 0.9 *** ** ** **** * ** * 0.7 *** ***** **** **** ** 0.5 *** * ****** **** * **** ** 0.2 ******************** ***** ** 0.0 ------------------------------ Multilevel GGCCAATTGGTTAAGGCGTCAGACTAATAA consensus C GGGAGTTG GC ACAT GT GTA sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSRRWKGGKTARGGCGYMWGAYTRHWAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrIV:1305421-1305840 + 58 9.88e-12 AAGGCAACTT GGCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrIV:437555-438060 + 23 9.88e-12 AAGGCAACTT GGCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrXII:167762-168257 - 29 9.88e-12 ATGGCAACTT GGCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrXIV:632418-632895 + 2 1.15e-11 G GCCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrVII:730960-731408 + 12 1.15e-11 AGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrIII:127515-127919 + 58 1.15e-11 TGACTCCATG GCCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrII:266194-266673 + 3 1.34e-11 AT GGCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrIX:174485-175588 + 53 1.34e-11 GAGCTTCTAT GGCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrV:435596-435995 - 42 6.40e-11 GAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrX:414773-414873 + 20 6.40e-11 TAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrIV:1201501-1202017 + 49 6.40e-11 TAGCCTTGTT GGCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrVI:226326-227086 - 67 6.40e-11 TGTT GGCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrV:492211-492572 - 46 7.31e-11 TATTCCTCGT GGCCCAATGGTCACGGCGTCTGGCTACGAA CCAGAAGATT chrXV:340143-340589 - 18 7.31e-11 TGTTCCTCGT GGCCCAATGGTCACGGCGTCTGGCTACGAA CCAGAAGATT chrXI:490752-491209 + 46 7.31e-11 TGTTCCTCGT GGCCCAATGGTCACGGCGTCTGGCTACGAA CCAGAAGATT chrIX:183278-183708 - 32 9.49e-11 TGGTCTCTTG GCCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrXIV:602077-602560 + 53 9.49e-11 TGGTCTCTTG GCCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrXIV:725920-726396 - 71 7.92e-10 . GCCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrXII:962826-963289 - 10 7.92e-10 CGGAGGGTTG GCCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGA chrX:424273-424373 - 33 7.92e-10 TGGAGGGTTG GCCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrX:617703-617803 + 46 2.42e-09 TGGGAGTTTG GCCGAGTGGTTTAAGGCGTCAGATTTAGGT GGATTTAACC chrXV:274448-275012 + 1 3.53e-09 . GGCCGAGTGGTTAAGGCGATGCCCTGCTAT TTCCTCAGAA chrXVI:435667-436199 - 45 4.64e-09 AAAGCTCGTA TGGCGCAGTGGTAGCGCAGCAGATTGCAAA TCTGTTGGTC chrXVI:775624-776045 - 16 4.64e-09 AAAGCTCGTA TGGCGCAGTGGTAGCGCAGCAGATTGCAAA TCTGTTGGTC chrII:642838-643252 - 47 4.64e-09 AAAGCTCGTA TGGCGCAGTGGTAGCGCAGCAGATTGCAAA TCTGTTGGTC chrIII:149721-150196 + 19 1.09e-08 TTGAGCGCCG TGGCGCAGTGGAAGCGCGCAGGGCTCATAA CCCTGATGTC chrX:517631-517731 - 28 1.09e-08 TTAAGCGCCG TGGCGCAGTGGAAGCGCGCAGGGCTCATAA CCCTGATGTC chrXVI:338520-339283 - 32 1.09e-08 AGCAGCGCCG TGGCGCAGTGGAAGCGCGCAGGGCTCATAA CCCTGATGTC chrXIII:586401-586904 - 69 1.62e-08 TG GTCTAGTCGGTTATGGCATCTGCTTAACAC GCAGAACGTC chrXI:307897-308449 - 56 1.62e-08 TGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACAC GCAGAACGTC chrXV:663579-664097 - 59 1.62e-08 TGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACAC GCAGAACGTC chrVII:412058-412581 - 60 1.62e-08 TGGTTTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACAC GCAGAACGTC chrVII:823344-823725 + 7 1.62e-08 TTCGTG GTCTAGTCGGTTATGGCATCTGCTTAACAC GCAGAACGTC chrXIII:837741-838232 + 2 1.89e-08 G CCAAGTTGGTTTAAGGCGCAAGACTGTAAT TTACCACTAC chrX:354010-354110 + 64 1.89e-08 CTCTCGGTAG CCAAGTTGGTTTAAGGCGCAAGACTGTAAT TTACCAC chrVI:210460-210899 - 39 1.89e-08 CTCTCGGTAG CCAAGTTGGTTTAAGGCGCAAGACTGTAAT TTACCACTAC chrVI:167212-167684 + 49 1.89e-08 CTCTCGGTAG CCAAGTTGGTTTAAGGCGCAAGACTGTAAT TTACCACTAC chrXIII:131645-132097 - 39 4.77e-08 TTAGCTCGCG TGGCGTAATGGCAACGCGTCTGACTTCTAA TCAGAAGATT chrXI:219721-220131 + 27 4.36e-07 TAGGGCGTGT GGCGTAGTCGGTAGCGCGCTCCCTTAGCAT GGGAGAGGTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSRRWKGGKTARGGCGYMWGAYTRHWAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIV:1305421-1305840 9.9e-12 57_[+2]_13 chrIV:437555-438060 9.9e-12 22_[+2]_48 chrXII:167762-168257 9.9e-12 28_[-2]_42 chrXIV:632418-632895 1.2e-11 1_[+2]_69 chrVII:730960-731408 1.2e-11 11_[+2]_59 chrIII:127515-127919 1.2e-11 57_[+2]_13 chrII:266194-266673 1.3e-11 2_[+2]_68 chrIX:174485-175588 1.3e-11 52_[+2]_18 chrV:435596-435995 6.4e-11 41_[-2]_29 chrX:414773-414873 6.4e-11 19_[+2]_51 chrIV:1201501-1202017 6.4e-11 48_[+2]_22 chrVI:226326-227086 6.4e-11 66_[-2]_4 chrV:492211-492572 7.3e-11 45_[-2]_25 chrXV:340143-340589 7.3e-11 17_[-2]_53 chrXI:490752-491209 7.3e-11 45_[+2]_25 chrIX:183278-183708 9.5e-11 31_[-2]_39 chrXIV:602077-602560 9.5e-11 52_[+2]_18 chrXIV:725920-726396 7.9e-10 70_[-2] chrXII:962826-963289 7.9e-10 9_[-2]_61 chrX:424273-424373 7.9e-10 32_[-2]_38 chrX:617703-617803 2.4e-09 45_[+2]_25 chrXV:274448-275012 3.5e-09 [+2]_70 chrXVI:435667-436199 4.6e-09 44_[-2]_26 chrXVI:775624-776045 4.6e-09 15_[-2]_55 chrII:642838-643252 4.6e-09 46_[-2]_24 chrIII:149721-150196 1.1e-08 18_[+2]_52 chrX:517631-517731 1.1e-08 27_[-2]_43 chrXVI:338520-339283 1.1e-08 31_[-2]_39 chrXIII:586401-586904 1.6e-08 68_[-2]_2 chrXI:307897-308449 1.6e-08 55_[-2]_15 chrXV:663579-664097 1.6e-08 58_[-2]_12 chrVII:412058-412581 1.6e-08 59_[-2]_11 chrVII:823344-823725 1.6e-08 6_[+2]_64 chrXIII:837741-838232 1.9e-08 1_[+2]_69 chrX:354010-354110 1.9e-08 63_[+2]_7 chrVI:210460-210899 1.9e-08 38_[-2]_32 chrVI:167212-167684 1.9e-08 48_[+2]_22 chrXIII:131645-132097 4.8e-08 38_[-2]_32 chrXI:219721-220131 4.4e-07 26_[+2]_44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSRRWKGGKTARGGCGYMWGAYTRHWAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GSCSRRWKGGKTARGGCGYMWGAYTRHWAA width=30 seqs=39 chrIV:1305421-1305840 ( 58) GGCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrIV:437555-438060 ( 23) GGCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrXII:167762-168257 ( 29) GGCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrXIV:632418-632895 ( 2) GCCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrVII:730960-731408 ( 12) GCCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrIII:127515-127919 ( 58) GCCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrII:266194-266673 ( 3) GGCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrIX:174485-175588 ( 53) GGCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrV:435596-435995 ( 42) GGCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrX:414773-414873 ( 20) GGCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrIV:1201501-1202017 ( 49) GGCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrVI:226326-227086 ( 67) GGCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrV:492211-492572 ( 46) GGCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrXV:340143-340589 ( 18) GGCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrXI:490752-491209 ( 46) GGCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrIX:183278-183708 ( 32) GCCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrXIV:602077-602560 ( 53) GCCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrXIV:725920-726396 ( 71) GCCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrXII:962826-963289 ( 10) GCCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrX:424273-424373 ( 33) GCCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrX:617703-617803 ( 46) GCCGAGTGGTTTAAGGCGTCAGATTTAGGT 1 chrXV:274448-275012 ( 1) GGCCGAGTGGTTAAGGCGATGCCCTGCTAT 1 chrXVI:435667-436199 ( 45) TGGCGCAGTGGTAGCGCAGCAGATTGCAAA 1 chrXVI:775624-776045 ( 16) TGGCGCAGTGGTAGCGCAGCAGATTGCAAA 1 chrII:642838-643252 ( 47) TGGCGCAGTGGTAGCGCAGCAGATTGCAAA 1 chrIII:149721-150196 ( 19) TGGCGCAGTGGAAGCGCGCAGGGCTCATAA 1 chrX:517631-517731 ( 28) TGGCGCAGTGGAAGCGCGCAGGGCTCATAA 1 chrXVI:338520-339283 ( 32) TGGCGCAGTGGAAGCGCGCAGGGCTCATAA 1 chrXIII:586401-586904 ( 69) GTCTAGTCGGTTATGGCATCTGCTTAACAC 1 chrXI:307897-308449 ( 56) GTCTAGTCGGTTATGGCATCTGCTTAACAC 1 chrXV:663579-664097 ( 59) GTCTAGTCGGTTATGGCATCTGCTTAACAC 1 chrVII:412058-412581 ( 60) GTCTAGTCGGTTATGGCATCTGCTTAACAC 1 chrVII:823344-823725 ( 7) GTCTAGTCGGTTATGGCATCTGCTTAACAC 1 chrXIII:837741-838232 ( 2) CCAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 chrX:354010-354110 ( 64) CCAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 chrVI:210460-210899 ( 39) CCAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 chrVI:167212-167684 ( 49) CCAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 chrXIII:131645-132097 ( 39) TGGCGTAATGGCAACGCGTCTGACTTCTAA 1 chrXI:219721-220131 ( 27) GGCGTAGTCGGTAGCGCGCTCCCTTAGCAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSRRWKGGKTARGGCGYMWGAYTRHWAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 9.49392 E= 3.8e-099 -1193 -92 189 -77 -1193 78 147 -125 -158 189 -11 -1193 -77 125 25 -125 42 -11 99 -357 23 -34 89 -125 23 -1193 -11 59 -357 -60 89 67 -1193 -60 172 -41 -1193 -1193 203 -58 -1193 -134 89 88 -199 -92 -1193 142 171 -1193 -1193 -1193 75 -134 54 -125 -1193 66 183 -1193 -1193 -1193 236 -1193 -1193 236 -1193 -1193 -25 -1193 194 -1193 -158 66 -34 51 23 140 -134 -257 42 -92 -34 12 -1193 -92 212 -257 101 -11 8 -1193 -1193 178 -1193 12 -1193 -1193 -1193 171 42 -11 54 -125 23 8 -34 -12 12 -34 -92 42 155 -1193 -92 -1193 118 -60 -1193 -77 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSRRWKGGKTARGGCGYMWGAYTRHWAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 39 E= 3.8e-099 0.000000 0.102564 0.717949 0.179487 0.000000 0.333333 0.538462 0.128205 0.102564 0.717949 0.179487 0.000000 0.179487 0.461538 0.230769 0.128205 0.410256 0.179487 0.384615 0.025641 0.358974 0.153846 0.358974 0.128205 0.358974 0.000000 0.179487 0.461538 0.025641 0.128205 0.358974 0.487179 0.000000 0.128205 0.641026 0.230769 0.000000 0.000000 0.794872 0.205128 0.000000 0.076923 0.358974 0.564103 0.076923 0.102564 0.000000 0.820513 1.000000 0.000000 0.000000 0.000000 0.512821 0.076923 0.282051 0.128205 0.000000 0.307692 0.692308 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.256410 0.000000 0.743590 0.000000 0.102564 0.307692 0.153846 0.435897 0.358974 0.512821 0.076923 0.051282 0.410256 0.102564 0.153846 0.333333 0.000000 0.102564 0.846154 0.051282 0.615385 0.179487 0.205128 0.000000 0.000000 0.666667 0.000000 0.333333 0.000000 0.000000 0.000000 1.000000 0.410256 0.179487 0.282051 0.128205 0.358974 0.205128 0.153846 0.282051 0.333333 0.153846 0.102564 0.410256 0.897436 0.000000 0.102564 0.000000 0.692308 0.128205 0.000000 0.179487 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GSCSRRWKGGKTARGGCGYMWGAYTRHWAA MEME-2 regular expression -------------------------------------------------------------------------------- G[GC]C[CG][AG][AG][TA][TG][GT][GT][TG]TA[AG][GC]GC[GA][TC][CA][AT]G[AG][CT]T[AG][ATC][TA]AA -------------------------------------------------------------------------------- Time 679.41 secs. ******************************************************************************** ******************************************************************************** MOTIF SAVAASCGMAMRTKMTAACCAYTAMACTA MEME-3 width = 29 sites = 17 llr = 419 E-value = 3.9e-054 ******************************************************************************** -------------------------------------------------------------------------------- Motif SAVAASCGMAMRTKMTAACCAYTAMACTA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 185a8::15644::5:77:18::859::a pos.-specific C 3:3::581335:1:5::1a9:6::5:a1: probability G 612:252711:6:5::32::2::2:1::: matrix T :1:::::11:1:95:a:::::4a::::9: bits 2.4 * * 2.1 * * 1.9 * * 1.7 * * * ** * * * Relative 1.4 * ** * ** * * * Entropy 1.2 **** ** * ****** **** (35.5 bits) 0.9 ** ***** ****** *********** 0.7 ** ***** ******************** 0.5 ******** ******************** 0.2 ***************************** 0.0 ----------------------------- Multilevel GAAAACCGAACGTTCTAACCACTAAACTA consensus C C GG CCAA GA G T GC sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAVAASCGMAMRTKMTAACCAYTAMACTA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrII:350624-351057 - 44 6.79e-15 TTGTCCGGAT CAAAACCGAAAGTGATAACCACTACACTA TAAAACCCTT chrIV:520499-521428 - 66 6.79e-15 CCGGAT CAAAACCGAAAGTGATAACCACTACACTA TAGGACCCTA chrIII:168125-168539 + 55 6.79e-15 TTGTCCGGAT CAAAACCGAAAGTGATAACCACTACACTA TAGGACCAGG chrIV:802537-803006 + 46 6.79e-15 TTGTCCGGAT CAAAACCGAAAGTGATAACCACTACACTA TAGGACCGAC chrXIII:808017-808542 + 53 1.24e-14 TTGTTCGGAT CAGAACCGAAAGTGATAACCACTACACTA TAGGACCTTT chrII:405701-406256 - 39 7.85e-14 TCTGGCACGC GACAAGCGCCCATTCTGACCATTAAACTA TCACGGAAGA chrXI:513108-513609 + 60 7.85e-14 TCTGGCACGC GACAAGCGCCCATTCTGACCATTAAACTA TCACGGAACG chrX:355184-355284 - 39 7.85e-14 TCTGGCACGC GACAAGCGCCCATTCTGACCATTAAACTA TCACGGAAGA chrX:374172-374272 + 1 7.85e-14 . GACAAGCGCCCATTCTGACCATTAAACTA TCACGGAAGA chrXV:571741-572151 - 69 7.85e-14 CGC GACAAGCGCCCATTCTGACCATTAAACTA TCACGGATTT chrIV:1075266-1075753 + 50 5.92e-11 CCTTTGCCGT GTGAAGGCAACGTGATAGCCGCTACACTA TTGGAACAAT chrXV:594216-594661 + 2 8.63e-11 T GGGAAGCATAAATTCTAACCACTGAACCA CTTGCGCGTT chrII:644978-645423 - 24 1.22e-10 TCTCCACGGT GAAAGCGTGATGTGATAGCCGTTACACTA TATCGGATAA chrIII:82368-82653 + 38 1.22e-10 TCTCCACGGT GAAAGCGTGATGTGATAGCCGTTACACTA TATCGGATAA chrVII:115328-115750 - 6 1.66e-10 AAATGCGCTT AAAAGCCGAACGCTCTACCAACTGAGCTA ACAAG chrIV:359346-359781 - 71 1.66e-10 T AAAAGCCGAACGCTCTACCAACTGAGCTA ACAAGGATGA chrIV:1256812-1257285 + 46 2.22e-10 CCCCATGCTT GGGAAGCATGAATTCTAACCACTGAACCA CTTTCGCTAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAVAASCGMAMRTKMTAACCAYTAMACTA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:350624-351057 6.8e-15 43_[-3]_28 chrIV:520499-521428 6.8e-15 65_[-3]_6 chrIII:168125-168539 6.8e-15 54_[+3]_17 chrIV:802537-803006 6.8e-15 45_[+3]_26 chrXIII:808017-808542 1.2e-14 52_[+3]_19 chrII:405701-406256 7.9e-14 38_[-3]_33 chrXI:513108-513609 7.9e-14 59_[+3]_12 chrX:355184-355284 7.9e-14 38_[-3]_33 chrX:374172-374272 7.9e-14 [+3]_71 chrXV:571741-572151 7.9e-14 68_[-3]_3 chrIV:1075266-1075753 5.9e-11 49_[+3]_22 chrXV:594216-594661 8.6e-11 1_[+3]_70 chrII:644978-645423 1.2e-10 23_[-3]_48 chrIII:82368-82653 1.2e-10 37_[+3]_34 chrVII:115328-115750 1.7e-10 5_[-3]_66 chrIV:359346-359781 1.7e-10 70_[-3]_1 chrIV:1256812-1257285 2.2e-10 45_[+3]_26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAVAASCGMAMRTKMTAACCAYTAMACTA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SAVAASCGMAMRTKMTAACCAYTAMACTA width=29 seqs=17 chrII:350624-351057 ( 44) CAAAACCGAAAGTGATAACCACTACACTA 1 chrIV:520499-521428 ( 66) CAAAACCGAAAGTGATAACCACTACACTA 1 chrIII:168125-168539 ( 55) CAAAACCGAAAGTGATAACCACTACACTA 1 chrIV:802537-803006 ( 46) CAAAACCGAAAGTGATAACCACTACACTA 1 chrXIII:808017-808542 ( 53) CAGAACCGAAAGTGATAACCACTACACTA 1 chrII:405701-406256 ( 39) GACAAGCGCCCATTCTGACCATTAAACTA 1 chrXI:513108-513609 ( 60) GACAAGCGCCCATTCTGACCATTAAACTA 1 chrX:355184-355284 ( 39) GACAAGCGCCCATTCTGACCATTAAACTA 1 chrX:374172-374272 ( 1) GACAAGCGCCCATTCTGACCATTAAACTA 1 chrXV:571741-572151 ( 69) GACAAGCGCCCATTCTGACCATTAAACTA 1 chrIV:1075266-1075753 ( 50) GTGAAGGCAACGTGATAGCCGCTACACTA 1 chrXV:594216-594661 ( 2) GGGAAGCATAAATTCTAACCACTGAACCA 1 chrII:644978-645423 ( 24) GAAAGCGTGATGTGATAGCCGTTACACTA 1 chrIII:82368-82653 ( 38) GAAAGCGTGATGTGATAGCCGTTACACTA 1 chrVII:115328-115750 ( 6) AAAAGCCGAACGCTCTACCAACTGAGCTA 1 chrIV:359346-359781 ( 71) AAAAGCCGAACGCTCTACCAACTGAGCTA 1 chrIV:1256812-1257285 ( 46) GGGAAGCATGAATTCTAACCACTGAACCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAVAASCGMAMRTKMTAACCAYTAMACTA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43200 bayes= 10.5398 E= 3.9e-054 -138 60 160 -1073 143 -1073 -72 -237 62 60 28 -1073 171 -1073 -1073 -1073 132 -1073 28 -1073 -1073 145 128 -1073 -1073 208 -14 -1073 -138 -172 186 -138 62 60 -72 -138 108 60 -172 -1073 43 128 -1073 -138 43 -1073 160 -1073 -1073 -72 -1073 153 -1073 -1073 128 79 62 145 -1073 -1073 -1073 -1073 -1073 171 121 -1073 60 -1073 121 -72 -14 -1073 -1073 236 -1073 -1073 -138 218 -1073 -1073 143 -1073 -14 -1073 -1073 160 -1073 43 -1073 -1073 -1073 171 132 -1073 28 -1073 79 128 -1073 -1073 153 -1073 -72 -1073 -1073 236 -1073 -1073 -1073 -72 -1073 153 171 -1073 -1073 -1073 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAVAASCGMAMRTKMTAACCAYTAMACTA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 17 E= 3.9e-054 0.117647 0.294118 0.588235 0.000000 0.823529 0.000000 0.117647 0.058824 0.470588 0.294118 0.235294 0.000000 1.000000 0.000000 0.000000 0.000000 0.764706 0.000000 0.235294 0.000000 0.000000 0.529412 0.470588 0.000000 0.000000 0.823529 0.176471 0.000000 0.117647 0.058824 0.705882 0.117647 0.470588 0.294118 0.117647 0.117647 0.647059 0.294118 0.058824 0.000000 0.411765 0.470588 0.000000 0.117647 0.411765 0.000000 0.588235 0.000000 0.000000 0.117647 0.000000 0.882353 0.000000 0.000000 0.470588 0.529412 0.470588 0.529412 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.705882 0.000000 0.294118 0.000000 0.705882 0.117647 0.176471 0.000000 0.000000 1.000000 0.000000 0.000000 0.117647 0.882353 0.000000 0.000000 0.823529 0.000000 0.176471 0.000000 0.000000 0.588235 0.000000 0.411765 0.000000 0.000000 0.000000 1.000000 0.764706 0.000000 0.235294 0.000000 0.529412 0.470588 0.000000 0.000000 0.882353 0.000000 0.117647 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.117647 0.000000 0.882353 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAVAASCGMAMRTKMTAACCAYTAMACTA MEME-3 regular expression -------------------------------------------------------------------------------- [GC]A[ACG]A[AG][CG]CG[AC][AC][CA][GA]T[TG][CA]T[AG]ACCA[CT]T[AG][AC]ACTA -------------------------------------------------------------------------------- Time 995.78 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:326464-327100 4.11e-06 67_[-1(1.54e-09)]_12 chrVIII:381389-383460 5.95e-01 100 chrXV:28413-30887 2.21e-01 100 chrVII:197927-199735 7.33e-01 100 chrXI:333952-335011 3.04e-01 100 chrI:166173-166619 2.54e-01 100 chrIV:1401108-1403440 5.86e-01 100 chrXVI:821590-822352 9.09e-01 100 chrXIII:729987-731137 6.32e-01 100 chrVII:533791-535175 9.98e-01 100 chrVII:397954-398210 2.79e-01 100 chrXI:517392-518204 1.22e-03 79_[-1(2.65e-06)] chrIV:667762-668251 4.07e-06 58_[-1(4.70e-10)]_21 chrIII:127515-127919 9.95e-08 57_[+2(1.15e-11)]_13 chrXVI:378661-378993 8.54e-01 100 chrIV:1095130-1095639 1.85e-03 43_[-1(4.45e-07)]_36 chrXII:95542-95863 3.44e-01 100 chrIX:336053-336627 1.19e-05 66_[-1(4.40e-09)]_13 chrXIV:568058-568597 2.02e-01 100 chrIV:976105-976664 5.37e-01 100 chrXII:605119-605609 4.03e-01 100 chrIX:332720-333130 8.56e-01 100 chrII:256234-257976 2.50e-01 100 chrXI:613267-613620 2.72e-01 100 chrXVI:108536-114782 1.57e-01 100 chrVII:400784-401619 8.72e-01 100 chrXV:722864-724837 3.55e-03 49_[-1(2.21e-06)]_30 chrXII:281920-282388 5.37e-01 100 chrVII:866256-867522 9.41e-01 100 chrXV:841523-843012 3.75e-01 100 chrXIII:222559-223921 7.40e-01 100 chrV:138452-141388 7.53e-01 100 chrXVI:585861-586177 1.03e-01 100 chrII:476865-477804 6.45e-01 100 chrIV:757511-758186 6.72e-01 100 chrXV:671031-671796 8.18e-01 100 chrIV:915283-916302 1.54e-01 100 chrXIII:808017-808542 7.30e-16 24_[-1(4.40e-09)]_7_[+3(1.24e-14)]_\ 19 chrVI:226326-227086 1.18e-16 39_[-1(1.35e-09)]_6_[-2(6.40e-11)]_\ 4 chrXII:867208-868381 1.64e-01 100 chrI:65800-67895 4.99e-01 100 chrX:617703-617803 4.90e-06 45_[+2(2.42e-09)]_25 chrVII:319244-320153 2.33e-01 100 chrVIII:504257-506178 1.86e-01 100 chrXII:1002269-1003582 6.23e-01 100 chrXIII:302738-303420 7.01e-01 100 chrXIV:240814-241763 7.18e-01 100 chrXIV:721128-723222 2.35e-01 100 chrVII:398461-400614 5.78e-01 100 chrXVI:768876-769483 8.78e-01 100 chrXIII:162940-164366 9.74e-01 100 chrIX:96778-97560 4.81e-01 100 chrXV:614549-616773 7.31e-01 100 chrXIII:296742-298915 7.10e-01 100 chrVII:930809-931626 6.86e-01 100 chrXII:167762-168257 1.21e-07 28_[-2(9.88e-12)]_42 chrX:424273-424373 8.21e-06 32_[-2(7.92e-10)]_38 chrVI:191302-191771 1.76e-03 34_[-1(1.40e-06)]_45 chrXVI:214607-215149 4.51e-01 100 chrVI:95471-95906 3.91e-01 100 chrXI:457999-458910 9.46e-01 100 chrXII:951013-954271 2.36e-01 100 chrXII:253705-255570 4.48e-01 100 chrXI:140780-143268 3.02e-01 100 chrV:235281-237188 1.69e-01 100 chrIV:992725-993201 7.81e-01 100 chrVII:205311-206416 3.57e-01 100 chrXIII:407839-408793 6.00e-02 100 chrXIV:172752-174726 6.96e-01 100 chrXIII:161920-162693 6.37e-01 100 chrXII:704263-704617 8.64e-01 100 chrVII:1057684-1058770 9.40e-02 100 chrXI:219721-220131 1.24e-11 26_[+2(4.36e-07)]_6_[+1(1.60e-08)]_\ 17 chrII:87861-88613 5.63e-01 100 chrXIII:67476-68100 6.42e-01 100 chrIII:78318-78908 2.39e-01 100 chrV:268991-270592 8.81e-01 100 chrXII:611595-612050 4.76e-02 100 chrIV:1161484-1162135 8.56e-01 100 chrXII:366026-366936 5.44e-03 32_[-1(3.00e-06)]_47 chrIII:150945-151515 4.12e-01 100 chrXVI:502874-503244 9.43e-01 100 chrVI:43332-44397 8.40e-01 100 chrXIV:664328-665601 7.71e-01 100 chrVII:823344-823725 1.73e-11 6_[+2(1.62e-08)]_6_[+1(1.54e-09)]_\ 37 chrXII:568029-570966 1.01e-01 100 chrXVI:338520-339283 1.66e-08 4_[-1(4.45e-07)]_6_[-2(1.09e-08)]_\ 39 chrXII:1017767-1019563 7.00e-01 100 chrXV:925178-925429 5.19e-01 100 chrVIII:115331-116414 2.61e-01 100 chrVI:222747-225319 8.50e-01 100 chrXI:107522-110454 7.27e-01 100 chrXV:988766-989524 1.90e-02 100 chrIV:229559-231289 2.66e-02 38_[-3(2.10e-05)]_33 chrXV:216290-216701 2.18e-01 100 chrVII:730960-731408 1.45e-11 11_[+2(1.15e-11)]_6_[+1(5.59e-07)]_\ 32 chrXVI:213090-214148 8.33e-02 100 chrXII:707972-710897 5.71e-01 100 chrXVI:810581-812020 1.41e-01 100 chrVIII:466799-467868 9.87e-01 100 chrV:443031-443358 3.63e-06 65_[-1(4.70e-10)]_14 chrXII:253016-253489 8.34e-01 100 chrXVI:586619-587552 5.84e-01 100 chrXIII:131645-132097 3.65e-09 11_[-1(3.74e-08)]_6_[-2(4.77e-08)]_\ 32 chrXII:498309-499856 2.99e-01 100 chrII:592249-593490 1.03e-02 3_[+2(9.05e-05)]_67 chrVIII:103895-105508 9.51e-01 100 chrXVI:901156-902160 8.32e-01 100 chrXIII:159255-160337 7.34e-01 100 chrXV:92048-94762 4.86e-01 100 chrXIII:220020-220959 4.09e-01 100 chrIX:99665-100015 5.72e-01 100 chrV:441802-442684 1.16e-01 100 chrVI:167212-167684 6.34e-05 48_[+2(1.89e-08)]_22 chrIX:388210-388824 7.62e-01 100 chrXVI:927772-928094 6.68e-01 100 chrXV:571741-572151 3.49e-09 68_[-3(7.85e-14)]_3 chrXII:1028791-1030257 5.30e-01 100 chrIX:25934-26618 5.22e-01 100 chrXV:424061-424725 4.63e-01 100 chrIV:411119-411656 2.49e-01 100 chrXIII:667654-668146 6.12e-01 100 chrVIII:174033-175733 8.45e-01 100 chrIV:541208-542046 9.82e-01 100 chrV:298852-301622 2.52e-01 100 chrVII:479169-482985 5.28e-01 100 chrXV:978811-979207 5.34e-02 100 chrXIII:797643-798219 7.85e-01 100 chrXV:845981-846272 6.90e-01 100 chrX:569348-569448 7.62e-01 100 chrVII:611829-613585 6.08e-01 100 chrIII:30548-31213 9.75e-01 100 chrXII:728771-730400 1.77e-01 100 chrXII:424085-424577 1.79e-01 100 chrXVI:770663-771057 4.22e-01 100 chrXIII:671871-674798 3.88e-01 100 chrXIV:442773-444795 4.33e-01 100 chrIV:1201501-1202017 1.81e-10 48_[+2(6.40e-11)]_22 chrVII:483310-483743 2.02e-03 9_[+1(6.98e-07)]_70 chrXI:558655-559490 5.22e-01 100 chrXI:364443-365270 8.00e-01 100 chrII:304658-305926 5.44e-01 100 chrXI:666627-666789 2.76e-01 100 chrII:347399-347936 1.73e-04 43_[-1(8.94e-08)]_36 chrIV:1012573-1013928 9.85e-01 100 chrIV:802537-803006 5.14e-17 17_[-1(4.70e-10)]_7_[+3(6.79e-15)]_\ 26 chrVII:412058-412581 1.73e-11 32_[-1(1.54e-09)]_6_[-2(1.62e-08)]_\ 11 chrX:606154-606254 6.22e-01 100 chrIV:359346-359781 3.05e-06 70_[-3(1.66e-10)]_1 chrVII:1003978-1004429 9.72e-02 100 chrXIV:61639-64626 3.06e-01 100 chrVII:959889-961703 7.29e-01 100 chrXIII:511099-512169 9.85e-01 100 chrXIII:122999-124255 6.90e-01 100 chrIV:835780-837984 8.73e-01 100 chrV:130804-131384 8.30e-06 45_[-1(4.70e-10)]_34 chrVII:541718-542149 1.51e-06 9_[+1(8.86e-11)]_70 chrX:115794-115894 8.57e-01 100 chrIV:322139-323647 3.12e-01 100 chrIV:76898-77464 1.87e-01 100 chrVII:1050213-1051586 3.07e-01 100 chrXIII:300851-302528 3.67e-01 100 chrV:460505-462107 4.77e-01 100 chrI:81851-82301 1.46e-01 100 chrIV:491409-492675 5.59e-01 100 chrXII:513327-514817 9.24e-01 100 chrXIII:23988-25908 2.39e-01 100 chrIV:538849-539274 2.39e-01 100 chrX:531600-531700 9.80e-01 100 chrXV:87366-88587 5.65e-01 100 chrX:204539-204639 4.43e-05 19_[+1(4.40e-09)]_60 chrXV:135721-137648 5.78e-01 100 chrXI:382719-384748 1.79e-01 100 chrIII:168125-168539 5.14e-17 26_[-1(4.70e-10)]_7_[+3(6.79e-15)]_\ 17 chrVIII:62559-62950 4.08e-04 57_[-3(6.80e-08)]_14 chrXIV:569655-570090 7.96e-07 52_[-1(4.70e-10)]_27 chrX:414773-414873 1.18e-16 19_[+2(6.40e-11)]_6_[+1(1.35e-09)]_\ 24 chrIV:1150710-1151176 3.20e-02 10_[-2(4.23e-05)]_60 chrX:374172-374272 3.77e-15 [+3(7.85e-14)]_25_[-1(3.74e-08)]_25 chrIV:599799-600274 1.27e-01 100 chrII:504529-505165 8.92e-01 100 chrXVI:829008-829413 8.12e-01 100 chrV:305827-307478 2.35e-01 100 chrIX:138217-139161 3.55e-01 100 chrXVI:819164-821378 6.96e-01 100 chrXV:663579-664097 1.73e-11 31_[-1(1.54e-09)]_6_[-2(1.62e-08)]_\ 12 chrXI:74405-75045 5.22e-01 100 chrXV:79729-81512 4.94e-01 100 chrX:360247-360347 1.99e-01 100 chrIV:433564-433837 2.86e-01 100 chrIV:1491972-1492387 6.63e-01 100 chrIV:392542-392937 2.73e-02 100 chrXII:875143-877381 8.75e-01 100 chrXII:92267-92730 9.31e-01 100 chrXVI:55848-56425 4.81e-01 100 chrVII:989821-990370 8.13e-01 100 chrXIV:771659-772504 5.39e-02 100 chrX:526172-526272 4.10e-01 100 chrVIII:119640-121874 5.42e-01 100 chrX:355184-355284 1.96e-15 38_[-3(7.85e-14)]_7_[+1(4.40e-09)]_\ 5 chrXV:24293-24814 1.05e-01 66_[-2(4.83e-05)]_4 chrXIII:861186-861438 4.45e-01 100 chrII:604084-607364 5.60e-01 100 chrXIV:518676-519131 1.34e-01 100 chrII:236499-237350 8.83e-01 100 chrIV:1239339-1240621 9.25e-01 100 chrV:363622-364029 6.10e-01 100 chrX:223703-223803 4.61e-01 100 chrVII:328395-329015 6.14e-01 100 chrII:117502-118267 2.76e-01 100 chrXVI:451200-453306 2.90e-01 100 chrIII:107093-107864 5.82e-01 100 chrII:45545-46828 1.19e-01 100 chrXII:426924-427478 9.93e-06 23_[+1(4.40e-09)]_56 chrXV:252825-254992 4.82e-01 100 chrXII:962826-963289 6.13e-06 9_[-2(7.92e-10)]_61 chrXII:949024-949995 6.44e-01 100 chrXVI:247164-248798 9.50e-01 100 chrII:226976-227363 1.64e-03 8_[+1(9.98e-07)]_71 chrXV:234190-234762 7.00e-01 100 chrXIII:625887-627304 8.34e-01 100 chrXI:774-1063 5.23e-01 100 chrIV:489618-491227 8.65e-02 100 chrXV:979765-981126 3.99e-01 100 chrX:196737-196837 7.28e-02 100 chrIV:946129-946618 3.53e-04 48_[+1(4.45e-07)]_31 chrIV:465184-465626 8.16e-01 100 chrXII:780619-781868 8.85e-01 100 chrIV:600654-602398 3.26e-01 100 chrIV:720592-722090 9.08e-01 100 chrVII:316183-317417 4.37e-01 100 chrXV:899844-901268 8.97e-01 100 chrVII:370511-371708 3.16e-01 100 chrXV:758918-759614 5.47e-01 100 chrXII:257630-259550 8.35e-01 100 chrV:435596-435995 1.18e-16 14_[-1(1.35e-09)]_6_[-2(6.40e-11)]_\ 29 chrXIII:253318-254334 7.10e-01 100 chrIX:68261-69605 3.98e-01 100 chrIII:162020-164356 3.57e-01 100 chrXIV:87409-88717 1.86e-01 100 chrI:138988-139362 6.06e-02 100 chrII:36241-36828 1.07e-01 100 chrV:77520-79966 6.88e-01 100 chrVI:63989-65345 6.99e-01 100 chrXV:391157-391960 3.48e-01 100 chrVI:157895-158306 7.02e-01 100 chrXVI:731610-732366 3.79e-01 100 chrV:51786-53308 9.75e-01 100 chrXV:487439-487754 2.97e-01 100 chrIV:1256812-1257285 1.18e-14 17_[-1(7.59e-12)]_7_[+3(2.22e-10)]_\ 26 chrXI:158230-159644 4.23e-02 100 chrIII:90850-91100 2.83e-02 100 chrIV:519656-519952 1.79e-04 46_[-1(8.94e-08)]_33 chrXII:1028204-1028566 4.12e-01 100 chrXII:919402-924168 8.12e-02 100 chrVIII:144355-146476 2.69e-01 100 chrXVI:701829-702329 8.00e-01 100 chrXVI:215371-215585 2.39e-01 100 chrXI:258415-259977 6.50e-01 100 chrIX:127442-130186 7.50e-01 100 chrII:332136-334224 9.65e-01 100 chrIX:332288-332527 3.20e-01 100 chrV:322001-323293 9.98e-01 100 chrXV:1027792-1029081 1.23e-01 100 chrIII:316208-316588 1.57e-02 1_[-3(7.30e-06)]_70 chrVII:440198-443504 3.79e-01 100 chrII:306963-307328 4.67e-01 100 chrXIII:557396-558582 3.22e-01 100 chrIX:254250-254527 7.16e-02 100 chrXVI:642039-643381 1.40e-01 100 chrXI:430632-433253 4.19e-01 100 chrXII:805771-807130 4.89e-01 100 chrXIII:287969-289998 1.98e-01 100 chrVIII:125905-127765 5.98e-01 100 chrXVI:39367-40614 8.94e-01 100 chrV:413444-414219 3.85e-01 100 chrII:9457-9968 2.90e-01 100 chrXIII:872598-872977 1.71e-01 100 chrIX:25045-25270 5.76e-01 100 chrV:487084-487598 3.14e-07 47_[-1(8.86e-11)]_32 chrXIV:216219-216968 3.68e-01 100 chrXIV:725920-726396 6.13e-10 30_[+1(8.94e-08)]_19_[-2(7.92e-10)] chrXII:515224-516979 5.50e-01 100 chrVII:876156-878199 7.25e-01 100 chrXII:628173-628747 5.35e-02 100 chrVII:323440-324741 6.02e-01 100 chrVIII:400981-402018 1.13e-01 100 chrXI:38499-39315 4.78e-01 100 chrV:122083-123027 2.37e-01 100 chrXII:368649-372615 3.67e-01 100 chrVII:345779-346688 1.87e-01 100 chrVII:121974-122885 3.03e-01 100 chrIV:980674-981158 5.09e-01 100 chrVI:180690-181265 3.45e-07 54_[-1(8.86e-11)]_25 chrVII:766127-766493 1.06e-02 52_[-2(4.12e-05)]_18 chrXII:930279-931893 2.74e-01 100 chrXII:720624-721468 5.11e-01 100 chrII:642838-643252 2.49e-10 19_[-1(1.07e-07)]_6_[-2(4.64e-09)]_\ 24 chrVI:210460-210899 1.10e-05 38_[-2(1.89e-08)]_32 chrV:53526-53910 7.49e-01 100 chrXV:976383-976923 2.24e-01 100 chrXI:67802-69474 1.15e-01 100 chrXII:1011768-1011975 4.14e-02 100 chrVIII:388643-389003 1.13e-01 100 chrXII:645870-646216 9.47e-02 100 chrX:622270-622370 5.51e-01 100 chrXII:329406-329607 8.53e-01 100 chrV:60923-62172 9.35e-01 100 chrXIII:320961-321324 6.55e-05 62_[-1(1.60e-08)]_17 chrX:354010-354110 5.48e-05 63_[+2(1.89e-08)]_7 chrIV:568700-569351 2.60e-05 31_[+1(4.40e-09)]_48 chrVII:706894-707185 9.91e-01 100 chrXVI:75348-76788 8.77e-01 100 chrIV:542645-543088 3.94e-01 100 chrXIV:525072-525269 1.45e-01 100 chrXIII:747356-748149 9.55e-01 100 chrVII:255160-255676 4.42e-01 100 chrIX:255024-257184 2.63e-01 100 chrIII:295305-295975 8.50e-01 100 chrXIV:234267-235696 6.10e-01 100 chrV:101811-102643 2.97e-01 100 chrXII:282741-284020 7.97e-01 100 chrXI:490752-491209 2.06e-09 45_[+2(7.31e-11)]_25 chrV:362633-363320 5.67e-02 34_[+3(6.14e-05)]_37 chrXVI:188367-189069 3.97e-01 100 chrVIII:147587-148791 7.76e-01 100 chrV:307647-307808 8.65e-01 100 chrXV:909364-911639 2.26e-01 100 chrXV:109650-111193 1.30e-01 100 chrXIV:413532-417326 4.68e-01 100 chrXIV:602077-602560 2.56e-07 52_[+2(9.49e-11)]_18 chrXIV:96026-96461 2.87e-06 55_[-1(4.40e-09)]_24 chrXI:282604-284911 5.18e-01 100 chrV:354675-355338 4.51e-07 20_[+1(8.86e-11)]_59 chrV:550912-551561 3.45e-01 100 chrX:292486-292586 8.18e-02 100 chrVII:115328-115750 4.63e-14 5_[-3(1.66e-10)]_31_[+1(3.40e-09)]_\ 14 chrXV:795805-798830 5.25e-01 100 chrXII:201645-202730 3.08e-01 100 chrXIV:546538-547452 1.83e-01 100 chrXIII:388330-390937 4.61e-01 100 chrV:222632-225274 4.17e-02 100 chrXIII:540382-540863 5.71e-02 100 chrXIII:225149-226930 2.94e-01 100 chrII:563216-564589 6.35e-01 100 chrXV:340143-340589 2.06e-09 17_[-2(7.31e-11)]_53 chrXVI:653924-655345 4.16e-01 100 chrX:391806-391906 9.23e-01 100 chrVII:968860-969420 6.15e-01 100 chrXIV:253190-254158 5.47e-02 100 chrXV:832178-834153 1.51e-02 100 chrVII:805866-807812 2.77e-01 100 chrXII:348025-348798 6.94e-01 100 chrIV:355146-357026 3.93e-01 100 chrXV:594216-594661 1.14e-06 1_[+3(8.63e-11)]_70 chrXII:929870-930060 5.11e-01 100 chrIV:913969-914824 3.84e-01 100 chrVIII:34383-36176 8.01e-01 100 chrXVI:718310-720038 2.69e-01 100 chrXV:31090-32222 8.12e-01 100 chrXII:737732-738474 9.61e-01 100 chrIV:1352044-1353080 8.44e-01 100 chrXV:217160-218439 1.61e-01 100 chrIV:218295-218737 4.43e-01 100 chrXII:374184-374686 8.17e-05 13_[+1(6.74e-08)]_66 chrXII:975777-976184 1.01e-03 60_[-1(5.59e-07)]_19 chrXVI:794461-796172 3.14e-01 100 chrVII:700259-701255 1.29e-05 20_[+1(2.00e-08)]_59 chrXIV:575067-576427 5.06e-01 100 chrIV:385527-388384 2.26e-02 2_[-2(4.01e-05)]_68 chrXV:384672-385022 4.49e-01 100 chrX:422725-422825 2.72e-03 [-1(3.18e-06)]_79 chrX:517631-517731 1.66e-08 [-1(4.45e-07)]_6_[-2(1.09e-08)]_43 chrVII:648078-648503 6.57e-01 100 chrVIII:142646-143288 4.61e-01 100 chrXIV:631523-632129 2.20e-08 77_[-1(1.29e-12)]_2 chrX:607911-608011 5.83e-01 100 chrII:555821-558470 6.96e-01 100 chrII:415554-415851 8.24e-01 100 chrXI:164935-165462 2.83e-01 100 chrVI:53218-54879 4.76e-01 100 chrXI:46713-47003 6.76e-01 100 chrXIV:626066-627059 8.30e-01 100 chrX:651837-651937 7.89e-02 100 chrXV:903943-904682 9.05e-01 100 chrII:611939-614312 3.83e-01 100 chrIV:1449882-1451776 9.60e-01 100 chrV:438528-439000 1.34e-06 30_[+1(1.54e-09)]_49 chrII:478940-479444 2.56e-01 100 chrX:233698-233798 1.81e-01 100 chrXI:307897-308449 1.73e-11 28_[-1(1.54e-09)]_6_[-2(1.62e-08)]_\ 15 chrVII:648737-649359 3.00e-02 100 chrIX:141336-141654 5.43e-01 100 chrIV:520499-521428 1.11e-10 65_[-3(6.79e-15)]_6 chrVII:878555-879029 9.27e-02 100 chrIV:488438-489147 4.23e-06 62_[-1(1.54e-09)]_17 chrVIII:148969-149561 5.36e-01 100 chrXIV:560147-560991 4.39e-01 100 chrVII:473518-474496 9.10e-01 100 chrVII:555061-558229 9.46e-01 100 chrXIII:873847-874035 7.32e-01 100 chrXVI:572187-572609 4.69e-01 100 chrXV:520606-520933 1.77e-01 100 chrXV:287198-288437 2.34e-01 100 chrXIII:837741-838232 1.31e-08 1_[+2(1.89e-08)]_20_[+1(4.45e-07)]_\ 28 chrVII:364866-366759 8.74e-01 100 chrIV:927552-930365 4.78e-01 100 chrV:135177-136035 6.68e-01 100 chrXIV:417584-418522 7.04e-01 100 chrVII:437133-440001 4.60e-01 100 chrX:538018-538118 6.09e-01 100 chrXV:159185-160744 3.01e-01 100 chrXII:214630-215063 7.87e-01 100 chrX:745027-745127 1.28e-01 100 chrIV:1301544-1302531 7.18e-01 100 chrVII:726427-728736 4.67e-01 100 chrXI:513108-513609 1.96e-15 31_[-1(4.40e-09)]_7_[+3(7.85e-14)]_\ 12 chrXIV:229585-230833 1.21e-01 100 chrV:288150-288721 8.82e-03 65_[-1(5.61e-06)]_14 chrXIV:104591-105148 5.43e-05 29_[+1(8.15e-08)]_50 chrXV:631865-632226 3.33e-01 100 chrXVI:775624-776045 3.27e-06 15_[-2(4.64e-09)]_55 chrXIII:195927-196307 2.95e-06 8_[-1(8.12e-09)]_71 chrXIV:776668-777323 3.62e-02 22_[+1(5.87e-05)]_57 chrII:680290-682469 4.74e-01 100 chrXIII:499028-500789 6.48e-01 100 chrVI:82408-84484 8.62e-01 100 chrXIII:378890-379621 1.02e-01 100 chrIII:85-1067 1.14e-01 100 chrV:249777-250511 6.56e-02 100 chrI:142130-143704 2.16e-01 100 chrXIII:549846-553242 4.84e-01 100 chrV:41763-42713 1.56e-01 100 chrXVI:121848-125360 5.84e-01 100 chrVII:938970-940000 8.32e-01 100 chrXII:636660-639981 8.99e-02 100 chrXII:837632-839446 8.27e-03 50_[-3(2.20e-05)]_21 chrVII:227321-228431 3.86e-01 100 chrX:157496-157596 7.00e-01 100 chrXVI:860150-860703 2.60e-07 44_[+1(8.86e-11)]_35 chrX:662473-662573 8.28e-02 100 chrXV:259283-259978 4.82e-01 100 chrXIV:783776-784319 7.09e-01 100 chrXV:464273-464709 6.06e-02 100 chrXIII:463330-463894 9.84e-06 34_[+1(4.40e-09)]_45 chrXVI:879606-880563 6.60e-01 100 chrIV:437555-438060 7.83e-11 22_[+2(9.88e-12)]_15_[+1(9.98e-07)]_\ 12 chrVII:1019552-1021903 7.50e-01 100 chrXV:680311-680967 9.92e-01 100 chrXIII:759054-763211 8.47e-01 100 chrX:348803-348903 4.84e-01 100 chrIX:141861-142463 5.73e-03 20_[+3(6.66e-05)]_51 chrXII:656825-657230 3.80e-01 100 chrXII:627734-627984 4.12e-02 100 chrIII:82368-82653 3.19e-14 9_[-1(8.86e-11)]_7_[+3(1.22e-10)]_\ 34 chrIV:410143-410805 3.61e-02 100 chrXV:605060-606177 1.48e-01 100 chrV:99886-100348 8.39e-02 100 chrII:544593-544788 8.44e-01 100 chrX:453353-453453 5.20e-01 100 chrXV:854006-854853 4.81e-02 100 chrXIV:289355-291481 4.28e-01 100 chrIX:394349-395634 6.77e-01 100 chrII:44970-45337 1.86e-01 100 chrV:434377-435138 3.30e-01 100 chrXIII:768200-768439 9.97e-01 100 chrIV:1075266-1075753 6.32e-14 20_[-1(2.15e-10)]_8_[+3(5.92e-11)]_\ 22 chrXI:21319-21807 4.44e-01 100 chrIV:1236397-1238477 9.25e-01 100 chrVII:287-1244 1.03e-01 22_[-2(7.73e-05)]_48 chrVII:798459-800269 1.23e-01 100 chrXII:728310-728547 2.29e-01 100 chrV:377922-380441 6.16e-01 100 chrIV:722419-722745 5.18e-01 100 chrIX:325740-326197 6.64e-01 100 chrXIII:701702-703267 9.60e-02 100 chrIV:1305421-1305840 6.25e-08 57_[+2(9.88e-12)]_13 chrIV:1175748-1176095 1.86e-03 1_[+1(3.81e-07)]_78 chrIV:1461510-1461844 3.34e-01 100 chrVI:31652-32236 7.60e-01 100 chrXVI:645367-646195 9.98e-01 100 chrIV:555388-556653 7.98e-01 100 chrXI:202289-203241 3.30e-01 100 chrII:350624-351057 5.14e-17 43_[-3(6.79e-15)]_7_[+1(4.70e-10)] chrXI:230960-231578 9.51e-03 9_[-1(1.60e-05)]_70 chrIV:434014-434882 9.52e-01 100 chrIX:197395-198198 3.21e-01 100 chrX:415739-415839 5.49e-05 4_[-1(1.40e-07)]_75 chrV:176876-177451 3.19e-07 28_[+1(8.86e-11)]_51 chrXVI:404459-407953 8.80e-01 100 chrIII:262705-263210 8.14e-01 100 chrIII:123170-123823 2.47e-01 100 chrXIII:306075-307209 5.81e-01 100 chrIV:1488482-1490433 9.98e-01 100 chrX:138887-138987 2.65e-01 100 chrXI:355222-356983 4.33e-02 28_[-3(2.66e-05)]_43 chrXII:855649-857616 4.46e-01 100 chrXV:226459-226898 5.97e-01 100 chrXVI:209219-210470 2.75e-01 100 chrV:225502-225709 2.59e-01 100 chrV:311698-312314 1.48e-05 74_[-1(1.01e-09)]_5 chrIV:129766-130980 1.00e+00 100 chrV:23449-23865 6.63e-01 100 chrXV:274448-275012 1.36e-08 [+2(3.53e-09)]_34_[+1(1.40e-06)]_15 chrII:644978-645423 3.19e-14 23_[-3(1.22e-10)]_7_[+1(8.86e-11)]_\ 20 chrIV:1300404-1301315 7.10e-01 100 chrXII:712232-713608 6.33e-01 100 chrVII:310492-312401 1.47e-01 100 chrIV:357485-358652 8.23e-01 100 chrXV:866502-868158 8.09e-01 100 chrVII:845271-845952 6.47e-01 100 chrXIV:756194-760016 8.31e-01 100 chrXIII:886977-890400 4.96e-01 100 chrX:540916-541016 9.99e-01 100 chrVII:254126-254822 5.68e-01 100 chrX:156164-156264 1.10e-01 100 chrVII:544411-546046 9.75e-01 100 chrXIII:372208-372658 1.95e-07 12_[-2(2.58e-05)]_27_[-1(1.54e-09)]_\ 10 chrVII:828414-828981 2.77e-01 100 chrXV:912003-912617 9.88e-01 100 chrXIII:650824-652993 8.40e-01 100 chrVIII:379639-379861 5.90e-03 28_[-1(2.50e-06)]_51 chrXII:1012159-1012616 7.35e-01 100 chrIV:769491-770121 5.66e-01 100 chrVIII:410993-411760 9.67e-01 100 chrVIII:296725-297192 9.00e-01 100 chrXII:793779-797611 3.09e-01 100 chrIII:149721-150196 1.66e-08 18_[+2(1.09e-08)]_6_[+1(4.45e-07)]_\ 25 chrIII:315609-316043 2.74e-01 100 chrIX:299963-300468 6.04e-06 70_[-1(1.35e-09)]_9 chrVII:856553-857670 5.91e-01 100 chrIII:142020-142966 7.03e-01 100 chrXI:98808-100095 6.61e-02 100 chrVI:136980-137698 3.39e-01 100 chrII:59526-61224 9.29e-01 100 chrVII:846935-848335 2.56e-02 7_[+2(3.05e-05)]_63 chrXIV:302554-303799 6.68e-01 100 chrXII:897438-899782 4.50e-01 100 chrIX:370227-370741 2.09e-07 25_[+1(8.86e-11)]_54 chrII:530950-532264 2.76e-01 100 chrXII:826929-827854 3.37e-01 100 chrVII:610391-611499 4.98e-02 100 chrXVI:435667-436199 2.49e-10 17_[-1(1.07e-07)]_6_[-2(4.64e-09)]_\ 26 chrXV:977181-978354 7.80e-01 100 chrXI:163265-164498 1.60e-01 100 chrX:523462-523562 8.14e-01 100 chrII:405701-406256 1.96e-15 38_[-3(7.85e-14)]_7_[+1(4.40e-09)]_\ 5 chrV:85093-86961 9.72e-01 100 chrVII:599334-601276 5.93e-01 100 chrXV:1053892-1054330 6.39e-02 100 chrX:120257-120357 4.32e-02 100 chrXIII:586401-586904 1.73e-11 41_[-1(1.54e-09)]_6_[-2(1.62e-08)]_\ 2 chrIX:174485-175588 1.00e-07 52_[+2(1.34e-11)]_18 chrX:172695-172795 9.60e-01 100 chrV:117335-118327 1.42e-01 100 chrXII:783910-784588 7.70e-01 100 chrVII:736176-736618 2.39e-05 35_[+1(3.74e-08)]_44 chrXV:968090-968477 2.58e-01 100 chrIV:1080510-1081019 6.62e-01 100 chrXII:47492-49578 9.14e-01 100 chrIV:884251-886612 5.96e-01 100 chrVII:185348-185924 7.70e-01 100 chrXV:300898-301727 9.93e-01 100 chrXVI:692822-695059 6.64e-03 18_[+1(3.58e-05)]_61 chrIV:330984-332985 9.51e-01 100 chrII:301078-301693 8.96e-01 100 chrXII:932103-932530 4.48e-01 100 chrVI:219952-222258 8.21e-01 100 chrII:266194-266673 7.63e-12 2_[+2(1.34e-11)]_6_[+1(8.15e-08)]_\ 41 chrXIV:186991-187593 9.87e-01 100 chrXI:162073-162790 4.99e-01 100 chrVIII:475433-475911 7.87e-01 100 chrXII:731369-732330 7.36e-01 100 chrX:90627-90727 9.92e-01 100 chrXI:578697-579378 6.11e-06 44_[+1(3.40e-09)]_35 chrVIII:451187-453157 8.70e-01 100 chrXII:447875-449066 1.09e-02 100 chrVII:422885-423516 5.35e-02 100 chrXIV:282052-283435 4.18e-01 100 chrXIII:168232-169047 8.97e-01 100 chrXIV:632418-632895 1.45e-11 1_[+2(1.15e-11)]_6_[+1(5.59e-07)]_\ 42 chrXIII:507166-509338 3.27e-02 100 chrXIV:330788-332645 6.27e-01 100 chrXII:459601-460744 6.61e-01 100 chrIV:1162506-1164670 1.00e-01 100 chrI:28586-28888 7.28e-01 100 chrIV:427212-428725 6.39e-01 100 chrXIV:88907-89909 6.93e-01 100 chrXVI:100768-101355 4.82e-01 100 chrV:431014-432017 9.54e-01 100 chrXV:408903-409978 7.22e-01 100 chrV:241998-242513 3.48e-01 100 chrXVI:432501-434364 5.39e-01 100 chrV:492211-492572 2.08e-13 18_[-1(6.74e-08)]_6_[-2(7.31e-11)]_\ 25 chrVIII:385128-386935 7.54e-01 100 chrXII:440426-441613 6.34e-02 47_[+3(3.37e-05)]_24 chrIX:183278-183708 7.98e-14 4_[-1(4.70e-10)]_6_[-2(9.49e-11)]_\ 39 chrII:197260-197858 2.64e-07 29_[+1(4.70e-10)]_50 chrIII:57396-60954 9.76e-03 12_[+3(4.52e-05)]_59 chrV:422853-425458 3.97e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************