******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--HSF1/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:71797-73275 1.0000 100 chrI:81906-82390 1.0000 100 chrI:130939-132025 1.0000 100 chrI:138946-139366 1.0000 100 chrI:141144-144358 1.0000 100 chrI:166174-166589 1.0000 100 chrI:181122-181485 1.0000 100 chrI:182130-183219 1.0000 100 chrII:9457-10184 1.0000 100 chrII:36239-36593 1.0000 100 chrII:44827-45351 1.0000 100 chrII:59825-61638 1.0000 100 chrII:87917-88563 1.0000 100 chrII:88955-90432 1.0000 100 chrII:139228-139932 1.0000 100 chrII:165074-165598 1.0000 100 chrII:167891-168221 1.0000 100 chrII:168443-169434 1.0000 100 chrII:181349-181970 1.0000 100 chrII:197256-197856 1.0000 100 chrII:226976-227332 1.0000 100 chrII:266183-266666 1.0000 100 chrII:290776-292313 1.0000 100 chrII:326390-327108 1.0000 100 chrII:332279-333017 1.0000 100 chrII:347427-347941 1.0000 100 chrII:350621-351068 1.0000 100 chrII:373880-375740 1.0000 100 chrII:380935-381521 1.0000 100 chrII:393446-394772 1.0000 100 chrII:405682-406332 1.0000 100 chrII:415509-416679 1.0000 100 chrII:443858-445422 1.0000 100 chrII:445727-445902 1.0000 100 chrII:592273-593471 1.0000 100 chrII:603732-607101 1.0000 100 chrII:642834-643250 1.0000 100 chrII:644937-645401 1.0000 100 chrIII:73-607 1.0000 100 chrIII:839-1052 1.0000 100 chrIII:38878-39431 1.0000 100 chrIII:48856-49970 1.0000 100 chrIII:78405-78852 1.0000 100 chrIII:82384-82653 1.0000 100 chrIII:90849-91135 1.0000 100 chrIII:107066-107813 1.0000 100 chrIII:123160-123814 1.0000 100 chrIII:127513-127928 1.0000 100 chrIII:137230-137554 1.0000 100 chrIII:137792-138983 1.0000 100 chrIII:142604-142983 1.0000 100 chrIII:149720-150197 1.0000 100 chrIII:151118-151526 1.0000 100 chrIII:163484-163878 1.0000 100 chrIII:168073-168556 1.0000 100 chrIII:177234-178775 1.0000 100 chrIII:227754-228517 1.0000 100 chrIII:295304-295883 1.0000 100 chrIII:315605-316027 1.0000 100 chrIII:316233-316593 1.0000 100 chrIV:12-224 1.0000 100 chrIV:45192-46142 1.0000 100 chrIV:83349-84128 1.0000 100 chrIV:117148-118218 1.0000 100 chrIV:118426-118786 1.0000 100 chrIV:129136-131007 1.0000 100 chrIV:216569-217825 1.0000 100 chrIV:221709-222374 1.0000 100 chrIV:229448-230774 1.0000 100 chrIV:307997-308392 1.0000 100 chrIV:321628-321959 1.0000 100 chrIV:340622-341818 1.0000 100 chrIV:342042-342374 1.0000 100 chrIV:358060-358477 1.0000 100 chrIV:359377-359783 1.0000 100 chrIV:410167-410798 1.0000 100 chrIV:411264-411671 1.0000 100 chrIV:416009-417364 1.0000 100 chrIV:433838-435088 1.0000 100 chrIV:437553-438081 1.0000 100 chrIV:465194-467556 1.0000 100 chrIV:488382-489107 1.0000 100 chrIV:490658-492904 1.0000 100 chrIV:519655-519905 1.0000 100 chrIV:520722-521436 1.0000 100 chrIV:555753-556667 1.0000 100 chrIV:568668-569368 1.0000 100 chrIV:578739-580687 1.0000 100 chrIV:600792-601984 1.0000 100 chrIV:619722-620195 1.0000 100 chrIV:644933-645372 1.0000 100 chrIV:667709-668263 1.0000 100 chrIV:764960-765640 1.0000 100 chrIV:769051-770024 1.0000 100 chrIV:802566-803038 1.0000 100 chrIV:806060-806745 1.0000 100 chrIV:808318-810044 1.0000 100 chrIV:835752-837984 1.0000 100 chrIV:884255-884654 1.0000 100 chrIV:890388-893914 1.0000 100 chrIV:946130-946616 1.0000 100 chrIV:973700-974742 1.0000 100 chrIV:980704-981154 1.0000 100 chrIV:992723-993363 1.0000 100 chrIV:1013509-1013980 1.0000 100 chrIV:1016965-1017491 1.0000 100 chrIV:1075280-1075733 1.0000 100 chrIV:1095156-1095665 1.0000 100 chrIV:1150692-1151165 1.0000 100 chrIV:1162942-1164597 1.0000 100 chrIV:1175742-1176546 1.0000 100 chrIV:1201522-1202021 1.0000 100 chrIV:1236536-1238517 1.0000 100 chrIV:1256582-1257281 1.0000 100 chrIV:1300856-1301338 1.0000 100 chrIV:1305408-1305775 1.0000 100 chrIV:1306022-1306178 1.0000 100 chrIV:1351025-1353053 1.0000 100 chrIV:1354730-1356094 1.0000 100 chrIV:1359421-1361040 1.0000 100 chrIV:1401099-1402781 1.0000 100 chrIV:1450723-1451880 1.0000 100 chrIV:1461438-1461851 1.0000 100 chrIX:68263-68500 1.0000 100 chrIX:69116-69572 1.0000 100 chrIX:98560-99342 1.0000 100 chrIX:99635-100370 1.0000 100 chrIX:174532-175204 1.0000 100 chrIX:183117-183716 1.0000 100 chrIX:197408-198413 1.0000 100 chrIX:210655-211855 1.0000 100 chrIX:248557-249015 1.0000 100 chrIX:249178-249344 1.0000 100 chrIX:254227-254561 1.0000 100 chrIX:255016-255854 1.0000 100 chrIX:256014-256989 1.0000 100 chrIX:257365-258173 1.0000 100 chrIX:300098-300484 1.0000 100 chrIX:323759-324386 1.0000 100 chrIX:325738-326125 1.0000 100 chrIX:336018-336631 1.0000 100 chrIX:370238-370852 1.0000 100 chrIX:391099-392503 1.0000 100 chrV:53513-54015 1.0000 100 chrV:61119-62156 1.0000 100 chrV:67160-69359 1.0000 100 chrV:85114-86991 1.0000 100 chrV:99849-100308 1.0000 100 chrV:117439-118296 1.0000 100 chrV:130835-131408 1.0000 100 chrV:135237-136096 1.0000 100 chrV:138470-139940 1.0000 100 chrV:140208-140908 1.0000 100 chrV:176876-177463 1.0000 100 chrV:207355-208156 1.0000 100 chrV:221902-223017 1.0000 100 chrV:225475-225699 1.0000 100 chrV:249607-250512 1.0000 100 chrV:269203-269878 1.0000 100 chrV:270079-271103 1.0000 100 chrV:288152-288749 1.0000 100 chrV:305816-307409 1.0000 100 chrV:311727-312280 1.0000 100 chrV:354700-355359 1.0000 100 chrV:362059-362483 1.0000 100 chrV:363688-365446 1.0000 100 chrV:395949-398058 1.0000 100 chrV:423062-423606 1.0000 100 chrV:431028-431915 1.0000 100 chrV:434388-434977 1.0000 100 chrV:435570-436008 1.0000 100 chrV:438529-438930 1.0000 100 chrV:441811-442686 1.0000 100 chrV:443057-443359 1.0000 100 chrV:469233-469687 1.0000 100 chrV:487213-487749 1.0000 100 chrV:492172-492575 1.0000 100 chrV:551029-551547 1.0000 100 chrVI:63984-65427 1.0000 100 chrVI:95473-95919 1.0000 100 chrVI:100992-103081 1.0000 100 chrVI:104837-107025 1.0000 100 chrVI:136952-137712 1.0000 100 chrVI:157848-158233 1.0000 100 chrVI:162017-162385 1.0000 100 chrVI:167225-167672 1.0000 100 chrVI:180633-181270 1.0000 100 chrVI:191195-191772 1.0000 100 chrVI:210325-211174 1.0000 100 chrVI:220054-222250 1.0000 100 chrVI:223235-224157 1.0000 100 chrVI:226416-227271 1.0000 100 chrVII:264-968 1.0000 100 chrVII:110374-110786 1.0000 100 chrVII:115338-115758 1.0000 100 chrVII:122065-123167 1.0000 100 chrVII:148147-149543 1.0000 100 chrVII:185355-185906 1.0000 100 chrVII:205322-205770 1.0000 100 chrVII:254126-254690 1.0000 100 chrVII:276985-278690 1.0000 100 chrVII:287166-287654 1.0000 100 chrVII:310393-312082 1.0000 100 chrVII:319249-320130 1.0000 100 chrVII:328403-329370 1.0000 100 chrVII:345853-346623 1.0000 100 chrVII:364880-366646 1.0000 100 chrVII:371290-371561 1.0000 100 chrVII:398010-398247 1.0000 100 chrVII:398590-400121 1.0000 100 chrVII:401360-401619 1.0000 100 chrVII:405458-406051 1.0000 100 chrVII:411639-412576 1.0000 100 chrVII:422853-423375 1.0000 100 chrVII:437300-439963 1.0000 100 chrVII:440480-441071 1.0000 100 chrVII:479140-482680 1.0000 100 chrVII:483367-483763 1.0000 100 chrVII:531396-532003 1.0000 100 chrVII:533844-535188 1.0000 100 chrVII:541714-542139 1.0000 100 chrVII:544067-545980 1.0000 100 chrVII:555127-555860 1.0000 100 chrVII:648747-649353 1.0000 100 chrVII:661546-661986 1.0000 100 chrVII:700380-701245 1.0000 100 chrVII:706660-707186 1.0000 100 chrVII:726410-726768 1.0000 100 chrVII:730971-731364 1.0000 100 chrVII:736189-736542 1.0000 100 chrVII:738828-739603 1.0000 100 chrVII:770706-773367 1.0000 100 chrVII:773867-774729 1.0000 100 chrVII:779406-779956 1.0000 100 chrVII:788128-788748 1.0000 100 chrVII:794203-794573 1.0000 100 chrVII:798512-799836 1.0000 100 chrVII:806434-808283 1.0000 100 chrVII:809566-809997 1.0000 100 chrVII:823333-823726 1.0000 100 chrVII:828350-828972 1.0000 100 chrVII:845452-846054 1.0000 100 chrVII:856632-857677 1.0000 100 chrVII:876188-878146 1.0000 100 chrVII:878543-879054 1.0000 100 chrVII:882775-884280 1.0000 100 chrVII:914432-916731 1.0000 100 chrVII:930735-931648 1.0000 100 chrVII:1000340-1000593 1.0000 100 chrVII:1004038-1004432 1.0000 100 chrVIII:34476-36100 1.0000 100 chrVIII:62451-62912 1.0000 100 chrVIII:74731-75928 1.0000 100 chrVIII:103540-105259 1.0000 100 chrVIII:115798-116380 1.0000 100 chrVIII:125900-126314 1.0000 100 chrVIII:132327-133112 1.0000 100 chrVIII:134144-134765 1.0000 100 chrVIII:145854-146477 1.0000 100 chrVIII:148952-149443 1.0000 100 chrVIII:174926-175724 1.0000 100 chrVIII:237758-238131 1.0000 100 chrVIII:271886-272438 1.0000 100 chrVIII:296769-297256 1.0000 100 chrVIII:358212-358787 1.0000 100 chrVIII:381479-382366 1.0000 100 chrVIII:382735-383353 1.0000 100 chrVIII:388654-389010 1.0000 100 chrVIII:451004-453017 1.0000 100 chrVIII:466835-467313 1.0000 100 chrVIII:475481-475900 1.0000 100 chrVIII:505810-506213 1.0000 100 chrVIII:555783-556921 1.0000 100 chrVIII:562348-562592 1.0000 100 chrX:58988-59362 1.0000 100 chrX:73392-74741 1.0000 100 chrX:74913-75743 1.0000 100 chrX:90009-90448 1.0000 100 chrX:115845-116267 1.0000 100 chrX:120333-121884 1.0000 100 chrX:139283-140388 1.0000 100 chrX:157420-157820 1.0000 100 chrX:165749-169598 1.0000 100 chrX:196336-197451 1.0000 100 chrX:204548-205033 1.0000 100 chrX:227747-228593 1.0000 100 chrX:233720-234148 1.0000 100 chrX:353985-354464 1.0000 100 chrX:355176-355777 1.0000 100 chrX:374182-374856 1.0000 100 chrX:378213-378595 1.0000 100 chrX:380401-381610 1.0000 100 chrX:390873-391338 1.0000 100 chrX:391516-392117 1.0000 100 chrX:396595-396948 1.0000 100 chrX:414775-415214 1.0000 100 chrX:415728-416225 1.0000 100 chrX:422710-423141 1.0000 100 chrX:424240-424724 1.0000 100 chrX:517637-518176 1.0000 100 chrX:519737-522582 1.0000 100 chrX:522938-524447 1.0000 100 chrX:531581-532260 1.0000 100 chrX:538031-538797 1.0000 100 chrX:540714-542482 1.0000 100 chrX:542797-543266 1.0000 100 chrX:545453-545731 1.0000 100 chrX:607883-608174 1.0000 100 chrX:617700-618228 1.0000 100 chrX:647656-649151 1.0000 100 chrX:651256-651730 1.0000 100 chrX:651904-652605 1.0000 100 chrX:652767-653099 1.0000 100 chrX:663350-664487 1.0000 100 chrX:703250-703720 1.0000 100 chrX:745074-745749 1.0000 100 chrXI:2-179 1.0000 100 chrXI:767-1064 1.0000 100 chrXI:46711-47003 1.0000 100 chrXI:67797-68272 1.0000 100 chrXI:74416-74826 1.0000 100 chrXI:83975-84455 1.0000 100 chrXI:99719-99995 1.0000 100 chrXI:100662-105661 1.0000 100 chrXI:108748-110140 1.0000 100 chrXI:140806-141485 1.0000 100 chrXI:141726-142814 1.0000 100 chrXI:158232-159626 1.0000 100 chrXI:162248-162716 1.0000 100 chrXI:163450-164781 1.0000 100 chrXI:202383-203254 1.0000 100 chrXI:219718-220073 1.0000 100 chrXI:282834-284433 1.0000 100 chrXI:302711-303192 1.0000 100 chrXI:307938-308505 1.0000 100 chrXI:313227-314018 1.0000 100 chrXI:326441-327548 1.0000 100 chrXI:334147-334931 1.0000 100 chrXI:382152-382453 1.0000 100 chrXI:431375-432304 1.0000 100 chrXI:457950-458856 1.0000 100 chrXI:490774-491222 1.0000 100 chrXI:512924-513595 1.0000 100 chrXI:517789-518066 1.0000 100 chrXI:578741-579358 1.0000 100 chrXI:618645-619249 1.0000 100 chrXI:666607-666801 1.0000 100 chrXII:47665-49248 1.0000 100 chrXII:64319-66531 1.0000 100 chrXII:87424-88837 1.0000 100 chrXII:92400-92935 1.0000 100 chrXII:97075-98865 1.0000 100 chrXII:167784-168264 1.0000 100 chrXII:198328-199779 1.0000 100 chrXII:201656-202698 1.0000 100 chrXII:214604-215067 1.0000 100 chrXII:231989-234167 1.0000 100 chrXII:241630-242026 1.0000 100 chrXII:262865-263917 1.0000 100 chrXII:281947-284417 1.0000 100 chrXII:366047-366566 1.0000 100 chrXII:369668-370272 1.0000 100 chrXII:374217-374680 1.0000 100 chrXII:423727-424492 1.0000 100 chrXII:426889-427418 1.0000 100 chrXII:448485-449037 1.0000 100 chrXII:459608-460694 1.0000 100 chrXII:498333-500246 1.0000 100 chrXII:572533-573791 1.0000 100 chrXII:592325-593031 1.0000 100 chrXII:605120-605627 1.0000 100 chrXII:627664-628633 1.0000 100 chrXII:636732-639939 1.0000 100 chrXII:656845-657204 1.0000 100 chrXII:663671-665515 1.0000 100 chrXII:673587-674865 1.0000 100 chrXII:710455-710888 1.0000 100 chrXII:713146-713631 1.0000 100 chrXII:730970-731207 1.0000 100 chrXII:731398-732341 1.0000 100 chrXII:734590-734967 1.0000 100 chrXII:780489-781874 1.0000 100 chrXII:783896-784525 1.0000 100 chrXII:790893-791748 1.0000 100 chrXII:793774-797668 1.0000 100 chrXII:805811-806817 1.0000 100 chrXII:809758-812239 1.0000 100 chrXII:818503-819180 1.0000 100 chrXII:837677-839237 1.0000 100 chrXII:874896-877020 1.0000 100 chrXII:897504-899726 1.0000 100 chrXII:921679-923716 1.0000 100 chrXII:930555-931821 1.0000 100 chrXII:932093-932540 1.0000 100 chrXII:962857-963250 1.0000 100 chrXII:975758-976201 1.0000 100 chrXII:1018120-1019531 1.0000 100 chrXII:1028171-1028584 1.0000 100 chrXII:1029126-1029762 1.0000 100 chrXII:1051942-1052229 1.0000 100 chrXIII:5443-5663 1.0000 100 chrXIII:24017-25823 1.0000 100 chrXIII:91368-92112 1.0000 100 chrXIII:103154-103777 1.0000 100 chrXIII:103935-104163 1.0000 100 chrXIII:131657-132132 1.0000 100 chrXIII:145896-147216 1.0000 100 chrXIII:168246-169040 1.0000 100 chrXIII:195938-196303 1.0000 100 chrXIII:225312-226637 1.0000 100 chrXIII:253366-253568 1.0000 100 chrXIII:258930-259444 1.0000 100 chrXIII:288089-290050 1.0000 100 chrXIII:290565-291103 1.0000 100 chrXIII:296764-298897 1.0000 100 chrXIII:302846-303154 1.0000 100 chrXIII:320998-321321 1.0000 100 chrXIII:352081-353185 1.0000 100 chrXIII:362930-363429 1.0000 100 chrXIII:372215-372663 1.0000 100 chrXIII:379064-379597 1.0000 100 chrXIII:420335-420847 1.0000 100 chrXIII:454022-455417 1.0000 100 chrXIII:463327-463886 1.0000 100 chrXIII:480401-480834 1.0000 100 chrXIII:499457-500637 1.0000 100 chrXIII:500844-501059 1.0000 100 chrXIII:504894-505203 1.0000 100 chrXIII:549994-551813 1.0000 100 chrXIII:552105-553180 1.0000 100 chrXIII:557441-558353 1.0000 100 chrXIII:572720-573335 1.0000 100 chrXIII:586113-587408 1.0000 100 chrXIII:631157-634156 1.0000 100 chrXIII:651444-652944 1.0000 100 chrXIII:701831-703318 1.0000 100 chrXIII:731870-733118 1.0000 100 chrXIII:747610-748144 1.0000 100 chrXIII:753047-755809 1.0000 100 chrXIII:759359-762984 1.0000 100 chrXIII:768211-768449 1.0000 100 chrXIII:808120-808557 1.0000 100 chrXIII:837739-838256 1.0000 100 chrXIII:861177-861674 1.0000 100 chrXIII:872687-873096 1.0000 100 chrXIV:6616-6986 1.0000 100 chrXIV:63124-64378 1.0000 100 chrXIV:89002-89681 1.0000 100 chrXIV:96033-96461 1.0000 100 chrXIV:102565-103157 1.0000 100 chrXIV:104602-105056 1.0000 100 chrXIV:108101-109351 1.0000 100 chrXIV:241392-242536 1.0000 100 chrXIV:302640-303701 1.0000 100 chrXIV:330797-331097 1.0000 100 chrXIV:374683-375091 1.0000 100 chrXIV:442770-443244 1.0000 100 chrXIV:443426-444793 1.0000 100 chrXIV:479787-481550 1.0000 100 chrXIV:493926-495736 1.0000 100 chrXIV:499289-500763 1.0000 100 chrXIV:505903-507820 1.0000 100 chrXIV:509198-510262 1.0000 100 chrXIV:518177-519143 1.0000 100 chrXIV:525068-525335 1.0000 100 chrXIV:546533-547586 1.0000 100 chrXIV:560186-560916 1.0000 100 chrXIV:568054-568552 1.0000 100 chrXIV:569673-570093 1.0000 100 chrXIV:577203-577648 1.0000 100 chrXIV:602051-602572 1.0000 100 chrXIV:619148-621769 1.0000 100 chrXIV:631667-632125 1.0000 100 chrXIV:632402-632895 1.0000 100 chrXIV:725662-726379 1.0000 100 chrXIV:763007-763469 1.0000 100 chrXIV:783746-784327 1.0000 100 chrXV:79722-80138 1.0000 100 chrXV:92590-94787 1.0000 100 chrXV:109554-110678 1.0000 100 chrXV:110853-111208 1.0000 100 chrXV:113581-113882 1.0000 100 chrXV:159185-160130 1.0000 100 chrXV:160323-160690 1.0000 100 chrXV:161098-161759 1.0000 100 chrXV:168083-168325 1.0000 100 chrXV:170284-170827 1.0000 100 chrXV:216288-216706 1.0000 100 chrXV:226421-226931 1.0000 100 chrXV:228081-228850 1.0000 100 chrXV:252870-254131 1.0000 100 chrXV:264856-265597 1.0000 100 chrXV:274444-274989 1.0000 100 chrXV:281985-282438 1.0000 100 chrXV:287155-288453 1.0000 100 chrXV:300907-301767 1.0000 100 chrXV:302316-302575 1.0000 100 chrXV:340003-340729 1.0000 100 chrXV:353908-354313 1.0000 100 chrXV:369892-371340 1.0000 100 chrXV:378181-382791 1.0000 100 chrXV:407633-408160 1.0000 100 chrXV:438473-438964 1.0000 100 chrXV:444635-446248 1.0000 100 chrXV:464277-464943 1.0000 100 chrXV:487430-487763 1.0000 100 chrXV:504971-505488 1.0000 100 chrXV:571052-572143 1.0000 100 chrXV:594304-594665 1.0000 100 chrXV:639152-639442 1.0000 100 chrXV:663539-664053 1.0000 100 chrXV:678044-679174 1.0000 100 chrXV:710121-710773 1.0000 100 chrXV:722779-724714 1.0000 100 chrXV:758596-759493 1.0000 100 chrXV:779688-781008 1.0000 100 chrXV:853791-854809 1.0000 100 chrXV:866279-867881 1.0000 100 chrXV:876497-880627 1.0000 100 chrXV:901443-901637 1.0000 100 chrXV:925177-925402 1.0000 100 chrXV:964383-965355 1.0000 100 chrXV:968129-968495 1.0000 100 chrXV:976377-976689 1.0000 100 chrXV:978462-979181 1.0000 100 chrXV:979765-981074 1.0000 100 chrXV:1003993-1004562 1.0000 100 chrXV:1011215-1012270 1.0000 100 chrXV:1025734-1026065 1.0000 100 chrXV:1027771-1030355 1.0000 100 chrXVI:55875-56429 1.0000 100 chrXVI:74339-77887 1.0000 100 chrXVI:97898-99239 1.0000 100 chrXVI:172900-174071 1.0000 100 chrXVI:188549-188930 1.0000 100 chrXVI:209430-210469 1.0000 100 chrXVI:213153-214072 1.0000 100 chrXVI:280601-282970 1.0000 100 chrXVI:302486-304327 1.0000 100 chrXVI:338759-339167 1.0000 100 chrXVI:350291-352717 1.0000 100 chrXVI:371027-372960 1.0000 100 chrXVI:378655-378999 1.0000 100 chrXVI:404502-406643 1.0000 100 chrXVI:432549-434126 1.0000 100 chrXVI:435671-436182 1.0000 100 chrXVI:519924-520529 1.0000 100 chrXVI:560018-560500 1.0000 100 chrXVI:572180-572659 1.0000 100 chrXVI:578558-579705 1.0000 100 chrXVI:581843-582408 1.0000 100 chrXVI:622356-623137 1.0000 100 chrXVI:645256-646170 1.0000 100 chrXVI:653805-655041 1.0000 100 chrXVI:689384-689891 1.0000 100 chrXVI:699097-700684 1.0000 100 chrXVI:731600-733108 1.0000 100 chrXVI:744075-744583 1.0000 100 chrXVI:768354-769654 1.0000 100 chrXVI:775645-776114 1.0000 100 chrXVI:794250-794825 1.0000 100 chrXVI:794996-796163 1.0000 100 chrXVI:810576-810977 1.0000 100 chrXVI:819350-821262 1.0000 100 chrXVI:842817-843705 1.0000 100 chrXVI:856728-857171 1.0000 100 chrXVI:860128-860708 1.0000 100 chrXVI:879903-880570 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--HSF1/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--HSF1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--HSF1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 568 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 56800 N= 568 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.300 C 0.200 G 0.200 T 0.300 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/RM11-1A--HSF1/background): A 0.305 C 0.195 G 0.195 T 0.305 ******************************************************************************** ******************************************************************************** MOTIF RGRTYMBSGGTTCGATYCCSVKHSRGRGC MEME-1 width = 29 sites = 75 llr = 1487 E-value = 1.1e-306 ******************************************************************************** -------------------------------------------------------------------------------- Motif RGRTYMBSGGTTCGATYCCSVKHSRGRGC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 6232:3:12::::3a1::::2:3132413 pos.-specific C 11:16533::::a::15a75414312227 probability G 377::1458a:::7:2:::445:54545: matrix T :::73:21::aa:::55:21:43221121 bits 2.4 * * 2.1 * * * 1.9 * * * 1.6 **** * * Relative 1.4 ***** * * Entropy 1.2 * ******* ** (28.6 bits) 0.9 ** * ******* **** * 0.7 **** ********* ****** * 0.5 *************** ******** * ** 0.2 ***************************** 0.0 ----------------------------- Multilevel AGGTCCGGGGTTCGATCCCCCGCGGGGGC consensus G AATACCA A T TGGTTCAAACA sequence T A A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRTYMBSGGTTCGATYCCSVKHSRGRGC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXVI:581843-582408 + 30 4.57e-13 CTTAATCATA AGGTTAGGGGTTCGAGCCCCCTACAGGGC TTTCTTTTTT chrXIII:480401-480834 - 55 4.57e-13 CTTAATCATA AGGTTAGGGGTTCGAGCCCCCTACAGGGC TTCTTTTTTT chrX:414775-415214 + 65 4.57e-13 CTTAATCATA AGGTTAGGGGTTCGAGCCCCCTACAGGGC TAATATT chrV:435570-436008 - 14 4.57e-13 CTTAATCATA AGGTTAGGGGTTCGAGCCCCCTACAGGGC TTTCTTTTTA chrIV:1201522-1202021 + 72 4.57e-13 CTTAATCATA AGGTTAGGGGTTCGAGCCCCCTACAGGGC chrIII:151118-151526 - 13 4.57e-13 CTTAATCATA AGGTTAGGGGTTCGAGCCCCCTACAGGGC TTTCTTTTTT chrXIV:631667-632125 - 1 6.46e-13 AGGGTGCGGG AGGTCCCGGGTTCGAGTCCCGGCTCGCCC chrXIV:569673-570093 - 35 1.26e-12 AATAACGCGG GGATCAGCGGTTCGATCCCGCTAGAGACC ATTCTTTTTT chrXII:1051942-1052229 - 37 1.26e-12 AATAACGCGG GGATCAGCGGTTCGATCCCGCTAGAGACC ATTATTTTTT chrVII:738828-739603 + 1 1.26e-12 . GGATCAGCGGTTCGATCCCGCTAGAGACC ATTTACTTTT chrV:551029-551547 - 48 1.26e-12 AATAACGCGG GGATCAGCGGTTCGATCCCGCTAGAGACC ATTTTTTTTG chrV:443057-443359 - 45 1.26e-12 AATAACGCGG GGATCAGCGGTTCGATCCCGCTAGAGACC ATATTTTTTT chrIV:667709-668263 - 72 1.26e-12 . GGATCAGCGGTTCGATCCCGCTAGAGACC ATTTTTATTT chrII:197256-197856 + 32 1.26e-12 AATAACGCGG GGATCAGCGGTTCGATCCCGCTAGAGACC ATTTTTTTGC chrXVI:860128-860708 + 52 5.14e-12 TGCCATCGTT GGGCCCCCGGTTCGATTCCGGGCTTGCGC AGATTTTATT chrXV:281985-282438 + 44 5.14e-12 TGCCATCGTT GGGCCCCCGGTTCGATTCCGGGCTTGCGC ATTTCTTTTT chrX:396595-396948 - 6 5.14e-12 TGCCATCGTT GGGCCCCCGGTTCGATTCCGGGCTTGCGC ATTTC chrVIII:475481-475900 - 67 2.11e-11 GGCAA AGGTCCCGAGTTCGATCCTCGGTTGGAAC ATTTTAACAT chrIV:1075280-1075733 - 17 2.11e-11 CACACGGCAA AGGTCCCGAGTTCGATCCTCGGTTGGAAC ATTTGTTTTT chrV:311727-312280 - 71 2.41e-11 G AGGTCATCGGTTCGATTCCGGTTGCGTCC AATGAAATCT chrIV:1016965-1017491 - 30 1.08e-10 TCTCACCGTG GAGACCGGGGTTCGACTCCCCGCTTCGGA GTTTCTTTTT chrXV:663539-664053 - 67 1.92e-10 GCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC ATTTTTAAGA chrXIV:96033-96461 - 45 1.92e-10 TTCCAAGGTG GGGACACGGGTTCGATTCTCGTACCGCTC AAATTTTTTG chrXIII:420335-420847 - 48 1.92e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC ATTTTTATCT chrXIII:372215-372663 - 57 1.92e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC ATTTTTTTAG chrXII:92400-92935 + 4 1.92e-10 GAG AGGCCCTGGGTTCAATTCCCAGCTCGCCC CTTTATTTTC chrX:378213-378595 + 50 1.92e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC AATTTTTTGT chrVII:823333-823726 + 47 1.92e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC ATTTTTTGAA chrVII:779406-779956 + 27 1.92e-10 TTCCAAGGTG GGGACACGGGTTCGATTCTCGTACCGCTC AAGATTACTT chrV:438529-438930 + 65 1.92e-10 AACACGCAGA ACGTCCCCAGTTCGATCCTGGGCGAAATC AATTTTT chrXV:438473-438964 + 41 2.15e-10 GGATACCGAA ATGTCAGGGGTTCGAGCCCCCTATGAGGA GTTCTTTATT chrXI:578741-579358 + 32 2.15e-10 GGATACCGAA ATGTCAGGGGTTCGAGCCCCCTATGAGGA GTTCTTTACT chrVII:115338-115758 + 56 2.15e-10 GGATACCGAA ATGTCAGGGGTTCGAGCCCCCTATGAGGA GTTCTTTTTT chrXIII:463327-463886 + 40 2.68e-10 TGTCGCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA GATTTTTTTA chrXII:426889-427418 + 71 2.68e-10 TGTCGCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA G chrX:540714-542482 + 2 2.68e-10 C CAGATCGGGGTTCAATTCCCCGTCGCGGA GATTTTTTTG chrX:355176-355777 + 72 2.68e-10 TGTCGCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA chrX:204548-205033 + 37 2.68e-10 TGTCGCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA GATTTTTTTT chrVII:531396-532003 + 3 2.68e-10 GC CAGATCGGGGTTCAATTCCCCGTCGCGGA GATATTTTTT chrIV:568668-569368 + 38 2.68e-10 TGTCGCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA GAATTTTTTT chrII:405682-406332 + 45 2.68e-10 TGTCGCGTGC CAGATCGGGGTTCAATTCCCCGTCGCGGA GATTTTTTTG chrIV:644933-645372 - 52 2.99e-10 TTTGATCCGG ACAACCCCGGTTCGAATCCGGGTAGGACC TTTTTTAACT chrIII:168073-168556 - 38 2.99e-10 TTTGATCCGG ACAACCCCGGTTCGAATCCGGGTAGGACC TTTTTTTGAA chrXIV:104602-105056 + 69 3.33e-10 AGTAATGTGG AGATCATCGGTTCAAATCCGATTGGAAGC ATA chrVIII:115798-116380 - 69 3.33e-10 TGG AGATCATCGGTTCAAATCCGATTGGAAGC ATTTTTTGCA chrII:266183-266666 + 47 3.33e-10 AGTAATGTGG AGATCATCGGTTCAAATCCGATTGGAAGC ATTTTTTTGA chrXIII:290565-291103 + 59 4.57e-10 TTTCACCGTG GAGACCGGGGTTCGACTCCCCGTATCGGA GTCTTCTTTT chrVII:541714-542139 + 16 4.57e-10 TTTCACCGTG GAGACCGGGGTTCGACTCCCCGTATCGGA GTGTTCTTTT chrV:176876-177463 + 22 4.57e-10 TTTCACCGTG GAGACCGGGGTTCGACTCCCCGTATCGGA GTACTTTTTT chrXIII:747610-748144 - 66 6.89e-10 ATCAGA AGATTATGGGTTCGACCCCCATCGTGAGT GTTTTTTAGT chrXI:162248-162716 - 56 6.89e-10 TCTAATCAGA AGATTATGGGTTCGACCCCCATCGTGAGT GTTTTTTACA chrX:374182-374856 - 38 6.89e-10 TCTAATCAGA AGATTATGGGTTCGACCCCCATCGTGAGT GCTTTGTTTC chrVII:736189-736542 + 67 6.89e-10 TCTAATCAGA AGATTATGGGTTCGACCCCCATCGTGAGT GTTGT chrV:130835-131408 - 12 7.61e-10 TTTGATCCGA ACAACCCCGGTTCGAATCCGGGTAAGACC TATTTTTTTC chrXI:490774-491222 + 63 1.36e-09 ACGAACCAGA AGATTCCAGGTTCAAGTCCTGGCGGGGAA GAATTTTTT chrV:492172-492575 - 30 1.36e-09 ACGAACCAGA AGATTCCAGGTTCAAGTCCTGGCGGGGAA GGATTATTTT chrIV:619722-620195 - 62 1.36e-09 ACGAACCAGA AGATTCCAGGTTCAAGTCCTGGCGGGGAA GATTTTTTAT chrXVI:435671-436182 - 18 4.32e-09 GCAAATCTGT TGGTCCTTAGTTCGATCCTGAGTGCGAGC TTTCTTTTTT chrIV:884255-884654 + 60 4.32e-09 AGCAACGCGA CCGTCGTGGGTTCAAACCCCACCTCGAGC ACTTTCTCTT chrII:642834-643250 - 16 4.32e-09 GCAAATCTGT TGGTCCTTAGTTCGATCCTGAGTGCGAGC TTCTTTTTTT chrXVI:856728-857171 + 46 4.70e-09 AGCATGGGAG AGGTCTCCGGTTCGATTCCGGACTCGTCC ATTTTAATTT chrXIII:320998-321321 - 39 4.70e-09 AGCATGGGAG AGGTCTCCGGTTCGATTCCGGACTCGTCC ATTTTTTATT chrXIV:632402-632895 + 45 6.01e-09 GTTAATCGCA AGATCGTGAGTTCAACCCTCACTGGGGTC GTTTTTTTTC chrXII:975758-976201 - 55 6.01e-09 GTTAATCGCA AGATCGTGAGTTCAACCCTCACTGGGGTC GTTTATTTTT chrVII:730971-731364 + 64 6.01e-09 GTTAATCGCA AGATCGTGAGTTCAACCCTCACTGGGGTC GTTTTTTG chrVIII:466835-467313 + 8 8.92e-09 AATGCAA AGGTCGCTAGTTCAATTCTGGCAGGTGGC ATTATACCGG chrIV:1095156-1095665 - 11 1.12e-08 AGATATCTGG AGGTCCTGTGTTCGATCCACAGAGTTCGC ATTTTTATTT chrXVI:55875-56429 - 68 2.30e-08 CGAA GGGTTGCAGGTTCAATTCCTGTCCGTTTC AATTAATTTT chrXIII:379064-379597 - 24 2.30e-08 TGCAATCGAA GGGTTGCAGGTTCAATTCCTGTCCGTTTC AATTTATTTT chrX:415728-416225 - 6 2.30e-08 TGCAATCGAA GGGTTGCAGGTTCAATTCCTGTCCGTTTC AATTT chrXVI:744075-744583 + 47 2.82e-08 TGTAATGCAA AGGTCGTTAGTTCAATTCTGACAGGTGGC AAAATTTTTT chrX:424240-424724 + 4 3.44e-08 GAA GGATGCGAGGTTCGAACTCGCGCGGACAA CCGTCCAACA chrIV:519655-519905 - 64 3.44e-08 TTATTGAA GGATGCGAGGTTCGAACTCGCGCGGACAA CCGTCCAACA chrII:347427-347941 - 20 3.44e-08 TATTACTGAA GGATGCGAGGTTCGAACTCGCGCGGACAA CCGTCCAACA chrVIII:358212-358787 - 30 4.44e-08 AGTTATCTGG AGGTCCTGTGTTCGATCCACAGAATTCGC ATATTTTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRTYMBSGGTTCGATYCCSVKHSRGRGC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:581843-582408 4.6e-13 29_[+1]_42 chrXIII:480401-480834 4.6e-13 54_[-1]_17 chrX:414775-415214 4.6e-13 64_[+1]_7 chrV:435570-436008 4.6e-13 13_[-1]_58 chrIV:1201522-1202021 4.6e-13 71_[+1] chrIII:151118-151526 4.6e-13 12_[-1]_59 chrXIV:631667-632125 6.5e-13 [-1]_71 chrXIV:569673-570093 1.3e-12 34_[-1]_37 chrXII:1051942-1052229 1.3e-12 36_[-1]_35 chrVII:738828-739603 1.3e-12 [+1]_71 chrV:551029-551547 1.3e-12 47_[-1]_24 chrV:443057-443359 1.3e-12 44_[-1]_27 chrIV:667709-668263 1.3e-12 71_[-1] chrII:197256-197856 1.3e-12 31_[+1]_40 chrXVI:860128-860708 5.1e-12 51_[+1]_20 chrXV:281985-282438 5.1e-12 43_[+1]_28 chrX:396595-396948 5.1e-12 5_[-1]_66 chrVIII:475481-475900 2.1e-11 66_[-1]_5 chrIV:1075280-1075733 2.1e-11 16_[-1]_55 chrV:311727-312280 2.4e-11 70_[-1]_1 chrIV:1016965-1017491 1.1e-10 29_[-1]_42 chrXV:663539-664053 1.9e-10 66_[-1]_5 chrXIV:96033-96461 1.9e-10 44_[-1]_27 chrXIII:420335-420847 1.9e-10 47_[-1]_24 chrXIII:372215-372663 1.9e-10 56_[-1]_15 chrXII:92400-92935 1.9e-10 3_[+1]_68 chrX:378213-378595 1.9e-10 49_[+1]_22 chrVII:823333-823726 1.9e-10 46_[+1]_25 chrVII:779406-779956 1.9e-10 26_[+1]_45 chrV:438529-438930 1.9e-10 64_[+1]_7 chrXV:438473-438964 2.1e-10 40_[+1]_31 chrXI:578741-579358 2.1e-10 31_[+1]_40 chrVII:115338-115758 2.1e-10 55_[+1]_16 chrXIII:463327-463886 2.7e-10 39_[+1]_32 chrXII:426889-427418 2.7e-10 70_[+1]_1 chrX:540714-542482 2.7e-10 1_[+1]_70 chrX:355176-355777 2.7e-10 71_[+1] chrX:204548-205033 2.7e-10 36_[+1]_35 chrVII:531396-532003 2.7e-10 2_[+1]_69 chrIV:568668-569368 2.7e-10 37_[+1]_34 chrII:405682-406332 2.7e-10 44_[+1]_27 chrIV:644933-645372 3e-10 51_[-1]_20 chrIII:168073-168556 3e-10 37_[-1]_34 chrXIV:104602-105056 3.3e-10 68_[+1]_3 chrVIII:115798-116380 3.3e-10 68_[-1]_3 chrII:266183-266666 3.3e-10 46_[+1]_25 chrXIII:290565-291103 4.6e-10 58_[+1]_13 chrVII:541714-542139 4.6e-10 15_[+1]_56 chrV:176876-177463 4.6e-10 21_[+1]_50 chrXIII:747610-748144 6.9e-10 65_[-1]_6 chrXI:162248-162716 6.9e-10 55_[-1]_16 chrX:374182-374856 6.9e-10 37_[-1]_34 chrVII:736189-736542 6.9e-10 66_[+1]_5 chrV:130835-131408 7.6e-10 11_[-1]_60 chrXI:490774-491222 1.4e-09 62_[+1]_9 chrV:492172-492575 1.4e-09 29_[-1]_42 chrIV:619722-620195 1.4e-09 61_[-1]_10 chrXVI:435671-436182 4.3e-09 17_[-1]_54 chrIV:884255-884654 4.3e-09 59_[+1]_12 chrII:642834-643250 4.3e-09 15_[-1]_56 chrXVI:856728-857171 4.7e-09 45_[+1]_26 chrXIII:320998-321321 4.7e-09 38_[-1]_33 chrXIV:632402-632895 6e-09 44_[+1]_27 chrXII:975758-976201 6e-09 54_[-1]_17 chrVII:730971-731364 6e-09 63_[+1]_8 chrVIII:466835-467313 8.9e-09 7_[+1]_64 chrIV:1095156-1095665 1.1e-08 10_[-1]_61 chrXVI:55875-56429 2.3e-08 67_[-1]_4 chrXIII:379064-379597 2.3e-08 23_[-1]_48 chrX:415728-416225 2.3e-08 5_[-1]_66 chrXVI:744075-744583 2.8e-08 46_[+1]_25 chrX:424240-424724 3.4e-08 3_[+1]_68 chrIV:519655-519905 3.4e-08 63_[-1]_8 chrII:347427-347941 3.4e-08 19_[-1]_52 chrVIII:358212-358787 4.4e-08 29_[-1]_42 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRTYMBSGGTTCGATYCCSVKHSRGRGC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RGRTYMBSGGTTCGATYCCSVKHSRGRGC width=29 seqs=75 chrXVI:581843-582408 ( 30) AGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrXIII:480401-480834 ( 55) AGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrX:414775-415214 ( 65) AGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrV:435570-436008 ( 14) AGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrIV:1201522-1202021 ( 72) AGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrIII:151118-151526 ( 13) AGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrXIV:631667-632125 ( 1) AGGTCCCGGGTTCGAGTCCCGGCTCGCCC 1 chrXIV:569673-570093 ( 35) GGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrXII:1051942-1052229 ( 37) GGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrVII:738828-739603 ( 1) GGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrV:551029-551547 ( 48) GGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrV:443057-443359 ( 45) GGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrIV:667709-668263 ( 72) GGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrII:197256-197856 ( 32) GGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrXVI:860128-860708 ( 52) GGGCCCCCGGTTCGATTCCGGGCTTGCGC 1 chrXV:281985-282438 ( 44) GGGCCCCCGGTTCGATTCCGGGCTTGCGC 1 chrX:396595-396948 ( 6) GGGCCCCCGGTTCGATTCCGGGCTTGCGC 1 chrVIII:475481-475900 ( 67) AGGTCCCGAGTTCGATCCTCGGTTGGAAC 1 chrIV:1075280-1075733 ( 17) AGGTCCCGAGTTCGATCCTCGGTTGGAAC 1 chrV:311727-312280 ( 71) AGGTCATCGGTTCGATTCCGGTTGCGTCC 1 chrIV:1016965-1017491 ( 30) GAGACCGGGGTTCGACTCCCCGCTTCGGA 1 chrXV:663539-664053 ( 67) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrXIV:96033-96461 ( 45) GGGACACGGGTTCGATTCTCGTACCGCTC 1 chrXIII:420335-420847 ( 48) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrXIII:372215-372663 ( 57) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrXII:92400-92935 ( 4) AGGCCCTGGGTTCAATTCCCAGCTCGCCC 1 chrX:378213-378595 ( 50) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrVII:823333-823726 ( 47) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrVII:779406-779956 ( 27) GGGACACGGGTTCGATTCTCGTACCGCTC 1 chrV:438529-438930 ( 65) ACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrXV:438473-438964 ( 41) ATGTCAGGGGTTCGAGCCCCCTATGAGGA 1 chrXI:578741-579358 ( 32) ATGTCAGGGGTTCGAGCCCCCTATGAGGA 1 chrVII:115338-115758 ( 56) ATGTCAGGGGTTCGAGCCCCCTATGAGGA 1 chrXIII:463327-463886 ( 40) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrXII:426889-427418 ( 71) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrX:540714-542482 ( 2) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrX:355176-355777 ( 72) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrX:204548-205033 ( 37) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrVII:531396-532003 ( 3) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrIV:568668-569368 ( 38) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrII:405682-406332 ( 45) CAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrIV:644933-645372 ( 52) ACAACCCCGGTTCGAATCCGGGTAGGACC 1 chrIII:168073-168556 ( 38) ACAACCCCGGTTCGAATCCGGGTAGGACC 1 chrXIV:104602-105056 ( 69) AGATCATCGGTTCAAATCCGATTGGAAGC 1 chrVIII:115798-116380 ( 69) AGATCATCGGTTCAAATCCGATTGGAAGC 1 chrII:266183-266666 ( 47) AGATCATCGGTTCAAATCCGATTGGAAGC 1 chrXIII:290565-291103 ( 59) GAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrVII:541714-542139 ( 16) GAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrV:176876-177463 ( 22) GAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrXIII:747610-748144 ( 66) AGATTATGGGTTCGACCCCCATCGTGAGT 1 chrXI:162248-162716 ( 56) AGATTATGGGTTCGACCCCCATCGTGAGT 1 chrX:374182-374856 ( 38) AGATTATGGGTTCGACCCCCATCGTGAGT 1 chrVII:736189-736542 ( 67) AGATTATGGGTTCGACCCCCATCGTGAGT 1 chrV:130835-131408 ( 12) ACAACCCCGGTTCGAATCCGGGTAAGACC 1 chrXI:490774-491222 ( 63) AGATTCCAGGTTCAAGTCCTGGCGGGGAA 1 chrV:492172-492575 ( 30) AGATTCCAGGTTCAAGTCCTGGCGGGGAA 1 chrIV:619722-620195 ( 62) AGATTCCAGGTTCAAGTCCTGGCGGGGAA 1 chrXVI:435671-436182 ( 18) TGGTCCTTAGTTCGATCCTGAGTGCGAGC 1 chrIV:884255-884654 ( 60) CCGTCGTGGGTTCAAACCCCACCTCGAGC 1 chrII:642834-643250 ( 16) TGGTCCTTAGTTCGATCCTGAGTGCGAGC 1 chrXVI:856728-857171 ( 46) AGGTCTCCGGTTCGATTCCGGACTCGTCC 1 chrXIII:320998-321321 ( 39) AGGTCTCCGGTTCGATTCCGGACTCGTCC 1 chrXIV:632402-632895 ( 45) AGATCGTGAGTTCAACCCTCACTGGGGTC 1 chrXII:975758-976201 ( 55) AGATCGTGAGTTCAACCCTCACTGGGGTC 1 chrVII:730971-731364 ( 64) AGATCGTGAGTTCAACCCTCACTGGGGTC 1 chrVIII:466835-467313 ( 8) AGGTCGCTAGTTCAATTCTGGCAGGTGGC 1 chrIV:1095156-1095665 ( 11) AGGTCCTGTGTTCGATCCACAGAGTTCGC 1 chrXVI:55875-56429 ( 68) GGGTTGCAGGTTCAATTCCTGTCCGTTTC 1 chrXIII:379064-379597 ( 24) GGGTTGCAGGTTCAATTCCTGTCCGTTTC 1 chrX:415728-416225 ( 6) GGGTTGCAGGTTCAATTCCTGTCCGTTTC 1 chrXVI:744075-744583 ( 47) AGGTCGTTAGTTCAATTCTGACAGGTGGC 1 chrX:424240-424724 ( 4) GGATGCGAGGTTCGAACTCGCGCGGACAA 1 chrIV:519655-519905 ( 64) GGATGCGAGGTTCGAACTCGCGCGGACAA 1 chrII:347427-347941 ( 20) GGATGCGAGGTTCGAACTCGCGCGGACAA 1 chrVIII:358212-358787 ( 30) AGGTCCTGTGTTCGATCCACAGAATTCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRTYMBSGGTTCGATYCCSVKHSRGRGC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 40896 bayes= 11.266 E= 1.1e-306 88 -70 59 -351 -93 -55 177 -293 19 -1287 174 -1287 -43 -187 -1287 124 -1287 171 -229 7 19 138 -70 -351 -1287 83 108 -34 -134 77 134 -251 -61 -1287 199 -351 -1287 -1287 236 -1287 -1287 -1287 -1287 171 -1287 -1287 -1287 171 -1287 236 -1287 -1287 7 -1287 180 -1287 171 -1287 -1287 -1287 -119 -41 -17 84 -1287 141 -1287 66 -1287 230 -1287 -293 -351 193 -1287 -43 -1287 134 113 -193 -43 108 88 -1287 -351 -129 138 34 -5 93 -1287 13 -171 38 126 -71 -19 -55 113 -81 -61 -29 148 -171 29 -29 99 -193 -151 3 138 -71 -12 177 -1287 -251 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRTYMBSGGTTCGATYCCSVKHSRGRGC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 75 E= 1.1e-306 0.560000 0.120000 0.293333 0.026667 0.160000 0.133333 0.666667 0.040000 0.346667 0.000000 0.653333 0.000000 0.226667 0.053333 0.000000 0.720000 0.000000 0.640000 0.040000 0.320000 0.346667 0.506667 0.120000 0.026667 0.000000 0.346667 0.413333 0.240000 0.120000 0.333333 0.493333 0.053333 0.200000 0.000000 0.773333 0.026667 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.320000 0.000000 0.680000 0.000000 1.000000 0.000000 0.000000 0.000000 0.133333 0.146667 0.173333 0.546667 0.000000 0.520000 0.000000 0.480000 0.000000 0.960000 0.000000 0.040000 0.026667 0.746667 0.000000 0.226667 0.000000 0.493333 0.426667 0.080000 0.226667 0.413333 0.360000 0.000000 0.026667 0.080000 0.506667 0.386667 0.293333 0.373333 0.000000 0.333333 0.093333 0.253333 0.466667 0.186667 0.266667 0.133333 0.426667 0.173333 0.200000 0.160000 0.546667 0.093333 0.373333 0.160000 0.386667 0.080000 0.106667 0.200000 0.506667 0.186667 0.280000 0.666667 0.000000 0.053333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGRTYMBSGGTTCGATYCCSVKHSRGRGC MEME-1 regular expression -------------------------------------------------------------------------------- [AG]G[GA][TA][CT][CA][GCT][GC][GA]GTTC[GA]AT[CT]C[CT][CG][CGA][GT][CTA][GC][GA][GA][GA][GC][CA] -------------------------------------------------------------------------------- Time 315.28 secs. ******************************************************************************** ******************************************************************************** MOTIF GCSVRDTKGKTARRGCGYCWGACTNNWAA MEME-2 width = 29 sites = 58 llr = 1025 E-value = 1.4e-165 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCSVRDTKGKTARRGCGYCWGACTNNWAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1:13541:::1a53::1124:7::34488 pos.-specific C 385311:1:11:12:a:462218:22::: probability G 72323334861:45a:811282::3212: matrix T ::211264237:::::15231:2a225:2 bits 2.4 ** 2.1 ** 1.9 ** 1.6 * * ** ** Relative 1.4 * * * *** * ** Entropy 1.2 ** * * *** * ** * (25.5 bits) 0.9 ** * * *** * ** ** 0.7 ** * ********* **** ** 0.5 *** ************* **** ** 0.2 ******************* **** *** 0.0 ----------------------------- Multilevel GCCAAATGGGTAAGGCGTCAGACTAATAA consensus CGGCGGGT T GA C T GCAG sequence G T C CG TT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCSVRDTKGKTARRGCGYCWGACTNNWAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXV:353908-354313 - 16 2.11e-13 TGCTTCTATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrXIV:104602-105056 + 35 2.11e-13 AGCTTCTATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrX:58988-59362 - 10 2.11e-13 AGCTTCTATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGAT chrII:266183-266666 + 13 2.11e-13 TGCTTCTATG GCCAAGTTGGTAAGGCGCCACACTAGTAA TGTGGAGATC chrXVI:560018-560500 - 43 1.45e-11 AGCGGATTTA GCTCAGTTGGGAGAGCGCCAGACTGAAGA AAAAACTTCG chrXIV:374683-375091 + 41 1.45e-11 AGCGGACTTA GCTCAGTTGGGAGAGCGCCAGACTGAAGA AAAACTTCGG chrVIII:237758-238131 - 8 1.45e-11 AGCGGATTTA GCTCAGTTGGGAGAGCGCCAGACTGAAGA AAAAACT chrVII:440480-441071 - 45 1.45e-11 TGCGGATTTA GCTCAGTTGGGAGAGCGCCAGACTGAAGA AAAAACTTCG chrIV:1095156-1095665 - 64 1.45e-11 CGGACTTA GCTCAGTTGGGAGAGCGCCAGACTGAAGA AAAAACTTTG chrII:36239-36593 + 41 1.45e-11 AGCGGATTTA GCTCAGTTGGGAGAGCGCCAGACTGAAGA AAAACTTCGG chrX:414775-415214 + 31 3.20e-11 AGCCTTGTTG GCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrV:435570-436008 - 48 3.20e-11 AGCCTTGTTG GCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrIX:300098-300484 - 22 3.20e-11 AGCCTTGTTG GCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrIV:1201522-1202021 + 38 3.20e-11 AGCCTTGTTG GCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrIII:151118-151526 - 47 3.20e-11 AGCCTTGTTG GCGCAATCGGTAGCGCGTATGACTCTTAA TCATAAGGTT chrIV:359377-359783 + 56 2.33e-10 ATCCTTGTTA GCTCAGTTGGTAGAGCGTTCGGCTTTTAA GCGCATTTGC chrXIII:258930-259444 - 65 3.44e-10 CAACTTG GCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrXII:167784-168264 - 14 3.44e-10 TGGCAACTTG GCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrIV:437553-438081 + 14 3.44e-10 AGGCAACTTG GCCGAGTGGTTAAGGCGAAAGATTAGAAA TCTTTTGGGC chrXV:340003-340729 - 18 5.66e-10 GTTCCTCGTG GCCCAATGGTCACGGCGTCTGGCTACGAA CCAGAAGATT chrXI:490774-491222 + 29 5.66e-10 GTTCCTCGTG GCCCAATGGTCACGGCGTCTGGCTACGAA CCAGAAGATT chrX:233720-234148 + 64 5.66e-10 GTTCCTCGTG GCCCAATGGTCACGGCGTCTGGCTACGAA CCAGAAGA chrV:492172-492575 - 64 5.66e-10 TCCTCGTG GCCCAATGGTCACGGCGTCTGGCTACGAA CCAGAAGATT chrXIV:632402-632895 + 11 1.15e-09 GACTCCATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrXI:74416-74826 + 63 1.15e-09 GACTCCATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGAT chrVII:730971-731364 + 30 1.15e-09 GACTCCATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrIII:127513-127928 + 56 1.15e-09 GACTCCATGG CCAAGTTGGTTAAGGCGTGCGACTGTTAA TCGCAAGATC chrXIII:131657-132132 - 16 2.78e-09 TAGCTCGCGT GGCGTAATGGCAACGCGTCTGACTTCTAA TCAGAAGATT chrX:374182-374856 - 72 2.78e-09 . GGCGTAATGGCAACGCGTCTGACTTCTAA TCAGAAGATT chrVII:736189-736542 + 33 2.78e-09 TAGCTCGCGT GGCGTAATGGCAACGCGTCTGACTTCTAA TCAGAAGATT chrXII:962857-963250 - 14 3.81e-09 GGAGGGTTGG CCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrXI:83975-84455 + 53 3.81e-09 GGAGGGTTGG CCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrX:424240-424724 - 45 3.81e-09 GGAGGGTTGG CCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrIV:519655-519905 + 23 3.81e-09 GGAGGGTTGG CCGAGTGGTCTAAGGCGGCAGACTTAAGA TCTGTTGGAC chrIII:149720-150197 + 20 8.45e-09 TGAGCGCCGT GGCGCAGTGGAAGCGCGCAGGGCTCATAA CCCTGATGTC chrXIV:602051-602572 + 61 1.02e-08 GGTCTCTTGG CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrXIV:569673-570093 - 69 1.02e-08 TGG CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrXII:1051942-1052229 - 71 1.02e-08 G CCCAGTTGGTTAAGGCACCGTGCTAATAA CGCGGGGATC chrXVI:435671-436182 - 52 1.12e-08 AAGCTCGTAT GGCGCAGTGGTAGCGCAGCAGATTGCAAA TCTGTTGGTC chrII:642834-643250 - 50 1.12e-08 AAGCTCGTAT GGCGCAGTGGTAGCGCAGCAGATTGCAAA TCTGTTGGTC chrXV:274444-274989 + 16 1.35e-08 TGTCCCAGTG GCCGAGTGGTTAAGGCGATGCCCTGCTAT TTCCTCAGAA chrXIV:442770-443244 + 59 1.77e-08 GGTTGTTTGG CCGAGCGGTCTAAGGCGCCTGATTCAAGA AATATCTTGA chrX:422710-423141 + 71 1.77e-08 TGCTTCAGTA GCTCAGTAGGAAGAGCGTCAGTCTCATAA T chrX:390873-391338 - 23 1.77e-08 TGCTTCAGTA GCTCAGTAGGAAGAGCGTCAGTCTCATAA TCTGAAGGTC chrVII:422853-423375 + 38 1.77e-08 GGTTGTTTGG CCGAGCGGTCTAAGGCGCCTGATTCAAGA AATATCTTGA chrVII:205322-205770 + 35 1.77e-08 GGTTGTTTGG CCGAGCGGTCTAAGGCGCCTGATTCAAGA AATATCTTGA chrX:617700-618228 + 15 5.27e-08 GGGAGTTTGG CCGAGTGGTTTAAGGCGTCAGATTTAGGT GGATTTAACC chrXVI:744075-744583 + 13 9.69e-08 AAGCCTCCTT AGCTTAGTGGTAGAGCGTTGCACTTGTAA TGCAAAGGTC chrVII:1004038-1004432 + 39 9.69e-08 TTGCCTCCTT AGCTTAGTGGTAGAGCGTTGCACTTGTAA TGCAAAGGTC chrVII:661546-661986 + 41 9.69e-08 TTGCCTCCTT AGCTTAGTGGTAGAGCGTTGCACTTGTAA TGCAAAGGTC chrXI:302711-303192 + 25 1.71e-07 ATGAAGCGGT GGCTCAATGGTAGAGCTTTCGACTCCAAT TAAATCTTGG chrVII:878543-879054 - 31 1.71e-07 ATGAAGCGGT GGCTCAATGGTAGAGCTTTCGACTCCAAT TAAATCTTGG chrVII:287166-287654 - 59 1.71e-07 ATGAAGCGGT GGCTCAATGGTAGAGCTTTCGACTCCAAT TAAATCTTGG chrXII:605120-605627 - 72 2.09e-07 . GCTCAGTGGTTAGAGCTTCGTGCTTATAG CAACATTCGG chrXVI:856728-857171 + 12 4.44e-07 CGGGCGTGTG GCGTAGTCGGTAGCGCGCTCCCTTAGCAT GGGAGAGGTC chrXI:219718-220073 + 59 4.44e-07 AGGGCGTGTG GCGTAGTCGGTAGCGCGCTCCCTTAGCAT GGGAGAGGTC chrX:542797-543266 - 24 5.30e-07 TCTCGGTAGC CAAGTTGGTTTAAGGCGCAAGACTGTAAT TTATCACTAC chrVI:167225-167672 + 50 5.30e-07 TCTCGGTAGC CAAGTTGGTTTAAGGCGCAAGACTGTAAT TTACCACTAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCSVRDTKGKTARRGCGYCWGACTNNWAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:353908-354313 2.1e-13 15_[-2]_56 chrXIV:104602-105056 2.1e-13 34_[+2]_37 chrX:58988-59362 2.1e-13 9_[-2]_62 chrII:266183-266666 2.1e-13 12_[+2]_59 chrXVI:560018-560500 1.5e-11 42_[-2]_29 chrXIV:374683-375091 1.5e-11 40_[+2]_31 chrVIII:237758-238131 1.5e-11 7_[-2]_64 chrVII:440480-441071 1.5e-11 44_[-2]_27 chrIV:1095156-1095665 1.5e-11 63_[-2]_8 chrII:36239-36593 1.5e-11 40_[+2]_31 chrX:414775-415214 3.2e-11 30_[+2]_41 chrV:435570-436008 3.2e-11 47_[-2]_24 chrIX:300098-300484 3.2e-11 21_[-2]_50 chrIV:1201522-1202021 3.2e-11 37_[+2]_34 chrIII:151118-151526 3.2e-11 46_[-2]_25 chrIV:359377-359783 2.3e-10 55_[+2]_16 chrXIII:258930-259444 3.4e-10 64_[-2]_7 chrXII:167784-168264 3.4e-10 13_[-2]_58 chrIV:437553-438081 3.4e-10 13_[+2]_58 chrXV:340003-340729 5.7e-10 17_[-2]_54 chrXI:490774-491222 5.7e-10 28_[+2]_43 chrX:233720-234148 5.7e-10 63_[+2]_8 chrV:492172-492575 5.7e-10 63_[-2]_8 chrXIV:632402-632895 1.2e-09 10_[+2]_61 chrXI:74416-74826 1.2e-09 62_[+2]_9 chrVII:730971-731364 1.2e-09 29_[+2]_42 chrIII:127513-127928 1.2e-09 55_[+2]_16 chrXIII:131657-132132 2.8e-09 15_[-2]_56 chrX:374182-374856 2.8e-09 71_[-2] chrVII:736189-736542 2.8e-09 32_[+2]_39 chrXII:962857-963250 3.8e-09 13_[-2]_58 chrXI:83975-84455 3.8e-09 52_[+2]_19 chrX:424240-424724 3.8e-09 44_[-2]_27 chrIV:519655-519905 3.8e-09 22_[+2]_49 chrIII:149720-150197 8.4e-09 19_[+2]_52 chrXIV:602051-602572 1e-08 60_[+2]_11 chrXIV:569673-570093 1e-08 68_[-2]_3 chrXII:1051942-1052229 1e-08 70_[-2]_1 chrXVI:435671-436182 1.1e-08 51_[-2]_20 chrII:642834-643250 1.1e-08 49_[-2]_22 chrXV:274444-274989 1.3e-08 15_[+2]_56 chrXIV:442770-443244 1.8e-08 58_[+2]_13 chrX:422710-423141 1.8e-08 70_[+2]_1 chrX:390873-391338 1.8e-08 22_[-2]_49 chrVII:422853-423375 1.8e-08 37_[+2]_34 chrVII:205322-205770 1.8e-08 34_[+2]_37 chrX:617700-618228 5.3e-08 14_[+2]_57 chrXVI:744075-744583 9.7e-08 12_[+2]_59 chrVII:1004038-1004432 9.7e-08 38_[+2]_33 chrVII:661546-661986 9.7e-08 40_[+2]_31 chrXI:302711-303192 1.7e-07 24_[+2]_47 chrVII:878543-879054 1.7e-07 30_[-2]_41 chrVII:287166-287654 1.7e-07 58_[-2]_13 chrXII:605120-605627 2.1e-07 71_[-2] chrXVI:856728-857171 4.4e-07 11_[+2]_60 chrXI:219718-220073 4.4e-07 58_[+2]_13 chrX:542797-543266 5.3e-07 23_[-2]_48 chrVI:167225-167672 5.3e-07 49_[+2]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCSVRDTKGKTARRGCGYCWGACTNNWAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCSVRDTKGKTARRGCGYCWGACTNNWAA width=29 seqs=58 chrXV:353908-354313 ( 16) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrXIV:104602-105056 ( 35) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrX:58988-59362 ( 10) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrII:266183-266666 ( 13) GCCAAGTTGGTAAGGCGCCACACTAGTAA 1 chrXVI:560018-560500 ( 43) GCTCAGTTGGGAGAGCGCCAGACTGAAGA 1 chrXIV:374683-375091 ( 41) GCTCAGTTGGGAGAGCGCCAGACTGAAGA 1 chrVIII:237758-238131 ( 8) GCTCAGTTGGGAGAGCGCCAGACTGAAGA 1 chrVII:440480-441071 ( 45) GCTCAGTTGGGAGAGCGCCAGACTGAAGA 1 chrIV:1095156-1095665 ( 64) GCTCAGTTGGGAGAGCGCCAGACTGAAGA 1 chrII:36239-36593 ( 41) GCTCAGTTGGGAGAGCGCCAGACTGAAGA 1 chrX:414775-415214 ( 31) GCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrV:435570-436008 ( 48) GCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrIX:300098-300484 ( 22) GCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrIV:1201522-1202021 ( 38) GCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrIII:151118-151526 ( 47) GCGCAATCGGTAGCGCGTATGACTCTTAA 1 chrIV:359377-359783 ( 56) GCTCAGTTGGTAGAGCGTTCGGCTTTTAA 1 chrXIII:258930-259444 ( 65) GCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrXII:167784-168264 ( 14) GCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrIV:437553-438081 ( 14) GCCGAGTGGTTAAGGCGAAAGATTAGAAA 1 chrXV:340003-340729 ( 18) GCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrXI:490774-491222 ( 29) GCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrX:233720-234148 ( 64) GCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrV:492172-492575 ( 64) GCCCAATGGTCACGGCGTCTGGCTACGAA 1 chrXIV:632402-632895 ( 11) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrXI:74416-74826 ( 63) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrVII:730971-731364 ( 30) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrIII:127513-127928 ( 56) CCAAGTTGGTTAAGGCGTGCGACTGTTAA 1 chrXIII:131657-132132 ( 16) GGCGTAATGGCAACGCGTCTGACTTCTAA 1 chrX:374182-374856 ( 72) GGCGTAATGGCAACGCGTCTGACTTCTAA 1 chrVII:736189-736542 ( 33) GGCGTAATGGCAACGCGTCTGACTTCTAA 1 chrXII:962857-963250 ( 14) CCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrXI:83975-84455 ( 53) CCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrX:424240-424724 ( 45) CCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrIV:519655-519905 ( 23) CCGAGTGGTCTAAGGCGGCAGACTTAAGA 1 chrIII:149720-150197 ( 20) GGCGCAGTGGAAGCGCGCAGGGCTCATAA 1 chrXIV:602051-602572 ( 61) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrXIV:569673-570093 ( 69) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrXII:1051942-1052229 ( 71) CCCAGTTGGTTAAGGCACCGTGCTAATAA 1 chrXVI:435671-436182 ( 52) GGCGCAGTGGTAGCGCAGCAGATTGCAAA 1 chrII:642834-643250 ( 50) GGCGCAGTGGTAGCGCAGCAGATTGCAAA 1 chrXV:274444-274989 ( 16) GCCGAGTGGTTAAGGCGATGCCCTGCTAT 1 chrXIV:442770-443244 ( 59) CCGAGCGGTCTAAGGCGCCTGATTCAAGA 1 chrX:422710-423141 ( 71) GCTCAGTAGGAAGAGCGTCAGTCTCATAA 1 chrX:390873-391338 ( 23) GCTCAGTAGGAAGAGCGTCAGTCTCATAA 1 chrVII:422853-423375 ( 38) CCGAGCGGTCTAAGGCGCCTGATTCAAGA 1 chrVII:205322-205770 ( 35) CCGAGCGGTCTAAGGCGCCTGATTCAAGA 1 chrX:617700-618228 ( 15) CCGAGTGGTTTAAGGCGTCAGATTTAGGT 1 chrXVI:744075-744583 ( 13) AGCTTAGTGGTAGAGCGTTGCACTTGTAA 1 chrVII:1004038-1004432 ( 39) AGCTTAGTGGTAGAGCGTTGCACTTGTAA 1 chrVII:661546-661986 ( 41) AGCTTAGTGGTAGAGCGTTGCACTTGTAA 1 chrXI:302711-303192 ( 25) GGCTCAATGGTAGAGCTTTCGACTCCAAT 1 chrVII:878543-879054 ( 31) GGCTCAATGGTAGAGCTTTCGACTCCAAT 1 chrVII:287166-287654 ( 59) GGCTCAATGGTAGAGCTTTCGACTCCAAT 1 chrXII:605120-605627 ( 72) GCTCAGTGGTTAGAGCTTCGTGCTTATAG 1 chrXVI:856728-857171 ( 12) GCGTAGTCGGTAGCGCGCTCCCTTAGCAT 1 chrXI:219718-220073 ( 59) GCGTAGTCGGTAGCGCGCTCCCTTAGCAT 1 chrX:542797-543266 ( 24) CAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 chrVI:167225-167672 ( 50) CAAGTTGGTTTAAGGCGCAAGACTGTAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCSVRDTKGKTARRGCGYCWGACTNNWAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 40896 bayes= 9.34476 E= 1.4e-165 -256 59 175 -1250 -314 196 8 -1250 -156 125 41 -82 10 75 8 -114 71 -92 41 -114 25 -192 82 -34 -156 -1250 50 103 -314 -69 120 38 -1250 -1250 208 -82 -1250 -69 150 10 -256 -69 -92 125 171 -1250 -1250 -1250 66 -150 120 -1250 -14 20 136 -1250 -1250 -1250 236 -1250 -1250 236 -1250 -1250 -182 -1250 211 -214 -214 89 -92 61 -68 154 -150 -82 44 -18 -33 -24 -1250 -18 196 -214 128 -192 -18 -314 -1250 205 -1250 -68 -1250 -1250 -1250 171 -14 31 41 -44 25 20 8 -56 38 -250 -118 66 132 -1250 31 -1250 144 -1250 -350 -97 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCSVRDTKGKTARRGCGYCWGACTNNWAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 58 E= 1.4e-165 0.051724 0.293103 0.655172 0.000000 0.034483 0.758621 0.206897 0.000000 0.103448 0.465517 0.258621 0.172414 0.327586 0.327586 0.206897 0.137931 0.500000 0.103448 0.258621 0.137931 0.362069 0.051724 0.344828 0.241379 0.103448 0.000000 0.275862 0.620690 0.034483 0.120690 0.448276 0.396552 0.000000 0.000000 0.827586 0.172414 0.000000 0.120690 0.551724 0.327586 0.051724 0.120690 0.103448 0.724138 1.000000 0.000000 0.000000 0.000000 0.482759 0.068966 0.448276 0.000000 0.275862 0.224138 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.086207 0.000000 0.844828 0.068966 0.068966 0.362069 0.103448 0.465517 0.189655 0.568966 0.068966 0.172414 0.413793 0.172414 0.155172 0.258621 0.000000 0.172414 0.758621 0.068966 0.741379 0.051724 0.172414 0.034483 0.000000 0.810345 0.000000 0.189655 0.000000 0.000000 0.000000 1.000000 0.275862 0.241379 0.258621 0.224138 0.362069 0.224138 0.206897 0.206897 0.396552 0.034483 0.086207 0.482759 0.758621 0.000000 0.241379 0.000000 0.827586 0.000000 0.017241 0.155172 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCSVRDTKGKTARRGCGYCWGACTNNWAA MEME-2 regular expression -------------------------------------------------------------------------------- [GC][CG][CG][ACG][AG][AGT][TG][GT]G[GT]TA[AG][GAC]GCG[TC]C[AT]GACT[AGCT][ACGT][TA][AG]A -------------------------------------------------------------------------------- Time 615.58 secs. ******************************************************************************** ******************************************************************************** MOTIF WHACCACTASACCACDHRMMC MEME-3 width = 21 sites = 36 llr = 561 E-value = 7.5e-058 ******************************************************************************** -------------------------------------------------------------------------------- Motif WHACCACTASACCACDHRMMC MEME-3 Description -------------------------------------------------------------------------------- Simplified A 657:163:929::a152333: pos.-specific C :33a7372:5:a8:7:4265a probability G ::::2:::131::::325:2: matrix T 43:::1:8::::2:233:1:: bits 2.4 * * * 2.1 * * * 1.9 * * * 1.6 * * * * Relative 1.4 * *** * Entropy 1.2 * *** **** * (22.5 bits) 0.9 *** *** ***** * 0.7 * *** ********* **** 0.5 *************** **** 0.2 **************** **** 0.0 --------------------- Multilevel AAACCACTACACCACACGCCC consensus TCC CAC G TGTAAA sequence T TA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHACCACTASACCACDHRMMC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIII:195938-196303 + 80 5.47e-12 AGCGAGAATC ATACCACTAGACCACACGCCC chrI:138946-139366 - 46 5.47e-12 AGCGAGAATC ATACCACTAGACCACACGCCC GTACTAATTG chrXIV:631667-632125 + 51 3.43e-10 AGCGAGAATC ATACCTCTAGACCACACGCCC GGTAGAAGTT chrXII:656845-657204 + 12 4.73e-10 GGGAGCGCGC TACCGACTACGCCACACGCCC AATTTTCTTG chrXI:666607-666801 - 47 1.17e-09 ACACCCACAC ACACCCACACACCACACACCC ACACACCACA chrXIII:5443-5663 + 40 3.93e-09 ATATACACCC ACACCCACACACCACACCCAC ACCCACACAC chrXI:2-179 + 8 3.93e-09 ACACACC ACACCCACACACCACACCCAC TACTCTAACC chrVIII:562348-562592 - 38 3.93e-09 ACACACACCC ACACCCACACACCACACCCAC ACTTTTCACA chrIV:12-224 + 50 3.93e-09 CACCACACCC ACACCCACACACCACACCCAC ACCCACACAC chrXVI:860128-860708 - 11 5.03e-09 ACGTTGGATT TTACCACTAAACCACTTGCGC TTGTTATTTA chrXV:281985-282438 - 3 5.03e-09 ACGTTGGATT TTACCACTAAACCACTTGCGC GC chrXV:226421-226931 + 35 5.03e-09 ACGTTGGATT TTACCACTAAACCACTTGCGC TGAATTTCTT chrX:396595-396948 + 55 5.03e-09 ACGTTGGATT TTACCACTAAACCACTTGCGC TTACTTTTGA chrVI:162017-162385 - 77 5.03e-09 ATT TTACCACTAAACCACTTGCGC TTGTTTTCTT chrIII:142604-142983 + 8 5.03e-09 TTGGATT TTACCACTAAACCACTTGCGC TAGTAATCTT chrXIII:808120-808557 + 9 9.08e-09 GAAAGTGA TAACCACTACACTATAGGACC TTTTTCTTCT chrXI:307938-308505 + 26 9.08e-09 CAGATGCCAT AACCGACTAGACCACGAAACC ACTTAATTGT chrX:378213-378595 - 6 9.08e-09 CAGATGCCAT AACCGACTAGACCACGAAACC TATTA chrVII:823333-823726 - 3 9.08e-09 CAGATGCCAT AACCGACTAGACCACGAAACC AC chrV:469233-469687 - 47 9.08e-09 CAGATGCCAT AACCGACTAGACCACGAAACC AATTATTTCT chrV:438529-438930 - 21 9.08e-09 CAGATGCCAT AACCGACTAGACCACGAAACC TAATTTGTTG chrIV:802566-803038 + 30 9.08e-09 CCGAAAGTGA TAACCACTACACTATAGGACC GACAATTCAT chrV:130835-131408 + 62 3.57e-08 CCGAAAGTGA TAACCACTACACTATAAAACC TCTTAATTAT chrII:350621-351068 - 33 3.57e-08 CCGAAAGTGA TAACCACTACACTATAAAACC CTTTTATTGA chrXIV:783746-784327 - 56 5.22e-08 ACACCCACAC ACCCACACACACCACACCCAC ACACTACCCT chrIII:73-607 + 24 5.22e-08 ACACACCCAC ACCCACACACACCACACCCAC ACCACACCCA chrXV:110853-111208 + 33 5.72e-08 GGTGGGATGA TAACCACTACACTAACCGCCC GGGTTAATTG chrIV:411264-411671 + 16 1.25e-07 GAAACAAATC AAACACCCACACCCCGGGCAC CCAAAGTCCC chrXV:639152-639442 - 62 1.87e-07 GACTACTTTT ACACCCGTACACCACACATAC AACCGTACGA chrVII:794203-794573 - 79 2.73e-07 C TACCAACTGCGCCATGTGCCC GCAATCTATG chrXVI:188549-188930 - 47 7.10e-07 TTAAGACCGG AAACCTCTACACCAGTTCTCC TTCTGCAAGG chrIV:1150692-1151165 + 43 8.54e-07 GGCATCGCCT TAACCACTCGGCCACTGGGAC TGAAACACTT chrVII:726410-726768 + 48 1.15e-06 AATTAACTGT ACACCCATACCCTATATACAC CCATACCCTA chrXII:734590-734967 - 74 1.78e-06 TGCCTT AACCAACTGGGCCAAGAGACC AAACTTTGTT chrIV:1075280-1075733 + 68 2.08e-06 GGCAACGTGA TAGCCGCTACACTATTGGAAC AATATTACGG chrVII:706660-707186 - 63 2.93e-06 AGCCCTATAT TACCGTATAGACAATGGGCGC GTCCCTAAAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHACCACTASACCACDHRMMC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIII:195938-196303 5.5e-12 79_[+3] chrI:138946-139366 5.5e-12 45_[-3]_34 chrXIV:631667-632125 3.4e-10 50_[+3]_29 chrXII:656845-657204 4.7e-10 11_[+3]_68 chrXI:666607-666801 1.2e-09 46_[-3]_33 chrXIII:5443-5663 3.9e-09 39_[+3]_40 chrXI:2-179 3.9e-09 7_[+3]_72 chrVIII:562348-562592 3.9e-09 37_[-3]_42 chrIV:12-224 3.9e-09 49_[+3]_30 chrXVI:860128-860708 5e-09 10_[-3]_69 chrXV:281985-282438 5e-09 2_[-3]_77 chrXV:226421-226931 5e-09 34_[+3]_45 chrX:396595-396948 5e-09 54_[+3]_25 chrVI:162017-162385 5e-09 76_[-3]_3 chrIII:142604-142983 5e-09 7_[+3]_72 chrXIII:808120-808557 9.1e-09 8_[+3]_71 chrXI:307938-308505 9.1e-09 25_[+3]_54 chrX:378213-378595 9.1e-09 5_[-3]_74 chrVII:823333-823726 9.1e-09 2_[-3]_77 chrV:469233-469687 9.1e-09 46_[-3]_33 chrV:438529-438930 9.1e-09 20_[-3]_59 chrIV:802566-803038 9.1e-09 29_[+3]_50 chrV:130835-131408 3.6e-08 61_[+3]_18 chrII:350621-351068 3.6e-08 32_[-3]_47 chrXIV:783746-784327 5.2e-08 55_[-3]_24 chrIII:73-607 5.2e-08 23_[+3]_56 chrXV:110853-111208 5.7e-08 32_[+3]_47 chrIV:411264-411671 1.3e-07 15_[+3]_64 chrXV:639152-639442 1.9e-07 61_[-3]_18 chrVII:794203-794573 2.7e-07 78_[-3]_1 chrXVI:188549-188930 7.1e-07 46_[-3]_33 chrIV:1150692-1151165 8.5e-07 42_[+3]_37 chrVII:726410-726768 1.1e-06 47_[+3]_32 chrXII:734590-734967 1.8e-06 73_[-3]_6 chrIV:1075280-1075733 2.1e-06 67_[+3]_12 chrVII:706660-707186 2.9e-06 62_[-3]_17 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHACCACTASACCACDHRMMC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WHACCACTASACCACDHRMMC width=21 seqs=36 chrXIII:195938-196303 ( 80) ATACCACTAGACCACACGCCC 1 chrI:138946-139366 ( 46) ATACCACTAGACCACACGCCC 1 chrXIV:631667-632125 ( 51) ATACCTCTAGACCACACGCCC 1 chrXII:656845-657204 ( 12) TACCGACTACGCCACACGCCC 1 chrXI:666607-666801 ( 47) ACACCCACACACCACACACCC 1 chrXIII:5443-5663 ( 40) ACACCCACACACCACACCCAC 1 chrXI:2-179 ( 8) ACACCCACACACCACACCCAC 1 chrVIII:562348-562592 ( 38) ACACCCACACACCACACCCAC 1 chrIV:12-224 ( 50) ACACCCACACACCACACCCAC 1 chrXVI:860128-860708 ( 11) TTACCACTAAACCACTTGCGC 1 chrXV:281985-282438 ( 3) TTACCACTAAACCACTTGCGC 1 chrXV:226421-226931 ( 35) TTACCACTAAACCACTTGCGC 1 chrX:396595-396948 ( 55) TTACCACTAAACCACTTGCGC 1 chrVI:162017-162385 ( 77) TTACCACTAAACCACTTGCGC 1 chrIII:142604-142983 ( 8) TTACCACTAAACCACTTGCGC 1 chrXIII:808120-808557 ( 9) TAACCACTACACTATAGGACC 1 chrXI:307938-308505 ( 26) AACCGACTAGACCACGAAACC 1 chrX:378213-378595 ( 6) AACCGACTAGACCACGAAACC 1 chrVII:823333-823726 ( 3) AACCGACTAGACCACGAAACC 1 chrV:469233-469687 ( 47) AACCGACTAGACCACGAAACC 1 chrV:438529-438930 ( 21) AACCGACTAGACCACGAAACC 1 chrIV:802566-803038 ( 30) TAACCACTACACTATAGGACC 1 chrV:130835-131408 ( 62) TAACCACTACACTATAAAACC 1 chrII:350621-351068 ( 33) TAACCACTACACTATAAAACC 1 chrXIV:783746-784327 ( 56) ACCCACACACACCACACCCAC 1 chrIII:73-607 ( 24) ACCCACACACACCACACCCAC 1 chrXV:110853-111208 ( 33) TAACCACTACACTAACCGCCC 1 chrIV:411264-411671 ( 16) AAACACCCACACCCCGGGCAC 1 chrXV:639152-639442 ( 62) ACACCCGTACACCACACATAC 1 chrVII:794203-794573 ( 79) TACCAACTGCGCCATGTGCCC 1 chrXVI:188549-188930 ( 47) AAACCTCTACACCAGTTCTCC 1 chrIV:1150692-1151165 ( 43) TAACCACTCGGCCACTGGGAC 1 chrVII:726410-726768 ( 48) ACACCCATACCCTATATACAC 1 chrXII:734590-734967 ( 74) AACCAACTGGGCCAAGAGACC 1 chrIV:1075280-1075733 ( 68) TAGCCGCTACACTATTGGAAC 1 chrVII:706660-707186 ( 63) TACCGTATAGACAATGGGCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHACCACTASACCACDHRMMC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 45440 bayes= 11.1491 E= 7.5e-058 87 -1181 -1181 54 71 36 -1181 -29 113 65 -281 -1181 -1181 236 -1181 -1181 -113 177 -1 -1181 100 51 -281 -187 -29 189 -281 -1181 -1181 19 -1181 135 159 -281 -181 -1181 -87 143 65 -1181 150 -281 -81 -1181 -1181 236 -1181 -1181 -345 199 -1181 -65 167 -281 -1181 -1181 -245 183 -281 -46 63 -281 36 -29 -46 89 -23 -29 -13 -1 143 -1181 0 165 -281 -245 0 136 -1 -1181 -1181 236 -1181 -1181 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHACCACTASACCACDHRMMC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 36 E= 7.5e-058 0.555556 0.000000 0.000000 0.444444 0.500000 0.250000 0.000000 0.250000 0.666667 0.305556 0.027778 0.000000 0.000000 1.000000 0.000000 0.000000 0.138889 0.666667 0.194444 0.000000 0.611111 0.277778 0.027778 0.083333 0.250000 0.722222 0.027778 0.000000 0.000000 0.222222 0.000000 0.777778 0.916667 0.027778 0.055556 0.000000 0.166667 0.527778 0.305556 0.000000 0.861111 0.027778 0.111111 0.000000 0.000000 1.000000 0.000000 0.000000 0.027778 0.777778 0.000000 0.194444 0.972222 0.027778 0.000000 0.000000 0.055556 0.694444 0.027778 0.222222 0.472222 0.027778 0.250000 0.250000 0.222222 0.361111 0.166667 0.250000 0.277778 0.194444 0.527778 0.000000 0.305556 0.611111 0.027778 0.055556 0.305556 0.500000 0.194444 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WHACCACTASACCACDHRMMC MEME-3 regular expression -------------------------------------------------------------------------------- [AT][ACT][AC]CC[AC][CA][TC]A[CG]ACCA[CT][AGT][CTA][GA][CA][CA]C -------------------------------------------------------------------------------- Time 893.73 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:71797-73275 6.90e-01 100 chrI:81906-82390 4.29e-01 100 chrI:130939-132025 4.37e-01 100 chrI:138946-139366 1.47e-08 45_[-3(5.47e-12)]_34 chrI:141144-144358 3.12e-01 100 chrI:166174-166589 9.68e-01 100 chrI:181122-181485 2.36e-01 100 chrI:182130-183219 8.33e-01 100 chrII:9457-10184 9.68e-01 100 chrII:36239-36593 5.38e-10 40_[+2(1.45e-11)]_31 chrII:44827-45351 9.89e-01 100 chrII:59825-61638 8.99e-01 100 chrII:87917-88563 8.59e-01 100 chrII:88955-90432 1.09e-01 12_[+2(9.31e-05)]_59 chrII:139228-139932 4.20e-01 100 chrII:165074-165598 6.15e-01 100 chrII:167891-168221 3.32e-01 100 chrII:168443-169434 8.44e-01 100 chrII:181349-181970 9.40e-01 100 chrII:197256-197856 7.90e-09 31_[+1(1.26e-12)]_40 chrII:226976-227332 7.93e-02 22_[+1(6.61e-05)]_49 chrII:266183-266666 8.72e-18 12_[+2(2.11e-13)]_5_[+1(3.33e-10)]_\ 25 chrII:290776-292313 2.30e-01 100 chrII:326390-327108 9.93e-01 100 chrII:332279-333017 4.43e-01 100 chrII:347427-347941 2.54e-05 19_[-1(3.44e-08)]_52 chrII:350621-351068 1.32e-05 32_[-3(3.57e-08)]_47 chrII:373880-375740 8.85e-01 100 chrII:380935-381521 4.47e-01 100 chrII:393446-394772 8.90e-01 100 chrII:405682-406332 1.16e-06 44_[+1(2.68e-10)]_27 chrII:415509-416679 3.97e-01 100 chrII:443858-445422 5.41e-01 100 chrII:445727-445902 5.45e-03 62_[-1(4.95e-06)]_9 chrII:592273-593471 3.65e-02 1_[+2(3.43e-05)]_70 chrII:603732-607101 5.72e-01 100 chrII:642834-643250 1.41e-12 15_[-1(4.32e-09)]_5_[-2(1.12e-08)]_\ 22 chrII:644937-645401 9.51e-02 100 chrIII:73-607 7.46e-05 [+3(4.40e-05)]_2_[+3(5.22e-08)]_17_\ [+3(2.48e-05)]_18 chrIII:839-1052 9.49e-01 100 chrIII:38878-39431 5.66e-01 100 chrIII:48856-49970 5.70e-01 100 chrIII:78405-78852 2.71e-01 100 chrIII:82384-82653 1.60e-01 100 chrIII:90849-91135 4.18e-01 100 chrIII:107066-107813 9.55e-01 100 chrIII:123160-123814 5.61e-01 100 chrIII:127513-127928 1.38e-06 55_[+2(1.15e-09)]_16 chrIII:137230-137554 9.08e-01 100 chrIII:137792-138983 2.85e-01 100 chrIII:142604-142983 4.51e-05 7_[+3(5.03e-09)]_72 chrIII:149720-150197 1.43e-07 19_[+2(8.45e-09)]_5_[+1(1.61e-05)]_\ 18 chrIII:151118-151526 1.64e-17 12_[-1(4.57e-13)]_5_[-2(3.20e-11)]_\ 25 chrIII:163484-163878 6.97e-02 5_[-3(7.06e-05)]_74 chrIII:168073-168556 1.88e-06 37_[-1(2.99e-10)]_34 chrIII:177234-178775 9.09e-01 100 chrIII:227754-228517 8.35e-01 100 chrIII:295304-295883 5.40e-01 100 chrIII:315605-316027 8.28e-02 100 chrIII:316233-316593 2.67e-01 100 chrIV:12-224 3.38e-05 13_[+3(2.93e-06)]_15_[+3(3.93e-09)]_\ 30 chrIV:45192-46142 2.25e-01 100 chrIV:83349-84128 9.28e-01 100 chrIV:117148-118218 8.83e-01 100 chrIV:118426-118786 9.76e-01 100 chrIV:129136-131007 9.55e-01 100 chrIV:216569-217825 9.96e-01 100 chrIV:221709-222374 6.03e-01 100 chrIV:229448-230774 9.56e-01 100 chrIV:307997-308392 8.78e-01 100 chrIV:321628-321959 1.97e-01 100 chrIV:340622-341818 5.70e-01 100 chrIV:342042-342374 7.50e-01 100 chrIV:358060-358477 4.63e-01 100 chrIV:359377-359783 5.63e-07 55_[+2(2.33e-10)]_16 chrIV:410167-410798 6.60e-01 100 chrIV:411264-411671 4.12e-04 15_[+3(1.25e-07)]_7_[+3(4.87e-05)]_\ 36 chrIV:416009-417364 7.85e-01 100 chrIV:433838-435088 7.53e-01 100 chrIV:437553-438081 1.80e-09 13_[+2(3.44e-10)]_14_[+1(6.61e-05)]_\ 15 chrIV:465194-467556 3.80e-01 100 chrIV:488382-489107 8.50e-01 100 chrIV:490658-492904 7.64e-01 100 chrIV:519655-519905 2.28e-11 22_[+2(3.81e-09)]_12_[-1(3.44e-08)]_\ 8 chrIV:520722-521436 7.65e-01 100 chrIV:555753-556667 2.13e-01 100 chrIV:568668-569368 1.41e-06 37_[+1(2.68e-10)]_34 chrIV:578739-580687 3.31e-01 100 chrIV:600792-601984 2.62e-01 100 chrIV:619722-620195 2.68e-06 61_[-1(1.36e-09)]_10 chrIV:644933-645372 4.01e-06 51_[-1(2.99e-10)]_20 chrIV:667709-668263 3.12e-08 71_[-1(1.26e-12)] chrIV:764960-765640 3.19e-02 100 chrIV:769051-770024 8.93e-02 100 chrIV:802566-803038 6.24e-06 29_[+3(9.08e-09)]_50 chrIV:806060-806745 7.84e-02 100 chrIV:808318-810044 5.29e-01 100 chrIV:835752-837984 1.86e-01 100 chrIV:884255-884654 2.01e-06 59_[+1(4.32e-09)]_12 chrIV:890388-893914 3.22e-01 100 chrIV:946130-946616 7.64e-02 100 chrIV:973700-974742 9.77e-01 100 chrIV:980704-981154 1.00e+00 100 chrIV:992723-993363 9.31e-01 100 chrIV:1013509-1013980 8.38e-01 100 chrIV:1016965-1017491 8.44e-08 29_[-1(1.08e-10)]_42 chrIV:1075280-1075733 2.19e-10 16_[-1(2.11e-11)]_22_[+3(2.08e-06)]_\ 12 chrIV:1095156-1095665 1.68e-12 10_[-1(1.12e-08)]_24_[-2(1.45e-11)]_\ 8 chrIV:1150692-1151165 2.76e-04 42_[+3(8.54e-07)]_37 chrIV:1162942-1164597 2.32e-01 100 chrIV:1175742-1176546 9.06e-01 100 chrIV:1201522-1202021 1.64e-17 37_[+2(3.20e-11)]_5_[+1(4.57e-13)] chrIV:1236536-1238517 8.99e-01 100 chrIV:1256582-1257281 7.76e-01 100 chrIV:1300856-1301338 1.20e-01 100 chrIV:1305408-1305775 8.21e-01 100 chrIV:1306022-1306178 6.57e-01 100 chrIV:1351025-1353053 3.12e-02 64_[+2(1.13e-05)]_7 chrIV:1354730-1356094 7.56e-02 100 chrIV:1359421-1361040 5.76e-01 100 chrIV:1401099-1402781 4.22e-01 100 chrIV:1450723-1451880 7.39e-01 100 chrIV:1461438-1461851 6.31e-01 100 chrIX:68263-68500 9.92e-01 100 chrIX:69116-69572 4.18e-01 100 chrIX:98560-99342 1.83e-01 100 chrIX:99635-100370 4.68e-01 100 chrIX:174532-175204 6.91e-01 100 chrIX:183117-183716 9.99e-01 100 chrIX:197408-198413 9.26e-01 100 chrIX:210655-211855 4.48e-01 100 chrIX:248557-249015 9.27e-01 100 chrIX:249178-249344 7.60e-01 100 chrIX:254227-254561 1.37e-02 57_[-3(5.39e-05)]_22 chrIX:255016-255854 4.73e-01 100 chrIX:256014-256989 7.31e-02 100 chrIX:257365-258173 5.31e-01 100 chrIX:300098-300484 5.99e-08 21_[-2(3.20e-11)]_50 chrIX:323759-324386 6.68e-01 100 chrIX:325738-326125 5.36e-01 100 chrIX:336018-336631 8.83e-01 100 chrIX:370238-370852 4.77e-01 100 chrIX:391099-392503 1.67e-01 100 chrV:53513-54015 2.38e-01 100 chrV:61119-62156 5.39e-01 100 chrV:67160-69359 6.63e-02 100 chrV:85114-86991 2.11e-01 100 chrV:99849-100308 9.91e-01 100 chrV:117439-118296 6.77e-01 100 chrV:130835-131408 3.26e-11 11_[-1(7.61e-10)]_21_[+3(3.57e-08)]_\ 18 chrV:135237-136096 9.58e-01 100 chrV:138470-139940 4.82e-01 100 chrV:140208-140908 1.01e-01 100 chrV:176876-177463 5.55e-07 21_[+1(4.57e-10)]_50 chrV:207355-208156 7.83e-01 100 chrV:221902-223017 9.11e-01 100 chrV:225475-225699 5.20e-01 100 chrV:249607-250512 5.92e-01 100 chrV:269203-269878 2.81e-01 100 chrV:270079-271103 6.14e-01 100 chrV:288152-288749 1.14e-01 43_[-1(8.86e-05)]_28 chrV:305816-307409 1.56e-01 100 chrV:311727-312280 2.51e-07 70_[-1(2.41e-11)]_1 chrV:354700-355359 4.27e-01 100 chrV:362059-362483 9.72e-01 100 chrV:363688-365446 7.60e-01 100 chrV:395949-398058 7.36e-01 100 chrV:423062-423606 9.47e-01 100 chrV:431028-431915 8.84e-01 100 chrV:434388-434977 6.41e-01 100 chrV:435570-436008 1.64e-17 13_[-1(4.57e-13)]_5_[-2(3.20e-11)]_\ 24 chrV:438529-438930 1.22e-11 20_[-3(9.08e-09)]_23_[+1(1.92e-10)]_\ 7 chrV:441811-442686 6.34e-01 100 chrV:443057-443359 1.07e-08 44_[-1(1.26e-12)]_27 chrV:469233-469687 7.34e-05 46_[-3(9.08e-09)]_33 chrV:487213-487749 7.86e-01 100 chrV:492172-492575 2.35e-12 29_[-1(1.36e-09)]_5_[-2(5.66e-10)]_\ 8 chrV:551029-551547 9.66e-09 47_[-1(1.26e-12)]_24 chrVI:63984-65427 7.79e-01 100 chrVI:95473-95919 6.69e-02 100 chrVI:100992-103081 8.83e-01 100 chrVI:104837-107025 7.62e-02 100 chrVI:136952-137712 1.24e-01 3_[-1(8.40e-05)]_68 chrVI:157848-158233 9.19e-01 100 chrVI:162017-162385 4.90e-05 76_[-3(5.03e-09)]_3 chrVI:167225-167672 1.26e-03 49_[+2(5.30e-07)]_22 chrVI:180633-181270 4.80e-01 100 chrVI:191195-191772 3.71e-01 100 chrVI:210325-211174 9.44e-01 100 chrVI:220054-222250 3.40e-01 100 chrVI:223235-224157 9.33e-01 100 chrVI:226416-227271 8.79e-01 100 chrVII:264-968 7.35e-01 100 chrVII:110374-110786 6.25e-01 100 chrVII:115338-115758 3.49e-07 55_[+1(2.15e-10)]_16 chrVII:122065-123167 8.73e-01 100 chrVII:148147-149543 9.41e-01 100 chrVII:185355-185906 3.66e-01 100 chrVII:205322-205770 1.31e-06 34_[+2(1.77e-08)]_37 chrVII:254126-254690 7.22e-01 100 chrVII:276985-278690 1.09e-01 100 chrVII:287166-287654 3.72e-04 58_[-2(1.71e-07)]_13 chrVII:310393-312082 8.36e-01 100 chrVII:319249-320130 3.84e-01 100 chrVII:328403-329370 9.92e-01 100 chrVII:345853-346623 1.77e-01 100 chrVII:364880-366646 7.10e-01 100 chrVII:371290-371561 3.44e-02 100 chrVII:398010-398247 1.20e-01 100 chrVII:398590-400121 5.74e-01 100 chrVII:401360-401619 9.99e-01 100 chrVII:405458-406051 9.79e-01 100 chrVII:411639-412576 2.53e-01 100 chrVII:422853-423375 1.31e-06 37_[+2(1.77e-08)]_34 chrVII:437300-439963 1.06e-01 100 chrVII:440480-441071 5.32e-10 44_[-2(1.45e-11)]_27 chrVII:479140-482680 6.45e-01 100 chrVII:483367-483763 8.67e-01 100 chrVII:531396-532003 3.62e-06 2_[+1(2.68e-10)]_69 chrVII:533844-535188 8.17e-01 100 chrVII:541714-542139 6.82e-06 15_[+1(4.57e-10)]_56 chrVII:544067-545980 6.92e-01 100 chrVII:555127-555860 8.48e-02 100 chrVII:648747-649353 1.13e-01 100 chrVII:661546-661986 1.16e-05 40_[+2(9.69e-08)]_31 chrVII:700380-701245 8.49e-01 100 chrVII:706660-707186 1.18e-03 62_[-3(2.93e-06)]_17 chrVII:726410-726768 3.86e-03 47_[+3(1.15e-06)]_32 chrVII:730971-731364 7.88e-12 29_[+2(1.15e-09)]_5_[+1(6.01e-09)]_\ 8 chrVII:736189-736542 6.43e-14 32_[+2(2.78e-09)]_5_[+1(6.89e-10)]_\ 5 chrVII:738828-739603 5.70e-10 [+1(1.26e-12)]_27_[+3(5.77e-05)]_23 chrVII:770706-773367 4.82e-01 100 chrVII:773867-774729 9.76e-01 100 chrVII:779406-779956 4.11e-07 26_[+1(1.92e-10)]_45 chrVII:788128-788748 2.20e-01 100 chrVII:794203-794573 1.02e-03 78_[-3(2.73e-07)]_1 chrVII:798512-799836 1.79e-01 100 chrVII:806434-808283 9.91e-01 100 chrVII:809566-809997 1.24e-02 65_[-1(5.78e-05)]_6 chrVII:823333-823726 1.13e-11 2_[-3(9.08e-09)]_23_[+1(1.92e-10)]_\ 25 chrVII:828350-828972 2.72e-01 100 chrVII:845452-846054 8.93e-01 100 chrVII:856632-857677 7.46e-01 100 chrVII:876188-878146 7.75e-01 100 chrVII:878543-879054 3.72e-04 30_[-2(1.71e-07)]_41 chrVII:882775-884280 7.13e-01 100 chrVII:914432-916731 6.90e-02 100 chrVII:930735-931648 8.94e-01 100 chrVII:1000340-1000593 5.95e-01 100 chrVII:1004038-1004432 1.16e-05 38_[+2(9.69e-08)]_33 chrVIII:34476-36100 7.22e-02 77_[+3(7.81e-05)]_2 chrVIII:62451-62912 6.71e-01 100 chrVIII:74731-75928 6.06e-01 100 chrVIII:103540-105259 1.67e-01 100 chrVIII:115798-116380 3.05e-06 68_[-1(3.33e-10)]_3 chrVIII:125900-126314 8.11e-01 100 chrVIII:132327-133112 1.77e-01 19_[+3(9.84e-05)]_60 chrVIII:134144-134765 7.93e-01 100 chrVIII:145854-146477 9.52e-01 100 chrVIII:148952-149443 6.90e-01 100 chrVIII:174926-175724 6.11e-01 100 chrVIII:237758-238131 2.17e-10 7_[-2(1.45e-11)]_64 chrVIII:271886-272438 4.88e-01 100 chrVIII:296769-297256 2.53e-01 100 chrVIII:358212-358787 2.20e-04 29_[-1(4.44e-08)]_42 chrVIII:381479-382366 7.35e-01 100 chrVIII:382735-383353 2.69e-02 100 chrVIII:388654-389010 7.65e-02 100 chrVIII:451004-453017 6.32e-01 100 chrVIII:466835-467313 1.08e-04 7_[+1(8.92e-09)]_64 chrVIII:475481-475900 8.65e-08 66_[-1(2.11e-11)]_5 chrVIII:505810-506213 3.33e-01 100 chrVIII:555783-556921 4.10e-01 100 chrVIII:562348-562592 9.98e-06 37_[-3(3.93e-09)]_10_[-3(3.93e-09)]_\ 11 chrX:58988-59362 5.46e-11 9_[-2(2.11e-13)]_62 chrX:73392-74741 7.38e-01 100 chrX:74913-75743 2.72e-01 100 chrX:90009-90448 1.78e-01 100 chrX:115845-116267 6.79e-01 100 chrX:120333-121884 3.18e-02 49_[+3(4.70e-05)]_30 chrX:139283-140388 3.58e-01 100 chrX:157420-157820 4.80e-01 100 chrX:165749-169598 8.00e-01 100 chrX:196336-197451 5.52e-01 100 chrX:204548-205033 1.41e-06 36_[+1(2.68e-10)]_35 chrX:227747-228593 3.40e-01 100 chrX:233720-234148 3.12e-06 63_[+2(5.66e-10)]_8 chrX:353985-354464 2.26e-01 100 chrX:355176-355777 1.35e-06 71_[+1(2.68e-10)] chrX:374182-374856 1.57e-11 37_[-1(6.89e-10)]_5_[-2(2.78e-09)] chrX:378213-378595 1.18e-11 5_[-3(9.08e-09)]_23_[+1(1.92e-10)]_\ 22 chrX:380401-381610 6.71e-01 100 chrX:390873-391338 1.71e-06 22_[-2(1.77e-08)]_49 chrX:391516-392117 3.92e-01 100 chrX:396595-396948 1.64e-13 5_[-1(5.14e-12)]_20_[+3(5.03e-09)]_\ 25 chrX:414775-415214 1.64e-17 30_[+2(3.20e-11)]_5_[+1(4.57e-13)]_\ 7 chrX:415728-416225 7.40e-05 5_[-1(2.30e-08)]_66 chrX:422710-423141 5.25e-06 70_[+2(1.77e-08)]_1 chrX:424240-424724 2.28e-11 3_[+1(3.44e-08)]_12_[-2(3.81e-09)]_\ 27 chrX:517637-518176 2.01e-01 100 chrX:519737-522582 2.50e-01 100 chrX:522938-524447 8.59e-01 100 chrX:531581-532260 4.85e-01 100 chrX:538031-538797 9.11e-01 100 chrX:540714-542482 1.45e-06 1_[+1(2.68e-10)]_70 chrX:542797-543266 1.26e-03 23_[-2(5.30e-07)]_48 chrX:545453-545731 1.09e-01 100 chrX:607883-608174 3.79e-01 100 chrX:617700-618228 8.04e-07 14_[+2(5.27e-08)]_57 chrX:647656-649151 7.52e-01 100 chrX:651256-651730 4.88e-01 100 chrX:651904-652605 5.57e-01 100 chrX:652767-653099 5.45e-01 100 chrX:663350-664487 8.67e-01 100 chrX:703250-703720 2.40e-01 100 chrX:745074-745749 2.37e-02 100 chrXI:2-179 9.47e-06 7_[+3(3.93e-09)]_72 chrXI:767-1064 9.04e-01 100 chrXI:46711-47003 7.17e-01 100 chrXI:67797-68272 1.06e-01 100 chrXI:74416-74826 6.40e-07 62_[+2(1.15e-09)]_9 chrXI:83975-84455 7.16e-07 52_[+2(3.81e-09)]_19 chrXI:99719-99995 5.51e-02 100 chrXI:100662-105661 6.44e-01 100 chrXI:108748-110140 5.18e-01 100 chrXI:140806-141485 9.75e-01 100 chrXI:141726-142814 1.35e-01 100 chrXI:158232-159626 9.75e-01 100 chrXI:162248-162716 4.43e-07 55_[-1(6.89e-10)]_16 chrXI:163450-164781 9.95e-02 100 chrXI:202383-203254 2.58e-01 100 chrXI:219718-220073 5.62e-10 49_[-3(4.73e-10)]_30 chrXI:282834-284433 9.39e-01 100 chrXI:302711-303192 3.72e-04 24_[+2(1.71e-07)]_47 chrXI:307938-308505 7.34e-05 25_[+3(9.08e-09)]_54 chrXI:313227-314018 2.91e-01 100 chrXI:326441-327548 3.40e-01 100 chrXI:334147-334931 5.22e-01 100 chrXI:382152-382453 6.70e-02 100 chrXI:431375-432304 9.58e-01 100 chrXI:457950-458856 9.99e-01 100 chrXI:490774-491222 2.35e-12 28_[+2(5.66e-10)]_5_[+1(1.36e-09)]_\ 9 chrXI:512924-513595 7.41e-01 100 chrXI:517789-518066 3.85e-01 100 chrXI:578741-579358 2.66e-06 31_[+1(2.15e-10)]_40 chrXI:618645-619249 9.42e-01 100 chrXI:666607-666801 1.49e-05 46_[-3(1.17e-09)]_2_[-3(5.22e-08)]_\ 10 chrXII:47665-49248 8.35e-01 100 chrXII:64319-66531 6.96e-01 100 chrXII:87424-88837 4.40e-02 100 chrXII:92400-92935 3.49e-07 3_[+1(1.92e-10)]_68 chrXII:97075-98865 9.23e-01 100 chrXII:167784-168264 7.47e-08 13_[-2(3.44e-10)]_58 chrXII:198328-199779 6.63e-01 100 chrXII:201656-202698 2.52e-02 10_[+2(5.62e-05)]_61 chrXII:214604-215067 2.36e-01 100 chrXII:231989-234167 7.91e-01 100 chrXII:241630-242026 8.08e-01 100 chrXII:262865-263917 1.92e-01 100 chrXII:281947-284417 7.67e-01 100 chrXII:366047-366566 6.27e-01 100 chrXII:369668-370272 6.12e-01 100 chrXII:374217-374680 7.17e-01 100 chrXII:423727-424492 1.14e-01 100 chrXII:426889-427418 7.85e-07 70_[+1(2.68e-10)]_1 chrXII:448485-449037 9.96e-01 100 chrXII:459608-460694 2.95e-01 100 chrXII:498333-500246 4.10e-01 100 chrXII:572533-573791 3.79e-01 100 chrXII:592325-593031 4.67e-01 100 chrXII:605120-605627 3.78e-04 71_[-2(2.09e-07)] chrXII:627664-628633 2.45e-01 100 chrXII:636732-639939 1.73e-01 100 chrXII:656845-657204 4.47e-06 11_[+3(4.73e-10)]_68 chrXII:663671-665515 3.34e-02 45_[-2(4.05e-05)]_26 chrXII:673587-674865 2.20e-01 100 chrXII:710455-710888 1.46e-01 100 chrXII:713146-713631 8.48e-01 100 chrXII:730970-731207 4.55e-01 100 chrXII:731398-732341 9.41e-01 100 chrXII:734590-734967 4.49e-03 73_[-3(1.78e-06)]_6 chrXII:780489-781874 5.27e-01 100 chrXII:783896-784525 5.00e-01 100 chrXII:790893-791748 4.57e-02 [+3(8.35e-05)]_79 chrXII:793774-797668 3.86e-01 100 chrXII:805811-806817 8.17e-01 100 chrXII:809758-812239 1.11e-01 100 chrXII:818503-819180 2.77e-01 100 chrXII:837677-839237 9.09e-01 100 chrXII:874896-877020 8.40e-01 100 chrXII:897504-899726 6.90e-01 100 chrXII:921679-923716 4.70e-01 100 chrXII:930555-931821 3.99e-01 100 chrXII:932093-932540 9.57e-01 100 chrXII:962857-963250 2.77e-07 13_[-2(3.81e-09)]_58 chrXII:975758-976201 2.82e-06 54_[-1(6.01e-09)]_17 chrXII:1018120-1019531 6.22e-01 100 chrXII:1028171-1028584 9.87e-01 100 chrXII:1029126-1029762 3.97e-01 100 chrXII:1051942-1052229 6.14e-14 36_[-1(1.26e-12)]_5_[-2(1.02e-08)]_\ 1 chrXIII:5443-5663 7.71e-06 39_[+3(3.93e-09)]_4_[+3(4.40e-05)]_\ 15 chrXIII:24017-25823 4.72e-01 100 chrXIII:91368-92112 1.03e-02 100 chrXIII:103154-103777 6.98e-01 100 chrXIII:103935-104163 6.49e-01 100 chrXIII:131657-132132 1.63e-07 15_[-2(2.78e-09)]_56 chrXIII:145896-147216 2.94e-01 100 chrXIII:168246-169040 9.99e-01 100 chrXIII:195938-196303 1.07e-08 79_[+3(5.47e-12)] chrXIII:225312-226637 9.69e-01 100 chrXIII:253366-253568 1.75e-01 100 chrXIII:258930-259444 6.55e-09 21_[-1(6.61e-05)]_14_[-2(3.44e-10)]_\ 7 chrXIII:288089-290050 8.34e-01 100 chrXIII:290565-291103 3.50e-07 58_[+1(4.57e-10)]_13 chrXIII:296764-298897 8.16e-01 100 chrXIII:302846-303154 1.88e-02 100 chrXIII:320998-321321 4.83e-06 38_[-1(4.70e-09)]_33 chrXIII:352081-353185 5.58e-01 100 chrXIII:362930-363429 9.47e-01 100 chrXIII:372215-372663 7.13e-08 13_[+2(8.49e-05)]_14_[-1(1.92e-10)]_\ 15 chrXIII:379064-379597 7.40e-05 23_[-1(2.30e-08)]_48 chrXIII:420335-420847 2.09e-06 47_[-1(1.92e-10)]_24 chrXIII:454022-455417 8.53e-01 100 chrXIII:463327-463886 1.41e-06 39_[+1(2.68e-10)]_32 chrXIII:480401-480834 6.48e-09 54_[-1(4.57e-13)]_17 chrXIII:499457-500637 2.15e-01 100 chrXIII:500844-501059 1.21e-01 41_[-2(9.03e-05)]_30 chrXIII:504894-505203 4.24e-01 100 chrXIII:549994-551813 8.51e-01 100 chrXIII:552105-553180 9.70e-01 100 chrXIII:557441-558353 4.68e-01 100 chrXIII:572720-573335 7.19e-01 100 chrXIII:586113-587408 9.99e-01 100 chrXIII:631157-634156 1.09e-01 100 chrXIII:651444-652944 6.92e-01 100 chrXIII:701831-703318 9.90e-01 100 chrXIII:731870-733118 5.33e-01 100 chrXIII:747610-748144 1.43e-06 65_[-1(6.89e-10)]_6 chrXIII:753047-755809 5.36e-02 100 chrXIII:759359-762984 5.93e-01 100 chrXIII:768211-768449 8.60e-01 100 chrXIII:808120-808557 9.49e-05 8_[+3(9.08e-09)]_71 chrXIII:837739-838256 7.64e-02 100 chrXIII:861177-861674 8.69e-01 100 chrXIII:872687-873096 7.98e-01 100 chrXIV:6616-6986 2.67e-01 100 chrXIV:63124-64378 1.41e-02 66_[-2(5.44e-05)]_5 chrXIV:89002-89681 7.60e-01 100 chrXIV:96033-96461 4.11e-07 44_[-1(1.92e-10)]_27 chrXIV:102565-103157 7.80e-01 100 chrXIV:104602-105056 8.72e-18 34_[+2(2.11e-13)]_5_[+1(3.33e-10)]_\ 3 chrXIV:108101-109351 3.99e-01 100 chrXIV:241392-242536 5.29e-01 100 chrXIV:302640-303701 8.63e-01 100 chrXIV:330797-331097 8.44e-01 100 chrXIV:374683-375091 5.76e-10 40_[+2(1.45e-11)]_31 chrXIV:442770-443244 1.31e-06 58_[+2(1.77e-08)]_13 chrXIV:443426-444793 7.66e-01 100 chrXIV:479787-481550 5.97e-04 20_[-2(7.50e-05)]_22_[-1(5.13e-06)] chrXIV:493926-495736 9.07e-01 100 chrXIV:499289-500763 7.85e-01 100 chrXIV:505903-507820 2.29e-02 39_[+3(3.84e-05)]_40 chrXIV:509198-510262 9.39e-01 100 chrXIV:518177-519143 5.02e-01 100 chrXIV:525068-525335 4.65e-01 100 chrXIV:546533-547586 1.39e-01 100 chrXIV:560186-560916 9.34e-01 100 chrXIV:568054-568552 9.11e-01 100 chrXIV:569673-570093 6.14e-14 34_[-1(1.26e-12)]_5_[-2(1.02e-08)]_\ 3 chrXIV:577203-577648 5.93e-01 100 chrXIV:602051-602572 2.52e-08 9_[-3(6.38e-05)]_30_[+2(1.02e-08)]_\ 11 chrXIV:619148-621769 4.35e-01 100 chrXIV:631667-632125 2.93e-15 [-1(6.46e-13)]_21_[+3(3.43e-10)]_29 chrXIV:632402-632895 7.88e-12 10_[+2(1.15e-09)]_5_[+1(6.01e-09)]_\ 27 chrXIV:725662-726379 9.96e-01 100 chrXIV:763007-763469 6.37e-01 100 chrXIV:783746-784327 2.16e-04 55_[-3(5.22e-08)]_24 chrXV:79722-80138 1.74e-01 100 chrXV:92590-94787 4.29e-01 100 chrXV:109554-110678 1.93e-01 100 chrXV:110853-111208 3.85e-04 32_[+3(5.72e-08)]_47 chrXV:113581-113882 5.04e-01 100 chrXV:159185-160130 1.31e-01 100 chrXV:160323-160690 8.69e-01 100 chrXV:161098-161759 9.91e-01 100 chrXV:168083-168325 4.17e-01 100 chrXV:170284-170827 3.01e-01 100 chrXV:216288-216706 1.64e-01 100 chrXV:226421-226931 2.62e-05 34_[+3(5.03e-09)]_45 chrXV:228081-228850 9.07e-01 100 chrXV:252870-254131 7.04e-01 100 chrXV:264856-265597 7.71e-01 100 chrXV:274444-274989 4.79e-08 15_[+2(1.35e-08)]_56 chrXV:281985-282438 3.17e-14 2_[-3(5.03e-09)]_20_[+1(5.14e-12)]_\ 28 chrXV:287155-288453 1.14e-01 100 chrXV:300907-301767 8.76e-01 100 chrXV:302316-302575 8.67e-01 100 chrXV:340003-340729 2.73e-06 17_[-2(5.66e-10)]_54 chrXV:353908-354313 2.71e-11 15_[-2(2.11e-13)]_56 chrXV:369892-371340 5.35e-01 100 chrXV:378181-382791 5.67e-01 100 chrXV:407633-408160 8.00e-01 100 chrXV:438473-438964 2.52e-07 40_[+1(2.15e-10)]_31 chrXV:444635-446248 2.27e-01 100 chrXV:464277-464943 9.88e-01 100 chrXV:487430-487763 8.30e-01 100 chrXV:504971-505488 1.23e-01 100 chrXV:571052-572143 9.76e-01 100 chrXV:594304-594665 9.47e-01 100 chrXV:639152-639442 4.15e-04 61_[-3(1.87e-07)]_18 chrXV:663539-664053 7.10e-07 66_[-1(1.92e-10)]_5 chrXV:678044-679174 8.54e-01 100 chrXV:710121-710773 9.96e-01 100 chrXV:722779-724714 3.30e-01 100 chrXV:758596-759493 8.77e-01 100 chrXV:779688-781008 8.19e-01 100 chrXV:853791-854809 9.63e-01 100 chrXV:866279-867881 5.55e-01 100 chrXV:876497-880627 1.53e-01 100 chrXV:901443-901637 6.05e-01 100 chrXV:925177-925402 2.28e-01 100 chrXV:964383-965355 2.86e-02 8_[+2(3.10e-05)]_63 chrXV:968129-968495 3.76e-03 100 chrXV:976377-976689 3.26e-01 100 chrXV:978462-979181 1.81e-01 100 chrXV:979765-981074 9.22e-01 100 chrXV:1003993-1004562 1.44e-01 100 chrXV:1011215-1012270 2.75e-02 100 chrXV:1025734-1026065 3.94e-01 100 chrXV:1027771-1030355 8.46e-01 100 chrXVI:55875-56429 1.08e-04 67_[-1(2.30e-08)]_4 chrXVI:74339-77887 5.33e-01 100 chrXVI:97898-99239 5.35e-01 100 chrXVI:172900-174071 8.75e-01 100 chrXVI:188549-188930 6.13e-04 46_[-3(7.10e-07)]_33 chrXVI:209430-210469 1.00e+00 100 chrXVI:213153-214072 3.37e-01 100 chrXVI:280601-282970 5.95e-01 100 chrXVI:302486-304327 5.52e-01 100 chrXVI:338759-339167 5.10e-01 100 chrXVI:350291-352717 1.71e-01 100 chrXVI:371027-372960 2.63e-01 100 chrXVI:378655-378999 3.60e-01 100 chrXVI:404502-406643 5.55e-01 100 chrXVI:432549-434126 3.68e-01 100 chrXVI:435671-436182 1.41e-12 17_[-1(4.32e-09)]_5_[-2(1.12e-08)]_\ 20 chrXVI:519924-520529 2.42e-01 100 chrXVI:560018-560500 5.32e-10 42_[-2(1.45e-11)]_29 chrXVI:572180-572659 4.69e-01 100 chrXVI:578558-579705 5.18e-01 100 chrXVI:581843-582408 8.86e-09 29_[+1(4.57e-13)]_42 chrXVI:622356-623137 4.88e-01 100 chrXVI:645256-646170 6.96e-01 100 chrXVI:653805-655041 9.79e-01 100 chrXVI:689384-689891 1.14e-01 29_[+1(8.86e-05)]_42 chrXVI:699097-700684 1.78e-01 100 chrXVI:731600-733108 4.79e-01 100 chrXVI:744075-744583 4.51e-10 12_[+2(9.69e-08)]_5_[+1(2.82e-08)]_\ 25 chrXVI:768354-769654 6.94e-01 100 chrXVI:775645-776114 9.17e-01 100 chrXVI:794250-794825 9.98e-01 100 chrXVI:794996-796163 1.33e-01 65_[+1(9.09e-05)]_6 chrXVI:810576-810977 9.34e-01 100 chrXVI:819350-821262 6.67e-01 100 chrXVI:842817-843705 4.34e-01 100 chrXVI:856728-857171 2.79e-15 2_[-3(4.73e-10)]_22_[+1(4.70e-09)]_\ 26 chrXVI:860128-860708 1.64e-13 10_[-3(5.03e-09)]_20_[+1(5.14e-12)]_\ 20 chrXVI:879903-880570 7.34e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************