******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MCM1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:373080-375684 1.0000 100 chrVIII:302320-303318 1.0000 100 chrXIV:725664-726391 1.0000 100 chrVII:254152-254811 1.0000 100 chrXI:490773-491267 1.0000 100 chrI:171113-172239 1.0000 100 chrIV:1362063-1362830 1.0000 100 chrXVI:810582-811830 1.0000 100 chrXIII:625836-627311 1.0000 100 chrVII:541723-542167 1.0000 100 chrVII:405469-405898 1.0000 100 chrXI:612597-613024 1.0000 100 chrIV:749912-751360 1.0000 100 chrIII:137749-139349 1.0000 100 chrXVI:376900-377390 1.0000 100 chrIV:1095076-1095670 1.0000 100 chrXII:214576-215063 1.0000 100 chrIX:325748-326372 1.0000 100 chrXIV:499106-502804 1.0000 100 chrIV:980701-981150 1.0000 100 chrXII:628180-628989 1.0000 100 chrIX:321541-324375 1.0000 100 chrII:299627-300293 1.0000 100 chrXII:92310-92970 1.0000 100 chrXVI:75340-77290 1.0000 100 chrVII:412062-412595 1.0000 100 chrXV:671149-671818 1.0000 100 chrXII:366046-366557 1.0000 100 chrVII:823339-823729 1.0000 100 chrXV:779725-781018 1.0000 100 chrXIII:168227-169382 1.0000 100 chrV:207355-208214 1.0000 100 chrXVI:572181-573377 1.0000 100 chrII:555817-556043 1.0000 100 chrIV:769516-771009 1.0000 100 chrXV:593923-594125 1.0000 100 chrIV:913960-916292 1.0000 100 chrXIII:752981-754295 1.0000 100 chrVII:121902-122971 1.0000 100 chrXII:809782-815791 1.0000 100 chrVIII:358283-358762 1.0000 100 chrX:622135-622235 1.0000 100 chrVII:362324-364460 1.0000 100 chrVIII:487472-488226 1.0000 100 chrXII:962815-963316 1.0000 100 chrXIII:267421-268333 1.0000 100 chrXIV:104600-105280 1.0000 100 chrXIV:602085-602575 1.0000 100 chrVII:422898-423575 1.0000 100 chrXVI:768592-769478 1.0000 100 chrXIII:145832-146242 1.0000 100 chrIX:68279-68480 1.0000 100 chrXV:504905-505479 1.0000 100 chrXIII:253326-253615 1.0000 100 chrVII:876180-879025 1.0000 100 chrXII:241689-243535 1.0000 100 chrX:453336-453436 1.0000 100 chrVII:56432-59230 1.0000 100 chrXVI:280527-281861 1.0000 100 chrVI:167251-167729 1.0000 100 chrXI:567194-567471 1.0000 100 chrXII:932109-932490 1.0000 100 chrXII:299871-301470 1.0000 100 chrXI:202321-203227 1.0000 100 chrV:298863-302090 1.0000 100 chrIV:1012745-1013923 1.0000 100 chrVII:277035-278730 1.0000 100 chrXIII:352073-353603 1.0000 100 chrXIV:61442-64556 1.0000 100 chrXIII:131623-132109 1.0000 100 chrXII:710482-711585 1.0000 100 chrVIII:54206-54678 1.0000 100 chrXI:307893-308434 1.0000 100 chrXII:231922-234261 1.0000 100 chrXIII:23935-25996 1.0000 100 chrIII:107054-107849 1.0000 100 chrV:354677-355361 1.0000 100 chrXII:636683-640337 1.0000 100 chrIV:1175747-1176114 1.0000 100 chrXII:406819-407581 1.0000 100 chrVII:287149-287779 1.0000 100 chrXVI:435653-436195 1.0000 100 chrVI:106543-106873 1.0000 100 chrXIV:585403-586769 1.0000 100 chrVII:786760-788729 1.0000 100 chrXII:605133-605613 1.0000 100 chrII:80953-84151 1.0000 100 chrXII:1017747-1019544 1.0000 100 chrXV:903639-904656 1.0000 100 chrVIII:113825-116394 1.0000 100 chrVII:120734-121262 1.0000 100 chrIII:149715-150190 1.0000 100 chrXV:1003894-1004941 1.0000 100 chrIV:340190-341602 1.0000 100 chrXV:109884-111486 1.0000 100 chrVII:700406-701259 1.0000 100 chrXVI:209944-210497 1.0000 100 chrXII:713060-713701 1.0000 100 chrXVI:794543-796226 1.0000 100 chrVIII:475472-475896 1.0000 100 chrV:545586-546602 1.0000 100 chrIII:142067-142960 1.0000 100 chrXVI:577083-581218 1.0000 100 chrXIII:91773-92120 1.0000 100 chrXII:533974-535901 1.0000 100 chrXVI:749712-753058 1.0000 100 chrVIII:103721-105496 1.0000 100 chrXVI:880023-880580 1.0000 100 chrXIII:123011-124227 1.0000 100 chrXV:32078-32253 1.0000 100 chrXIII:162950-164381 1.0000 100 chrIX:96792-97618 1.0000 100 chrV:510215-512305 1.0000 100 chrVI:222691-225293 1.0000 100 chrV:60987-62165 1.0000 100 chrXVI:927764-928169 1.0000 100 chrXV:464293-464781 1.0000 100 chrXII:1028813-1030313 1.0000 100 chrIII:846-1052 1.0000 100 chrXV:377826-379606 1.0000 100 chrVII:702786-704344 1.0000 100 chrXIII:586372-586910 1.0000 100 chrVIII:225384-226972 1.0000 100 chrIV:619734-620188 1.0000 100 chrV:396053-398091 1.0000 100 chrII:9471-10169 1.0000 100 chrXV:979728-981324 1.0000 100 chrII:477097-477773 1.0000 100 chrXV:832212-833430 1.0000 100 chrX:607922-608022 1.0000 100 chrVII:640258-642104 1.0000 100 chrX:517648-517748 1.0000 100 chrXII:728740-730623 1.0000 100 chrXII:448502-448949 1.0000 100 chrII:680290-682104 1.0000 100 chrI:182177-183145 1.0000 100 chrXIV:374693-375136 1.0000 100 chrIV:1245613-1246169 1.0000 100 chrVII:545102-546060 1.0000 100 chrII:236470-237401 1.0000 100 chrXI:551578-552684 1.0000 100 chrV:266228-268266 1.0000 100 chrXII:209988-212395 1.0000 100 chrXV:594306-594677 1.0000 100 chrII:87904-88598 1.0000 100 chrIV:884252-884677 1.0000 100 chrVII:483292-483792 1.0000 100 chrII:392590-398224 1.0000 100 chrXI:219670-220119 1.0000 100 chrVIII:34379-36182 1.0000 100 chrXIII:873751-874042 1.0000 100 chrVII:951336-951741 1.0000 100 chrXIII:480394-480831 1.0000 100 chrIV:568710-569282 1.0000 100 chrVIII:296971-297143 1.0000 100 chrV:249791-250557 1.0000 100 chrVII:575744-578162 1.0000 100 chrX:119853-119953 1.0000 100 chrIV:359359-359870 1.0000 100 chrXII:644462-645436 1.0000 100 chrVIII:74802-76321 1.0000 100 chrII:611901-614145 1.0000 100 chrVI:63899-65368 1.0000 100 chrVII:288732-290328 1.0000 100 chrIV:1401312-1403522 1.0000 100 chrXII:568448-571047 1.0000 100 chrIV:117186-118227 1.0000 100 chrVIII:119599-121940 1.0000 100 chrX:596895-596995 1.0000 100 chrIV:667796-668246 1.0000 100 chrX:227687-227787 1.0000 100 chrXV:87387-88630 1.0000 100 chrXI:571109-571450 1.0000 100 chrXIV:68002-68780 1.0000 100 chrIV:433543-433757 1.0000 100 chrXIV:529185-530381 1.0000 100 chrX:424098-424198 1.0000 100 chrIV:1236384-1238562 1.0000 100 chrX:390804-390904 1.0000 100 chrV:550851-551591 1.0000 100 chrXII:1002264-1003370 1.0000 100 chrXVI:822746-824296 1.0000 100 chrV:431023-431913 1.0000 100 chrVIII:125938-126298 1.0000 100 chrIV:519661-520074 1.0000 100 chrII:413827-415348 1.0000 100 chrXI:162226-162759 1.0000 100 chrXV:28382-31888 1.0000 100 chrIX:315843-318576 1.0000 100 chrXII:721772-722411 1.0000 100 chrXII:656824-657218 1.0000 100 chrVII:806049-807803 1.0000 100 chrXII:855403-857585 1.0000 100 chrIII:78413-79263 1.0000 100 chrXVI:55852-56430 1.0000 100 chrIV:43986-44543 1.0000 100 chrXIV:715439-717081 1.0000 100 chrX:542765-542865 1.0000 100 chrVIII:134113-134695 1.0000 100 chrX:378218-378318 1.0000 100 chrXIV:745753-746168 1.0000 100 chrXIII:763361-763671 1.0000 100 chrXIII:158583-160245 1.0000 100 chrXIV:442785-444765 1.0000 100 chrIV:1328864-1330994 1.0000 100 chrII:88900-89529 1.0000 100 chrV:460488-461744 1.0000 100 chrX:290016-290116 1.0000 100 chrII:36248-36883 1.0000 100 chrXIV:525072-525314 1.0000 100 chrIV:308023-310182 1.0000 100 chrII:603648-607559 1.0000 100 chrXVI:377876-378487 1.0000 100 chrXII:515284-516828 1.0000 100 chrXV:234213-234838 1.0000 100 chrXII:975820-976197 1.0000 100 chrXII:951032-953764 1.0000 100 chrXVI:302692-304247 1.0000 100 chrIV:1269876-1271049 1.0000 100 chrXV:228076-228577 1.0000 100 chrXIII:557395-558585 1.0000 100 chrXI:100302-110693 1.0000 100 chrXVI:581851-582342 1.0000 100 chrXV:988775-989406 1.0000 100 chrIX:210663-211470 1.0000 100 chrXIII:754456-755269 1.0000 100 chrVI:82204-84407 1.0000 100 chrXII:783937-784528 1.0000 100 chrIV:433922-434881 1.0000 100 chrXIII:18985-20539 1.0000 100 chrVII:401351-401616 1.0000 100 chrXV:866384-868152 1.0000 100 chrVII:452964-456003 1.0000 100 chrXV:722805-725748 1.0000 100 chrXII:374204-374762 1.0000 100 chrVI:53108-55722 1.0000 100 chrXIII:222192-223913 1.0000 100 chrVII:319226-320111 1.0000 100 chrXIII:362942-363812 1.0000 100 chrXIII:886698-889410 1.0000 100 chrXI:558574-559497 1.0000 100 chrXII:47185-49092 1.0000 100 chrV:66901-69485 1.0000 100 chrVI:220130-221535 1.0000 100 chrXV:340134-340586 1.0000 100 chrVII:115325-115762 1.0000 100 chrXVI:744067-744595 1.0000 100 chrVIII:62607-63268 1.0000 100 chrXV:444601-446583 1.0000 100 chrX:540694-540794 1.0000 100 chrXI:302681-303231 1.0000 100 chrXI:630523-630834 1.0000 100 chrXII:592346-592810 1.0000 100 chrXII:1051910-1052219 1.0000 100 chrXII:919167-924139 1.0000 100 chrIV:1449889-1451456 1.0000 100 chrXVI:718323-719657 1.0000 100 chrXVI:282032-283252 1.0000 100 chrXI:431799-433061 1.0000 100 chrXIII:67418-68058 1.0000 100 chrXV:409227-409971 1.0000 100 chrV:27604-29926 1.0000 100 chrV:441798-442637 1.0000 100 chrXV:1027847-1029274 1.0000 100 chrXIII:91408-91587 1.0000 100 chrVII:554822-557543 1.0000 100 chrIV:555421-556668 1.0000 100 chrXIII:549872-553268 1.0000 100 chrXIV:412838-413304 1.0000 100 chrXVI:585979-586296 1.0000 100 chrXI:617634-619368 1.0000 100 chrXII:805704-807163 1.0000 100 chrIX:68646-69776 1.0000 100 chrVIII:148976-149461 1.0000 100 chrXVI:39267-40610 1.0000 100 chrIII:151034-151502 1.0000 100 chrVII:531385-532018 1.0000 100 chrXIII:808017-808540 1.0000 100 chrXIII:290572-291148 1.0000 100 chrIII:127539-127901 1.0000 100 chrXIV:102578-103503 1.0000 100 chrXIV:653885-661878 1.0000 100 chrIV:129134-130958 1.0000 100 chrIV:1384575-1385115 1.0000 100 chrIII:295311-295924 1.0000 100 chrVII:436992-438461 1.0000 100 chrVIII:492013-493667 1.0000 100 chrV:53548-54046 1.0000 100 chrII:168368-169674 1.0000 100 chrXII:498485-500091 1.0000 100 chrVII:959841-961586 1.0000 100 chrVII:316747-317418 1.0000 100 chrX:662748-662848 1.0000 100 chrVII:147959-149503 1.0000 100 chrIV:465735-467411 1.0000 100 chrXII:947217-948309 1.0000 100 chrXII:731393-732324 1.0000 100 chrXV:564545-566145 1.0000 100 chrXV:407582-408283 1.0000 100 chrXIV:720371-723201 1.0000 100 chrXV:978788-979186 1.0000 100 chrIV:1354422-1355983 1.0000 100 chrIV:795759-796125 1.0000 100 chrVII:516231-518347 1.0000 100 chrIV:491445-493184 1.0000 100 chrXI:42480-47004 1.0000 100 chrIV:1162559-1164685 1.0000 100 chrX:617718-617818 1.0000 100 chrXIII:320971-321317 1.0000 100 chrX:414727-414827 1.0000 100 chrXIII:195934-196301 1.0000 100 chrVII:736168-737117 1.0000 100 chrXVI:66909-67514 1.0000 100 chrXIII:161855-162691 1.0000 100 chrXIV:505957-506772 1.0000 100 chrXIII:731812-733590 1.0000 100 chrIX:231218-233364 1.0000 100 chrIX:257390-258172 1.0000 100 chrXI:457995-459261 1.0000 100 chrXIV:215088-215910 1.0000 100 chrIV:720595-721652 1.0000 100 chrVII:667343-668184 1.0000 100 chrIV:1239360-1240669 1.0000 100 chrV:221443-222182 1.0000 100 chrXVI:188130-188916 1.0000 100 chrVIII:385142-386946 1.0000 100 chrXI:158241-159867 1.0000 100 chrIV:411311-411613 1.0000 100 chrIX:215938-216393 1.0000 100 chrIX:300078-300492 1.0000 100 chrXIV:576660-577670 1.0000 100 chrXIV:65330-66499 1.0000 100 chrIV:1251510-1252071 1.0000 100 chrX:348839-348939 1.0000 100 chrXV:448903-449346 1.0000 100 chrX:396393-396493 1.0000 100 chrV:434383-435128 1.0000 100 chrXV:796677-798883 1.0000 100 chrXII:348011-348781 1.0000 100 chrV:305827-307695 1.0000 100 chrXIII:378781-379622 1.0000 100 chrIV:409985-410792 1.0000 100 chrVII:310383-312462 1.0000 100 chrXIII:225290-225670 1.0000 100 chrV:362649-363323 1.0000 100 chrXV:281962-282521 1.0000 100 chrXVI:642009-643614 1.0000 100 chrX:531583-531683 1.0000 100 chrII:311162-313115 1.0000 100 chrXIV:234271-235736 1.0000 100 chrIV:802557-803006 1.0000 100 chrVIII:400541-402033 1.0000 100 chrVII:533615-535172 1.0000 100 chrV:487087-487584 1.0000 100 chrXV:505683-507075 1.0000 100 chrIV:946143-946643 1.0000 100 chrV:363612-364078 1.0000 100 chrX:538037-538137 1.0000 100 chrXVI:730788-731323 1.0000 100 chrIX:197366-197824 1.0000 100 chrXII:796989-797554 1.0000 100 chrVIII:237746-238131 1.0000 100 chrXV:226432-226915 1.0000 100 chrVI:191095-191850 1.0000 100 chrIV:579063-580783 1.0000 100 chrVII:648741-649354 1.0000 100 chrXVI:786086-787689 1.0000 100 chrII:255038-257818 1.0000 100 chrXIV:568059-568545 1.0000 100 chrXV:1015204-1017888 1.0000 100 chrIII:123347-123807 1.0000 100 chrX:606087-606187 1.0000 100 chrIV:1352062-1353052 1.0000 100 chrIII:81885-82659 1.0000 100 chrV:322028-323221 1.0000 100 chrII:642843-643250 1.0000 100 chrXI:93581-95169 1.0000 100 chrXIV:662927-665027 1.0000 100 chrX:156215-156315 1.0000 100 chrI:142130-143705 1.0000 100 chrXII:1028240-1028529 1.0000 100 chrXI:261060-262642 1.0000 100 chrIV:331004-333335 1.0000 100 chrXI:143219-144302 1.0000 100 chrXV:899821-901273 1.0000 100 chrVII:726903-728654 1.0000 100 chrIV:1080511-1080931 1.0000 100 chrII:326490-327072 1.0000 100 chrIV:1488976-1490720 1.0000 100 chrVII:706721-707181 1.0000 100 chrVII:779422-779922 1.0000 100 chrIX:394828-395295 1.0000 100 chrX:701770-701870 1.0000 100 chrIV:221033-222333 1.0000 100 chrXI:578714-579400 1.0000 100 chrXII:445072-447502 1.0000 100 chrVIII:410999-411693 1.0000 100 chrXIV:546441-547671 1.0000 100 chrII:165111-165443 1.0000 100 chrIX:127400-130288 1.0000 100 chrXIII:872630-873053 1.0000 100 chrXVI:559949-560496 1.0000 100 chrIII:28720-31187 1.0000 100 chrV:141084-141315 1.0000 100 chrXIII:837756-838208 1.0000 100 chrV:135240-136031 1.0000 100 chrI:138990-139368 1.0000 100 chrV:101817-102674 1.0000 100 chrXIV:413515-417324 1.0000 100 chrXVI:310204-312806 1.0000 100 chrXI:38553-39259 1.0000 100 chrXV:216298-216686 1.0000 100 chrIV:229599-230853 1.0000 100 chrVII:648007-648510 1.0000 100 chrXI:430590-431240 1.0000 100 chrXIII:759441-763166 1.0000 100 chrV:269182-270212 1.0000 100 chrXIV:229583-230973 1.0000 100 chrXII:260958-264606 1.0000 100 chrII:644976-645423 1.0000 100 chrV:51766-53299 1.0000 100 chrXVI:775614-776033 1.0000 100 chrVI:157899-158262 1.0000 100 chrXIV:771936-772353 1.0000 100 chrIV:1465727-1468473 1.0000 100 chrXIII:510912-512070 1.0000 100 chrX:181108-181208 1.0000 100 chrXIII:463324-463880 1.0000 100 chrIX:83331-84156 1.0000 100 chrV:491089-491984 1.0000 100 chrXII:329457-329936 1.0000 100 chrIV:1305448-1305891 1.0000 100 chrVII:730940-731570 1.0000 100 chrXVI:136363-136718 1.0000 100 chrIV:1201527-1202009 1.0000 100 chrXII:730935-731214 1.0000 100 chrII:59507-61263 1.0000 100 chrXIII:861152-861432 1.0000 100 chrXII:1011675-1012597 1.0000 100 chrXVI:856727-857197 1.0000 100 chrIV:437549-438159 1.0000 100 chrXV:259295-259985 1.0000 100 chrIV:757515-758179 1.0000 100 chrII:405693-406275 1.0000 100 chrXIII:507008-509180 1.0000 100 chrXVI:860174-860702 1.0000 100 chrXIV:493512-495795 1.0000 100 chrII:556240-558485 1.0000 100 chrXV:677779-681005 1.0000 100 chrXIII:789121-789807 1.0000 100 chrXIV:560171-561012 1.0000 100 chrXV:92030-94748 1.0000 100 chrXII:780521-781834 1.0000 100 chrIV:1150736-1151159 1.0000 100 chrIV:83351-83841 1.0000 100 chrIX:370226-370611 1.0000 100 chrXV:571746-572340 1.0000 100 chrI:166173-166612 1.0000 100 chrXIV:241466-241725 1.0000 100 chrVII:845440-846105 1.0000 100 chrXV:882159-882484 1.0000 100 chrXIV:331249-332503 1.0000 100 chrXII:426930-427436 1.0000 100 chrX:745066-745166 1.0000 100 chrXV:778083-779493 1.0000 100 chrV:492192-492571 1.0000 100 chrIX:45575-47162 1.0000 100 chrVII:364863-366732 1.0000 100 chrX:196223-196323 1.0000 100 chrV:422778-425473 1.0000 100 chrIV:489625-491221 1.0000 100 chrII:504538-504864 1.0000 100 chrXII:875040-876537 1.0000 100 chrIV:322156-323631 1.0000 100 chrXV:854025-854729 1.0000 100 chrV:281831-284111 1.0000 100 chrXI:333923-335033 1.0000 100 chrV:85135-87446 1.0000 100 chrXI:163288-164532 1.0000 100 chrIX:254250-254501 1.0000 100 chrVIII:144113-146468 1.0000 100 chrXV:113590-113881 1.0000 100 chrIX:174870-175397 1.0000 100 chrXII:809280-809601 1.0000 100 chrVII:738900-739580 1.0000 100 chrVII:227296-228398 1.0000 100 chrXI:84008-84453 1.0000 100 chrXII:930316-931880 1.0000 100 chrXIV:575103-576203 1.0000 100 chrXVI:432490-434298 1.0000 100 chrX:73402-73502 1.0000 100 chrXII:368681-372800 1.0000 100 chrXIII:420313-420864 1.0000 100 chrIV:125322-126110 1.0000 100 chrIV:1075281-1075759 1.0000 100 chrVIII:388661-389003 1.0000 100 chrIV:1301553-1302561 1.0000 100 chrXV:252801-253700 1.0000 100 chrIV:118416-118923 1.0000 100 chrXVI:378682-378998 1.0000 100 chrV:438519-438968 1.0000 100 chrXVI:519991-520472 1.0000 100 chrXI:513033-513602 1.0000 100 chrV:138457-140890 1.0000 100 chrXIII:372171-372662 1.0000 100 chrIX:99663-100110 1.0000 100 chrXII:282755-283996 1.0000 100 chrIV:600617-602370 1.0000 100 chrX:68729-68829 1.0000 100 chrV:288155-288741 1.0000 100 chrIV:305991-307847 1.0000 100 chrXIV:783920-784318 1.0000 100 chrVII:1004037-1004436 1.0000 100 chrXIII:661701-662038 1.0000 100 chrVIII:562389-562583 1.0000 100 chrVIII:85101-85360 1.0000 100 chrXVI:172906-174135 1.0000 100 chrXII:402326-403814 1.0000 100 chrXV:976383-976850 1.0000 100 chrXV:977131-978366 1.0000 100 chrXII:253131-253400 1.0000 100 chrVII:649595-650731 1.0000 100 chrXIII:146429-147612 1.0000 100 chrXV:896382-898392 1.0000 100 chrX:139066-139166 1.0000 100 chrXV:841528-842908 1.0000 100 chrIII:57317-60851 1.0000 100 chrVII:828342-828972 1.0000 100 chrIV:722423-722856 1.0000 100 chrIII:129-590 1.0000 100 chrX:157500-157600 1.0000 100 chrIV:465200-465564 1.0000 100 chrXII:459628-460728 1.0000 100 chrX:339016-339116 1.0000 100 chrXIII:768186-768431 1.0000 100 chrIX:255024-257143 1.0000 100 chrV:176920-177470 1.0000 100 chrV:99876-100337 1.0000 100 chrXV:159157-160739 1.0000 100 chrIV:1400912-1401109 1.0000 100 chrVII:794202-794773 1.0000 100 chrV:386112-386791 1.0000 100 chrV:311719-312298 1.0000 100 chrVIII:505860-506170 1.0000 100 chrVII:938997-940175 1.0000 100 chrVII:328369-329243 1.0000 100 chrX:651850-651950 1.0000 100 chrXII:36958-37635 1.0000 100 chrXII:167783-168231 1.0000 100 chrXI:313035-314012 1.0000 100 chrXV:967963-968379 1.0000 100 chrVI:180678-181233 1.0000 100 chrIV:841962-842684 1.0000 100 chrXII:793779-796825 1.0000 100 chrIV:354988-357050 1.0000 100 chrXII:789429-790047 1.0000 100 chrI:68194-68715 1.0000 100 chrXII:687668-687908 1.0000 100 chrXVI:770696-771176 1.0000 100 chrX:172670-172770 1.0000 100 chrIV:927767-930396 1.0000 100 chrXII:201602-202725 1.0000 100 chrXV:353905-354305 1.0000 100 chrII:478936-479438 1.0000 100 chrVII:197960-199547 1.0000 100 chrIII:177062-178826 1.0000 100 chrIV:472662-473386 1.0000 100 chrI:181132-181452 1.0000 100 chrVIII:80186-81651 1.0000 100 chrXIV:302595-303812 1.0000 100 chrXV:304574-307677 1.0000 100 chrXV:253865-255067 1.0000 100 chrIV:992726-993347 1.0000 100 chrVII:610450-611551 1.0000 100 chrXIII:572632-573143 1.0000 100 chrXV:438452-439415 1.0000 100 chrXIII:499000-500816 1.0000 100 chrIV:1243122-1243334 1.0000 100 chrII:167487-168203 1.0000 100 chrVI:101162-102044 1.0000 100 chrVII:400333-400833 1.0000 100 chrVII:774140-774750 1.0000 100 chrXIII:30187-30690 1.0000 100 chrV:406533-409337 1.0000 100 chrII:44957-45342 1.0000 100 chrXIV:351587-352939 1.0000 100 chrX:650714-650814 1.0000 100 chrXIV:253208-254165 1.0000 100 chrXII:837634-839438 1.0000 100 chrXI:325910-327649 1.0000 100 chrXV:487437-487763 1.0000 100 chrX:422682-422782 1.0000 100 chrXVI:498018-499324 1.0000 100 chrXII:514052-514907 1.0000 100 chrVII:661541-661945 1.0000 100 chrXV:274449-275007 1.0000 100 chrXIII:50719-51408 1.0000 100 chrIV:525402-527329 1.0000 100 chrXIII:287988-289997 1.0000 100 chrVII:726415-726737 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MCM1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MCM1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MCM1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.303 C 0.197 G 0.197 T 0.303 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--MCM1/background): A 0.308 C 0.192 G 0.192 T 0.308 ******************************************************************************** ******************************************************************************** MOTIF AGGTCCBSGGTTCGATYCCSVGHBDGRGC MEME-1 width = 29 sites = 69 llr = 1379 E-value = 2.4e-277 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGGTCCBSGGTTCGATYCCSVGHBDGRGC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 6222:2::2::::3a1::1:2:2121313 pos.-specific C 12:18733::::a::24a76414222226 probability G 268::1467a:::7:1:::447:44645: matrix T :1:62:311:aa:::66:2::23221111 bits 2.4 * * * 2.1 * * * 1.9 * * * 1.7 * ** * * Relative 1.4 * * ****** * Entropy 1.2 * * ****** * * (28.8 bits) 1.0 * ** ******** **** * 0.7 ** ** ******** ****** * * 0.5 *************** ******* **** 0.2 ***************************** 0.0 ----------------------------- Multilevel AGGTCCGGGGTTCGATTCCCCGCGGGGGC consensus G AATACCA A C TGGTTTTCACA sequence T A ACA C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCCBSGGTTCGATYCCSVGHBDGRGC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrIII:123347-123807 - 51 1.97e-14 AGGGTGCGGG AGGTCCCGGGTTCGAGTCCCGGCTCGCCC CACATTGTTT chrVI:180678-181233 - 70 1.27e-13 TT GGGCCCCCGGTTCGATTCCGGGCTTGCGC AGTCCTTTTT chrIV:83351-83841 + 43 1.27e-13 TGCCATCGTT GGGCCCCCGGTTCGATTCCGGGCTTGCGC AAGTTTAATT chrXVI:860174-860702 + 32 1.27e-13 TGCCATCGTT GGGCCCCCGGTTCGATTCCGGGCTTGCGC AGATTTTATT chrX:531583-531683 + 4 1.27e-13 GTT GGGCCCCCGGTTCGATTCCGGGCTTGCGC AGTTTCTTTT chrXV:281962-282521 + 14 1.27e-13 TGCCATCGTT GGGCCCCCGGTTCGATTCCGGGCTTGCGC ATTTCTTTTT chrIV:1075281-1075759 - 3 3.08e-12 CACACGGCAA AGGTCCCGAGTTCGATCCTCGGTTGGAAC AT chrXIII:195934-196301 - 2 5.44e-12 AGCATGCGAG AGGCCCTGGGTTCAATTCCCAGCTCGCCC C chrXV:464293-464781 + 35 5.44e-12 AGCATGCGAG AGGCCCTGGGTTCAATTCCCAGCTCGCCC CTTTTATTTT chrXII:92310-92970 + 31 5.44e-12 AGCATGCGAG AGGCCCTGGGTTCAATTCCCAGCTCGCCC CTTTATTTTC chrX:414727-414827 + 37 1.08e-11 CTTAATCATA AGGTTAGGGGTTCGAGCCCCCTACAGGGC TAATATTTTT chrIII:151034-151502 - 67 1.08e-11 TCATA AGGTTAGGGGTTCGAGCCCCCTACAGGGC TTTCTTTTTT chrXVI:581851-582342 + 59 1.08e-11 CTTAATCATA AGGTTAGGGGTTCGAGCCCCCTACAGGGC TTTCTTTTTT chrXIII:480394-480831 - 60 1.08e-11 CTTAATCATA AGGTTAGGGGTTCGAGCCCCCTACAGGGC TTCTTTTTTT chrII:644976-645423 + 60 5.60e-11 TTTCACCGTG GAGACCGGGGTTCGACTCCCCGTATCGGA GTTATTTTTT chrV:487087-487584 - 47 5.60e-11 TTTCACCGTG GAGACCGGGGTTCGACTCCCCGTATCGGA GTATTCGTTA chrXIII:290572-291148 + 33 5.60e-11 TTTCACCGTG GAGACCGGGGTTCGACTCCCCGTATCGGA GTCTTCTTTT chrXVI:209944-210497 - 23 5.60e-11 TTTCACCGTG GAGACCGGGGTTCGACTCCCCGTATCGGA GTTTTCTTTT chrV:354677-355361 + 7 5.60e-11 ACCGTG GAGACCGGGGTTCGACTCCCCGTATCGGA GTACTTTTTT chrV:311719-312298 - 66 6.31e-11 AGGAAG AGGTCATCGGTTCGATTCCGGTTGCGTCC AATGAAATCT chrVII:794202-794773 + 23 6.31e-11 TGCAAGGAAG AGGTCATCGGTTCGATTCCGGTTGCGTCC ATATTTTTGA chrXII:1051910-1052219 - 58 8.00e-11 AATAACGCGG GGATCAGCGGTTCGATCCCGCTAGAGACC ATTATTTTTT chrIV:667796-668246 - 37 8.00e-11 AATAACGCGG GGATCAGCGGTTCGATCCCGCTAGAGACC ATTTTTATTT chrXVI:880023-880580 - 46 8.00e-11 AATAACGCGG GGATCAGCGGTTCGATCCCGCTAGAGACC ATTTCTTTTC chrXIII:808017-808540 - 19 8.99e-11 TCTGATCCGA ACAACCCCAGTTCGAATCCGGGTGGGACC TTCCCTTCAT chrII:326490-327072 - 62 1.01e-10 TACACGGCGA AGATCCCGAGTTCGAACCTCGGTTGGATC AAACTCTTTA chrIV:802557-803006 - 1 1.01e-10 TTTGATCCGG ACAACCCCGGTTCGAATCCGGGTAGGACC chrVIII:134113-134695 + 9 1.01e-10 TGATCCGG ACAACCCCGGTTCGAATCCGGGTAGGACC TTTTTTTGCT chrXI:513033-513602 - 66 1.13e-10 GCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA GATTTTTTAT chrXII:426930-427436 + 41 1.13e-10 TGTCGCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA GAATTTTTTT chrXV:571746-572340 + 7 1.13e-10 GCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA GATTTTTTTG chrII:405693-406275 + 68 1.13e-10 TGTCGCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA GATT chrXIII:463324-463880 + 44 1.13e-10 TGTCGCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA GATTTTTTTA chrVII:531385-532018 + 1 1.13e-10 . CAGATCGGGGTTCAATTCCCCGTCGCGGA GATATTTTTT chrX:540694-540794 + 27 1.13e-10 TGTCGCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA GATTTTTTTG chrIV:568710-569282 + 60 1.13e-10 TGTCGCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA GAATTTTTTT chrV:438519-438968 + 51 1.59e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC AATTTTTTTT chrXIII:420313-420864 - 51 1.59e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC ATTTTTATCT chrX:378218-378318 + 54 1.59e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC AATTTTTTGT chrXIII:586372-586910 - 46 1.59e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC ATTTTTTTGA chrXI:307893-308434 - 32 1.59e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC AATTTTTTTT chrVII:823339-823729 + 42 1.59e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC ATTTTTTGAA chrVII:412062-412595 - 17 1.59e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC AAGTTTTATT chrVII:779422-779922 + 36 3.39e-10 TTCCAAGGTG GGGACACGGGTTCGATTCTCGTACCGCTC AAGATTACTT chrXI:578714-579400 + 24 7.68e-10 GGATACCGAA ATGTCAGGGGTTCGAGCCCCCTATGAGGA GTTCTTTACT chrVII:115325-115762 + 61 7.68e-10 GGATACCGAA ATGTCAGGGGTTCGAGCCCCCTATGAGGA GTTCTTTTTT chrXIV:374693-375136 + 66 1.03e-09 AGTCATCTGG AGGTCCTGTGTTCGATCCACAGAGTTCGC AATTTG chrIV:1095076-1095670 - 48 1.03e-09 AGATATCTGG AGGTCCTGTGTTCGATCCACAGAGTTCGC ATTTTTATTT chrII:642843-643250 - 12 1.51e-09 GCAAATCTGT TGGTCCTTAGTTCGATCCTGAGTGCGAGC TTCTTTTTTT chrXVI:435653-436195 - 20 1.51e-09 GCAAATCTGT TGGTCCTTAGTTCGATCCTGAGTGCGAGC TTTCTTTTTT chrXVI:856727-857197 + 33 1.66e-09 AGCATGGGAG AGGTCTCCGGTTCGATTCCGGACTCGTCC ATTTTAATTT chrXIII:320971-321317 - 54 1.66e-09 AGCATGGGAG AGGTCTCCGGTTCGATTCCGGACTCGTCC ATTTTTTATT chrIV:884252-884677 + 50 1.82e-09 AGCAACGCGA CCGTCGTGGGTTCAAACCCCACCTCGAGC ACTTTCTCTT chrXIII:572632-573143 - 47 2.18e-09 CATAATCTGA AGGTCGAGAGTTCGAACCTCCCCTGGAGC ACATTTTTTT chrXI:162226-162759 - 46 2.61e-09 TCTAATCAGA AGATTATGGGTTCGACCCCCATCGTGAGT GTTTTTTACA chrXIII:131623-132109 - 10 2.61e-09 TCTAATCAGA AGATTATGGGTTCGACCCCCATCGTGAGT GCTTTGTTT chrXVI:559949-560496 - 27 4.05e-09 AGTTATCTGG AGGTCCTGTGTTCGATCCACAGAATTCGC ATTTCTATTT chrVIII:358283-358762 - 7 4.05e-09 AGTTATCTGG AGGTCCTGTGTTCGATCCACAGAATTCGC ATATTT chrXII:975820-976197 - 26 5.23e-09 GTTAATCGCA AGATCGTGAGTTCAACCCTCACTGGGGTC GTTTATTTTT chrV:492192-492571 - 22 7.28e-09 ACGAACCAGA AGATTCCAGGTTCAAGTCCTGGCGGGGAA GGATTATTTT chrIV:619734-620188 - 59 7.28e-09 ACGAACCAGA AGATTCCAGGTTCAAGTCCTGGCGGGGAA GATTTTTTAT chrXI:490773-491267 + 41 7.28e-09 ACGAACCAGA AGATTCCAGGTTCAAGTCCTGGCGGGGAA GAATTTTTTT chrVII:1004037-1004436 + 72 1.99e-08 TGTAATGCAA AGGTCGTTAGTTCAATTCTGACAGGTGGC chrXVI:744067-744595 + 45 1.99e-08 TGTAATGCAA AGGTCGTTAGTTCAATTCTGACAGGTGGC AAAATTTTTT chrXIII:837756-838208 + 55 3.06e-08 CGAAATCTTG AGATCGGGCGTTCGACTCGCCCCCGGGAG ATATTTTTTT chrIV:946143-946643 + 28 3.06e-08 CGAAATCTTG AGATCGGGCGTTCGACTCGCCCCCGGGAG ATTTTTTTAT chrVI:167251-167729 + 56 3.06e-08 CGAAATCTTG AGATCGGGCGTTCGACTCGCCCCCGGGAG ATATTTTTTT chrX:517648-517748 - 4 6.82e-08 CATAACCCTG ATGTCCTCGGATCGAAACCGAGCGGCGCT AAG chrIII:149715-150190 + 60 6.82e-08 CATAACCCTG ATGTCCTCGGATCGAAACCGAGCGGCGCT ATTAAATTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCCBSGGTTCGATYCCSVGHBDGRGC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123347-123807 2e-14 50_[-1]_21 chrVI:180678-181233 1.3e-13 69_[-1]_2 chrIV:83351-83841 1.3e-13 42_[+1]_29 chrXVI:860174-860702 1.3e-13 31_[+1]_40 chrX:531583-531683 1.3e-13 3_[+1]_68 chrXV:281962-282521 1.3e-13 13_[+1]_58 chrIV:1075281-1075759 3.1e-12 2_[-1]_69 chrXIII:195934-196301 5.4e-12 1_[-1]_70 chrXV:464293-464781 5.4e-12 34_[+1]_37 chrXII:92310-92970 5.4e-12 30_[+1]_41 chrX:414727-414827 1.1e-11 36_[+1]_35 chrIII:151034-151502 1.1e-11 66_[-1]_5 chrXVI:581851-582342 1.1e-11 58_[+1]_13 chrXIII:480394-480831 1.1e-11 59_[-1]_12 chrII:644976-645423 5.6e-11 59_[+1]_12 chrV:487087-487584 5.6e-11 46_[-1]_25 chrXIII:290572-291148 5.6e-11 32_[+1]_39 chrXVI:209944-210497 5.6e-11 22_[-1]_49 chrV:354677-355361 5.6e-11 6_[+1]_65 chrV:311719-312298 6.3e-11 65_[-1]_6 chrVII:794202-794773 6.3e-11 22_[+1]_49 chrXII:1051910-1052219 8e-11 57_[-1]_14 chrIV:667796-668246 8e-11 36_[-1]_35 chrXVI:880023-880580 8e-11 45_[-1]_26 chrXIII:808017-808540 9e-11 18_[-1]_53 chrII:326490-327072 1e-10 61_[-1]_10 chrIV:802557-803006 1e-10 [-1]_71 chrVIII:134113-134695 1e-10 8_[+1]_63 chrXI:513033-513602 1.1e-10 65_[-1]_6 chrXII:426930-427436 1.1e-10 40_[+1]_31 chrXV:571746-572340 1.1e-10 6_[+1]_65 chrII:405693-406275 1.1e-10 67_[+1]_4 chrXIII:463324-463880 1.1e-10 43_[+1]_28 chrVII:531385-532018 1.1e-10 [+1]_71 chrX:540694-540794 1.1e-10 26_[+1]_45 chrIV:568710-569282 1.1e-10 59_[+1]_12 chrV:438519-438968 1.6e-10 50_[+1]_21 chrXIII:420313-420864 1.6e-10 50_[-1]_21 chrX:378218-378318 1.6e-10 53_[+1]_18 chrXIII:586372-586910 1.6e-10 45_[-1]_26 chrXI:307893-308434 1.6e-10 31_[-1]_40 chrVII:823339-823729 1.6e-10 41_[+1]_30 chrVII:412062-412595 1.6e-10 16_[-1]_55 chrVII:779422-779922 3.4e-10 35_[+1]_36 chrXI:578714-579400 7.7e-10 23_[+1]_48 chrVII:115325-115762 7.7e-10 60_[+1]_11 chrXIV:374693-375136 1e-09 65_[+1]_6 chrIV:1095076-1095670 1e-09 47_[-1]_24 chrII:642843-643250 1.5e-09 11_[-1]_60 chrXVI:435653-436195 1.5e-09 19_[-1]_52 chrXVI:856727-857197 1.7e-09 32_[+1]_39 chrXIII:320971-321317 1.7e-09 53_[-1]_18 chrIV:884252-884677 1.8e-09 49_[+1]_22 chrXIII:572632-573143 2.2e-09 46_[-1]_25 chrXI:162226-162759 2.6e-09 45_[-1]_26 chrXIII:131623-132109 2.6e-09 9_[-1]_62 chrXVI:559949-560496 4.1e-09 26_[-1]_45 chrVIII:358283-358762 4.1e-09 6_[-1]_65 chrXII:975820-976197 5.2e-09 25_[-1]_46 chrV:492192-492571 7.3e-09 21_[-1]_50 chrIV:619734-620188 7.3e-09 58_[-1]_13 chrXI:490773-491267 7.3e-09 40_[+1]_31 chrVII:1004037-1004436 2e-08 71_[+1] chrXVI:744067-744595 2e-08 44_[+1]_27 chrXIII:837756-838208 3.1e-08 54_[+1]_17 chrIV:946143-946643 3.1e-08 27_[+1]_44 chrVI:167251-167729 3.1e-08 55_[+1]_16 chrX:517648-517748 6.8e-08 3_[-1]_68 chrIII:149715-150190 6.8e-08 59_[+1]_12 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCCBSGGTTCGATYCCSVGHBDGRGC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGGTCCBSGGTTCGATYCCSVGHBDGRGC width=29 seqs=69 chrIII:123347-123807 ( 51) AGGTCCCGGGTTCGAGTCCCGGCTCGCCC 1 chrVI:180678-181233 ( 70) GGGCCCCCGGTTCGATTCCGGGCTTGCGC 1 chrIV:83351-83841 ( 43) GGGCCCCCGGTTCGATTCCGGGCTTGCGC 1 chrXVI:860174-860702 ( 32) GGGCCCCCGGTTCGATTCCGGGCTTGCGC 1 chrX:531583-531683 ( 4) GGGCCCCCGGTTCGATTCCGGGCTTGCGC 1 chrXV:281962-282521 ( 14) GGGCCCCCGGTTCGATTCCGGGCTTGCGC 1 chrIV:1075281-1075759 ( 3) AGGTCCCGAGTTCGATCCTCGGTTGGAAC 1 chrXIII:195934-196301 ( 2) AGGCCCTGGGTTCAATTCCCAGCTCGCCC 1 chrXV:464293-464781 ( 35) AGGCCCTGGGTTCAATTCCCAGCTCGCCC 1 chrXII:92310-92970 ( 31) AGGCCCTGGGTTCAATTCCCAGCTCGCCC 1 chrX:414727-414827 ( 37) AGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrIII:151034-151502 ( 67) AGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrXVI:581851-582342 ( 59) AGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrXIII:480394-480831 ( 60) AGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrII:644976-645423 ( 60) GAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrV:487087-487584 ( 47) GAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrXIII:290572-291148 ( 33) GAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrXVI:209944-210497 ( 23) GAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrV:354677-355361 ( 7) GAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrV:311719-312298 ( 66) AGGTCATCGGTTCGATTCCGGTTGCGTCC 1 chrVII:794202-794773 ( 23) AGGTCATCGGTTCGATTCCGGTTGCGTCC 1 chrXII:1051910-1052219 ( 58) GGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrIV:667796-668246 ( 37) GGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrXVI:880023-880580 ( 46) GGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrXIII:808017-808540 ( 19) ACAACCCCAGTTCGAATCCGGGTGGGACC 1 chrII:326490-327072 ( 62) AGATCCCGAGTTCGAACCTCGGTTGGATC 1 chrIV:802557-803006 ( 1) ACAACCCCGGTTCGAATCCGGGTAGGACC 1 chrVIII:134113-134695 ( 9) ACAACCCCGGTTCGAATCCGGGTAGGACC 1 chrXI:513033-513602 ( 66) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrXII:426930-427436 ( 41) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrXV:571746-572340 ( 7) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrII:405693-406275 ( 68) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrXIII:463324-463880 ( 44) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrVII:531385-532018 ( 1) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrX:540694-540794 ( 27) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrIV:568710-569282 ( 60) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrV:438519-438968 ( 51) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrXIII:420313-420864 ( 51) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrX:378218-378318 ( 54) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrXIII:586372-586910 ( 46) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrXI:307893-308434 ( 32) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrVII:823339-823729 ( 42) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrVII:412062-412595 ( 17) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrVII:779422-779922 ( 36) GGGACACGGGTTCGATTCTCGTACCGCTC 1 chrXI:578714-579400 ( 24) ATGTCAGGGGTTCGAGCCCCCTATGAGGA 1 chrVII:115325-115762 ( 61) ATGTCAGGGGTTCGAGCCCCCTATGAGGA 1 chrXIV:374693-375136 ( 66) AGGTCCTGTGTTCGATCCACAGAGTTCGC 1 chrIV:1095076-1095670 ( 48) AGGTCCTGTGTTCGATCCACAGAGTTCGC 1 chrII:642843-643250 ( 12) TGGTCCTTAGTTCGATCCTGAGTGCGAGC 1 chrXVI:435653-436195 ( 20) TGGTCCTTAGTTCGATCCTGAGTGCGAGC 1 chrXVI:856727-857197 ( 33) AGGTCTCCGGTTCGATTCCGGACTCGTCC 1 chrXIII:320971-321317 ( 54) AGGTCTCCGGTTCGATTCCGGACTCGTCC 1 chrIV:884252-884677 ( 50) CCGTCGTGGGTTCAAACCCCACCTCGAGC 1 chrXIII:572632-573143 ( 47) AGGTCGAGAGTTCGAACCTCCCCTGGAGC 1 chrXI:162226-162759 ( 46) AGATTATGGGTTCGACCCCCATCGTGAGT 1 chrXIII:131623-132109 ( 10) AGATTATGGGTTCGACCCCCATCGTGAGT 1 chrXVI:559949-560496 ( 27) AGGTCCTGTGTTCGATCCACAGAATTCGC 1 chrVIII:358283-358762 ( 7) AGGTCCTGTGTTCGATCCACAGAATTCGC 1 chrXII:975820-976197 ( 26) AGATCGTGAGTTCAACCCTCACTGGGGTC 1 chrV:492192-492571 ( 22) AGATTCCAGGTTCAAGTCCTGGCGGGGAA 1 chrIV:619734-620188 ( 59) AGATTCCAGGTTCAAGTCCTGGCGGGGAA 1 chrXI:490773-491267 ( 41) AGATTCCAGGTTCAAGTCCTGGCGGGGAA 1 chrVII:1004037-1004436 ( 72) AGGTCGTTAGTTCAATTCTGACAGGTGGC 1 chrXVI:744067-744595 ( 45) AGGTCGTTAGTTCAATTCTGACAGGTGGC 1 chrXIII:837756-838208 ( 55) AGATCGGGCGTTCGACTCGCCCCCGGGAG 1 chrIV:946143-946643 ( 28) AGATCGGGCGTTCGACTCGCCCCCGGGAG 1 chrVI:167251-167729 ( 56) AGATCGGGCGTTCGACTCGCCCCCGGGAG 1 chrX:517648-517748 ( 4) ATGTCCTCGGATCGAAACCGAGCGGCGCT 1 chrIII:149715-150190 ( 60) ATGTCCTCGGATCGAAACCGAGCGGCGCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCCBSGGTTCGATYCCSVGHBDGRGC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43200 bayes= 11.0618 E= 2.4e-277 105 -56 8 -341 -71 -27 163 -241 -41 -1275 200 -1275 -32 -73 -1275 105 -1275 197 -1275 -32 -60 177 -73 -341 -441 86 92 -16 -282 86 152 -241 -41 -214 180 -241 -1275 -1275 238 -1275 -341 -1275 -1275 166 -1275 -1275 -1275 170 -1275 238 -1275 -1275 -24 -1275 195 -1275 170 -1275 -1275 -1275 -141 -27 -40 91 -341 113 -1275 84 -1275 238 -1275 -1275 -241 180 -214 -41 -1275 152 108 -282 -32 97 97 -1275 -341 -73 177 -60 -41 118 -1275 11 -124 27 103 -32 -60 -14 103 -41 -124 18 156 -183 -2 8 118 -241 -160 27 144 -109 -24 173 -214 -241 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCCBSGGTTCGATYCCSVGHBDGRGC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 69 E= 2.4e-277 0.637681 0.130435 0.202899 0.028986 0.188406 0.159420 0.594203 0.057971 0.231884 0.000000 0.768116 0.000000 0.246377 0.115942 0.000000 0.637681 0.000000 0.753623 0.000000 0.246377 0.202899 0.652174 0.115942 0.028986 0.014493 0.347826 0.362319 0.275362 0.043478 0.347826 0.550725 0.057971 0.231884 0.043478 0.666667 0.057971 0.000000 0.000000 1.000000 0.000000 0.028986 0.000000 0.000000 0.971014 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.260870 0.000000 0.739130 0.000000 1.000000 0.000000 0.000000 0.000000 0.115942 0.159420 0.144928 0.579710 0.028986 0.420290 0.000000 0.550725 0.000000 1.000000 0.000000 0.000000 0.057971 0.666667 0.043478 0.231884 0.000000 0.550725 0.405797 0.043478 0.246377 0.376812 0.376812 0.000000 0.028986 0.115942 0.652174 0.202899 0.231884 0.434783 0.000000 0.333333 0.130435 0.231884 0.391304 0.246377 0.202899 0.173913 0.391304 0.231884 0.130435 0.217391 0.565217 0.086957 0.304348 0.202899 0.434783 0.057971 0.101449 0.231884 0.521739 0.144928 0.260870 0.637681 0.043478 0.057971 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCCBSGGTTCGATYCCSVGHBDGRGC MEME-1 regular expression -------------------------------------------------------------------------------- [AG]G[GA][TA][CT][CA][GCT][GC][GA]GTTC[GA]AT[TC]C[CT][CG][CGA][GT][CTA][GTC][GTA][GC][GAC][GC][CA] -------------------------------------------------------------------------------- Time 352.41 secs. ******************************************************************************** ******************************************************************************** MOTIF KTGGCYYAGTKGKWWRRGSS MEME-2 width = 20 sites = 54 llr = 783 E-value = 5.9e-092 ******************************************************************************** -------------------------------------------------------------------------------- Motif KTGGCYYAGTKGKWWRRGSS MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1:3:::1a2::::355411: pos.-specific C ::::854:::2::1:21244 probability G 5:7a:21:8:5a51234645 matrix T 4a::233::a3:45411111 bits 2.4 * * 2.1 * * 1.9 * * 1.7 * ** *** * Relative 1.4 **** *** * Entropy 1.2 **** *** * (20.9 bits) 1.0 **** *** * * * 0.7 ****** *** ** *** 0.5 ****** ****** *** 0.2 ******************** 0.0 -------------------- Multilevel GTGGCCCAGTGGGTAAAGCG consensus T A TT T TATGGCGC sequence G C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYYAGTKGKWWRRGSS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrXV:274449-275007 + 1 6.52e-11 . GTGGCCGAGTGGTTAAGGCG ATGCCCTGCT chrIV:1150736-1151159 - 19 6.52e-11 TTCAGTCCCA GTGGCCGAGTGGTTAAGGCG ATGCCTGCTA chrXII:167783-168231 - 43 4.86e-10 ATATGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIV:1305448-1305891 + 17 4.86e-10 TTAAGGCAAC TTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXIV:602085-602575 + 38 1.02e-09 CAATGGTCTC TTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrIV:409985-410792 + 47 1.70e-09 TATTGGGCGT GTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXII:656824-657218 - 10 1.70e-09 AATTGGGCGT GTGGCGTAGTCGGTAGCGCG CTCCCTTAG chrXI:219670-220119 + 57 1.70e-09 AATAGGGCGT GTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrX:617718-617818 + 19 2.75e-09 CAATGGGAGT TTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrXII:592346-592810 - 66 2.75e-09 CAATGGGAGT TTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrV:492192-492571 - 68 7.84e-09 CCTATTCCTC GTGGCCCAATGGTCACGGCG TCTGGCTACG chrXV:340134-340586 - 36 7.84e-09 TCTGTTCCTC GTGGCCCAATGGTCACGGCG TCTGGCTACG chrXI:490773-491267 + 4 7.84e-09 CTC GTGGCCCAATGGTCACGGCG TCTGGCTACG chrXV:353905-354305 - 33 9.02e-09 TACTGCTTCT ATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXI:84008-84453 + 34 1.54e-08 GTATGGAGGG TTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrXII:962815-963316 - 15 1.54e-08 CGACGGAGGG TTGGCCGAGTGGTCTAAGGC GGCAGACTTA chrVII:115325-115762 + 1 1.76e-08 . TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:359359-359870 + 19 1.76e-08 CTCATCCTTG TTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrIV:1201527-1202009 + 38 2.89e-08 AATAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrIV:1352062-1353052 - 6 2.89e-08 AATAGCCTTG TTGGCGCAATCGGTAGCGCG TATGA chrIX:300078-300492 - 40 2.89e-08 AATAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrXVI:581851-582342 + 22 2.89e-08 AAGAGCCTTG TTGGCGCAATCGGTAGCGCG TATGACTCTT chrIII:127539-127901 + 52 3.25e-08 AAATGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:228076-228577 + 61 3.25e-08 ATTAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXII:975820-976197 - 73 3.25e-08 AAGACTCC ATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrV:438519-438968 + 13 7.18e-08 ATTAGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrX:378218-378318 + 16 7.18e-08 AATAGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXI:307893-308434 - 79 7.18e-08 TC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:823339-823729 + 4 7.18e-08 TTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrVII:412062-412595 - 64 7.18e-08 AACTGGTTTC GTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrX:422682-422782 + 61 9.85e-08 GTATGCTTCA GTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:390804-390904 - 42 9.85e-08 TAGTGCTTCA GTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrVIII:237746-238131 - 26 1.20e-07 GTAAGCGGAT TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIV:374693-375136 + 11 1.20e-07 ATAAGCGGAC TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrVIII:358283-358762 - 72 1.20e-07 TAAGCGGAT TTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrX:517648-517748 - 49 1.33e-07 GTTAAGCGCC GTGGCGCAGTGGAAGCGCGC AGGGCTCATA chrIII:149715-150190 + 24 1.33e-07 GTTGAGCGCC GTGGCGCAGTGGAAGCGCGC AGGGCTCATA chrXVI:775614-776033 - 38 5.55e-07 AAAAGCTCGT ATGGCGCAGTGGTAGCGCAG CAGATTGCAA chrII:642843-643250 - 57 5.55e-07 GAAAGCTCGT ATGGCGCAGTGGTAGCGCAG CAGATTGCAA chrXVI:435653-436195 - 65 5.55e-07 AAAAGCTCGT ATGGCGCAGTGGTAGCGCAG CAGATTGCAA chrIV:83351-83841 + 8 6.00e-07 AGCGCAA GTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:226432-226915 - 33 6.00e-07 TTCAGCGCAA GTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVII:661541-661945 + 62 9.46e-07 ATTTGCCTCC TTAGCTTAGTGGTAGAGCGT TGCACTTGTA chrVII:1004037-1004436 + 36 9.46e-07 GTTTGCCTCC TTAGCTTAGTGGTAGAGCGT TGCACTTGTA chrXIII:837756-838208 + 2 9.46e-07 G GTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXVI:744067-744595 + 9 9.46e-07 AAGCCTCC TTAGCTTAGTGGTAGAGCGT TGCACTTGTA chrX:542765-542865 - 56 9.46e-07 AATACTCTCG GTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrVI:167251-167729 + 3 9.46e-07 CG GTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXIII:168227-169382 + 47 9.46e-07 GTCACTCTCG GTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrI:138990-139368 + 29 1.64e-06 GTACGGGCGT GTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXIII:195934-196301 - 78 1.64e-06 CGT GTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXI:302681-303231 + 18 1.75e-06 AGATGAAGCG GTGGCTCAATGGTAGAGCTT TCGACTCCAA chrVII:287149-287779 - 16 1.75e-06 AGATGAAGCG GTGGCTCAATGGTAGAGCTT TCGACTCCAA chrXIII:131623-132109 - 55 3.02e-06 TTTAGCTCGC GTGGCGTAATGGCAACGCGT CTGACTTCTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYYAGTKGKWWRRGSS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:274449-275007 6.5e-11 [+2]_80 chrIV:1150736-1151159 6.5e-11 18_[-2]_62 chrXII:167783-168231 4.9e-10 42_[-2]_38 chrIV:1305448-1305891 4.9e-10 16_[+2]_64 chrXIV:602085-602575 1e-09 37_[+2]_43 chrIV:409985-410792 1.7e-09 46_[+2]_34 chrXII:656824-657218 1.7e-09 9_[-2]_71 chrXI:219670-220119 1.7e-09 56_[+2]_24 chrX:617718-617818 2.8e-09 18_[+2]_62 chrXII:592346-592810 2.8e-09 65_[-2]_15 chrV:492192-492571 7.8e-09 67_[-2]_13 chrXV:340134-340586 7.8e-09 35_[-2]_45 chrXI:490773-491267 7.8e-09 3_[+2]_77 chrXV:353905-354305 9e-09 32_[-2]_48 chrXI:84008-84453 1.5e-08 33_[+2]_47 chrXII:962815-963316 1.5e-08 14_[-2]_66 chrVII:115325-115762 1.8e-08 [+2]_80 chrIV:359359-359870 1.8e-08 18_[+2]_62 chrIV:1201527-1202009 2.9e-08 37_[+2]_43 chrIV:1352062-1353052 2.9e-08 5_[-2]_75 chrIX:300078-300492 2.9e-08 39_[-2]_41 chrXVI:581851-582342 2.9e-08 21_[+2]_59 chrIII:127539-127901 3.3e-08 51_[+2]_29 chrXV:228076-228577 3.3e-08 60_[+2]_20 chrXII:975820-976197 3.3e-08 72_[-2]_8 chrV:438519-438968 7.2e-08 12_[+2]_68 chrX:378218-378318 7.2e-08 15_[+2]_65 chrXI:307893-308434 7.2e-08 78_[-2]_2 chrVII:823339-823729 7.2e-08 3_[+2]_77 chrVII:412062-412595 7.2e-08 63_[-2]_17 chrX:422682-422782 9.9e-08 60_[+2]_20 chrX:390804-390904 9.9e-08 41_[-2]_39 chrVIII:237746-238131 1.2e-07 25_[-2]_55 chrXIV:374693-375136 1.2e-07 10_[+2]_70 chrVIII:358283-358762 1.2e-07 71_[-2]_9 chrX:517648-517748 1.3e-07 48_[-2]_32 chrIII:149715-150190 1.3e-07 23_[+2]_57 chrXVI:775614-776033 5.5e-07 37_[-2]_43 chrII:642843-643250 5.5e-07 56_[-2]_24 chrXVI:435653-436195 5.5e-07 64_[-2]_16 chrIV:83351-83841 6e-07 7_[+2]_73 chrXV:226432-226915 6e-07 32_[-2]_48 chrVII:661541-661945 9.5e-07 61_[+2]_19 chrVII:1004037-1004436 9.5e-07 35_[+2]_45 chrXIII:837756-838208 9.5e-07 1_[+2]_79 chrXVI:744067-744595 9.5e-07 8_[+2]_72 chrX:542765-542865 9.5e-07 55_[-2]_25 chrVI:167251-167729 9.5e-07 2_[+2]_78 chrXIII:168227-169382 9.5e-07 46_[+2]_34 chrI:138990-139368 1.6e-06 28_[+2]_52 chrXIII:195934-196301 1.6e-06 77_[-2]_3 chrXI:302681-303231 1.8e-06 17_[+2]_63 chrVII:287149-287779 1.8e-06 15_[-2]_65 chrXIII:131623-132109 3e-06 54_[-2]_26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYYAGTKGKWWRRGSS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KTGGCYYAGTKGKWWRRGSS width=20 seqs=54 chrXV:274449-275007 ( 1) GTGGCCGAGTGGTTAAGGCG 1 chrIV:1150736-1151159 ( 19) GTGGCCGAGTGGTTAAGGCG 1 chrXII:167783-168231 ( 43) TTGGCCGAGTGGTTAAGGCG 1 chrIV:1305448-1305891 ( 17) TTGGCCGAGTGGTTAAGGCG 1 chrXIV:602085-602575 ( 38) TTGGCCCAGTTGGTTAAGGC 1 chrIV:409985-410792 ( 47) GTGGCGTAGTCGGTAGCGCG 1 chrXII:656824-657218 ( 10) GTGGCGTAGTCGGTAGCGCG 1 chrXI:219670-220119 ( 57) GTGGCGTAGTCGGTAGCGCG 1 chrX:617718-617818 ( 19) TTGGCCGAGTGGTTTAAGGC 1 chrXII:592346-592810 ( 66) TTGGCCGAGTGGTTTAAGGC 1 chrV:492192-492571 ( 68) GTGGCCCAATGGTCACGGCG 1 chrXV:340134-340586 ( 36) GTGGCCCAATGGTCACGGCG 1 chrXI:490773-491267 ( 4) GTGGCCCAATGGTCACGGCG 1 chrXV:353905-354305 ( 33) ATGGCCAAGTTGGTAAGGCG 1 chrXI:84008-84453 ( 34) TTGGCCGAGTGGTCTAAGGC 1 chrXII:962815-963316 ( 15) TTGGCCGAGTGGTCTAAGGC 1 chrVII:115325-115762 ( 1) TTAGCTCAGTTGGTAGAGCG 1 chrIV:359359-359870 ( 19) TTAGCTCAGTTGGTAGAGCG 1 chrIV:1201527-1202009 ( 38) TTGGCGCAATCGGTAGCGCG 1 chrIV:1352062-1353052 ( 6) TTGGCGCAATCGGTAGCGCG 1 chrIX:300078-300492 ( 40) TTGGCGCAATCGGTAGCGCG 1 chrXVI:581851-582342 ( 22) TTGGCGCAATCGGTAGCGCG 1 chrIII:127539-127901 ( 52) ATGGCCAAGTTGGTTAAGGC 1 chrXV:228076-228577 ( 61) ATGGCCAAGTTGGTTAAGGC 1 chrXII:975820-976197 ( 73) ATGGCCAAGTTGGTTAAGGC 1 chrV:438519-438968 ( 13) GTGGTCTAGTCGGTTATGGC 1 chrX:378218-378318 ( 16) GTGGTCTAGTCGGTTATGGC 1 chrXI:307893-308434 ( 79) GTGGTCTAGTCGGTTATGGC 1 chrVII:823339-823729 ( 4) GTGGTCTAGTCGGTTATGGC 1 chrVII:412062-412595 ( 64) GTGGTCTAGTCGGTTATGGC 1 chrX:422682-422782 ( 61) GTAGCTCAGTAGGAAGAGCG 1 chrX:390804-390904 ( 42) GTAGCTCAGTAGGAAGAGCG 1 chrVIII:237746-238131 ( 26) TTAGCTCAGTTGGGAGAGCG 1 chrXIV:374693-375136 ( 11) TTAGCTCAGTTGGGAGAGCG 1 chrVIII:358283-358762 ( 72) TTAGCTCAGTTGGGAGAGCG 1 chrX:517648-517748 ( 49) GTGGCGCAGTGGAAGCGCGC 1 chrIII:149715-150190 ( 24) GTGGCGCAGTGGAAGCGCGC 1 chrXVI:775614-776033 ( 38) ATGGCGCAGTGGTAGCGCAG 1 chrII:642843-643250 ( 57) ATGGCGCAGTGGTAGCGCAG 1 chrXVI:435653-436195 ( 65) ATGGCGCAGTGGTAGCGCAG 1 chrIV:83351-83841 ( 8) GTGGTTTAGTGGTAAAATCC 1 chrXV:226432-226915 ( 33) GTGGTTTAGTGGTAAAATCC 1 chrVII:661541-661945 ( 62) TTAGCTTAGTGGTAGAGCGT 1 chrVII:1004037-1004436 ( 36) TTAGCTTAGTGGTAGAGCGT 1 chrXIII:837756-838208 ( 2) GTAGCCAAGTTGGTTTAAGG 1 chrXVI:744067-744595 ( 9) TTAGCTTAGTGGTAGAGCGT 1 chrX:542765-542865 ( 56) GTAGCCAAGTTGGTTTAAGG 1 chrVI:167251-167729 ( 3) GTAGCCAAGTTGGTTTAAGG 1 chrXIII:168227-169382 ( 47) GTAGCCAAGTTGGTTTAAGG 1 chrI:138990-139368 ( 29) GTGGTCTAGTGGTATGATTC 1 chrXIII:195934-196301 ( 78) GTGGTCTAGTGGTATGATTC 1 chrXI:302681-303231 ( 18) GTGGCTCAATGGTAGAGCTT 1 chrVII:287149-287779 ( 16) GTGGCTCAATGGTAGAGCTT 1 chrXIII:131623-132109 ( 55) GTGGCGTAATGGCAACGCGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYYAGTKGKWWRRGSS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 48600 bayes= 10.3817 E= 5.9e-092 -125 -1240 144 19 -1240 -1240 -1240 170 -25 -1240 195 -1240 -1240 -1240 238 -1240 -1240 212 -1240 -89 -1240 138 33 -25 -106 109 -37 -6 170 -1240 -1240 -1240 -74 -1240 209 -1240 -1240 -1240 -1240 170 -306 21 133 -25 -1240 -1240 238 -1240 -306 -337 144 47 3 -105 -179 80 59 -1240 -5 19 59 -20 63 -206 47 -56 88 -173 -206 9 176 -206 -247 121 115 -206 -1240 88 149 -147 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYYAGTKGKWWRRGSS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 54 E= 5.9e-092 0.129630 0.000000 0.518519 0.351852 0.000000 0.000000 0.000000 1.000000 0.259259 0.000000 0.740741 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.833333 0.000000 0.166667 0.000000 0.500000 0.240741 0.259259 0.148148 0.407407 0.148148 0.296296 1.000000 0.000000 0.000000 0.000000 0.185185 0.000000 0.814815 0.000000 0.000000 0.000000 0.000000 1.000000 0.037037 0.222222 0.481481 0.259259 0.000000 0.000000 1.000000 0.000000 0.037037 0.018519 0.518519 0.425926 0.314815 0.092593 0.055556 0.537037 0.462963 0.000000 0.185185 0.351852 0.462963 0.166667 0.296296 0.074074 0.425926 0.129630 0.351852 0.092593 0.074074 0.203704 0.648148 0.074074 0.055556 0.444444 0.425926 0.074074 0.000000 0.351852 0.537037 0.111111 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KTGGCYYAGTKGKWWRRGSS MEME-2 regular expression -------------------------------------------------------------------------------- [GT]T[GA]GC[CTG][CT]AGT[GTC]G[GT][TA][AT][AG][AG][GC][CG][GC] -------------------------------------------------------------------------------- Time 668.80 secs. ******************************************************************************** ******************************************************************************** MOTIF TWYTTTTTTWTTTTT MEME-3 width = 15 sites = 126 llr = 1149 E-value = 3.4e-038 ******************************************************************************** -------------------------------------------------------------------------------- Motif TWYTTTTTTWTTTTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 14::1::::422::: pos.-specific C 113:1:232:31:32 probability G :11:::1:::::::2 matrix T 846a8a778667a76 bits 2.4 2.1 1.9 1.7 * * * Relative 1.4 * * * Entropy 1.2 * * * (13.2 bits) 1.0 * *** ** ** 0.7 * ****** *** 0.5 * ************* 0.2 * ************* 0.0 --------------- Multilevel TTTTTTTTTTTTTTT consensus AC CCACA C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWYTTTTTTWTTTTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrVII:400333-400833 + 18 2.13e-08 AACCTTTTAG TTTTTTTTTTTTTTT TTTTTTATTT chrIV:519661-520074 + 83 2.13e-08 CCAAGTAATG TTTTTTTTTTTTTTT TTT chrX:531583-531683 + 36 3.21e-07 CTTGCGCAGT TTCTTTTCTTTTTTT CTGGAAAATA chrVIII:125938-126298 + 81 3.21e-07 GCACCTACAC TGTTTTTTTTTTTTT CACCT chrXIII:837756-838208 + 85 4.33e-07 CCCCGGGAGA TATTTTTTTACTTTT G chrXVI:282032-283252 + 57 4.33e-07 GGGATTTTAT TCCTTTTTTTTTTTT AGTGTACGTC chrXV:109884-111486 - 53 7.09e-07 ATTTTTCTCC TCTTTTTTTATTTTT AAAAAAAGAA chrVII:120734-121262 - 80 7.09e-07 GAAGCT TTTTTTTTTTCTTTC TTTAATCTAC chrXV:903639-904656 - 42 7.09e-07 CGGGATTGTT TTCTTTTTTTTTTTG CATATTCCCG chrXIV:568059-568545 - 58 1.74e-06 ATTAATGCAT TTTTTTTTTTTATCT CCAGCATTAA chrIV:83351-83841 + 80 2.12e-06 GCAAGTTTAA TTTTTTTTCTTTTTC CACATT chrVII:726415-726737 + 7 2.55e-06 ATCATG TCCTTTTTTTTTTTG CCATTCTTAT chrI:181132-181452 + 14 2.55e-06 TAGCAACCAT TATTTTTTCTTTTTC CTCCTATACT chrIX:255024-257143 - 78 2.55e-06 TTGAATCT TCCTTTTTTATTTCT GTGTTAAATT chrIV:1012745-1013923 - 80 2.55e-06 TTTGTT TCCTTTCTTTTTTTT TGTTTCTCTT chrIX:321541-324375 - 31 2.55e-06 CCACATCGAT TATTTTTTCACTTTT TAAAATCTGA chrXII:92310-92970 + 63 3.04e-06 CTCGCCCCTT TATTTTCTTTTTTTG GACCCAAAGA chrV:85135-87446 + 55 3.61e-06 CACAAATAAA TCCTTTTTTTTATTT TCTATTTATT chrVII:401351-401616 - 34 3.61e-06 TGAAGAAAAT TTTTTTTCTTCATTT CGGAGAAAAA chrXIV:715439-717081 + 43 3.61e-06 CTTTTGTCCA TCTTTTTTTTATTTT GAAGGCGTGT chrVI:222691-225293 - 54 3.61e-06 GACTTTTTTT TGGTTTTTTTTTTTT AGTTCTGTAA chrIV:769516-771009 - 4 3.61e-06 TTATTTTTTC TGCTTTTCTATTTTT CTC chrVII:779422-779922 + 70 4.25e-06 CGCTCAAGAT TACTTTTTTAATTTT CATACTTTTT chrV:221443-222182 - 53 4.25e-06 TTCAATTGTC TTGTTTTTTTTTTTG TTTTTCTCGT chrIV:1239360-1240669 + 28 4.25e-06 ATTTTTTTAA TTTTTTCTCTCTTTT CCGGAGAATT chrXIII:50719-51408 + 46 4.97e-06 GTGTGATCCT TTTTTTTCCACTTTT TCAGTTTTTG chrIII:177062-178826 + 78 4.97e-06 TCCAAAAGTT TTTTTTTTTAATTCT TACATAGT chrX:701770-701870 - 69 4.97e-06 ATTTTTGCCC TTTTTTCTCATTTTT TTCCGTACAG chrXIV:529185-530381 - 4 4.97e-06 AACATTTTTG TATTTTTTCACTTCT AAA chrIV:1175747-1176114 + 38 4.97e-06 CCGAGCACGG TACTTTTTTTTATTC TCAGTAAATG chrVIII:54206-54678 + 5 4.97e-06 CCTG TTTTTTTCCACTTTT GTGTAGGAAG chrXVI:768592-769478 + 83 4.97e-06 TAAGAATTAT TTTTTTTTTTCATTC AAT chrIII:142067-142960 + 83 5.77e-06 GCATTAAGCT TATTTTTTTAATTCT TAT chrVII:730940-731570 + 59 6.67e-06 TCCTCCAGTT TTCTTTTTTTCCTCT AGGTTTTAAC chrV:141084-141315 + 10 6.67e-06 GAGGCGTAG TTTTTTGTTTATTTT TTCCCAATTT chrXI:630523-630834 + 1 6.67e-06 . CTCTTTTCTTTTTTT GACTCACAAT chrXII:1028240-1028529 + 2 7.68e-06 C TTTTTTCCTTCTTTC TTCCTTGTCT chrXII:796989-797554 + 39 7.68e-06 ATATATTTAA TATTTTTTTTAATTT GACTTCAAAT chrIII:151034-151502 + 36 7.68e-06 ACATGTAATG TAGTTTCTTTCTTTT TCCAAGAAAA chrXII:448502-448949 + 86 7.68e-06 ATTGTTGACG TTCTCTTCTTTTTTT chrXIII:145832-146242 + 18 7.68e-06 CCCTTCTGGG TTCTTTTCTTCCTTT TCTTGTTTAC chrXII:1011675-1012597 - 78 8.76e-06 TGTGTGTG TGCTTTTTCTTTTTC CCGCCAGTGG chrXI:93581-95169 - 30 8.76e-06 TTTTGCAGCT TTTTTTCCCTCTTTT TTTGAGCAGG chrXIII:225290-225670 + 27 8.76e-06 TTCTGTATTA TACTTTTCTATTTCG AACTTTTTGA chrVI:106543-106873 - 9 8.76e-06 TCACCGACCC TTTTTTTCCATTTTC GGCTGGGC chrII:603648-607559 + 25 9.99e-06 TTTTTCATTT TACTTTGTCATTTTT ATTTCATTTG chrIV:884252-884677 + 82 9.99e-06 CTCGAGCACT TTCTCTTTTTTTTTC ACAC chrXII:1051910-1052219 - 41 1.13e-05 TAGAGACCAT TATTTTTTTTACTTT AAGTAAATAA chrIX:68279-68480 + 45 1.13e-05 CTAAGATGTA TGGTTTTTCTTTTTT TGTGCTCCGT chrII:326490-327072 - 39 1.28e-05 TCAAACTCTT TATTTTTTTAAATTT GCTAATTTAG chrXVI:880023-880580 - 26 1.28e-05 AGACCATTTC TTTTCTCTTTCTTTT TCTCGAAAGA chrXVI:572181-573377 - 1 1.28e-05 GTGCTGTTAT CCCTTTTTTTTTTCT chrVI:191095-191850 - 73 1.44e-05 TGTGACGCAT TTCTTTTTTAAATTT TTGCTTCTTA chrXIV:720371-723201 - 49 1.44e-05 CAGAAGGTTT TTTTTTTTCAATTCT AACTTTACAA chrVII:545102-546060 + 9 1.44e-05 ATGCATCC TTTTTTCTTTCATTC AATGACACAT chrIII:107054-107849 - 61 1.44e-05 TATGTATACT TATTTTGCTTATTTT TCTTATACTC chrIV:667796-668246 - 17 1.62e-05 AGACCATTTT TATTTTTTCTCCTCT ATTGTTAAAA chrXIV:575103-576203 - 10 1.80e-05 ATAAAGCGGG AATTTTTTTTTTTCT ATGCATTTA chrIII:78413-79263 + 13 1.80e-05 AGTTCTTGAT TTTTTTTTTGTTTCT GTCCTTGCCA chrXI:571109-571450 + 85 2.00e-05 TCATTTTATA CGTTTTTCTTTTTCT A chrXIII:91773-92120 - 14 2.00e-05 AAAAAATGTC TTGTTTCTTTTTTCG GTATATTTGA chrVI:167251-167729 + 86 2.00e-05 CCCCGGGAGA TATTTTTTTAAATCT chrVIII:103721-105496 + 22 2.23e-05 CCGGAGATGT TTCTATTCTTTTTTT GCATAAACAA chrVII:774140-774750 + 27 2.47e-05 GACTCGTCCA AATTTTTTTACTTTT AATGAGGTAT chrII:405693-406275 + 14 2.47e-05 CCATCGTGAG TGCTTTGTTTCTTCC GTGATAGTTT chrIII:81885-82659 - 48 2.47e-05 GATTATCCCT CCCTTTTTTTTATTT GTCCAAAACA chrII:88900-89529 + 31 2.47e-05 GTTGCGGAAT TTTTTTCTTATCTTG AAATATGCTT chrIV:568710-569282 + 6 2.47e-05 GTGAG TGCTTTGTTTCTTCC GTGATAGTTT chrXI:490773-491267 + 71 2.47e-05 GGCGGGGAAG AATTTTTTTACTTTT ATAATTTTCT chrXV:281962-282521 + 75 2.72e-05 AAATGTCAAT TTTTTTGCCATTTTC TAAATAGTTT chrV:288155-288741 - 33 2.99e-05 CCTGCTGGTG TCGTTTTTTTTATTG TTAGAGGTGC chrXII:1028813-1030313 - 60 3.29e-05 GTTAGCTTCC TTCTTTTCCTTCTTG GTCAATTTTT chrXVI:172906-174135 + 81 3.62e-05 CTTTGCTAAC ATTTTTTTCATTTTT GAATA chrVII:736168-737117 + 6 3.62e-05 CATAT TAGTTTCTTTTATTC CCAGACTTTC chrIV:795759-796125 + 38 3.62e-05 TAAGATTACA TCCTTTCCTATTTCG GCAAAAATGA chrXIII:30187-30690 - 61 3.96e-05 GGATGATTGA CACTTTCTTATTTTG TGTTTTTATT chrIV:472662-473386 + 30 3.96e-05 TTAATCAAAC CTTTTTGTTTTCTTT AAAGTCGAAA chrXIV:576660-577670 - 78 3.96e-05 TCGGAAAC TAGTTTCTTTTATTG AGACTTATTT chrV:550851-551591 + 42 3.96e-05 ATTGAAGACA TCATTTTTTATTTTT TTAAGCAGAA chrXII:533974-535901 + 72 3.96e-05 TACTGCTGTA TTTTCTGTTATTTTG ATTGCCTTGG chrXV:1003894-1004941 + 31 3.96e-05 AGAAGTCAAA AATTTTTCTTCTTCT CCTTTTCTTG chrXI:313035-314012 + 57 4.33e-05 ATAATATGTA CTCTTTGCTTTTTTC TGTTAAACCT chrXV:571746-572340 + 39 4.33e-05 TCGCGGAGAT TTTTTTGCTAATTTG ATGTGTTCTC chrV:60987-62165 - 48 4.33e-05 GTCGAATGGA TATTTTTCTTAATCC AACCGTACCG chrIV:980701-981150 + 22 4.33e-05 CCTTTCAAAT TATTCTTTTTTATCG CATTGTCATT chrXII:214576-215063 - 84 4.73e-05 TT TATTCTCCTTTATTT TTAACAATTT chrXIII:625836-627311 + 80 4.73e-05 CCACCCCGAT TTGTATTTTATTTTT CGTTAC chrII:44957-45342 - 17 5.16e-05 GTTCTTCATT TCTTTTTCCTAATTT TGATAGAGAC chrXV:353905-354305 + 69 5.16e-05 AGTAAACCGT TATTTTGTTGTTTCT CAGAGTGGTA chrIX:370226-370611 - 24 5.16e-05 TTATAATCTA TATTTTTTCTACTTC GATCTTATGT chrXV:409227-409971 - 52 5.16e-05 CCTCATCCGG ATTTTTCTTATTTCT AGAAACAGCG chrXII:366046-366557 + 85 5.61e-05 CAAAGAGATT TATTTCGTTTTTTTT T chrXIV:351587-352939 - 21 6.09e-05 CCTCTCGCTT TGTTCTTTTTCCTCT GACATGCATG chrVI:101162-102044 + 2 6.09e-05 A TTTTTTTTTACTTAC TCAATACTAA chrXIV:560171-561012 - 51 6.09e-05 TATTTAAGTG TGATTTCTTTTTTTT TATAAAAGTT chrXVI:559949-560496 - 7 6.09e-05 TTCGCATTTC TATTTTTGTATTTTT CCATGA chrX:606087-606187 - 37 6.09e-05 CACAGCCAAT TAGTTTTCTATATCG GGAAACGTGA chrX:662748-662848 + 14 6.09e-05 CCACTATTCG TAGTTTGTTACATCT TGTAAGCCAG chrXV:259295-259985 + 8 6.61e-05 ACATTTC CTTTATTTTTTTTCT AGCCCGTAGT chrXIII:872630-873053 - 77 6.61e-05 ATACGGATG TAATTTTTCACTTTT CGTCTTGACG chrIV:1384575-1385115 + 26 6.61e-05 TGTAATCAAC TACTTTTTATTTTCT ATGTACGCAT chrXVI:376900-377390 + 70 6.61e-05 ATACATATGA TTATTTTTCTTTTTG TTAATTATAT chrXI:513033-513602 - 44 7.17e-05 GGAGATTTTT TATTTTGCTTTTTAT TCCTCCTGTA chrVII:531385-532018 - 48 7.76e-05 TCTTCAGTTT TGCTATCTTATTTTT GTGATGATAA chrXIII:162950-164381 - 60 7.76e-05 AAATTTTTGG TATTATGTTTCTTTC ATTAGAATGC chrIV:125322-126110 - 86 8.39e-05 . TGCTTTTTTGTTTCG AAATCACGAG chrVII:541723-542167 + 31 8.39e-05 TCGGAGTGTT CTTTTTCTTACCTCT TGAAAAAGAG chrIV:465200-465564 + 84 9.06e-05 CCGTTTAAAT CCGTTTTCTATTTTC TT chrXV:92030-94748 - 15 9.06e-05 ATTTCATATT TACTTTTTTATTGTT ACTCATTTGT chrIX:210663-211470 + 66 9.06e-05 GGTGTGTCTG AACTCTTTTATTTTT CGTCACTTTG chrVII:554822-557543 - 9 9.77e-05 AACTTCCTAC TTTTCTTCTATCTCC TCTGCGTA chrVII:422898-423575 + 21 1.05e-04 TAGCAACCAT TATTTTTTTCCATTT AAAATGATCT chrX:196223-196323 - 33 1.22e-04 TTCATCGTCA TCTTCTTCTTCATCG TCCTCCTCCT chrXV:32078-32253 - 39 1.22e-04 CCAAGTCGTA TATTTTTCTTTATAC TGCTAGTTCA chrVIII:113825-116394 + 82 1.22e-04 CATTTTAGAC TATTTTTTAATATTT CCCT chrVI:53108-55722 - 83 1.31e-04 ATA TTCTTCTTTTATTTG CTACTGTTAC chrXV:234213-234838 + 44 1.31e-04 TGGGGGAAGA CGCTTTTTCACATCT TCTTGCATGA chrII:555817-556043 - 35 1.31e-04 TAATTGTGTT TTGTTTGTTTACTTC TGCAAGTTAA chrVIII:296971-297143 + 75 1.40e-04 TGCATGCTCT CATTTCTTTACTTTT TGCTAGCAGA chrIV:1245613-1246169 + 38 1.40e-04 CCATCTATAG TGTTATTTCATATTT AATCATATTT chrXII:241689-243535 - 42 1.40e-04 ATATATAATG TTTTCTTCCATATCC AATAAAGTAC chrXVI:927764-928169 - 5 1.50e-04 TGCATTAACG CGTTTTTCCTATTTG GGTA chrXI:567194-567471 + 24 1.50e-04 CGCTCCAGGG TCCTTTCCTAAATTG GTAACAGCCG chrXI:558574-559497 - 5 1.60e-04 TCTTGATGGT TACTTTGTTATATAT ACGT chrVI:180678-181233 + 15 1.83e-04 TATTTTCATC TTGTCTGTTATATTC TCGGAAGCTT chrIII:57317-60851 - 56 1.95e-04 CCTGCGCCGT TATTATTCCTCCTCT CCCAATGGAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWYTTTTTTWTTTTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVII:400333-400833 2.1e-08 17_[+3]_68 chrIV:519661-520074 2.1e-08 82_[+3]_3 chrX:531583-531683 3.2e-07 35_[+3]_50 chrVIII:125938-126298 3.2e-07 80_[+3]_5 chrXIII:837756-838208 4.3e-07 84_[+3]_1 chrXVI:282032-283252 4.3e-07 56_[+3]_29 chrXV:109884-111486 7.1e-07 52_[-3]_33 chrVII:120734-121262 7.1e-07 79_[-3]_6 chrXV:903639-904656 7.1e-07 41_[-3]_44 chrXIV:568059-568545 1.7e-06 57_[-3]_28 chrIV:83351-83841 2.1e-06 79_[+3]_6 chrVII:726415-726737 2.6e-06 6_[+3]_79 chrI:181132-181452 2.6e-06 13_[+3]_72 chrIX:255024-257143 2.6e-06 77_[-3]_8 chrIV:1012745-1013923 2.6e-06 79_[-3]_6 chrIX:321541-324375 2.6e-06 30_[-3]_55 chrXII:92310-92970 3e-06 62_[+3]_23 chrV:85135-87446 3.6e-06 54_[+3]_31 chrVII:401351-401616 3.6e-06 33_[-3]_52 chrXIV:715439-717081 3.6e-06 42_[+3]_43 chrVI:222691-225293 3.6e-06 53_[-3]_32 chrIV:769516-771009 3.6e-06 3_[-3]_82 chrVII:779422-779922 4.3e-06 69_[+3]_16 chrV:221443-222182 4.3e-06 52_[-3]_33 chrIV:1239360-1240669 4.3e-06 27_[+3]_58 chrXIII:50719-51408 5e-06 45_[+3]_40 chrIII:177062-178826 5e-06 77_[+3]_8 chrX:701770-701870 5e-06 68_[-3]_17 chrXIV:529185-530381 5e-06 3_[-3]_82 chrIV:1175747-1176114 5e-06 37_[+3]_48 chrVIII:54206-54678 5e-06 4_[+3]_81 chrXVI:768592-769478 5e-06 82_[+3]_3 chrIII:142067-142960 5.8e-06 82_[+3]_3 chrVII:730940-731570 6.7e-06 58_[+3]_27 chrV:141084-141315 6.7e-06 9_[+3]_76 chrXI:630523-630834 6.7e-06 [+3]_85 chrXII:1028240-1028529 7.7e-06 1_[+3]_84 chrXII:796989-797554 7.7e-06 38_[+3]_47 chrIII:151034-151502 7.7e-06 35_[+3]_50 chrXII:448502-448949 7.7e-06 85_[+3] chrXIII:145832-146242 7.7e-06 17_[+3]_68 chrXII:1011675-1012597 8.8e-06 77_[-3]_8 chrXI:93581-95169 8.8e-06 29_[-3]_56 chrXIII:225290-225670 8.8e-06 26_[+3]_59 chrVI:106543-106873 8.8e-06 8_[-3]_77 chrII:603648-607559 1e-05 24_[+3]_61 chrIV:884252-884677 1e-05 81_[+3]_4 chrXII:1051910-1052219 1.1e-05 40_[-3]_45 chrIX:68279-68480 1.1e-05 44_[+3]_41 chrII:326490-327072 1.3e-05 38_[-3]_47 chrXVI:880023-880580 1.3e-05 25_[-3]_60 chrXVI:572181-573377 1.3e-05 [-3]_85 chrVI:191095-191850 1.4e-05 72_[-3]_13 chrXIV:720371-723201 1.4e-05 48_[-3]_37 chrVII:545102-546060 1.4e-05 8_[+3]_77 chrIII:107054-107849 1.4e-05 60_[-3]_25 chrIV:667796-668246 1.6e-05 16_[-3]_69 chrXIV:575103-576203 1.8e-05 9_[-3]_76 chrIII:78413-79263 1.8e-05 12_[+3]_73 chrXI:571109-571450 2e-05 84_[+3]_1 chrXIII:91773-92120 2e-05 13_[-3]_72 chrVI:167251-167729 2e-05 85_[+3] chrVIII:103721-105496 2.2e-05 21_[+3]_64 chrVII:774140-774750 2.5e-05 26_[+3]_59 chrII:405693-406275 2.5e-05 13_[+3]_72 chrIII:81885-82659 2.5e-05 47_[-3]_38 chrII:88900-89529 2.5e-05 30_[+3]_55 chrIV:568710-569282 2.5e-05 5_[+3]_80 chrXI:490773-491267 2.5e-05 70_[+3]_15 chrXV:281962-282521 2.7e-05 74_[+3]_11 chrV:288155-288741 3e-05 32_[-3]_53 chrXII:1028813-1030313 3.3e-05 59_[-3]_26 chrXVI:172906-174135 3.6e-05 80_[+3]_5 chrVII:736168-737117 3.6e-05 5_[+3]_80 chrIV:795759-796125 3.6e-05 37_[+3]_48 chrXIII:30187-30690 4e-05 60_[-3]_25 chrIV:472662-473386 4e-05 29_[+3]_56 chrXIV:576660-577670 4e-05 77_[-3]_8 chrV:550851-551591 4e-05 41_[+3]_44 chrXII:533974-535901 4e-05 71_[+3]_14 chrXV:1003894-1004941 4e-05 30_[+3]_55 chrXI:313035-314012 4.3e-05 56_[+3]_29 chrXV:571746-572340 4.3e-05 38_[+3]_47 chrV:60987-62165 4.3e-05 47_[-3]_38 chrIV:980701-981150 4.3e-05 21_[+3]_64 chrXII:214576-215063 4.7e-05 83_[-3]_2 chrXIII:625836-627311 4.7e-05 79_[+3]_6 chrII:44957-45342 5.2e-05 16_[-3]_69 chrXV:353905-354305 5.2e-05 68_[+3]_17 chrIX:370226-370611 5.2e-05 23_[-3]_62 chrXV:409227-409971 5.2e-05 51_[-3]_34 chrXII:366046-366557 5.6e-05 84_[+3]_1 chrXIV:351587-352939 6.1e-05 20_[-3]_65 chrVI:101162-102044 6.1e-05 1_[+3]_84 chrXIV:560171-561012 6.1e-05 50_[-3]_35 chrXVI:559949-560496 6.1e-05 6_[-3]_79 chrX:606087-606187 6.1e-05 36_[-3]_49 chrX:662748-662848 6.1e-05 13_[+3]_72 chrXV:259295-259985 6.6e-05 7_[+3]_78 chrXIII:872630-873053 6.6e-05 76_[-3]_9 chrIV:1384575-1385115 6.6e-05 25_[+3]_60 chrXVI:376900-377390 6.6e-05 69_[+3]_16 chrXI:513033-513602 7.2e-05 43_[-3]_42 chrVII:531385-532018 7.8e-05 47_[-3]_38 chrXIII:162950-164381 7.8e-05 59_[-3]_26 chrIV:125322-126110 8.4e-05 85_[-3] chrVII:541723-542167 8.4e-05 30_[+3]_55 chrIV:465200-465564 9.1e-05 83_[+3]_2 chrXV:92030-94748 9.1e-05 14_[-3]_71 chrIX:210663-211470 9.1e-05 65_[+3]_20 chrVII:554822-557543 9.8e-05 8_[-3]_77 chrVII:422898-423575 0.00011 20_[+3]_65 chrX:196223-196323 0.00012 32_[-3]_53 chrXV:32078-32253 0.00012 38_[-3]_47 chrVIII:113825-116394 0.00012 81_[+3]_4 chrVI:53108-55722 0.00013 82_[-3]_3 chrXV:234213-234838 0.00013 43_[+3]_42 chrII:555817-556043 0.00013 34_[-3]_51 chrVIII:296971-297143 0.00014 74_[+3]_11 chrIV:1245613-1246169 0.00014 37_[+3]_48 chrXII:241689-243535 0.00014 41_[-3]_44 chrXVI:927764-928169 0.00015 4_[-3]_81 chrXI:567194-567471 0.00015 23_[+3]_62 chrXI:558574-559497 0.00016 4_[-3]_81 chrVI:180678-181233 0.00018 14_[+3]_71 chrIII:57317-60851 0.00019 55_[-3]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWYTTTTTTWTTTTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TWYTTTTTTWTTTTT width=15 seqs=126 chrVII:400333-400833 ( 18) TTTTTTTTTTTTTTT 1 chrIV:519661-520074 ( 83) TTTTTTTTTTTTTTT 1 chrX:531583-531683 ( 36) TTCTTTTCTTTTTTT 1 chrVIII:125938-126298 ( 81) TGTTTTTTTTTTTTT 1 chrXIII:837756-838208 ( 85) TATTTTTTTACTTTT 1 chrXVI:282032-283252 ( 57) TCCTTTTTTTTTTTT 1 chrXV:109884-111486 ( 53) TCTTTTTTTATTTTT 1 chrVII:120734-121262 ( 80) TTTTTTTTTTCTTTC 1 chrXV:903639-904656 ( 42) TTCTTTTTTTTTTTG 1 chrXIV:568059-568545 ( 58) TTTTTTTTTTTATCT 1 chrIV:83351-83841 ( 80) TTTTTTTTCTTTTTC 1 chrVII:726415-726737 ( 7) TCCTTTTTTTTTTTG 1 chrI:181132-181452 ( 14) TATTTTTTCTTTTTC 1 chrIX:255024-257143 ( 78) TCCTTTTTTATTTCT 1 chrIV:1012745-1013923 ( 80) TCCTTTCTTTTTTTT 1 chrIX:321541-324375 ( 31) TATTTTTTCACTTTT 1 chrXII:92310-92970 ( 63) TATTTTCTTTTTTTG 1 chrV:85135-87446 ( 55) TCCTTTTTTTTATTT 1 chrVII:401351-401616 ( 34) TTTTTTTCTTCATTT 1 chrXIV:715439-717081 ( 43) TCTTTTTTTTATTTT 1 chrVI:222691-225293 ( 54) TGGTTTTTTTTTTTT 1 chrIV:769516-771009 ( 4) TGCTTTTCTATTTTT 1 chrVII:779422-779922 ( 70) TACTTTTTTAATTTT 1 chrV:221443-222182 ( 53) TTGTTTTTTTTTTTG 1 chrIV:1239360-1240669 ( 28) TTTTTTCTCTCTTTT 1 chrXIII:50719-51408 ( 46) TTTTTTTCCACTTTT 1 chrIII:177062-178826 ( 78) TTTTTTTTTAATTCT 1 chrX:701770-701870 ( 69) TTTTTTCTCATTTTT 1 chrXIV:529185-530381 ( 4) TATTTTTTCACTTCT 1 chrIV:1175747-1176114 ( 38) TACTTTTTTTTATTC 1 chrVIII:54206-54678 ( 5) TTTTTTTCCACTTTT 1 chrXVI:768592-769478 ( 83) TTTTTTTTTTCATTC 1 chrIII:142067-142960 ( 83) TATTTTTTTAATTCT 1 chrVII:730940-731570 ( 59) TTCTTTTTTTCCTCT 1 chrV:141084-141315 ( 10) TTTTTTGTTTATTTT 1 chrXI:630523-630834 ( 1) CTCTTTTCTTTTTTT 1 chrXII:1028240-1028529 ( 2) TTTTTTCCTTCTTTC 1 chrXII:796989-797554 ( 39) TATTTTTTTTAATTT 1 chrIII:151034-151502 ( 36) TAGTTTCTTTCTTTT 1 chrXII:448502-448949 ( 86) TTCTCTTCTTTTTTT 1 chrXIII:145832-146242 ( 18) TTCTTTTCTTCCTTT 1 chrXII:1011675-1012597 ( 78) TGCTTTTTCTTTTTC 1 chrXI:93581-95169 ( 30) TTTTTTCCCTCTTTT 1 chrXIII:225290-225670 ( 27) TACTTTTCTATTTCG 1 chrVI:106543-106873 ( 9) TTTTTTTCCATTTTC 1 chrII:603648-607559 ( 25) TACTTTGTCATTTTT 1 chrIV:884252-884677 ( 82) TTCTCTTTTTTTTTC 1 chrXII:1051910-1052219 ( 41) TATTTTTTTTACTTT 1 chrIX:68279-68480 ( 45) TGGTTTTTCTTTTTT 1 chrII:326490-327072 ( 39) TATTTTTTTAAATTT 1 chrXVI:880023-880580 ( 26) TTTTCTCTTTCTTTT 1 chrXVI:572181-573377 ( 1) CCCTTTTTTTTTTCT 1 chrVI:191095-191850 ( 73) TTCTTTTTTAAATTT 1 chrXIV:720371-723201 ( 49) TTTTTTTTCAATTCT 1 chrVII:545102-546060 ( 9) TTTTTTCTTTCATTC 1 chrIII:107054-107849 ( 61) TATTTTGCTTATTTT 1 chrIV:667796-668246 ( 17) TATTTTTTCTCCTCT 1 chrXIV:575103-576203 ( 10) AATTTTTTTTTTTCT 1 chrIII:78413-79263 ( 13) TTTTTTTTTGTTTCT 1 chrXI:571109-571450 ( 85) CGTTTTTCTTTTTCT 1 chrXIII:91773-92120 ( 14) TTGTTTCTTTTTTCG 1 chrVI:167251-167729 ( 86) TATTTTTTTAAATCT 1 chrVIII:103721-105496 ( 22) TTCTATTCTTTTTTT 1 chrVII:774140-774750 ( 27) AATTTTTTTACTTTT 1 chrII:405693-406275 ( 14) TGCTTTGTTTCTTCC 1 chrIII:81885-82659 ( 48) CCCTTTTTTTTATTT 1 chrII:88900-89529 ( 31) TTTTTTCTTATCTTG 1 chrIV:568710-569282 ( 6) TGCTTTGTTTCTTCC 1 chrXI:490773-491267 ( 71) AATTTTTTTACTTTT 1 chrXV:281962-282521 ( 75) TTTTTTGCCATTTTC 1 chrV:288155-288741 ( 33) TCGTTTTTTTTATTG 1 chrXII:1028813-1030313 ( 60) TTCTTTTCCTTCTTG 1 chrXVI:172906-174135 ( 81) ATTTTTTTCATTTTT 1 chrVII:736168-737117 ( 6) TAGTTTCTTTTATTC 1 chrIV:795759-796125 ( 38) TCCTTTCCTATTTCG 1 chrXIII:30187-30690 ( 61) CACTTTCTTATTTTG 1 chrIV:472662-473386 ( 30) CTTTTTGTTTTCTTT 1 chrXIV:576660-577670 ( 78) TAGTTTCTTTTATTG 1 chrV:550851-551591 ( 42) TCATTTTTTATTTTT 1 chrXII:533974-535901 ( 72) TTTTCTGTTATTTTG 1 chrXV:1003894-1004941 ( 31) AATTTTTCTTCTTCT 1 chrXI:313035-314012 ( 57) CTCTTTGCTTTTTTC 1 chrXV:571746-572340 ( 39) TTTTTTGCTAATTTG 1 chrV:60987-62165 ( 48) TATTTTTCTTAATCC 1 chrIV:980701-981150 ( 22) TATTCTTTTTTATCG 1 chrXII:214576-215063 ( 84) TATTCTCCTTTATTT 1 chrXIII:625836-627311 ( 80) TTGTATTTTATTTTT 1 chrII:44957-45342 ( 17) TCTTTTTCCTAATTT 1 chrXV:353905-354305 ( 69) TATTTTGTTGTTTCT 1 chrIX:370226-370611 ( 24) TATTTTTTCTACTTC 1 chrXV:409227-409971 ( 52) ATTTTTCTTATTTCT 1 chrXII:366046-366557 ( 85) TATTTCGTTTTTTTT 1 chrXIV:351587-352939 ( 21) TGTTCTTTTTCCTCT 1 chrVI:101162-102044 ( 2) TTTTTTTTTACTTAC 1 chrXIV:560171-561012 ( 51) TGATTTCTTTTTTTT 1 chrXVI:559949-560496 ( 7) TATTTTTGTATTTTT 1 chrX:606087-606187 ( 37) TAGTTTTCTATATCG 1 chrX:662748-662848 ( 14) TAGTTTGTTACATCT 1 chrXV:259295-259985 ( 8) CTTTATTTTTTTTCT 1 chrXIII:872630-873053 ( 77) TAATTTTTCACTTTT 1 chrIV:1384575-1385115 ( 26) TACTTTTTATTTTCT 1 chrXVI:376900-377390 ( 70) TTATTTTTCTTTTTG 1 chrXI:513033-513602 ( 44) TATTTTGCTTTTTAT 1 chrVII:531385-532018 ( 48) TGCTATCTTATTTTT 1 chrXIII:162950-164381 ( 60) TATTATGTTTCTTTC 1 chrIV:125322-126110 ( 86) TGCTTTTTTGTTTCG 1 chrVII:541723-542167 ( 31) CTTTTTCTTACCTCT 1 chrIV:465200-465564 ( 84) CCGTTTTCTATTTTC 1 chrXV:92030-94748 ( 15) TACTTTTTTATTGTT 1 chrIX:210663-211470 ( 66) AACTCTTTTATTTTT 1 chrVII:554822-557543 ( 9) TTTTCTTCTATCTCC 1 chrVII:422898-423575 ( 21) TATTTTTTTCCATTT 1 chrX:196223-196323 ( 33) TCTTCTTCTTCATCG 1 chrXV:32078-32253 ( 39) TATTTTTCTTTATAC 1 chrVIII:113825-116394 ( 82) TATTTTTTAATATTT 1 chrVI:53108-55722 ( 83) TTCTTCTTTTATTTG 1 chrXV:234213-234838 ( 44) CGCTTTTTCACATCT 1 chrII:555817-556043 ( 35) TTGTTTGTTTACTTC 1 chrVIII:296971-297143 ( 75) CATTTCTTTACTTTT 1 chrIV:1245613-1246169 ( 38) TGTTATTTCATATTT 1 chrXII:241689-243535 ( 42) TTTTCTTCCATATCC 1 chrXVI:927764-928169 ( 5) CGTTTTTCCTATTTG 1 chrXI:567194-567471 ( 24) TCCTTTCCTAAATTG 1 chrXI:558574-559497 ( 5) TACTTTGTTATATAT 1 chrVI:180678-181233 ( 15) TTGTCTGTTATATTC 1 chrIII:57317-60851 ( 56) TATTATTCCTCCTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWYTTTTTTWTTTTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 51600 bayes= 9.98691 E= 3.4e-038 -247 -89 -1362 145 21 -59 -69 36 -328 62 -79 87 -1362 -1362 -1362 170 -247 -101 -1362 146 -1362 -301 -1362 166 -1362 -20 -42 116 -1362 49 -459 123 -428 16 -1362 132 36 -459 -301 89 -96 45 -1362 91 -37 -89 -1362 110 -1362 -1362 -459 169 -328 54 -1362 116 -1362 5 -13 102 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWYTTTTTTWTTTTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 126 E= 3.4e-038 0.055556 0.103175 0.000000 0.841270 0.357143 0.126984 0.119048 0.396825 0.031746 0.293651 0.111111 0.563492 0.000000 0.000000 0.000000 1.000000 0.055556 0.095238 0.000000 0.849206 0.000000 0.023810 0.000000 0.976190 0.000000 0.166667 0.142857 0.690476 0.000000 0.269841 0.007937 0.722222 0.015873 0.214286 0.000000 0.769841 0.396825 0.007937 0.023810 0.571429 0.158730 0.261905 0.000000 0.579365 0.238095 0.103175 0.000000 0.658730 0.000000 0.000000 0.007937 0.992063 0.031746 0.277778 0.000000 0.690476 0.000000 0.198413 0.174603 0.626984 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWYTTTTTTWTTTTT MEME-3 regular expression -------------------------------------------------------------------------------- T[TA][TC]TTTT[TC][TC][TA][TC][TA]T[TC]T -------------------------------------------------------------------------------- Time 978.63 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:373080-375684 6.28e-01 100 chrVIII:302320-303318 6.09e-01 100 chrXIV:725664-726391 9.52e-01 100 chrVII:254152-254811 9.52e-01 100 chrXI:490773-491267 3.22e-12 3_[+2(7.84e-09)]_17_[+1(7.28e-09)]_\ 1_[+3(2.47e-05)]_15 chrI:171113-172239 6.17e-01 100 chrIV:1362063-1362830 5.05e-01 100 chrXVI:810582-811830 7.76e-01 100 chrXIII:625836-627311 5.29e-02 79_[+3(4.73e-05)]_6 chrVII:541723-542167 7.25e-02 30_[+3(8.39e-05)]_55 chrVII:405469-405898 8.59e-01 100 chrXI:612597-613024 2.25e-02 34_[+1(6.18e-05)]_37 chrIV:749912-751360 8.66e-01 100 chrIII:137749-139349 4.09e-01 100 chrXVI:376900-377390 9.09e-02 69_[+3(6.61e-05)]_16 chrIV:1095076-1095670 1.33e-06 47_[-1(1.03e-09)]_24 chrXII:214576-215063 8.69e-02 83_[-3(4.73e-05)]_2 chrIX:325748-326372 9.03e-01 100 chrXIV:499106-502804 8.95e-01 100 chrIV:980701-981150 1.27e-01 21_[+3(4.33e-05)]_64 chrXII:628180-628989 4.83e-01 100 chrIX:321541-324375 5.99e-03 30_[-3(2.55e-06)]_55 chrII:299627-300293 9.82e-01 100 chrXII:92310-92970 9.35e-11 30_[+1(5.44e-12)]_3_[+3(3.04e-06)]_\ 23 chrXVI:75340-77290 2.36e-01 100 chrVII:412062-412595 5.67e-11 16_[-1(1.59e-10)]_18_[-2(7.18e-08)]_\ 17 chrXV:671149-671818 6.31e-01 100 chrXII:366046-366557 2.75e-02 84_[+3(5.61e-05)]_1 chrVII:823339-823729 7.60e-11 3_[+2(7.18e-08)]_18_[+1(1.59e-10)]_\ 30 chrXV:779725-781018 2.79e-01 100 chrXIII:168227-169382 6.73e-03 46_[+2(9.46e-07)]_34 chrV:207355-208214 4.00e-01 100 chrXVI:572181-573377 4.63e-02 [-3(1.28e-05)]_85 chrII:555817-556043 1.46e-01 100 chrIV:769516-771009 2.09e-02 3_[-3(3.61e-06)]_82 chrXV:593923-594125 1.12e-01 100 chrIV:913960-916292 9.46e-01 100 chrXIII:752981-754295 8.10e-01 100 chrVII:121902-122971 4.93e-01 100 chrXII:809782-815791 8.42e-01 100 chrVIII:358283-358762 2.65e-09 6_[-1(4.05e-09)]_36_[-2(1.20e-07)]_\ 9 chrX:622135-622235 2.32e-01 100 chrVII:362324-364460 1.61e-01 100 chrVIII:487472-488226 4.81e-02 100 chrXII:962815-963316 2.75e-06 14_[-2(1.54e-08)]_66 chrXIII:267421-268333 9.37e-01 100 chrXIV:104600-105280 2.83e-01 100 chrXIV:602085-602575 6.76e-06 37_[+2(1.02e-09)]_43 chrVII:422898-423575 8.08e-02 100 chrXVI:768592-769478 1.76e-02 82_[+3(4.97e-06)]_3 chrXIII:145832-146242 1.59e-02 17_[+3(7.68e-06)]_68 chrIX:68279-68480 3.19e-02 44_[+3(1.13e-05)]_41 chrXV:504905-505479 5.84e-01 100 chrXIII:253326-253615 9.24e-01 100 chrVII:876180-879025 4.56e-01 100 chrXII:241689-243535 2.65e-01 100 chrX:453336-453436 5.69e-01 100 chrVII:56432-59230 5.53e-01 100 chrXVI:280527-281861 2.59e-01 100 chrVI:167251-167729 8.99e-10 2_[+2(9.46e-07)]_33_[+1(3.06e-08)]_\ 1_[+3(2.00e-05)] chrXI:567194-567471 5.66e-02 100 chrXII:932109-932490 3.10e-01 100 chrXII:299871-301470 7.67e-01 100 chrXI:202321-203227 3.95e-02 100 chrV:298863-302090 1.09e-01 100 chrIV:1012745-1013923 1.54e-02 79_[-3(2.55e-06)]_6 chrVII:277035-278730 2.08e-01 100 chrXIII:352073-353603 7.15e-01 100 chrXIV:61442-64556 8.14e-01 100 chrXIII:131623-132109 1.79e-08 9_[-1(2.61e-09)]_16_[-2(3.02e-06)]_\ 26 chrXII:710482-711585 2.98e-01 100 chrVIII:54206-54678 7.89e-03 4_[+3(4.97e-06)]_81 chrXI:307893-308434 1.89e-11 31_[-1(1.59e-10)]_18_[-2(7.18e-08)]_\ 2 chrXII:231922-234261 6.16e-01 100 chrXIII:23935-25996 7.40e-01 100 chrIII:107054-107849 3.07e-02 60_[-3(1.44e-05)]_25 chrV:354677-355361 6.21e-07 6_[+1(5.60e-11)]_65 chrXII:636683-640337 7.05e-02 26_[-2(8.43e-05)]_54 chrIV:1175747-1176114 2.29e-02 37_[+3(4.97e-06)]_48 chrXII:406819-407581 4.43e-01 100 chrVII:287149-287779 1.07e-03 15_[-2(1.75e-06)]_65 chrXVI:435653-436195 1.44e-10 19_[-1(1.51e-09)]_16_[-2(5.55e-07)]_\ 16 chrVI:106543-106873 5.45e-03 8_[-3(8.76e-06)]_77 chrXIV:585403-586769 3.86e-01 100 chrVII:786760-788729 2.03e-01 100 chrXII:605133-605613 9.93e-01 100 chrII:80953-84151 1.26e-01 100 chrXII:1017747-1019544 3.51e-01 100 chrXV:903639-904656 1.95e-03 41_[-3(7.09e-07)]_44 chrVIII:113825-116394 1.27e-01 100 chrVII:120734-121262 2.88e-04 79_[-3(7.09e-07)]_6 chrIII:149715-150190 5.25e-08 23_[+2(1.33e-07)]_16_[+1(6.82e-08)]_\ 12 chrXV:1003894-1004941 1.03e-01 30_[+3(3.96e-05)]_55 chrIV:340190-341602 6.90e-01 100 chrXV:109884-111486 6.00e-03 36_[+3(1.13e-05)]_1_[-3(7.09e-07)]_\ 33 chrVII:700406-701259 9.15e-01 100 chrXVI:209944-210497 2.71e-08 22_[-1(5.60e-11)]_49 chrXII:713060-713701 7.83e-01 100 chrXVI:794543-796226 5.08e-01 100 chrVIII:475472-475896 3.48e-01 100 chrV:545586-546602 2.49e-01 100 chrIII:142067-142960 3.36e-03 82_[+3(5.77e-06)]_3 chrXVI:577083-581218 7.22e-01 100 chrXIII:91773-92120 7.68e-02 13_[-3(2.00e-05)]_72 chrXII:533974-535901 4.12e-02 71_[+3(3.96e-05)]_14 chrXVI:749712-753058 7.17e-01 100 chrVIII:103721-105496 7.23e-02 21_[+3(2.23e-05)]_64 chrXVI:880023-880580 6.12e-09 25_[-3(1.28e-05)]_5_[-1(8.00e-11)]_\ 26 chrXIII:123011-124227 2.71e-01 100 chrXV:32078-32253 3.81e-02 100 chrXIII:162950-164381 1.35e-01 59_[-3(7.76e-05)]_26 chrIX:96792-97618 3.27e-01 100 chrV:510215-512305 1.29e-01 100 chrVI:222691-225293 1.42e-02 53_[-3(3.61e-06)]_32 chrV:60987-62165 2.84e-02 14_[+3(5.61e-05)]_18_[-3(4.33e-05)]_\ 38 chrXVI:927764-928169 1.70e-01 100 chrXV:464293-464781 3.13e-08 34_[+1(5.44e-12)]_37 chrXII:1028813-1030313 1.11e-02 59_[-3(3.29e-05)]_26 chrIII:846-1052 6.80e-01 100 chrXV:377826-379606 3.45e-01 100 chrVII:702786-704344 3.03e-01 100 chrXIII:586372-586910 1.16e-06 45_[-1(1.59e-10)]_26 chrVIII:225384-226972 3.52e-01 100 chrIV:619734-620188 6.32e-06 58_[-1(7.28e-09)]_13 chrV:396053-398091 6.33e-01 100 chrII:9471-10169 8.52e-01 100 chrXV:979728-981324 1.00e+00 100 chrII:477097-477773 1.89e-02 53_[+2(2.34e-05)]_27 chrXV:832212-833430 7.93e-03 53_[+1(3.81e-05)]_18 chrX:607922-608022 9.15e-01 100 chrVII:640258-642104 6.56e-01 100 chrX:517648-517748 5.42e-08 3_[-1(6.82e-08)]_16_[-2(1.33e-07)]_\ 32 chrXII:728740-730623 3.98e-01 100 chrXII:448502-448949 1.80e-04 20_[-2(1.78e-05)]_45_[+3(7.68e-06)] chrII:680290-682104 2.58e-01 100 chrI:182177-183145 4.81e-01 100 chrXIV:374693-375136 2.34e-10 10_[+2(1.20e-07)]_35_[+1(1.03e-09)]_\ 6 chrIV:1245613-1246169 2.34e-01 100 chrVII:545102-546060 7.08e-03 8_[+3(1.44e-05)]_77 chrII:236470-237401 2.60e-01 100 chrXI:551578-552684 8.64e-01 100 chrV:266228-268266 6.47e-01 100 chrXII:209988-212395 3.32e-01 100 chrXV:594306-594677 6.56e-01 100 chrII:87904-88598 2.65e-01 100 chrIV:884252-884677 9.59e-08 49_[+1(1.82e-09)]_3_[+3(9.99e-06)]_\ 4 chrVII:483292-483792 4.18e-01 100 chrII:392590-398224 1.30e-01 100 chrXI:219670-220119 1.27e-05 56_[+2(1.70e-09)]_24 chrVIII:34379-36182 8.22e-02 100 chrXIII:873751-874042 7.42e-01 100 chrVII:951336-951741 7.95e-02 100 chrXIII:480394-480831 2.76e-08 59_[-1(1.08e-11)]_12 chrIV:568710-569282 1.27e-10 5_[+3(2.47e-05)]_3_[+2(2.55e-05)]_\ 16_[+1(1.13e-10)]_12 chrVIII:296971-297143 6.14e-02 100 chrV:249791-250557 1.58e-02 26_[-1(3.70e-05)]_45 chrVII:575744-578162 6.41e-01 100 chrX:119853-119953 4.16e-02 100 chrIV:359359-359870 2.37e-04 18_[+2(1.76e-08)]_62 chrXII:644462-645436 3.01e-01 100 chrVIII:74802-76321 2.15e-01 100 chrII:611901-614145 2.15e-01 100 chrVI:63899-65368 6.18e-01 100 chrVII:288732-290328 1.27e-01 100 chrIV:1401312-1403522 9.54e-01 100 chrXII:568448-571047 7.61e-01 100 chrIV:117186-118227 5.65e-01 100 chrVIII:119599-121940 2.44e-01 100 chrX:596895-596995 7.01e-02 100 chrIV:667796-668246 9.12e-09 16_[-3(1.62e-05)]_5_[-1(8.00e-11)]_\ 35 chrX:227687-227787 5.79e-01 100 chrXV:87387-88630 8.75e-01 100 chrXI:571109-571450 5.85e-02 84_[+3(2.00e-05)]_1 chrXIV:68002-68780 3.63e-01 100 chrIV:433543-433757 9.62e-01 100 chrXIV:529185-530381 2.23e-02 3_[-3(4.97e-06)]_82 chrX:424098-424198 7.19e-01 100 chrIV:1236384-1238562 6.43e-01 100 chrX:390804-390904 2.23e-04 41_[-2(9.85e-08)]_39 chrV:550851-551591 9.44e-02 41_[+3(3.96e-05)]_44 chrXII:1002264-1003370 2.36e-01 100 chrXVI:822746-824296 5.26e-01 100 chrV:431023-431913 6.35e-01 100 chrVIII:125938-126298 2.45e-03 80_[+3(3.21e-07)]_5 chrIV:519661-520074 3.34e-04 46_[+3(7.17e-05)]_21_[+3(2.13e-08)]_\ 3 chrII:413827-415348 6.68e-01 100 chrXI:162226-162759 1.83e-05 45_[-1(2.61e-09)]_26 chrXV:28382-31888 4.75e-01 100 chrIX:315843-318576 3.19e-01 100 chrXII:721772-722411 8.57e-01 100 chrXII:656824-657218 7.74e-06 9_[-2(1.70e-09)]_71 chrVII:806049-807803 2.27e-01 100 chrXII:855403-857585 2.33e-01 100 chrIII:78413-79263 5.32e-02 12_[+3(1.80e-05)]_73 chrXVI:55852-56430 3.50e-02 100 chrIV:43986-44543 3.82e-01 100 chrXIV:715439-717081 1.99e-02 10_[-3(9.99e-06)]_17_[+3(3.61e-06)]_\ 43 chrX:542765-542865 5.80e-04 55_[-2(9.46e-07)]_25 chrVIII:134113-134695 1.47e-06 8_[+1(1.01e-10)]_63 chrX:378218-378318 6.11e-12 15_[+2(7.18e-08)]_18_[+1(1.59e-10)]_\ 18 chrXIV:745753-746168 7.81e-01 100 chrXIII:763361-763671 9.44e-01 100 chrXIII:158583-160245 6.65e-01 100 chrXIV:442785-444765 4.50e-01 100 chrIV:1328864-1330994 2.51e-01 100 chrII:88900-89529 6.72e-02 30_[+3(2.47e-05)]_55 chrV:460488-461744 7.59e-02 100 chrX:290016-290116 9.47e-01 100 chrII:36248-36883 1.96e-01 100 chrXIV:525072-525314 7.18e-01 100 chrIV:308023-310182 9.75e-01 100 chrII:603648-607559 6.33e-03 24_[+3(9.99e-06)]_61 chrXVI:377876-378487 9.02e-01 100 chrXII:515284-516828 6.98e-01 100 chrXV:234213-234838 2.91e-02 100 chrXII:975820-976197 4.61e-10 25_[-1(5.23e-09)]_18_[-2(3.25e-08)]_\ 8 chrXII:951032-953764 1.44e-01 100 chrXVI:302692-304247 6.73e-01 100 chrIV:1269876-1271049 4.30e-01 100 chrXV:228076-228577 1.33e-04 60_[+2(3.25e-08)]_20 chrXIII:557395-558585 4.72e-01 100 chrXI:100302-110693 5.22e-01 100 chrXVI:581851-582342 2.29e-12 21_[+2(2.89e-08)]_17_[+1(1.08e-11)]_\ 13 chrXV:988775-989406 8.18e-01 100 chrIX:210663-211470 4.24e-02 65_[+3(9.06e-05)]_20 chrXIII:754456-755269 5.99e-01 100 chrVI:82204-84407 9.75e-02 100 chrXII:783937-784528 2.12e-01 100 chrIV:433922-434881 8.83e-01 100 chrXIII:18985-20539 7.33e-01 100 chrVII:401351-401616 1.28e-02 33_[-3(3.61e-06)]_52 chrXV:866384-868152 7.00e-01 100 chrVII:452964-456003 7.69e-01 100 chrXV:722805-725748 7.74e-01 100 chrXII:374204-374762 7.21e-01 100 chrVI:53108-55722 1.29e-01 100 chrXIII:222192-223913 1.92e-01 100 chrVII:319226-320111 2.79e-01 100 chrXIII:362942-363812 9.55e-01 100 chrXIII:886698-889410 6.13e-01 100 chrXI:558574-559497 1.11e-01 100 chrXII:47185-49092 8.22e-01 100 chrV:66901-69485 7.48e-01 100 chrVI:220130-221535 4.57e-01 100 chrXV:340134-340586 2.76e-05 35_[-2(7.84e-09)]_45 chrVII:115325-115762 1.38e-10 [+2(1.76e-08)]_40_[+1(7.68e-10)]_11 chrXVI:744067-744595 3.40e-08 8_[+2(9.46e-07)]_16_[+1(1.99e-08)]_\ 27 chrVIII:62607-63268 9.09e-01 100 chrXV:444601-446583 2.52e-01 100 chrX:540694-540794 1.50e-06 26_[+1(1.13e-10)]_45 chrXI:302681-303231 1.41e-03 17_[+2(1.75e-06)]_63 chrXI:630523-630834 2.27e-02 [+3(6.67e-06)]_85 chrXII:592346-592810 7.47e-06 65_[-2(2.75e-09)]_15 chrXII:1051910-1052219 5.93e-09 40_[-3(1.13e-05)]_2_[-1(8.00e-11)]_\ 14 chrXII:919167-924139 8.84e-02 100 chrIV:1449889-1451456 8.16e-01 100 chrXVI:718323-719657 9.86e-01 100 chrXVI:282032-283252 3.28e-03 56_[+3(4.33e-07)]_29 chrXI:431799-433061 2.33e-01 100 chrXIII:67418-68058 2.25e-01 100 chrXV:409227-409971 1.63e-02 51_[-3(5.16e-05)]_34 chrV:27604-29926 7.80e-01 100 chrV:441798-442637 9.58e-01 100 chrXV:1027847-1029274 9.66e-01 100 chrXIII:91408-91587 8.91e-01 100 chrVII:554822-557543 9.82e-02 8_[-3(9.77e-05)]_77 chrIV:555421-556668 9.33e-02 100 chrXIII:549872-553268 9.92e-01 100 chrXIV:412838-413304 7.73e-01 100 chrXVI:585979-586296 4.25e-01 100 chrXI:617634-619368 3.51e-01 100 chrXII:805704-807163 4.72e-01 100 chrIX:68646-69776 3.45e-02 100 chrVIII:148976-149461 7.63e-01 100 chrXVI:39267-40610 3.21e-01 100 chrIII:151034-151502 2.26e-10 35_[+3(7.68e-06)]_16_[-1(1.08e-11)]_\ 5 chrVII:531385-532018 2.64e-08 [+1(1.13e-10)]_18_[-3(7.76e-05)]_38 chrXIII:808017-808540 1.96e-09 18_[-1(8.99e-11)]_16_[-2(1.78e-05)]_\ 17 chrXIII:290572-291148 3.05e-07 32_[+1(5.60e-11)]_39 chrIII:127539-127901 6.49e-05 51_[+2(3.25e-08)]_29 chrXIV:102578-103503 1.37e-01 100 chrXIV:653885-661878 6.13e-01 100 chrIV:129134-130958 5.24e-01 100 chrIV:1384575-1385115 1.09e-01 25_[+3(6.61e-05)]_60 chrIII:295311-295924 6.45e-01 100 chrVII:436992-438461 3.73e-01 100 chrVIII:492013-493667 5.49e-01 100 chrV:53548-54046 7.39e-01 100 chrII:168368-169674 4.72e-01 100 chrXII:498485-500091 4.28e-01 100 chrVII:959841-961586 5.38e-01 100 chrVII:316747-317418 6.09e-01 100 chrX:662748-662848 1.63e-02 13_[+3(6.09e-05)]_72 chrVII:147959-149503 7.29e-01 100 chrIV:465735-467411 5.26e-01 100 chrXII:947217-948309 6.47e-01 100 chrXII:731393-732324 4.63e-01 100 chrXV:564545-566145 9.03e-01 100 chrXV:407582-408283 3.88e-01 100 chrXIV:720371-723201 2.15e-02 48_[-3(1.44e-05)]_37 chrXV:978788-979186 5.20e-01 100 chrIV:1354422-1355983 5.90e-01 100 chrIV:795759-796125 8.79e-03 37_[+3(3.62e-05)]_48 chrVII:516231-518347 2.62e-01 100 chrIV:491445-493184 3.03e-01 100 chrXI:42480-47004 6.04e-01 100 chrIV:1162559-1164685 1.61e-01 100 chrX:617718-617818 7.47e-06 18_[+2(2.75e-09)]_62 chrXIII:320971-321317 7.62e-07 53_[-1(1.66e-09)]_18 chrX:414727-414827 1.41e-09 36_[+1(1.08e-11)]_35 chrXIII:195934-196301 5.70e-11 1_[-1(5.44e-12)]_47_[-2(1.64e-06)]_\ 3 chrVII:736168-737117 5.20e-02 5_[+3(3.62e-05)]_80 chrXVI:66909-67514 6.45e-01 100 chrXIII:161855-162691 1.05e-01 100 chrXIV:505957-506772 7.96e-01 100 chrXIII:731812-733590 7.96e-01 100 chrIX:231218-233364 4.25e-01 100 chrIX:257390-258172 1.43e-01 100 chrXI:457995-459261 6.89e-01 100 chrXIV:215088-215910 3.90e-01 100 chrIV:720595-721652 9.54e-01 100 chrVII:667343-668184 3.54e-01 100 chrIV:1239360-1240669 4.58e-03 27_[+3(4.25e-06)]_58 chrV:221443-222182 1.42e-02 52_[-3(4.25e-06)]_33 chrXVI:188130-188916 3.94e-01 100 chrVIII:385142-386946 5.78e-01 100 chrXI:158241-159867 5.83e-01 100 chrIV:411311-411613 4.15e-02 46_[-2(3.64e-05)]_34 chrIX:215938-216393 7.14e-01 100 chrIX:300078-300492 1.87e-04 39_[-2(2.89e-08)]_41 chrXIV:576660-577670 1.21e-01 77_[-3(3.96e-05)]_8 chrXIV:65330-66499 4.15e-01 100 chrIV:1251510-1252071 5.23e-01 100 chrX:348839-348939 4.04e-01 100 chrXV:448903-449346 2.62e-01 100 chrX:396393-396493 3.60e-01 100 chrV:434383-435128 3.95e-02 100 chrXV:796677-798883 3.36e-01 100 chrXII:348011-348781 9.35e-01 100 chrV:305827-307695 1.16e-01 100 chrXIII:378781-379622 7.08e-01 100 chrIV:409985-410792 1.03e-05 46_[+2(1.70e-09)]_34 chrVII:310383-312462 3.67e-01 100 chrXIII:225290-225670 1.99e-02 26_[+3(8.76e-06)]_59 chrV:362649-363323 5.46e-01 100 chrXV:281962-282521 2.80e-11 13_[+1(1.27e-13)]_32_[+3(2.72e-05)]_\ 11 chrXVI:642009-643614 6.84e-01 100 chrX:531583-531683 5.93e-13 3_[+1(1.27e-13)]_3_[+3(3.21e-07)]_\ 50 chrII:311162-313115 8.89e-01 100 chrXIV:234271-235736 2.05e-01 100 chrIV:802557-803006 4.19e-09 [-1(1.01e-10)]_16_[-2(1.78e-05)]_35 chrVIII:400541-402033 3.82e-01 100 chrVII:533615-535172 8.99e-01 100 chrV:487087-487584 3.68e-07 46_[-1(5.60e-11)]_25 chrXV:505683-507075 1.71e-01 100 chrIV:946143-946643 9.50e-05 27_[+1(3.06e-08)]_44 chrV:363612-364078 5.98e-01 100 chrX:538037-538137 4.18e-01 100 chrXVI:730788-731323 2.07e-01 100 chrIX:197366-197824 7.35e-01 100 chrXII:796989-797554 9.95e-03 38_[+3(7.68e-06)]_47 chrVIII:237746-238131 2.35e-04 25_[-2(1.20e-07)]_55 chrXV:226432-226915 2.37e-03 32_[-2(6.00e-07)]_48 chrVI:191095-191850 4.29e-03 72_[-3(1.44e-05)]_13 chrIV:579063-580783 2.40e-01 100 chrVII:648741-649354 4.57e-01 100 chrXVI:786086-787689 7.41e-01 100 chrII:255038-257818 9.83e-01 100 chrXIV:568059-568545 1.25e-02 11_[+3(9.06e-05)]_31_[-3(1.74e-06)]_\ 28 chrXV:1015204-1017888 9.60e-01 100 chrIII:123347-123807 7.83e-10 50_[-1(1.97e-14)]_21 chrX:606087-606187 4.61e-02 36_[-3(6.09e-05)]_49 chrIV:1352062-1353052 3.73e-04 5_[-2(2.89e-08)]_75 chrIII:81885-82659 1.39e-03 47_[-3(2.47e-05)]_38 chrV:322028-323221 4.73e-01 100 chrII:642843-643250 5.19e-09 11_[-1(1.51e-09)]_16_[-2(5.55e-07)]_\ 24 chrXI:93581-95169 3.03e-02 29_[-3(8.76e-06)]_56 chrXIV:662927-665027 8.72e-01 100 chrX:156215-156315 2.45e-01 100 chrI:142130-143705 4.17e-01 100 chrXII:1028240-1028529 1.58e-02 1_[+3(7.68e-06)]_84 chrXI:261060-262642 2.36e-01 100 chrIV:331004-333335 3.23e-02 100 chrXI:143219-144302 5.19e-01 100 chrXV:899821-901273 2.29e-01 100 chrVII:726903-728654 7.59e-01 100 chrIV:1080511-1080931 2.93e-01 100 chrII:326490-327072 8.49e-09 38_[-3(1.28e-05)]_8_[-1(1.01e-10)]_\ 10 chrIV:1488976-1490720 7.16e-01 100 chrVII:706721-707181 6.29e-01 100 chrVII:779422-779922 9.78e-09 35_[+1(3.39e-10)]_5_[+3(4.25e-06)]_\ 16 chrIX:394828-395295 9.70e-01 100 chrX:701770-701870 1.53e-02 68_[-3(4.97e-06)]_17 chrIV:221033-222333 3.26e-01 100 chrXI:578714-579400 2.25e-06 23_[+1(7.68e-10)]_48 chrXII:445072-447502 6.31e-01 100 chrVIII:410999-411693 9.46e-01 100 chrXIV:546441-547671 4.19e-01 100 chrII:165111-165443 4.83e-01 100 chrIX:127400-130288 3.70e-01 100 chrXIII:872630-873053 3.29e-02 76_[-3(6.61e-05)]_9 chrXVI:559949-560496 2.65e-07 6_[-3(6.09e-05)]_5_[-1(4.05e-09)]_\ 45 chrIII:28720-31187 7.78e-01 100 chrV:141084-141315 1.54e-02 9_[+3(6.67e-06)]_76 chrXIII:837756-838208 2.52e-11 1_[+2(9.46e-07)]_33_[+1(3.06e-08)]_\ 1_[+3(4.33e-07)]_1 chrV:135240-136031 4.53e-01 100 chrI:138990-139368 4.38e-04 28_[+2(1.64e-06)]_52 chrV:101817-102674 7.61e-01 100 chrXIV:413515-417324 8.72e-01 100 chrXVI:310204-312806 2.98e-01 100 chrXI:38553-39259 7.14e-01 100 chrXV:216298-216686 3.74e-01 100 chrIV:229599-230853 4.72e-01 100 chrVII:648007-648510 6.85e-01 100 chrXI:430590-431240 5.14e-02 100 chrXIII:759441-763166 9.50e-01 100 chrV:269182-270212 3.75e-01 100 chrXIV:229583-230973 4.37e-01 100 chrXII:260958-264606 9.83e-01 100 chrII:644976-645423 6.54e-07 59_[+1(5.60e-11)]_12 chrV:51766-53299 4.97e-01 100 chrXVI:775614-776033 1.36e-03 37_[-2(5.55e-07)]_43 chrVI:157899-158262 8.85e-01 100 chrXIV:771936-772353 7.22e-02 100 chrIV:1465727-1468473 5.58e-01 100 chrXIII:510912-512070 3.66e-01 100 chrX:181108-181208 4.87e-02 100 chrXIII:463324-463880 1.29e-08 7_[+2(2.55e-05)]_16_[+1(1.13e-10)]_\ 28 chrIX:83331-84156 8.37e-01 100 chrV:491089-491984 6.99e-01 100 chrXII:329457-329936 2.47e-01 100 chrIV:1305448-1305891 1.27e-07 16_[+2(4.86e-10)]_64 chrVII:730940-731570 2.41e-02 58_[+3(6.67e-06)]_27 chrXVI:136363-136718 2.98e-01 100 chrIV:1201527-1202009 1.17e-04 37_[+2(2.89e-08)]_43 chrXII:730935-731214 7.10e-02 100 chrII:59507-61263 8.46e-01 100 chrXIII:861152-861432 4.53e-01 100 chrXII:1011675-1012597 1.19e-02 14_[+3(2.23e-05)]_48_[-3(8.76e-06)]_\ 8 chrXVI:856727-857197 1.42e-05 32_[+1(1.66e-09)]_39 chrIV:437549-438159 4.67e-02 100 chrXV:259295-259985 8.25e-02 7_[+3(6.61e-05)]_78 chrIV:757515-758179 3.09e-01 100 chrII:405693-406275 1.27e-10 13_[+3(2.47e-05)]_3_[+2(2.55e-05)]_\ 16_[+1(1.13e-10)]_4 chrXIII:507008-509180 4.35e-01 100 chrXVI:860174-860702 2.26e-10 31_[+1(1.27e-13)]_40 chrXIV:493512-495795 8.90e-01 100 chrII:556240-558485 6.36e-01 100 chrXV:677779-681005 3.32e-01 100 chrXIII:789121-789807 2.96e-01 100 chrXIV:560171-561012 8.89e-02 50_[-3(6.09e-05)]_35 chrXV:92030-94748 1.05e-01 14_[-3(9.06e-05)]_71 chrXII:780521-781834 2.61e-01 100 chrIV:1150736-1151159 1.25e-07 18_[-2(6.52e-11)]_62 chrIV:83351-83841 5.94e-16 7_[+2(6.00e-07)]_15_[+1(1.27e-13)]_\ 8_[+3(2.12e-06)]_6 chrIX:370226-370611 6.69e-02 23_[-3(5.16e-05)]_62 chrXV:571746-572340 1.79e-08 6_[+1(1.13e-10)]_3_[+3(4.33e-05)]_\ 47 chrI:166173-166612 9.97e-01 100 chrXIV:241466-241725 9.00e-01 100 chrVII:845440-846105 9.13e-01 100 chrXV:882159-882484 9.10e-01 100 chrXIV:331249-332503 9.62e-01 100 chrXII:426930-427436 1.56e-08 4_[+2(2.55e-05)]_16_[+1(1.13e-10)]_\ 31 chrX:745066-745166 2.40e-01 100 chrXV:778083-779493 4.14e-01 100 chrV:492192-492571 2.24e-10 21_[-1(7.28e-09)]_17_[-2(7.84e-09)]_\ 13 chrIX:45575-47162 5.60e-01 100 chrVII:364863-366732 5.51e-01 100 chrX:196223-196323 1.49e-01 100 chrV:422778-425473 8.98e-01 100 chrIV:489625-491221 4.35e-01 100 chrII:504538-504864 6.12e-01 100 chrXII:875040-876537 9.89e-01 100 chrIV:322156-323631 3.21e-01 100 chrXV:854025-854729 8.90e-01 100 chrV:281831-284111 6.29e-02 19_[+2(5.71e-05)]_61 chrXI:333923-335033 9.68e-01 100 chrV:85135-87446 2.12e-02 54_[+3(3.61e-06)]_6_[+3(6.61e-05)]_\ 10 chrXI:163288-164532 7.89e-01 100 chrIX:254250-254501 9.77e-01 100 chrVIII:144113-146468 7.38e-01 100 chrXV:113590-113881 4.68e-01 100 chrIX:174870-175397 2.48e-01 100 chrXII:809280-809601 2.49e-01 100 chrVII:738900-739580 4.37e-01 100 chrVII:227296-228398 7.92e-01 100 chrXI:84008-84453 4.92e-05 33_[+2(1.54e-08)]_47 chrXII:930316-931880 3.14e-01 100 chrXIV:575103-576203 3.44e-02 9_[-3(1.80e-05)]_76 chrXVI:432490-434298 6.42e-01 100 chrX:73402-73502 3.12e-01 100 chrXII:368681-372800 4.20e-01 100 chrXIII:420313-420864 8.06e-07 50_[-1(1.59e-10)]_21 chrIV:125322-126110 3.97e-02 85_[-3(8.39e-05)] chrIV:1075281-1075759 2.36e-09 2_[-1(3.08e-12)]_69 chrVIII:388661-389003 1.81e-01 100 chrIV:1301553-1302561 7.20e-01 100 chrXV:252801-253700 8.40e-01 100 chrIV:118416-118923 6.60e-01 100 chrXVI:378682-378998 2.49e-01 100 chrV:438519-438968 4.08e-12 12_[+2(7.18e-08)]_18_[+1(1.59e-10)]_\ 21 chrXVI:519991-520472 2.83e-01 100 chrXI:513033-513602 5.09e-08 43_[-3(7.17e-05)]_7_[-1(1.13e-10)]_\ 6 chrV:138457-140890 5.23e-01 100 chrXIII:372171-372662 1.65e-01 100 chrIX:99663-100110 4.78e-01 100 chrXII:282755-283996 8.43e-01 100 chrIV:600617-602370 3.03e-01 100 chrX:68729-68829 6.70e-01 100 chrV:288155-288741 4.61e-03 32_[-3(2.99e-05)]_53 chrIV:305991-307847 7.49e-01 100 chrXIV:783920-784318 5.19e-01 100 chrVII:1004037-1004436 4.75e-08 35_[+2(9.46e-07)]_16_[+1(1.99e-08)] chrXIII:661701-662038 6.86e-01 100 chrVIII:562389-562583 9.58e-01 100 chrVIII:85101-85360 9.39e-01 100 chrXVI:172906-174135 7.03e-02 80_[+3(3.62e-05)]_5 chrXII:402326-403814 3.36e-01 100 chrXV:976383-976850 4.35e-01 100 chrXV:977131-978366 1.86e-01 100 chrXII:253131-253400 4.44e-01 100 chrVII:649595-650731 6.49e-01 100 chrXIII:146429-147612 4.68e-01 100 chrXV:896382-898392 4.80e-01 100 chrX:139066-139166 9.72e-01 100 chrXV:841528-842908 2.62e-01 100 chrIII:57317-60851 1.44e-01 100 chrVII:828342-828972 3.13e-01 100 chrIV:722423-722856 4.73e-01 100 chrIII:129-590 7.73e-02 100 chrX:157500-157600 8.13e-02 100 chrIV:465200-465564 4.61e-02 83_[+3(9.06e-05)]_2 chrXII:459628-460728 4.31e-01 100 chrX:339016-339116 5.52e-01 100 chrXIII:768186-768431 8.76e-01 100 chrIX:255024-257143 7.01e-03 77_[-3(2.55e-06)]_8 chrV:176920-177470 8.94e-01 100 chrV:99876-100337 2.63e-02 100 chrXV:159157-160739 5.06e-02 100 chrIV:1400912-1401109 9.19e-01 100 chrVII:794202-794773 7.92e-07 22_[+1(6.31e-11)]_49 chrV:386112-386791 3.62e-01 100 chrV:311719-312298 8.06e-08 65_[-1(6.31e-11)]_6 chrVIII:505860-506170 4.47e-01 100 chrVII:938997-940175 7.84e-01 100 chrVII:328369-329243 1.98e-01 100 chrX:651850-651950 7.09e-01 100 chrXII:36958-37635 4.60e-01 100 chrXII:167783-168231 3.64e-06 42_[-2(4.86e-10)]_38 chrXI:313035-314012 6.43e-02 56_[+3(4.33e-05)]_29 chrXV:967963-968379 4.62e-01 100 chrVI:180678-181233 2.40e-10 69_[-1(1.27e-13)]_2 chrIV:841962-842684 9.96e-02 100 chrXII:793779-796825 6.88e-01 100 chrIV:354988-357050 4.31e-01 100 chrXII:789429-790047 2.07e-01 100 chrI:68194-68715 5.38e-01 100 chrXII:687668-687908 3.17e-01 100 chrXVI:770696-771176 2.52e-01 100 chrX:172670-172770 8.56e-01 100 chrIV:927767-930396 8.51e-01 100 chrXII:201602-202725 4.64e-01 100 chrXV:353905-354305 1.09e-06 32_[-2(9.02e-09)]_16_[+3(5.16e-05)]_\ 17 chrII:478936-479438 3.86e-01 100 chrVII:197960-199547 8.14e-01 100 chrIII:177062-178826 8.19e-03 77_[+3(4.97e-06)]_8 chrIV:472662-473386 9.06e-02 29_[+3(3.96e-05)]_56 chrI:181132-181452 9.83e-03 13_[+3(2.55e-06)]_72 chrVIII:80186-81651 6.88e-01 100 chrXIV:302595-303812 5.45e-01 100 chrXV:304574-307677 7.29e-02 100 chrXV:253865-255067 2.96e-01 100 chrIV:992726-993347 9.63e-01 100 chrVII:610450-611551 1.86e-01 100 chrXIII:572632-573143 1.78e-05 46_[-1(2.18e-09)]_25 chrXV:438452-439415 2.64e-01 100 chrXIII:499000-500816 7.09e-01 100 chrIV:1243122-1243334 5.15e-01 100 chrII:167487-168203 1.32e-01 23_[-2(9.40e-05)]_57 chrVI:101162-102044 5.34e-02 1_[+3(6.09e-05)]_84 chrVII:400333-400833 2.72e-04 17_[+3(2.13e-08)]_68 chrVII:774140-774750 3.06e-02 26_[+3(2.47e-05)]_59 chrXIII:30187-30690 1.10e-01 60_[-3(3.96e-05)]_25 chrV:406533-409337 2.19e-01 100 chrII:44957-45342 6.16e-02 16_[-3(5.16e-05)]_69 chrXIV:351587-352939 1.37e-01 20_[-3(6.09e-05)]_65 chrX:650714-650814 4.26e-01 100 chrXIV:253208-254165 5.46e-01 100 chrXII:837634-839438 7.73e-01 100 chrXI:325910-327649 8.40e-01 100 chrXV:487437-487763 9.51e-01 100 chrX:422682-422782 5.25e-04 60_[+2(9.85e-08)]_20 chrXVI:498018-499324 4.38e-02 100 chrXII:514052-514907 8.39e-01 100 chrVII:661541-661945 4.40e-03 61_[+2(9.46e-07)]_19 chrXV:274449-275007 3.45e-08 [+2(6.52e-11)]_80 chrXIII:50719-51408 1.29e-02 45_[+3(4.97e-06)]_40 chrIV:525402-527329 4.47e-01 100 chrXIII:287988-289997 2.80e-01 100 chrVII:726415-726737 1.57e-02 6_[+3(2.55e-06)]_11_[+3(8.39e-05)]_\ 53 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************