******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--YAP1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:405657-406272 1.0000 100 chrVIII:119707-121715 1.0000 100 chrXIV:631701-632107 1.0000 100 chrVII:88429-89258 1.0000 100 chrXI:163275-164490 1.0000 100 chrI:180927-181676 1.0000 100 chrIV:1256747-1257290 1.0000 100 chrXVI:818666-819782 1.0000 100 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chrVII:828459-828975 1.0000 100 chrXV:109665-110679 1.0000 100 chrVIII:455403-456341 1.0000 100 chrVII:783616-785749 1.0000 100 chrXVI:98454-99063 1.0000 100 chrIV:1075286-1075764 1.0000 100 chrIV:619722-620519 1.0000 100 chrXVI:775656-776196 1.0000 100 chrXIII:651100-652947 1.0000 100 chrVII:738914-739569 1.0000 100 chrIV:992597-993336 1.0000 100 chrXI:74402-75084 1.0000 100 chrXV:288012-288396 1.0000 100 chrXII:875267-875656 1.0000 100 chrVII:440161-442402 1.0000 100 chrX:651906-652006 1.0000 100 chrVII:254162-254754 1.0000 100 chrIV:1502054-1503209 1.0000 100 chrV:422791-425306 1.0000 100 chrXII:39136-40403 1.0000 100 chrXIV:575052-577369 1.0000 100 chrII:444602-445370 1.0000 100 chrVIII:374605-376231 1.0000 100 chrXII:374217-374683 1.0000 100 chrVIII:461707-462901 1.0000 100 chrVI:162017-162375 1.0000 100 chrIV:1175579-1176051 1.0000 100 chrX:197052-197152 1.0000 100 chrIV:1182409-1183669 1.0000 100 chrV:364194-364510 1.0000 100 chrXIII:145795-146175 1.0000 100 chrIV:726978-727976 1.0000 100 chrII:604255-605990 1.0000 100 chrIV:1202864-1203056 1.0000 100 chrXII:592348-593164 1.0000 100 chrIII:227658-228218 1.0000 100 chrXVI:172986-174111 1.0000 100 chrV:305854-306073 1.0000 100 chrXII:88179-88826 1.0000 100 chrIV:464871-465841 1.0000 100 chrII:226882-227360 1.0000 100 chrVII:825390-826742 1.0000 100 chrII:682343-682523 1.0000 100 chrXI:517750-518301 1.0000 100 chrIII:294937-295974 1.0000 100 chrII:606297-607124 1.0000 100 chrIV:1012173-1013646 1.0000 100 chrX:542763-542863 1.0000 100 chrXV:828831-830109 1.0000 100 chrXII:932184-932483 1.0000 100 chrXIII:347214-347807 1.0000 100 chrV:434398-434749 1.0000 100 chrX:233630-233730 1.0000 100 chrXVI:842576-843275 1.0000 100 chrXIII:631299-634863 1.0000 100 chrIV:322181-323623 1.0000 100 chrVII:875460-875823 1.0000 100 chrIII:168024-168640 1.0000 100 chrXII:167794-168250 1.0000 100 chrII:347428-347896 1.0000 100 chrIV:541207-542468 1.0000 100 chrXII:731941-732323 1.0000 100 chrXIV:567884-568661 1.0000 100 chrX:115468-115568 1.0000 100 chrVII:561116-561903 1.0000 100 chrXV:96153-97351 1.0000 100 chrXIII:219141-219365 1.0000 100 chrXIV:374688-375092 1.0000 100 chrIV:1240661-1241006 1.0000 100 chrIV:1204280-1206748 1.0000 100 chrXIII:434035-434265 1.0000 100 chrI:138684-139348 1.0000 100 chrXVI:586542-587103 1.0000 100 chrVII:574630-575837 1.0000 100 chrXVI:559684-560492 1.0000 100 chrX:617664-617764 1.0000 100 chrXI:513258-513640 1.0000 100 chrXV:877484-878096 1.0000 100 chrXIII:353423-353664 1.0000 100 chrVII:914620-915269 1.0000 100 chrVII:771868-772934 1.0000 100 chrIV:453520-454360 1.0000 100 chrX:521570-521670 1.0000 100 chrXI:313172-313669 1.0000 100 chrXIII:288014-290178 1.0000 100 chrXVI:338734-339334 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--YAP1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--YAP1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--YAP1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.309 C 0.191 G 0.191 T 0.309 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--YAP1/background): A 0.314 C 0.186 G 0.186 T 0.314 ******************************************************************************** ******************************************************************************** MOTIF GRTCVBSGGTTCGANYCCSV MEME-1 width = 20 sites = 75 llr = 1205 E-value = 1.2e-204 ******************************************************************************** -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGANYCCSV MEME-1 Description -------------------------------------------------------------------------------- Simplified A 142:3:12::::3a2:::13 pos.-specific C 2118443::::a::24a753 probability G 651:2258a:::7:2:::35 matrix T ::62131::aa:::46:21: bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 **** * * Relative 1.5 * ******* * Entropy 1.2 * ******* ** (23.2 bits) 1.0 * ******* *** 0.7 ** * ******* ***** 0.5 ** *********** ***** 0.2 ************** ***** 0.0 -------------------- Multilevel GGTCCCGGGTTCGATTCCCG consensus AATATC A CC TGA sequence GG G C A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGANYCCSV MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrXIV:631701-632107 - 1 1.98e-13 GGGTGCGGGA GGTCCCGGGTTCGAGTCCCG chrIV:1256747-1257290 - 49 8.31e-12 CCCAAGCATG GGGCCCGGGTTCGATTCCCG GCTTCCGCAT chrI:166056-166567 + 50 2.36e-10 GCAAGGAAGA GGTCATCGGTTCGATTCCGG TTGCGTCCAA chrXII:214610-215156 - 59 2.36e-10 GCAAGGAAGA GGTCATCGGTTCGATTCCGG TTGCGTCCAT chrIV:83334-83786 + 80 3.35e-10 GCCATCGTTG GGCCCCCGGTTCGATTCCGG G chrXV:281846-282574 + 46 3.35e-10 GCCATCGTTG GGCCCCCGGTTCGATTCCGG GCTTGCGCAT chrIV:1352320-1352712 - 9 3.98e-10 TTAATCATAA GGTTAGGGGTTCGAGCCCCC TACAGGGC chrVII:876039-876830 + 54 3.98e-10 TTAATCATAA GGTTAGGGGTTCGAGCCCCC TACAGGGCTT chrVI:226433-226950 - 56 3.98e-10 TTAATCATAA GGTTAGGGGTTCGAGCCCCC TACAGGGCTT chrVII:185490-185915 - 71 3.98e-10 TTAATCATAA GGTTAGGGGTTCGAGCCCCC TACAGGGCTA chrX:414738-414838 + 73 3.98e-10 TTAATCATAA GGTTAGGGGTTCGAGCCCCC TACAGGGC chrXIII:480373-480922 - 33 3.98e-10 TTAATCATAA GGTTAGGGGTTCGAGCCCCC TACAGGGCTT chrIV:1075286-1075764 - 6 5.49e-10 ACACGGCAAA GGTCCCGAGTTCGATCCTCG GTTGG chrIX:183313-183670 - 8 6.43e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGC TAGAGAC chrII:197240-197832 + 53 6.43e-10 ATAACGCGGG GATCAGCGGTTCGATCCCGC TAGAGACCAT chrXI:517750-518301 + 57 1.02e-09 GCATGGGAGA GGTCTCCGGTTCGATTCCGG ACTCGTCCAT chrX:197052-197152 - 34 1.02e-09 GCATGGGAGA GGTCTCCGGTTCGATTCCGG ACTCGTCCAA chrIV:410168-410773 + 3 1.02e-09 GA GGTCTCCGGTTCGATTCCGG ACTCGTCCAA chrXII:796965-797446 + 66 1.58e-09 TTCACCGTGG AGACCGGGGTTCGACTCCCC GTATCGGAGA chrIII:82132-82808 - 51 1.58e-09 TTCACCGTGG AGACCGGGGTTCGACTCCCC GTATCGGAGT chrVII:541590-542175 + 61 1.58e-09 TTCACCGTGG AGACCGGGGTTCGACTCCCC GTATCGGAGT chrXVI:209949-210513 - 20 1.58e-09 TTCACCGTGG AGACCGGGGTTCGACTCCCC GTATCGGAGT chrVII:828459-828975 - 65 2.74e-09 CTAATCAGAA GATTATGGGTTCGACCCCCA TCGTGAGTGC chrIV:568585-569335 + 15 2.74e-09 CTAATCAGAA GATTATGGGTTCGACCCCCA TCGTGAGTGC chrII:326579-327058 - 33 2.74e-09 ACACGGCGAA GATCCCGAGTTCGAACCTCG GTTGGATCAA chrX:374203-374303 - 15 2.74e-09 CTAATCAGAA GATTATGGGTTCGACCCCCA TCGTGAGTGC chrXIII:131567-132060 - 71 2.74e-09 CTAATCAGAA GATTATGGGTTCGACCCCCA TCGTGAGTGC chrXIII:747711-748148 - 22 2.74e-09 CTAATCAGAA GATTATGGGTTCGACCCCCA TCGTGAGTGT chrX:355106-355206 + 57 2.74e-09 CTAATCAGAA GATTATGGGTTCGACCCCCA TCGTGAGTGC chrII:405657-406272 + 7 2.74e-09 TCAGAA GATTATGGGTTCGACCCCCA TCGTGAGTGC chrIII:168024-168640 - 28 4.06e-09 TTGATCCGGA CAACCCCGGTTCGAATCCGG GTAGGACCTT chrXII:875267-875656 + 32 4.06e-09 GATACCGAAA TGTCAGGGGTTCGAGCCCCC TATGAGGAGT chrIV:802596-802973 - 6 4.06e-09 TTGATCCGGA CAACCCCGGTTCGAATCCGG GTAGG chrV:130802-131442 - 19 4.06e-09 TTGATCCGAA CAACCCCGGTTCGAATCCGG GTAAGACCTA chrII:350640-351110 + 45 4.06e-09 TTGATCCGGA CAACCCCGGTTCGAATCCGG GTAAGACCTT chrXV:438476-438983 + 31 4.06e-09 GATACCGAAA TGTCAGGGGTTCGAGCCCCC TATGAGGAGT chrXVI:768522-769915 - 48 4.06e-09 GATACCGAAA TGTCAGGGGTTCGAGCCCCC TATGAGGAGT chrXV:464293-464772 + 41 6.68e-09 GCATGCGAGA GGCCCTGGGTTCAATTCCCA GCTCGCCCCT chrVIII:388676-389185 - 22 6.68e-09 GCATGCGAGA GGCCCTGGGTTCAATTCCCA GCTCGCCCCA chrXV:300861-301423 + 78 6.68e-09 GCATGCGAGA GGCCCTGGGTTCAATTCCCA GCT chrXIII:372196-372756 - 28 1.33e-08 ACACGCAGAA CGTCCCCAGTTCGATCCTGG GCGAAATCAT chrXIII:586412-586951 - 14 1.33e-08 ACACGCAGAA CGTCCCCAGTTCGATCCTGG GCGAAATCAT chrIV:434042-434532 - 36 2.79e-08 GTAATGTGGA GATCATCGGTTCAAATCCGA TTGGAAGCAT chrXIV:104620-105130 + 24 2.79e-08 GTAATGTGGA GATCATCGGTTCAAATCCGA TTGGAAGCAT chrIX:325546-326103 + 18 2.79e-08 GTAATGTGGA GATCATCGGTTCAAATCCGA TTGGAAGCAA chrII:266198-266647 + 50 2.79e-08 GTAATGTGGA GATCATCGGTTCAAATCCGA TTGGAAGCAT chrIX:336131-336681 - 2 5.48e-08 GTCGCGTGCC AGATCGGGGTTCAATTCCCC G chrXII:426923-427501 + 13 5.48e-08 GTCGCGTGCC AGATCGGGGTTCAATTCCCC GTCGCGGAGA chrX:415637-415737 - 44 6.57e-08 GCAATCGAAG GGTTGCAGGTTCAATTCCTG TCCGTTTCAA chrXVI:55807-56518 - 66 6.57e-08 GCAATCGAAG GGTTGCAGGTTCAATTCCTG TCCGTTTCAA chrXIV:102491-102973 + 79 7.84e-08 TTAATCGCAA GATCGTGAGTTCAACCCTCA CT chrXIV:632442-632907 + 20 7.84e-08 TTAATCGCAA GATCGTGAGTTCAACCCTCA CTGGGGTCGT chrVII:730974-731398 + 46 7.84e-08 TTAATCGCAA GATCGTGAGTTCAACCCTCA CTGGGGTCGT chrXV:340039-340588 - 45 7.84e-08 CGAACCAGAA GATTCCAGGTTCAAGTCCTG GCGGGGAAGA chrXII:975791-976270 - 12 7.84e-08 TTAATCGCAA GATCGTGAGTTCAACCCTCA CTGGGGTCGT chrXV:487259-487698 + 56 7.84e-08 TTAATCGCAA GATCGTGAGTTCAACCCTCA CTGGGGTCGT chrXVI:435669-436189 - 23 9.32e-08 CAAATCTGTT GGTCCTTAGTTCGATCCTGA GTGCGAGCTT chrX:390787-390887 - 35 1.01e-07 ATAATCTGAA GGTCGAGAGTTCGAACCTCC CCTGGAGCAT chrX:422735-422835 + 56 1.01e-07 ATAATCTGAA GGTCGAGAGTTCGAACCTCC CCTGGAGCAC chrII:347428-347896 + 46 1.20e-07 GGACGGTTGT CCGCGCGAGTTCGAACCTCG CATCCTTCAG chrII:226882-227360 + 57 1.30e-07 TGGGCTTTGC CCGCGCAGGTTCGAGTCCTG CAGTTGTCGT chrIV:1305373-1306085 + 5 1.30e-07 TGGC CCGCGCAGGTTCGAGTCCTG CAGTTGTCGT chrI:182365-182732 - 33 1.30e-07 TGGGCTTTGC CCGCGCAGGTTCGAGTCCTG CAGTTGTCGT chrIV:980776-981247 - 22 1.30e-07 TGGGCTTTGC CCGCGCAGGTTCGAGTCCTG CAGTTGTCGT chrXI:313172-313669 - 40 3.97e-07 GTGGCCGATG AAACCCTGGTTCGATTCTAG GAGATGGCAT chrV:434398-434749 - 27 3.97e-07 GTGGCCGATG AAACCCTGGTTCGATTCTAG GAGATGGCAT chrV:207123-207674 + 52 3.97e-07 GTGGCCGATG AAACCCTGGTTCGATTCTAG GAGATGGCAT chrVII:110424-110930 - 7 3.97e-07 GTGGCCGATG AAACCCTGGTTCGATTCTAG GAGATG chrVIII:62500-63069 + 64 3.97e-07 GTGGCCGATG AAACCCTGGTTCGATTCTAG GAGATGGCAT chrVI:210442-210809 - 53 4.25e-07 GAAATCTTGA GATCGGGCGTTCGACTCGCC CCCGGGAGAT chrXVI:689380-689842 + 57 5.53e-07 TGGGCTCTGC CCGCGCTGGTTCAAATCCTG CTGGTGTCGT chrV:288236-288736 - 16 5.53e-07 TGGGCTCTGC CCGCGCTGGTTCAAATCCTG CTGGTGTCGT chrIV:1095018-1095705 - 68 6.68e-07 GATATCTGGA GGTCCTGTGTTCGATCCACA GAGTTCGCAT chrVI:191277-191795 - 36 9.59e-07 TGGGTTTTAC CTGCGCAGGTTCGAATCCTG TCTGTGACGC chrVII:483253-483816 + 2 1.66e-06 G GATCTCCGCTTCGAGACCGG GTTTGTTTTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGANYCCSV MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIV:631701-632107 2e-13 [-1]_80 chrIV:1256747-1257290 8.3e-12 48_[-1]_32 chrI:166056-166567 2.4e-10 49_[+1]_31 chrXII:214610-215156 2.4e-10 58_[-1]_22 chrIV:83334-83786 3.3e-10 79_[+1]_1 chrXV:281846-282574 3.3e-10 45_[+1]_35 chrIV:1352320-1352712 4e-10 8_[-1]_72 chrVII:876039-876830 4e-10 53_[+1]_27 chrVI:226433-226950 4e-10 55_[-1]_25 chrVII:185490-185915 4e-10 70_[-1]_10 chrX:414738-414838 4e-10 72_[+1]_8 chrXIII:480373-480922 4e-10 32_[-1]_48 chrIV:1075286-1075764 5.5e-10 5_[-1]_75 chrIX:183313-183670 6.4e-10 7_[-1]_73 chrII:197240-197832 6.4e-10 52_[+1]_28 chrXI:517750-518301 1e-09 56_[+1]_24 chrX:197052-197152 1e-09 33_[-1]_47 chrIV:410168-410773 1e-09 2_[+1]_78 chrXII:796965-797446 1.6e-09 65_[+1]_15 chrIII:82132-82808 1.6e-09 50_[-1]_30 chrVII:541590-542175 1.6e-09 60_[+1]_20 chrXVI:209949-210513 1.6e-09 19_[-1]_61 chrVII:828459-828975 2.7e-09 64_[-1]_16 chrIV:568585-569335 2.7e-09 14_[+1]_66 chrII:326579-327058 2.7e-09 32_[-1]_48 chrX:374203-374303 2.7e-09 14_[-1]_66 chrXIII:131567-132060 2.7e-09 70_[-1]_10 chrXIII:747711-748148 2.7e-09 21_[-1]_59 chrX:355106-355206 2.7e-09 56_[+1]_24 chrII:405657-406272 2.7e-09 6_[+1]_74 chrIII:168024-168640 4.1e-09 27_[-1]_53 chrXII:875267-875656 4.1e-09 31_[+1]_49 chrIV:802596-802973 4.1e-09 5_[-1]_75 chrV:130802-131442 4.1e-09 18_[-1]_62 chrII:350640-351110 4.1e-09 44_[+1]_36 chrXV:438476-438983 4.1e-09 30_[+1]_50 chrXVI:768522-769915 4.1e-09 47_[-1]_33 chrXV:464293-464772 6.7e-09 40_[+1]_40 chrVIII:388676-389185 6.7e-09 21_[-1]_59 chrXV:300861-301423 6.7e-09 77_[+1]_3 chrXIII:372196-372756 1.3e-08 27_[-1]_53 chrXIII:586412-586951 1.3e-08 13_[-1]_67 chrIV:434042-434532 2.8e-08 35_[-1]_45 chrXIV:104620-105130 2.8e-08 23_[+1]_57 chrIX:325546-326103 2.8e-08 17_[+1]_63 chrII:266198-266647 2.8e-08 49_[+1]_31 chrIX:336131-336681 5.5e-08 1_[-1]_79 chrXII:426923-427501 5.5e-08 12_[+1]_68 chrX:415637-415737 6.6e-08 43_[-1]_37 chrXVI:55807-56518 6.6e-08 65_[-1]_15 chrXIV:102491-102973 7.8e-08 78_[+1]_2 chrXIV:632442-632907 7.8e-08 19_[+1]_61 chrVII:730974-731398 7.8e-08 45_[+1]_35 chrXV:340039-340588 7.8e-08 44_[-1]_36 chrXII:975791-976270 7.8e-08 11_[-1]_69 chrXV:487259-487698 7.8e-08 55_[+1]_25 chrXVI:435669-436189 9.3e-08 22_[-1]_58 chrX:390787-390887 1e-07 34_[-1]_46 chrX:422735-422835 1e-07 55_[+1]_25 chrII:347428-347896 1.2e-07 45_[+1]_35 chrII:226882-227360 1.3e-07 56_[+1]_24 chrIV:1305373-1306085 1.3e-07 4_[+1]_76 chrI:182365-182732 1.3e-07 32_[-1]_48 chrIV:980776-981247 1.3e-07 21_[-1]_59 chrXI:313172-313669 4e-07 39_[-1]_41 chrV:434398-434749 4e-07 26_[-1]_54 chrV:207123-207674 4e-07 51_[+1]_29 chrVII:110424-110930 4e-07 6_[-1]_74 chrVIII:62500-63069 4e-07 63_[+1]_17 chrVI:210442-210809 4.3e-07 52_[-1]_28 chrXVI:689380-689842 5.5e-07 56_[+1]_24 chrV:288236-288736 5.5e-07 15_[-1]_65 chrIV:1095018-1095705 6.7e-07 67_[-1]_13 chrVI:191277-191795 9.6e-07 35_[-1]_45 chrVII:483253-483816 1.7e-06 1_[+1]_79 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGANYCCSV MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GRTCVBSGGTTCGANYCCSV width=20 seqs=75 chrXIV:631701-632107 ( 1) GGTCCCGGGTTCGAGTCCCG 1 chrIV:1256747-1257290 ( 49) GGGCCCGGGTTCGATTCCCG 1 chrI:166056-166567 ( 50) GGTCATCGGTTCGATTCCGG 1 chrXII:214610-215156 ( 59) GGTCATCGGTTCGATTCCGG 1 chrIV:83334-83786 ( 80) GGCCCCCGGTTCGATTCCGG 1 chrXV:281846-282574 ( 46) GGCCCCCGGTTCGATTCCGG 1 chrIV:1352320-1352712 ( 9) GGTTAGGGGTTCGAGCCCCC 1 chrVII:876039-876830 ( 54) GGTTAGGGGTTCGAGCCCCC 1 chrVI:226433-226950 ( 56) GGTTAGGGGTTCGAGCCCCC 1 chrVII:185490-185915 ( 71) GGTTAGGGGTTCGAGCCCCC 1 chrX:414738-414838 ( 73) GGTTAGGGGTTCGAGCCCCC 1 chrXIII:480373-480922 ( 33) GGTTAGGGGTTCGAGCCCCC 1 chrIV:1075286-1075764 ( 6) GGTCCCGAGTTCGATCCTCG 1 chrIX:183313-183670 ( 8) GATCAGCGGTTCGATCCCGC 1 chrII:197240-197832 ( 53) GATCAGCGGTTCGATCCCGC 1 chrXI:517750-518301 ( 57) GGTCTCCGGTTCGATTCCGG 1 chrX:197052-197152 ( 34) GGTCTCCGGTTCGATTCCGG 1 chrIV:410168-410773 ( 3) GGTCTCCGGTTCGATTCCGG 1 chrXII:796965-797446 ( 66) AGACCGGGGTTCGACTCCCC 1 chrIII:82132-82808 ( 51) AGACCGGGGTTCGACTCCCC 1 chrVII:541590-542175 ( 61) AGACCGGGGTTCGACTCCCC 1 chrXVI:209949-210513 ( 20) AGACCGGGGTTCGACTCCCC 1 chrVII:828459-828975 ( 65) GATTATGGGTTCGACCCCCA 1 chrIV:568585-569335 ( 15) GATTATGGGTTCGACCCCCA 1 chrII:326579-327058 ( 33) GATCCCGAGTTCGAACCTCG 1 chrX:374203-374303 ( 15) GATTATGGGTTCGACCCCCA 1 chrXIII:131567-132060 ( 71) GATTATGGGTTCGACCCCCA 1 chrXIII:747711-748148 ( 22) GATTATGGGTTCGACCCCCA 1 chrX:355106-355206 ( 57) GATTATGGGTTCGACCCCCA 1 chrII:405657-406272 ( 7) GATTATGGGTTCGACCCCCA 1 chrIII:168024-168640 ( 28) CAACCCCGGTTCGAATCCGG 1 chrXII:875267-875656 ( 32) TGTCAGGGGTTCGAGCCCCC 1 chrIV:802596-802973 ( 6) CAACCCCGGTTCGAATCCGG 1 chrV:130802-131442 ( 19) CAACCCCGGTTCGAATCCGG 1 chrII:350640-351110 ( 45) CAACCCCGGTTCGAATCCGG 1 chrXV:438476-438983 ( 31) TGTCAGGGGTTCGAGCCCCC 1 chrXVI:768522-769915 ( 48) TGTCAGGGGTTCGAGCCCCC 1 chrXV:464293-464772 ( 41) GGCCCTGGGTTCAATTCCCA 1 chrVIII:388676-389185 ( 22) GGCCCTGGGTTCAATTCCCA 1 chrXV:300861-301423 ( 78) GGCCCTGGGTTCAATTCCCA 1 chrXIII:372196-372756 ( 28) CGTCCCCAGTTCGATCCTGG 1 chrXIII:586412-586951 ( 14) CGTCCCCAGTTCGATCCTGG 1 chrIV:434042-434532 ( 36) GATCATCGGTTCAAATCCGA 1 chrXIV:104620-105130 ( 24) GATCATCGGTTCAAATCCGA 1 chrIX:325546-326103 ( 18) GATCATCGGTTCAAATCCGA 1 chrII:266198-266647 ( 50) GATCATCGGTTCAAATCCGA 1 chrIX:336131-336681 ( 2) AGATCGGGGTTCAATTCCCC 1 chrXII:426923-427501 ( 13) AGATCGGGGTTCAATTCCCC 1 chrX:415637-415737 ( 44) GGTTGCAGGTTCAATTCCTG 1 chrXVI:55807-56518 ( 66) GGTTGCAGGTTCAATTCCTG 1 chrXIV:102491-102973 ( 79) GATCGTGAGTTCAACCCTCA 1 chrXIV:632442-632907 ( 20) GATCGTGAGTTCAACCCTCA 1 chrVII:730974-731398 ( 46) GATCGTGAGTTCAACCCTCA 1 chrXV:340039-340588 ( 45) GATTCCAGGTTCAAGTCCTG 1 chrXII:975791-976270 ( 12) GATCGTGAGTTCAACCCTCA 1 chrXV:487259-487698 ( 56) GATCGTGAGTTCAACCCTCA 1 chrXVI:435669-436189 ( 23) GGTCCTTAGTTCGATCCTGA 1 chrX:390787-390887 ( 35) GGTCGAGAGTTCGAACCTCC 1 chrX:422735-422835 ( 56) GGTCGAGAGTTCGAACCTCC 1 chrII:347428-347896 ( 46) CCGCGCGAGTTCGAACCTCG 1 chrII:226882-227360 ( 57) CCGCGCAGGTTCGAGTCCTG 1 chrIV:1305373-1306085 ( 5) CCGCGCAGGTTCGAGTCCTG 1 chrI:182365-182732 ( 33) CCGCGCAGGTTCGAGTCCTG 1 chrIV:980776-981247 ( 22) CCGCGCAGGTTCGAGTCCTG 1 chrXI:313172-313669 ( 40) AAACCCTGGTTCGATTCTAG 1 chrV:434398-434749 ( 27) AAACCCTGGTTCGATTCTAG 1 chrV:207123-207674 ( 52) AAACCCTGGTTCGATTCTAG 1 chrVII:110424-110930 ( 7) AAACCCTGGTTCGATTCTAG 1 chrVIII:62500-63069 ( 64) AAACCCTGGTTCGATTCTAG 1 chrVI:210442-210809 ( 53) GATCGGGCGTTCGACTCGCC 1 chrXVI:689380-689842 ( 57) CCGCGCTGGTTCAAATCCTG 1 chrV:288236-288736 ( 16) CCGCGCTGGTTCAAATCCTG 1 chrIV:1095018-1095705 ( 68) GGTCCTGTGTTCGATCCACA 1 chrVI:191277-191795 ( 36) CTGCGCAGGTTCGAATCCTG 1 chrVII:483253-483816 ( 2) GATCTCCGCTTCGAGACCGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGANYCCSV MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 48600 bayes= 10.2241 E= 1.2e-204 -110 0 175 -297 40 -100 136 -455 -65 -148 -64 97 -1287 203 -1287 -39 3 105 36 -255 -355 119 36 -3 -155 52 148 -155 -85 -380 210 -455 -1287 -380 240 -1287 -1287 -1287 -1287 167 -1287 -1287 -1287 167 -1287 242 -1287 -1287 -31 -1287 200 -1287 167 -1287 -1287 -1287 -65 28 19 20 -455 119 -1287 84 -1287 242 -1287 -1287 -455 198 -380 -39 -223 148 59 -123 -16 52 128 -1287 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGANYCCSV MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 75 E= 1.2e-204 0.146667 0.186667 0.626667 0.040000 0.413333 0.093333 0.480000 0.013333 0.200000 0.066667 0.120000 0.613333 0.000000 0.760000 0.000000 0.240000 0.320000 0.386667 0.240000 0.053333 0.026667 0.426667 0.240000 0.306667 0.106667 0.266667 0.520000 0.106667 0.173333 0.013333 0.800000 0.013333 0.000000 0.013333 0.986667 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.253333 0.000000 0.746667 0.000000 1.000000 0.000000 0.000000 0.000000 0.200000 0.226667 0.213333 0.360000 0.013333 0.426667 0.000000 0.560000 0.000000 1.000000 0.000000 0.000000 0.013333 0.733333 0.013333 0.240000 0.066667 0.520000 0.280000 0.133333 0.280000 0.266667 0.453333 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTCVBSGGTTCGANYCCSV MEME-1 regular expression -------------------------------------------------------------------------------- G[GA][TA][CT][CAG][CTG][GC]GGTTC[GA]A[TCGA][TC]C[CT][CG][GAC] -------------------------------------------------------------------------------- Time 352.15 secs. ******************************************************************************** ******************************************************************************** MOTIF WGSYYNYDTGGCSYAGTKGKTARAGSS MEME-2 width = 27 sites = 65 llr = 1110 E-value = 2.1e-182 ******************************************************************************** -------------------------------------------------------------------------------- Motif WGSYYNYDTGGCSYAGTKGKTARAGSS MEME-2 Description -------------------------------------------------------------------------------- Simplified A 6:1:2212:3::12a2::::26442:1 pos.-specific C 1155434::::743:::2:1::12163 probability G :942:224:7a:31:8:5a5::42635 matrix T 3:134334a::324::a3:473111:2 bits 2.4 * * 2.2 * * 1.9 * * * 1.7 * * * *** * Relative 1.5 * * * *** * Entropy 1.2 * **** *** * (24.6 bits) 1.0 * **** *** ** * 0.7 *** **** *** *** ** 0.5 *** ****** ******** *** 0.2 ***** ********************* 0.0 --------------------------- Multilevel AGCCTCCGTGGCCTAGTGGGTAAAGCG consensus T GTCTTT A TGC T TATGC GC sequence G GA T C G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSYYNYDTGGCSYAGTKGKTARAGSS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------- chrX:197052-197152 - 72 2.54e-12 TT AGGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrXI:517750-518301 + 12 6.84e-12 ATATCTACTA TGGGCGTGTGGCGTAGTCGGTAGCGCG CTCCCTTAGC chrII:197240-197832 + 7 1.20e-11 TAATCA AGGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrII:226882-227360 + 3 1.44e-11 CG AGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrI:166056-166567 + 5 1.44e-11 GAGT TGGGCACATGGCGCAGTTGGTAGCGCG CTTCCCTTGC chrIV:980776-981247 - 69 1.44e-11 AATTG AGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrVII:121954-122604 + 39 2.44e-11 CCAACGAATT AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrIV:1352320-1352712 - 47 2.44e-11 CCAACGAAAT AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrVII:876039-876830 + 9 2.44e-11 AATAGAAT AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrV:288236-288736 - 63 2.44e-11 TCATAATGAT AGGCACTATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrX:414738-414838 + 28 2.44e-11 TCAACGAATT AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrXIII:480373-480922 - 71 2.44e-11 AGT AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrV:435674-436009 - 8 2.44e-11 CAACAATAAG AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACT chrIX:300108-300493 - 25 2.44e-11 CCAACGAAAT AGCCTTGTTGGCGCAATCGGTAGCGCG TATGACTCTT chrXIV:602093-602526 + 52 2.89e-11 CAGATAACAA TGGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrIX:183313-183670 - 47 2.89e-11 AACAAATTCC TGGTCTCTTGGCCCAGTTGGTTAAGGC ACCGTGCTAA chrXII:167794-168250 - 28 3.42e-11 AATAGTCATA TGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrXIII:259017-259463 - 24 3.42e-11 CAAGTTAGTA TGGCAACTTGGCCGAGTGGTTAAGGCG AAAGATTAGA chrIII:227658-228218 + 53 5.60e-11 CAAATCGAAA TGGCACTATGGCCGAGTGGTTAAGGCG AGAGACTCGA chrII:266198-266647 + 5 1.05e-10 AAAC TGCTTCTATGGCCAAGTTGGTAAGGCG CCACACTAGT chrXI:379203-380122 + 67 4.44e-10 ACAGATTAAT AGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCT chrIV:884212-884573 + 18 5.80e-10 CTTTCGAAAA TGCTCGTGTAGCTCAGTGGTTAGAGCT TCGTGCTTAT chrXVI:689380-689842 + 3 6.62e-10 TT GGGCACTATGGCCGAGTGGTTAAGGCG ACAGACTTGA chrXIV:102491-102973 + 33 6.62e-10 ATATATTATA AGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:228010-228623 + 64 6.62e-10 ATAAAATATT AGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXII:975791-976270 - 51 6.62e-10 CGGAAATAAA AGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrXV:487259-487698 + 10 6.62e-10 AACAAAGTT AGACTCCATGGCCAAGTTGGTTAAGGC GTGCGACTGT chrVII:823263-823701 + 49 8.57e-10 CCAATAAGAG TGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:372196-372756 - 67 8.57e-10 TAAAACC TGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrXIII:586412-586951 - 53 8.57e-10 CAACTTACTA TGGTTTCGTGGTCTAGTCGGTTATGGC ATCTGCTTAA chrIII:127525-127863 + 71 1.25e-09 CAAGATAAAA TGACTCCATGGCCAAGTTGGTTAAGGC GTG chrXII:731941-732323 + 7 1.41e-09 ATACAA TGGGAGTTTGGCCGAGTGGTTTAAGGC GTCAGATTTA chrIV:1175579-1176051 + 63 3.23e-09 TACAAAACAA AGCTTCAGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrIV:359370-359780 + 51 4.04e-09 CGAAGAACTC ATCCTTGTTAGCTCAGTTGGTAGAGCG TTCGGCTTTT chrXI:578544-579346 + 69 4.04e-09 CGAAGAACTC ATCCTTGTTAGCTCAGTTGGTAGAGCG TTCGG chrX:390787-390887 - 73 5.60e-09 G TGCTTCAGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrX:422735-422835 + 11 5.60e-09 ATCCTTTGTA TGCTTCAGTAGCTCAGTAGGAAGAGCG TCAGTCTCAT chrXIV:374688-375092 + 28 1.88e-08 CAGAAAAATA AGCGGACTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXVI:860064-860696 + 48 2.49e-08 GTAAATAACA AGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrIV:83334-83786 + 37 2.49e-08 AAGTTCACTT AGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrVI:157682-158284 - 49 4.64e-08 CATAAATAGA AGCGGATTTAGCTCAGTTGGGAGAGCG CCAGACTGAA chrXIII:195948-196407 - 18 5.50e-08 CAAGTTCACA AGGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXII:92238-92896 + 30 5.50e-08 CAAGTTAATA AGGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrXIII:183759-184173 - 27 5.98e-08 CAATAAAGAT CGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXV:281846-282574 + 3 5.98e-08 AG CGCGCAAGTGGTTTAGTGGTAAAATCC AACGTTGCCA chrXVI:743890-744652 + 62 7.05e-08 ACAGTGTAAA AGCCTCCTTAGCTTAGTGGTAGAGCGT TGCACTTGTA chrIII:168024-168640 - 65 7.64e-08 AAGAAGTCC TGGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrV:130802-131442 - 56 9.70e-08 AATAATTAAG AGGTTTTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrXII:448521-448947 - 12 1.13e-07 CAAGAAGTTC CGGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrIV:802596-802973 - 43 1.13e-07 CATGAATTGT CGGTCCTATAGTGTAGTGGTTATCACT TTCGGTTTTG chrXV:300861-301423 + 4 1.22e-07 GAT CGGGCGTGTGGTCTAGTGGTATGATTC TCGCTTTGGG chrX:374203-374303 - 52 1.22e-07 AACAAATAGT AGCTCGCGTGGCGTAATGGCAACGCGT CTGACTTCTA chrXIII:747711-748148 - 59 1.22e-07 ACATATGACT AGCTCGCGTGGCGTAATGGCAACGCGT CTGACTTCTA chrX:355106-355206 + 13 1.22e-07 AACAAACAGT AGCTCGCGTGGCGTAATGGCAACGCGT CTGACTTCTA chrVII:405216-405729 + 47 1.22e-07 AACAAACAGT AGCTCGCGTGGCGTAATGGCAACGCGT CTGACTTCTA chrVII:110424-110930 - 44 2.35e-07 AATAATTACC TGCCATCTTAGTATAGTGGTTAGTACA CATCGTTGTG chrVIII:62500-63069 + 20 2.35e-07 TAAAATCATA TGCCATCTTAGTATAGTGGTTAGTACA CATCGTTGTG chrX:542763-542863 - 47 2.70e-07 ACAATTAAAT ACTCTCGGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXIII:837717-838104 + 67 2.70e-07 CAGTTAATTG ACTCTCGGTAGCCAAGTTGGTTTAAGG CGCAAGA chrXIII:168616-169028 + 22 2.70e-07 CAAAATAGTC ACTCTCGGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrV:434398-434749 - 64 3.30e-07 ATTGAAAAGT CGCCATCTTAGTATAGTGGTTAGTACA CATCGTTGTG chrV:207123-207674 + 8 3.30e-07 ATAAGTT CGCCATCTTAGTATAGTGGTTAGTACA CATCGTTGTG chrXV:288012-288396 + 37 3.76e-07 AAAAATAGCT TCTCTCGGTAGCCAAGTTGGTTTAAGG CGCAAGACTG chrXVI:435669-436189 - 60 4.28e-07 ATACAACAAA AGCTCGTATGGCGCAGTGGTAGCGCAG CAGATTGCAA chrII:326579-327058 - 72 5.16e-07 CC GGGTCCAATGGTCCAGTGGTTCAAGAC GTCGCCTTTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSYYNYDTGGCSYAGTKGKTARAGSS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:197052-197152 2.5e-12 71_[-2]_2 chrXI:517750-518301 6.8e-12 11_[+2]_62 chrII:197240-197832 1.2e-11 6_[+2]_67 chrII:226882-227360 1.4e-11 2_[+2]_71 chrI:166056-166567 1.4e-11 4_[+2]_69 chrIV:980776-981247 1.4e-11 68_[-2]_5 chrVII:121954-122604 2.4e-11 38_[+2]_35 chrIV:1352320-1352712 2.4e-11 46_[-2]_27 chrVII:876039-876830 2.4e-11 8_[+2]_65 chrV:288236-288736 2.4e-11 62_[-2]_11 chrX:414738-414838 2.4e-11 27_[+2]_46 chrXIII:480373-480922 2.4e-11 70_[-2]_3 chrV:435674-436009 2.4e-11 7_[-2]_66 chrIX:300108-300493 2.4e-11 24_[-2]_49 chrXIV:602093-602526 2.9e-11 51_[+2]_22 chrIX:183313-183670 2.9e-11 46_[-2]_27 chrXII:167794-168250 3.4e-11 27_[-2]_46 chrXIII:259017-259463 3.4e-11 23_[-2]_50 chrIII:227658-228218 5.6e-11 52_[+2]_21 chrII:266198-266647 1.1e-10 4_[+2]_69 chrXI:379203-380122 4.4e-10 66_[+2]_7 chrIV:884212-884573 5.8e-10 17_[+2]_56 chrXVI:689380-689842 6.6e-10 2_[+2]_71 chrXIV:102491-102973 6.6e-10 32_[+2]_41 chrXV:228010-228623 6.6e-10 63_[+2]_10 chrXII:975791-976270 6.6e-10 50_[-2]_23 chrXV:487259-487698 6.6e-10 9_[+2]_64 chrVII:823263-823701 8.6e-10 48_[+2]_25 chrXIII:372196-372756 8.6e-10 66_[-2]_7 chrXIII:586412-586951 8.6e-10 52_[-2]_21 chrIII:127525-127863 1.3e-09 70_[+2]_3 chrXII:731941-732323 1.4e-09 6_[+2]_67 chrIV:1175579-1176051 3.2e-09 62_[+2]_11 chrIV:359370-359780 4e-09 50_[+2]_23 chrXI:578544-579346 4e-09 68_[+2]_5 chrX:390787-390887 5.6e-09 72_[-2]_1 chrX:422735-422835 5.6e-09 10_[+2]_63 chrXIV:374688-375092 1.9e-08 27_[+2]_46 chrXVI:860064-860696 2.5e-08 47_[+2]_26 chrIV:83334-83786 2.5e-08 36_[+2]_37 chrVI:157682-158284 4.6e-08 48_[-2]_25 chrXIII:195948-196407 5.5e-08 17_[-2]_56 chrXII:92238-92896 5.5e-08 29_[+2]_44 chrXIII:183759-184173 6e-08 26_[-2]_47 chrXV:281846-282574 6e-08 2_[+2]_71 chrXVI:743890-744652 7e-08 61_[+2]_12 chrIII:168024-168640 7.6e-08 64_[-2]_9 chrV:130802-131442 9.7e-08 55_[-2]_18 chrXII:448521-448947 1.1e-07 11_[-2]_62 chrIV:802596-802973 1.1e-07 42_[-2]_31 chrXV:300861-301423 1.2e-07 3_[+2]_70 chrX:374203-374303 1.2e-07 51_[-2]_22 chrXIII:747711-748148 1.2e-07 58_[-2]_15 chrX:355106-355206 1.2e-07 12_[+2]_61 chrVII:405216-405729 1.2e-07 46_[+2]_27 chrVII:110424-110930 2.4e-07 43_[-2]_30 chrVIII:62500-63069 2.4e-07 19_[+2]_54 chrX:542763-542863 2.7e-07 46_[-2]_27 chrXIII:837717-838104 2.7e-07 66_[+2]_7 chrXIII:168616-169028 2.7e-07 21_[+2]_52 chrV:434398-434749 3.3e-07 63_[-2]_10 chrV:207123-207674 3.3e-07 7_[+2]_66 chrXV:288012-288396 3.8e-07 36_[+2]_37 chrXVI:435669-436189 4.3e-07 59_[-2]_14 chrII:326579-327058 5.2e-07 71_[-2]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSYYNYDTGGCSYAGTKGKTARAGSS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WGSYYNYDTGGCSYAGTKGKTARAGSS width=27 seqs=65 chrX:197052-197152 ( 72) AGGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrXI:517750-518301 ( 12) TGGGCGTGTGGCGTAGTCGGTAGCGCG 1 chrII:197240-197832 ( 7) AGGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrII:226882-227360 ( 3) AGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrI:166056-166567 ( 5) TGGGCACATGGCGCAGTTGGTAGCGCG 1 chrIV:980776-981247 ( 69) AGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrVII:121954-122604 ( 39) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrIV:1352320-1352712 ( 47) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrVII:876039-876830 ( 9) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrV:288236-288736 ( 63) AGGCACTATGGCCGAGTGGTTAAGGCG 1 chrX:414738-414838 ( 28) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrXIII:480373-480922 ( 71) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrV:435674-436009 ( 8) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrIX:300108-300493 ( 25) AGCCTTGTTGGCGCAATCGGTAGCGCG 1 chrXIV:602093-602526 ( 52) TGGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrIX:183313-183670 ( 47) TGGTCTCTTGGCCCAGTTGGTTAAGGC 1 chrXII:167794-168250 ( 28) TGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrXIII:259017-259463 ( 24) TGGCAACTTGGCCGAGTGGTTAAGGCG 1 chrIII:227658-228218 ( 53) TGGCACTATGGCCGAGTGGTTAAGGCG 1 chrII:266198-266647 ( 5) TGCTTCTATGGCCAAGTTGGTAAGGCG 1 chrXI:379203-380122 ( 67) AGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrIV:884212-884573 ( 18) TGCTCGTGTAGCTCAGTGGTTAGAGCT 1 chrXVI:689380-689842 ( 3) GGGCACTATGGCCGAGTGGTTAAGGCG 1 chrXIV:102491-102973 ( 33) AGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXV:228010-228623 ( 64) AGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXII:975791-976270 ( 51) AGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXV:487259-487698 ( 10) AGACTCCATGGCCAAGTTGGTTAAGGC 1 chrVII:823263-823701 ( 49) TGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXIII:372196-372756 ( 67) TGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrXIII:586412-586951 ( 53) TGGTTTCGTGGTCTAGTCGGTTATGGC 1 chrIII:127525-127863 ( 71) TGACTCCATGGCCAAGTTGGTTAAGGC 1 chrXII:731941-732323 ( 7) TGGGAGTTTGGCCGAGTGGTTTAAGGC 1 chrIV:1175579-1176051 ( 63) AGCTTCAGTAGCTCAGTAGGAAGAGCG 1 chrIV:359370-359780 ( 51) ATCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrXI:578544-579346 ( 69) ATCCTTGTTAGCTCAGTTGGTAGAGCG 1 chrX:390787-390887 ( 73) TGCTTCAGTAGCTCAGTAGGAAGAGCG 1 chrX:422735-422835 ( 11) TGCTTCAGTAGCTCAGTAGGAAGAGCG 1 chrXIV:374688-375092 ( 28) AGCGGACTTAGCTCAGTTGGGAGAGCG 1 chrXVI:860064-860696 ( 48) AGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrIV:83334-83786 ( 37) AGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrVI:157682-158284 ( 49) AGCGGATTTAGCTCAGTTGGGAGAGCG 1 chrXIII:195948-196407 ( 18) AGGGCGTGTGGTCTAGTGGTATGATTC 1 chrXII:92238-92896 ( 30) AGGGCGTGTGGTCTAGTGGTATGATTC 1 chrXIII:183759-184173 ( 27) CGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrXV:281846-282574 ( 3) CGCGCAAGTGGTTTAGTGGTAAAATCC 1 chrXVI:743890-744652 ( 62) AGCCTCCTTAGCTTAGTGGTAGAGCGT 1 chrIII:168024-168640 ( 65) TGGTCCTATAGTGTAGTGGTTATCACT 1 chrV:130802-131442 ( 56) AGGTTTTATAGTGTAGTGGTTATCACT 1 chrXII:448521-448947 ( 12) CGGTCCTATAGTGTAGTGGTTATCACT 1 chrIV:802596-802973 ( 43) CGGTCCTATAGTGTAGTGGTTATCACT 1 chrXV:300861-301423 ( 4) CGGGCGTGTGGTCTAGTGGTATGATTC 1 chrX:374203-374303 ( 52) AGCTCGCGTGGCGTAATGGCAACGCGT 1 chrXIII:747711-748148 ( 59) AGCTCGCGTGGCGTAATGGCAACGCGT 1 chrX:355106-355206 ( 13) AGCTCGCGTGGCGTAATGGCAACGCGT 1 chrVII:405216-405729 ( 47) AGCTCGCGTGGCGTAATGGCAACGCGT 1 chrVII:110424-110930 ( 44) TGCCATCTTAGTATAGTGGTTAGTACA 1 chrVIII:62500-63069 ( 20) TGCCATCTTAGTATAGTGGTTAGTACA 1 chrX:542763-542863 ( 47) ACTCTCGGTAGCCAAGTTGGTTTAAGG 1 chrXIII:837717-838104 ( 67) ACTCTCGGTAGCCAAGTTGGTTTAAGG 1 chrXIII:168616-169028 ( 22) ACTCTCGGTAGCCAAGTTGGTTTAAGG 1 chrV:434398-434749 ( 64) CGCCATCTTAGTATAGTGGTTAGTACA 1 chrV:207123-207674 ( 8) CGCCATCTTAGTATAGTGGTTAGTACA 1 chrXV:288012-288396 ( 37) TCTCTCGGTAGCCAAGTTGGTTTAAGG 1 chrXVI:435669-436189 ( 60) AGCTCGTATGGCGCAGTGGTAGCGCAG 1 chrII:326579-327058 ( 72) GGGTCCAATGGTCCAGTGGTTCAAGAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSYYNYDTGGCSYAGTKGKTARAGSS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 27 n= 44400 bayes= 9.43168 E= 2.1e-182 82 -79 -260 -3 -1267 -160 228 -335 -203 131 110 -235 -1267 131 10 11 -76 92 -260 46 -89 79 -1 4 -135 116 10 -26 -35 -1267 104 24 -1267 -1267 -1267 167 4 -1267 186 -1267 -1267 -1267 242 -1267 -1267 189 -1267 -3 -235 126 65 -65 -103 79 -60 35 167 -1267 -1267 -1267 -89 -1267 216 -1267 -1267 -1267 -1267 167 -276 10 135 -18 -1267 -1267 242 -1267 -1267 -160 149 41 -35 -1267 -260 121 104 -360 -260 -3 41 -128 104 -135 51 21 21 -135 -76 -101 172 -154 -335 165 86 -276 -235 79 131 -103 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSYYNYDTGGCSYAGTKGKTARAGSS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 27 nsites= 65 E= 2.1e-182 0.553846 0.107692 0.030769 0.307692 0.000000 0.061538 0.907692 0.030769 0.076923 0.461538 0.400000 0.061538 0.000000 0.461538 0.200000 0.338462 0.184615 0.353846 0.030769 0.430769 0.169231 0.323077 0.184615 0.323077 0.123077 0.415385 0.200000 0.261538 0.246154 0.000000 0.384615 0.369231 0.000000 0.000000 0.000000 1.000000 0.323077 0.000000 0.676923 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.692308 0.000000 0.307692 0.061538 0.446154 0.292308 0.200000 0.153846 0.323077 0.123077 0.400000 1.000000 0.000000 0.000000 0.000000 0.169231 0.000000 0.830769 0.000000 0.000000 0.000000 0.000000 1.000000 0.046154 0.200000 0.476923 0.276923 0.000000 0.000000 1.000000 0.000000 0.000000 0.061538 0.523077 0.415385 0.246154 0.000000 0.030769 0.723077 0.646154 0.015385 0.030769 0.307692 0.415385 0.076923 0.384615 0.123077 0.446154 0.215385 0.215385 0.123077 0.184615 0.092308 0.615385 0.107692 0.030769 0.584615 0.338462 0.046154 0.061538 0.323077 0.461538 0.153846 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSYYNYDTGGCSYAGTKGKTARAGSS MEME-2 regular expression -------------------------------------------------------------------------------- [AT]G[CG][CTG][TC][CT][CTG][GTA]T[GA]G[CT][CGT][TC]AGT[GTC]G[GT][TA][AT][AG][ACG]G[CG][GC] -------------------------------------------------------------------------------- Time 674.77 secs. ******************************************************************************** ******************************************************************************** MOTIF RAAAAAAAAAAAARAARAWAM MEME-3 width = 21 sites = 79 llr = 878 E-value = 3.5e-048 ******************************************************************************** -------------------------------------------------------------------------------- Motif RAAAAAAAAAAAARAARAWAM MEME-3 Description -------------------------------------------------------------------------------- Simplified A 57698787897754a967676 pos.-specific C ::::::1:::::11:::11:4 probability G 332:1313211224:14212: matrix T 2:2:11::::2121::::31: bits 2.4 2.2 1.9 1.7 Relative 1.5 * Entropy 1.2 * * * (16.0 bits) 1.0 * * ** ** * 0.7 * ********* **** ** 0.5 ************ **** ** 0.2 ************ ******** 0.0 --------------------- Multilevel AAAAAAAAAAAAAAAAAAAAA consensus GGG G GG T TG GGTGC sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAAAAAAAAAAAARAARAWAM MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXII:644717-645714 + 71 3.01e-10 TATTGTAAAA AAAAAAAAAAAAGGAAGAAAA AAGCAAGAT chrXIV:88936-89765 - 16 5.30e-10 AGATGTGAGA GAAAAAAAAAAAAGAAAATAA AGGAAAATGG chrVII:930592-931218 + 77 2.35e-09 TACTATTCAG GGAAAAAAGAAAAGAAAAAAA TGC chrVII:574630-575837 - 71 6.52e-09 GATCCAGTG GAAAAGAGGAAAAGAAAAAAA AATACGAAAA chrVIII:214128-214368 - 57 2.22e-08 CCAGATTTCG AATAAAAAAAAAAAAAAAAGC TATTCATGGT chrXVI:168696-170362 - 68 3.20e-08 TAGAAAGAAC AAAAAAAAGAAAGAAAAAAGC ACCGTAAAAA chrXV:342793-343381 + 13 1.00e-07 TGGTGTCATA AAGAAGAGAAAAACAAGATAA GATCTCCACA chrVI:106175-106459 - 3 1.16e-07 CCACCTGGAC AAAAAAAAAAAAAGAGAGAGA AG chrX:531616-531716 - 11 1.55e-07 TTATTTTCCA GAAAAAAAGAAAAGAAACTGC GCAAGCCCGG chrVIII:126466-127762 - 22 1.55e-07 ACAGCTGTGT AAAAAAAGGAAGGAAAAGAAA TAGTTAGTAA chrVII:535445-535814 - 78 1.79e-07 AC AGTAAAAGAAAATAAAAATAA CGTAATATTA chrII:478964-479562 + 63 1.79e-07 TCGAAACAAA AAAAAAAAAAATGGAAAAAGC TGCTATCAAC chrVIII:374605-376231 + 37 2.05e-07 GTTGAAGAGG AGAAAAAAAAAAAGAGAGAGC CGTACCGCAA chrXIV:415139-416188 - 39 2.05e-07 GCTAGCACTT AAAAAAAGGAAAACAAAGTAA ATGATTTCTG chrXII:875267-875656 - 60 2.35e-07 AAAGGAAGTT GATAAAAAAAAAGTAAAGAAC TCCTCATAGG chrII:477183-477760 - 80 2.35e-07 . GGAAAAAAAAAAATAGGAAAA GCCAGAAATA chrXIII:631299-634863 + 54 2.68e-07 GAAGTCGATG AAGAAGAAGAAGAAAAGAAGC CAAAAACCAA chrXV:1003947-1004920 - 18 2.68e-07 ATAAAAGTAC AAGAAAAGGAGAAGAAGAAAA ATTTTTGACT chrIV:1354452-1355580 - 32 3.06e-07 TCAAATTGCA AGAAGAAGAAAGAGAAAGAAA GGATCAATAC chrIV:601389-602343 - 48 3.95e-07 GCCTAGAAGT GAAAAACGAATAACAAAAAAA TAACATAATA chrIV:892204-892987 + 37 3.95e-07 TGGAATTTTC TAGAAGAAAAAACAAAGAAGC CTCGCAACAA chrXIV:197972-198478 - 62 4.48e-07 GGAGGAGGAA GAGAGACGAAAAAAAAAAAAA TGACTAAAAA chrVIII:475284-475888 + 14 4.48e-07 TCGCATCACC AAAAAAAAAAAAAAATGATAC AAAGACTGGG chrXVI:282131-283253 - 1 5.06e-07 GACGTACACT AAAAAAAAAAAAGGAATAAAA chrIII:141805-143367 + 29 5.72e-07 AATTCTTATG AAAAAAAAAATGTGAAAGAGA GTAGAAAATT chrIII:162079-164299 + 23 5.72e-07 TTTGAAGTTG AGAAAAAAAAAGAGATGAAAA AGTTAACTTA chrIV:550348-550786 + 69 6.44e-07 TTACCTTAGG GGAAAGAAAATATTAAGAAAC AATATCTTAC chrIV:1305373-1306085 - 80 8.13e-07 . TAAAGAAAAAAACAAAAGAAA TTGACTGACA chrXII:448521-448947 - 77 9.12e-07 TCA AATATGAAAAAAAGAAGAGAA CGTCAACAAT chrI:180927-181676 - 4 9.12e-07 TATGAAGTAT AGGAGGAAAAAGAAAAAATAA TGG chrVII:609300-610079 + 79 1.02e-06 AAACAGACCG AGGGAGAAAAAAAAAAGGAAC T chrX:415637-415737 + 12 1.02e-06 ACGATATGGT GCAAAAAAAATAAAAAAATAA ATTGAAACGG chrXI:518760-519648 + 32 1.14e-06 GGTCGTGCGG AAAAAGAAAAAAGCAGACAAA ACAAAATTTT chrIV:453520-454360 - 68 1.75e-06 GGAGTAGCGA GAAAAACAAAAATAAAAGGGC GGAAACATAA chrXV:382468-383772 + 49 1.75e-06 TCATTACATC AGAATGCGAAAAAAAAAAAGC GAGAATATCT chrVII:147202-148976 + 3 1.75e-06 AG GCGAAAAAAAAATCAAAAAAA TTATACTTCG chrXIII:145795-146175 - 73 1.95e-06 AAAAAGG TAAACAAGAAAAGGAAGAAAA GAACCCAGAA chrIX:210532-211242 + 53 1.95e-06 GCAATGAGAA TGGAAAAAAAATTAAAAAAAC TCACATATAA chrV:364194-364510 + 69 2.16e-06 GAAGCACCAA GAAAAAAGGAAGTTAAACAAA ACACTGATTC chrV:151260-153037 + 17 2.16e-06 AAGGTTTCAA GAAAAGGAAAAGAAAAACTAA ACGTAGTATA chrXII:932184-932483 + 31 3.21e-06 CACGGATGTA GAGAAACAGAAACGAGGATAA TAAAATCGGT chrV:353392-354012 + 7 3.21e-06 CGATGA AGAAAAAAAATAATAACATAC ATTGTACCTT chrXI:574607-576470 - 72 3.54e-06 ACCACTGA AAAAAAAGAAAACGAACAATA CTAAGCTACA chrXI:313172-313669 + 13 3.89e-06 CCATGAAGGC TAAAGGAAAAAAATAAAATGC CATCTCCTAG chrIII:107091-107788 + 64 3.89e-06 ACGTTTCCTG AGTATAAGAAAAATAAGCAAA ATAAGTATAC chrVII:914620-915269 + 33 4.28e-06 TATCTATTCG AGAAAAAAAAAAAAAGGCATC GAGTGAATTT chrVI:210442-210809 + 8 4.28e-06 TATTAAT GAAAAAATAAAGCCAAAAAAA TTTCAGAAAA chrIV:158982-159662 - 20 4.70e-06 AGCCATTCAA GGGAAGAAAATTAAAAGATGC TTTATTTTTA chrXII:83953-84685 + 60 4.70e-06 ATGCGGACGC GGAAGGAAGGAAGGAAGCAAA CCCTTCCGTC chrIV:322181-323623 + 28 5.15e-06 TTTCCAGAAA GAGAAACGAAGAAGAAGACGC CAAGAACCCA chrIV:1021261-1022427 - 4 5.15e-06 CACCGCAGTC AAGAAAACAGTAGGAAAAAAA CTG chrI:141339-143739 - 8 5.65e-06 GAACAAAAAA GGAAAAAAAAATAACAGATAA CTAATAA chrXIII:267241-268834 - 69 6.76e-06 AGTATTTTCA AATATTAAAAAAGAAAAATAA ATATTTTGTT chrXVI:376949-377400 - 41 6.76e-06 TTTTTTATAT AATTAACAAAAAGAAAAATAA TCATATGTAT chrVII:400853-401739 - 42 7.38e-06 TAAAGTAAAA AAATTAAGAATAAAAAGAAAA ATGGGTGCTT chrIV:1256747-1257290 + 6 7.38e-06 AACTT GAAAATAGAGTATAAAAAAAA ATTGCACAAA chrVII:561116-561903 + 13 8.06e-06 TTTATGTAAA TGAAAAAGAATGTGAACAAAA ATTGAAAAAA chrXVI:678905-680095 - 4 8.78e-06 GCAGAAAAGG AAAATGCAAGAGCGAAAAAAA AAA chrXIII:131567-132060 + 44 9.56e-06 TAGCATATTC AAAAAAGAAGAAACAAAGCAC TCACGATGGG chrXIII:767337-767594 - 50 1.04e-05 AGGAGATTGT TGTAAACGAGAATGAAGATAC CATTTCTGAT chrXII:214610-215156 + 21 1.33e-05 AATTGTTAAA AATAAAGGAGAATAAAAGTAA AAAATAAATG chrXIV:632442-632907 - 45 1.45e-05 CAAGACTATC TGAAATAAGAAAAAAAACGAC CCCAGTGAGG chrI:182365-182732 + 9 1.45e-05 ATATCATC AGTAAAAAAAAATAACGACAA CTGCAGGACT chrXIII:9677-10535 + 13 1.45e-05 GTTCTTTCGG AATGAAAGAATATAAAAATGA AGGGTTACCT chrVIII:168360-168758 - 68 1.57e-05 ATATGACACA AGGAAGATAAGATAAAAAAAA CCAAGCGCTT chrXIII:807689-808542 - 79 1.70e-05 A AAGGTAAGAAAAAGAAACCAA CCTCTATACA chrII:350640-351110 - 73 1.70e-05 TAATTCA TGAAAAAATATATAAAAATAA GGTCTTACCC chrXIII:353423-353664 - 5 1.84e-05 ACAACGAGTA ATAAAAAAGAAAAGCAGAAAC GCCA chrII:237695-238136 + 19 1.84e-05 TTAGAAATCA TAAATAAAAAATCAAAGAGAC AAATCTCGTT chrII:431428-432212 - 55 2.14e-05 CCCTGTGCAC TAATAGAAGAAAACAAGAGAC TCCGTCCCTC chrXV:832265-832854 - 45 2.14e-05 AGTTCTCCCT AAGAATAAAATAGTAAAGGAA GCTATTGCTA chrXVI:622426-623136 - 42 2.14e-05 TCAGGCTCAA AATAAAAGGGGACAAAACAAA ACGTGCCGGT chrVIII:84756-85562 + 29 2.31e-05 TTATCGAAAT GATAAACAAATAAGAAAGCTC AGAGGGCCTC chrXI:112753-114661 - 23 2.89e-05 AAGATTCATT GATAAGAATAAGGAAAAACGA GTAGGCATAT chrII:591585-591794 + 31 3.34e-05 TACATATATC TAAAAGGAAAAAGTATAAAAA TTATGCAGGT chrVII:702835-703965 + 1 4.14e-05 . AAGAAGAAGATACTAGGGTGA TCTATTCTAG chrII:301037-301610 - 2 4.44e-05 CTTATGTATG TATATAAAAAATAAAAGAATA T chrXI:431890-432477 + 27 4.75e-05 ACTTGTAAAC GATAAGTAAATGTGAAAATAC ACATTGCGAT chrII:168402-170428 - 42 7.56e-05 ATAAAACATA TATAGAACAATGAGAAGGTAC GTAATTTCTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAAAAAAAAAAAARAARAWAM MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXII:644717-645714 3e-10 70_[+3]_9 chrXIV:88936-89765 5.3e-10 15_[-3]_64 chrVII:930592-931218 2.3e-09 76_[+3]_3 chrVII:574630-575837 6.5e-09 70_[-3]_9 chrVIII:214128-214368 2.2e-08 56_[-3]_23 chrXVI:168696-170362 3.2e-08 67_[-3]_12 chrXV:342793-343381 1e-07 12_[+3]_67 chrVI:106175-106459 1.2e-07 2_[-3]_77 chrX:531616-531716 1.5e-07 10_[-3]_69 chrVIII:126466-127762 1.5e-07 21_[-3]_58 chrVII:535445-535814 1.8e-07 77_[-3]_2 chrII:478964-479562 1.8e-07 62_[+3]_17 chrVIII:374605-376231 2.1e-07 36_[+3]_43 chrXIV:415139-416188 2.1e-07 38_[-3]_41 chrXII:875267-875656 2.3e-07 59_[-3]_20 chrII:477183-477760 2.3e-07 79_[-3] chrXIII:631299-634863 2.7e-07 53_[+3]_26 chrXV:1003947-1004920 2.7e-07 17_[-3]_62 chrIV:1354452-1355580 3.1e-07 31_[-3]_48 chrIV:601389-602343 4e-07 47_[-3]_32 chrIV:892204-892987 4e-07 36_[+3]_43 chrXIV:197972-198478 4.5e-07 61_[-3]_18 chrVIII:475284-475888 4.5e-07 13_[+3]_66 chrXVI:282131-283253 5.1e-07 [-3]_79 chrIII:141805-143367 5.7e-07 28_[+3]_51 chrIII:162079-164299 5.7e-07 22_[+3]_57 chrIV:550348-550786 6.4e-07 68_[+3]_11 chrIV:1305373-1306085 8.1e-07 79_[-3] chrXII:448521-448947 9.1e-07 76_[-3]_3 chrI:180927-181676 9.1e-07 3_[-3]_76 chrVII:609300-610079 1e-06 78_[+3]_1 chrX:415637-415737 1e-06 11_[+3]_68 chrXI:518760-519648 1.1e-06 31_[+3]_48 chrIV:453520-454360 1.8e-06 67_[-3]_12 chrXV:382468-383772 1.8e-06 48_[+3]_31 chrVII:147202-148976 1.8e-06 2_[+3]_77 chrXIII:145795-146175 1.9e-06 72_[-3]_7 chrIX:210532-211242 1.9e-06 52_[+3]_27 chrV:364194-364510 2.2e-06 68_[+3]_11 chrV:151260-153037 2.2e-06 16_[+3]_63 chrXII:932184-932483 3.2e-06 30_[+3]_49 chrV:353392-354012 3.2e-06 6_[+3]_73 chrXI:574607-576470 3.5e-06 71_[-3]_8 chrXI:313172-313669 3.9e-06 12_[+3]_67 chrIII:107091-107788 3.9e-06 63_[+3]_16 chrVII:914620-915269 4.3e-06 32_[+3]_47 chrVI:210442-210809 4.3e-06 7_[+3]_72 chrIV:158982-159662 4.7e-06 19_[-3]_60 chrXII:83953-84685 4.7e-06 59_[+3]_20 chrIV:322181-323623 5.2e-06 27_[+3]_52 chrIV:1021261-1022427 5.2e-06 3_[-3]_76 chrI:141339-143739 5.6e-06 7_[-3]_72 chrXIII:267241-268834 6.8e-06 68_[-3]_11 chrXVI:376949-377400 6.8e-06 40_[-3]_39 chrVII:400853-401739 7.4e-06 41_[-3]_38 chrIV:1256747-1257290 7.4e-06 5_[+3]_74 chrVII:561116-561903 8.1e-06 12_[+3]_67 chrXVI:678905-680095 8.8e-06 3_[-3]_76 chrXIII:131567-132060 9.6e-06 43_[+3]_36 chrXIII:767337-767594 1e-05 49_[-3]_30 chrXII:214610-215156 1.3e-05 20_[+3]_59 chrXIV:632442-632907 1.4e-05 44_[-3]_35 chrI:182365-182732 1.4e-05 8_[+3]_71 chrXIII:9677-10535 1.4e-05 12_[+3]_67 chrVIII:168360-168758 1.6e-05 67_[-3]_12 chrXIII:807689-808542 1.7e-05 78_[-3]_1 chrII:350640-351110 1.7e-05 72_[-3]_7 chrXIII:353423-353664 1.8e-05 4_[-3]_75 chrII:237695-238136 1.8e-05 18_[+3]_61 chrII:431428-432212 2.1e-05 54_[-3]_25 chrXV:832265-832854 2.1e-05 44_[-3]_35 chrXVI:622426-623136 2.1e-05 41_[-3]_38 chrVIII:84756-85562 2.3e-05 28_[+3]_51 chrXI:112753-114661 2.9e-05 22_[-3]_57 chrII:591585-591794 3.3e-05 30_[+3]_49 chrVII:702835-703965 4.1e-05 [+3]_79 chrII:301037-301610 4.4e-05 1_[-3]_78 chrXI:431890-432477 4.8e-05 26_[+3]_53 chrII:168402-170428 7.6e-05 41_[-3]_38 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAAAAAAAAAAAARAARAWAM MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RAAAAAAAAAAAARAARAWAM width=21 seqs=79 chrXII:644717-645714 ( 71) AAAAAAAAAAAAGGAAGAAAA 1 chrXIV:88936-89765 ( 16) GAAAAAAAAAAAAGAAAATAA 1 chrVII:930592-931218 ( 77) GGAAAAAAGAAAAGAAAAAAA 1 chrVII:574630-575837 ( 71) GAAAAGAGGAAAAGAAAAAAA 1 chrVIII:214128-214368 ( 57) AATAAAAAAAAAAAAAAAAGC 1 chrXVI:168696-170362 ( 68) AAAAAAAAGAAAGAAAAAAGC 1 chrXV:342793-343381 ( 13) AAGAAGAGAAAAACAAGATAA 1 chrVI:106175-106459 ( 3) AAAAAAAAAAAAAGAGAGAGA 1 chrX:531616-531716 ( 11) GAAAAAAAGAAAAGAAACTGC 1 chrVIII:126466-127762 ( 22) AAAAAAAGGAAGGAAAAGAAA 1 chrVII:535445-535814 ( 78) AGTAAAAGAAAATAAAAATAA 1 chrII:478964-479562 ( 63) AAAAAAAAAAATGGAAAAAGC 1 chrVIII:374605-376231 ( 37) AGAAAAAAAAAAAGAGAGAGC 1 chrXIV:415139-416188 ( 39) AAAAAAAGGAAAACAAAGTAA 1 chrXII:875267-875656 ( 60) GATAAAAAAAAAGTAAAGAAC 1 chrII:477183-477760 ( 80) GGAAAAAAAAAAATAGGAAAA 1 chrXIII:631299-634863 ( 54) AAGAAGAAGAAGAAAAGAAGC 1 chrXV:1003947-1004920 ( 18) AAGAAAAGGAGAAGAAGAAAA 1 chrIV:1354452-1355580 ( 32) AGAAGAAGAAAGAGAAAGAAA 1 chrIV:601389-602343 ( 48) GAAAAACGAATAACAAAAAAA 1 chrIV:892204-892987 ( 37) TAGAAGAAAAAACAAAGAAGC 1 chrXIV:197972-198478 ( 62) GAGAGACGAAAAAAAAAAAAA 1 chrVIII:475284-475888 ( 14) AAAAAAAAAAAAAAATGATAC 1 chrXVI:282131-283253 ( 1) AAAAAAAAAAAAGGAATAAAA 1 chrIII:141805-143367 ( 29) AAAAAAAAAATGTGAAAGAGA 1 chrIII:162079-164299 ( 23) AGAAAAAAAAAGAGATGAAAA 1 chrIV:550348-550786 ( 69) GGAAAGAAAATATTAAGAAAC 1 chrIV:1305373-1306085 ( 80) TAAAGAAAAAAACAAAAGAAA 1 chrXII:448521-448947 ( 77) AATATGAAAAAAAGAAGAGAA 1 chrI:180927-181676 ( 4) AGGAGGAAAAAGAAAAAATAA 1 chrVII:609300-610079 ( 79) AGGGAGAAAAAAAAAAGGAAC 1 chrX:415637-415737 ( 12) GCAAAAAAAATAAAAAAATAA 1 chrXI:518760-519648 ( 32) AAAAAGAAAAAAGCAGACAAA 1 chrIV:453520-454360 ( 68) GAAAAACAAAAATAAAAGGGC 1 chrXV:382468-383772 ( 49) AGAATGCGAAAAAAAAAAAGC 1 chrVII:147202-148976 ( 3) GCGAAAAAAAAATCAAAAAAA 1 chrXIII:145795-146175 ( 73) TAAACAAGAAAAGGAAGAAAA 1 chrIX:210532-211242 ( 53) TGGAAAAAAAATTAAAAAAAC 1 chrV:364194-364510 ( 69) GAAAAAAGGAAGTTAAACAAA 1 chrV:151260-153037 ( 17) GAAAAGGAAAAGAAAAACTAA 1 chrXII:932184-932483 ( 31) GAGAAACAGAAACGAGGATAA 1 chrV:353392-354012 ( 7) AGAAAAAAAATAATAACATAC 1 chrXI:574607-576470 ( 72) AAAAAAAGAAAACGAACAATA 1 chrXI:313172-313669 ( 13) TAAAGGAAAAAAATAAAATGC 1 chrIII:107091-107788 ( 64) AGTATAAGAAAAATAAGCAAA 1 chrVII:914620-915269 ( 33) AGAAAAAAAAAAAAAGGCATC 1 chrVI:210442-210809 ( 8) GAAAAAATAAAGCCAAAAAAA 1 chrIV:158982-159662 ( 20) GGGAAGAAAATTAAAAGATGC 1 chrXII:83953-84685 ( 60) GGAAGGAAGGAAGGAAGCAAA 1 chrIV:322181-323623 ( 28) GAGAAACGAAGAAGAAGACGC 1 chrIV:1021261-1022427 ( 4) AAGAAAACAGTAGGAAAAAAA 1 chrI:141339-143739 ( 8) GGAAAAAAAAATAACAGATAA 1 chrXIII:267241-268834 ( 69) AATATTAAAAAAGAAAAATAA 1 chrXVI:376949-377400 ( 41) AATTAACAAAAAGAAAAATAA 1 chrVII:400853-401739 ( 42) AAATTAAGAATAAAAAGAAAA 1 chrIV:1256747-1257290 ( 6) GAAAATAGAGTATAAAAAAAA 1 chrVII:561116-561903 ( 13) TGAAAAAGAATGTGAACAAAA 1 chrXVI:678905-680095 ( 4) AAAATGCAAGAGCGAAAAAAA 1 chrXIII:131567-132060 ( 44) AAAAAAGAAGAAACAAAGCAC 1 chrXIII:767337-767594 ( 50) TGTAAACGAGAATGAAGATAC 1 chrXII:214610-215156 ( 21) AATAAAGGAGAATAAAAGTAA 1 chrXIV:632442-632907 ( 45) TGAAATAAGAAAAAAAACGAC 1 chrI:182365-182732 ( 9) AGTAAAAAAAAATAACGACAA 1 chrXIII:9677-10535 ( 13) AATGAAAGAATATAAAAATGA 1 chrVIII:168360-168758 ( 68) AGGAAGATAAGATAAAAAAAA 1 chrXIII:807689-808542 ( 79) AAGGTAAGAAAAAGAAACCAA 1 chrII:350640-351110 ( 73) TGAAAAAATATATAAAAATAA 1 chrXIII:353423-353664 ( 5) ATAAAAAAGAAAAGCAGAAAC 1 chrII:237695-238136 ( 19) TAAATAAAAAATCAAAGAGAC 1 chrII:431428-432212 ( 55) TAATAGAAGAAAACAAGAGAC 1 chrXV:832265-832854 ( 45) AAGAATAAAATAGTAAAGGAA 1 chrXVI:622426-623136 ( 42) AATAAAAGGGGACAAAACAAA 1 chrVIII:84756-85562 ( 29) GATAAACAAATAAGAAAGCTC 1 chrXI:112753-114661 ( 23) GATAAGAATAAGGAAAAACGA 1 chrII:591585-591794 ( 31) TAAAAGGAAAAAGTATAAAAA 1 chrVII:702835-703965 ( 1) AAGAAGAAGATACTAGGGTGA 1 chrII:301037-301610 ( 2) TATATAAAAAATAAAAGAATA 1 chrXI:431890-432477 ( 27) GATAAGTAAATGTGAAAATAC 1 chrII:168402-170428 ( 42) TATAGAACAATGAGAAGGTAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAAAAAAAAAAAARAARAWAM MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 10.1779 E= 3.5e-048 73 -1295 70 -82 110 -288 64 -463 86 -1295 21 -54 156 -1295 -230 -304 132 -388 -107 -146 112 -1295 51 -263 137 -56 -188 -463 107 -288 64 -363 130 -1295 12 -363 152 -1295 -88 -1295 123 -1295 -188 -54 125 -1295 -7 -204 66 -71 3 -63 41 -88 93 -131 164 -288 -1295 -1295 146 -388 -107 -304 92 -230 93 -463 110 -56 12 -1295 83 -130 -130 -11 123 -1295 21 -263 104 93 -1295 -1295 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAAAAAAAAAAAARAARAWAM MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 79 E= 3.5e-048 0.518987 0.000000 0.303797 0.177215 0.670886 0.025316 0.291139 0.012658 0.569620 0.000000 0.215190 0.215190 0.924051 0.000000 0.037975 0.037975 0.784810 0.012658 0.088608 0.113924 0.683544 0.000000 0.265823 0.050633 0.810127 0.126582 0.050633 0.012658 0.658228 0.025316 0.291139 0.025316 0.772152 0.000000 0.202532 0.025316 0.898734 0.000000 0.101266 0.000000 0.734177 0.000000 0.050633 0.215190 0.746835 0.000000 0.177215 0.075949 0.493671 0.113924 0.189873 0.202532 0.417722 0.101266 0.354430 0.126582 0.974684 0.025316 0.000000 0.000000 0.860759 0.012658 0.088608 0.037975 0.594937 0.037975 0.354430 0.012658 0.670886 0.126582 0.202532 0.000000 0.556962 0.075949 0.075949 0.291139 0.734177 0.000000 0.215190 0.050633 0.645570 0.354430 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAAAAAAAAAAAARAARAWAM MEME-3 regular expression -------------------------------------------------------------------------------- [AG][AG][AGT]AA[AG]A[AG][AG]A[AT]A[AT][AG]AA[AG][AG][AT][AG][AC] -------------------------------------------------------------------------------- Time 989.47 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:405657-406272 6.23e-07 6_[+1(2.74e-09)]_74 chrVIII:119707-121715 7.04e-01 100 chrXIV:631701-632107 2.91e-11 [-1(1.98e-13)]_17_[-2(1.36e-05)]_36 chrVII:88429-89258 5.88e-01 100 chrXI:163275-164490 8.03e-01 100 chrI:180927-181676 4.03e-04 3_[-3(9.12e-07)]_76 chrIV:1256747-1257290 4.94e-10 5_[+3(7.38e-06)]_22_[-1(8.31e-12)]_\ 32 chrXVI:818666-819782 1.68e-01 100 chrXIII:420381-421052 5.46e-01 100 chrVII:405216-405729 9.75e-05 46_[+2(1.22e-07)]_27 chrVII:310100-312658 8.88e-01 100 chrXI:307761-308448 7.22e-01 100 chrIV:679638-680021 5.04e-02 100 chrIII:162079-164299 3.09e-03 22_[+3(5.72e-07)]_57 chrXVI:352205-353120 6.57e-01 100 chrIV:1095018-1095705 7.57e-05 67_[-1(6.68e-07)]_13 chrXI:490081-491450 7.71e-01 100 chrIX:386653-387289 1.56e-01 24_[-3(9.14e-05)]_55 chrXIV:391998-393049 9.38e-01 100 chrIV:980776-981247 2.17e-11 21_[-1(1.30e-07)]_27_[-2(1.44e-11)]_\ 5 chrXII:242183-243630 5.18e-01 100 chrIX:370243-370565 1.76e-01 100 chrII:372338-377406 8.88e-01 100 chrXI:364410-365176 6.06e-02 100 chrXVI:55807-56518 5.56e-05 65_[-1(6.57e-08)]_15 chrVII:323384-323858 1.79e-01 100 chrXV:618680-624904 3.08e-01 100 chrXII:5561-5837 4.04e-01 100 chrVII:794737-794989 7.17e-01 100 chrXV:758795-759548 4.94e-01 100 chrXIII:13352-14316 6.92e-01 100 chrV:197841-198379 8.39e-01 100 chrXVI:581374-582285 4.98e-01 100 chrII:613158-613949 1.50e-01 100 chrIV:884869-886331 3.16e-01 100 chrXV:487259-487698 2.71e-10 9_[+2(6.62e-10)]_19_[+1(7.84e-08)]_\ 25 chrIV:975861-977305 7.40e-01 100 chrXIII:551467-551714 8.66e-01 100 chrVII:23865-26087 6.41e-01 100 chrXII:687658-688446 5.77e-01 100 chrVIII:126466-127762 1.06e-03 21_[-3(1.55e-07)]_58 chrX:516808-516908 8.30e-01 100 chrVII:255162-255684 5.61e-01 100 chrVIII:237753-238282 5.10e-01 100 chrXII:819283-820335 6.41e-01 100 chrXIII:168616-169028 1.79e-03 21_[+2(2.70e-07)]_52 chrXIII:887008-889334 3.89e-01 100 chrXIV:560168-561110 1.01e-01 100 chrVII:343466-346755 8.23e-02 58_[+3(9.14e-05)]_21 chrXVI:768522-769915 2.99e-05 47_[-1(4.06e-09)]_33 chrXII:1064675-1065270 1.99e-01 100 chrIV:1488776-1490818 7.99e-01 100 chrXV:438476-438983 1.47e-05 30_[+1(4.06e-09)]_50 chrXIII:146490-147225 8.03e-01 100 chrVII:857217-857641 2.33e-01 100 chrXI:518760-519648 4.85e-03 31_[+3(1.14e-06)]_13_[-3(2.64e-06)]_\ 14 chrX:355106-355206 1.13e-09 12_[+2(1.22e-07)]_17_[+1(2.74e-09)]_\ 24 chrVII:549-1184 1.64e-01 100 chrXVI:209949-210513 2.85e-06 19_[-1(1.58e-09)]_61 chrVI:180641-181251 6.31e-01 100 chrXI:302682-303216 5.64e-02 100 chrXII:805835-807170 9.81e-02 100 chrXI:591034-592426 5.28e-02 76_[-3(8.06e-05)]_3 chrXI:24475-26469 2.32e-01 100 chrV:303886-305615 4.02e-01 100 chrIV:1150107-1150407 1.00e+00 100 chrVII:205352-206309 5.21e-01 100 chrXIII:259017-259463 5.00e-08 23_[-2(3.42e-11)]_50 chrXIII:798378-799461 3.25e-01 100 chrIII:78363-78856 1.21e-01 100 chrXII:498568-500226 4.96e-01 100 chrVII:930153-930345 4.18e-01 100 chrXI:140661-142208 2.11e-01 100 chrIII:141805-143367 2.56e-03 28_[+3(5.72e-07)]_51 chrXII:975791-976270 3.75e-10 11_[-1(7.84e-08)]_19_[-2(6.62e-10)]_\ 23 chrIII:168876-169306 5.93e-01 100 chrV:353392-354012 4.51e-03 6_[+3(3.21e-06)]_73 chrXII:365717-366814 8.16e-01 100 chrIV:1203279-1203888 9.80e-01 100 chrXII:86617-87378 4.59e-01 100 chrVII:206705-206995 3.02e-01 100 chrXVI:435669-436189 1.45e-08 22_[-1(9.32e-08)]_17_[-2(4.28e-07)]_\ 14 chrVI:166832-167700 1.88e-02 72_[-3(7.56e-05)]_7 chrII:796789-797955 3.27e-01 100 chrI:245-1116 8.11e-01 100 chrXII:281581-284038 4.16e-01 100 chrII:201977-202285 6.14e-01 100 chrXII:921874-922525 3.11e-01 100 chrXV:854042-854836 1.66e-01 100 chrVIII:62500-63069 4.91e-07 19_[+2(2.35e-07)]_17_[+1(3.97e-07)]_\ 17 chrVII:95035-95374 4.85e-01 100 chrXI:46468-47312 9.31e-01 100 chrXV:976169-978391 2.12e-01 100 chrVII:806179-807782 7.86e-01 100 chrXV:80400-83459 4.92e-01 100 chrVII:736227-736794 7.75e-01 100 chrXVI:193008-194682 3.60e-01 100 chrXII:546138-547472 1.23e-01 74_[-1(7.78e-05)]_6 chrXVI:810447-810852 2.00e-01 100 chrVIII:381221-382795 3.45e-01 100 chrVI:106175-106459 4.91e-04 2_[-3(1.16e-07)]_77 chrXII:11095-11979 1.29e-01 100 chrXVI:622426-623136 3.94e-02 41_[-3(2.14e-05)]_38 chrXII:1051932-1053134 8.96e-01 100 chrII:301037-301610 2.89e-02 1_[-3(4.44e-05)]_78 chrIII:52-1242 1.38e-01 100 chrVIII:74788-75903 2.99e-01 100 chrXVI:928243-928860 5.72e-01 100 chrXIII:5408-5705 8.70e-01 100 chrXIV:738147-739993 3.85e-01 100 chrXIII:90909-91531 4.38e-01 100 chrIX:300108-300493 1.74e-07 24_[-2(2.44e-11)]_49 chrVI:131199-131981 3.67e-01 100 chrI:141339-143739 5.46e-03 7_[-3(5.65e-06)]_72 chrV:141094-141423 1.30e-01 100 chrII:544577-544830 4.63e-01 100 chrXV:424399-426046 9.62e-01 100 chrXII:962812-963328 1.03e-02 9_[-2(7.28e-05)]_64 chrIX:248676-249369 9.08e-01 100 chrXV:340039-340588 1.08e-04 44_[-1(7.84e-08)]_36 chrVII:774146-774814 3.27e-01 100 chrXIII:463288-464697 6.66e-02 100 chrVIII:145521-146417 1.08e-03 42_[-2(1.27e-05)]_31 chrXVI:880105-880815 1.63e-01 100 chrV:435674-436009 7.84e-08 7_[-2(2.44e-11)]_66 chrVII:541590-542175 1.84e-06 60_[+1(1.58e-09)]_20 chrXV:912046-913101 3.42e-01 100 chrXIII:586412-586951 1.15e-10 13_[-1(1.33e-08)]_19_[-2(8.57e-10)]_\ 21 chrXV:779836-780963 1.64e-01 100 chrX:523931-524031 6.74e-01 100 chrVII:700302-701260 3.34e-02 100 chrX:415637-415737 2.76e-07 11_[+3(1.02e-06)]_11_[-1(6.57e-08)]_\ 37 chrXII:628172-629254 4.90e-01 100 chrXII:198333-199814 4.17e-01 100 chrXVI:770123-771082 9.87e-02 100 chrXIII:483859-484130 8.16e-01 100 chrXIV:302620-303873 5.11e-01 100 chrIV:1354452-1355580 8.02e-04 31_[-3(3.06e-07)]_48 chrVII:555050-558303 2.59e-01 100 chrXI:514094-514386 7.72e-01 100 chrXI:333810-334947 4.13e-01 100 chrIV:308328-310180 3.23e-02 100 chrXI:533214-534530 5.19e-01 100 chrXV:594262-594764 8.63e-01 100 chrX:422735-422835 4.00e-09 10_[+2(5.60e-09)]_18_[+1(1.01e-07)]_\ 25 chrXIII:480373-480922 1.57e-13 32_[-1(3.98e-10)]_18_[-2(2.44e-11)]_\ 3 chrVII:533688-535146 5.97e-01 100 chrX:541356-541456 2.08e-01 100 chrIV:229795-230711 1.07e-01 100 chrVIII:34404-36105 2.00e-01 100 chrXIII:767947-768599 6.26e-01 100 chrVII:939014-939662 5.71e-01 100 chrXIII:362826-363253 7.22e-04 73_[+2(2.35e-07)] chrIV:892204-892987 7.11e-04 36_[+3(3.95e-07)]_43 chrVIII:236536-236858 4.11e-01 100 chrV:354699-355361 2.12e-01 100 chrVII:648182-648474 2.55e-01 100 chrX:139082-139182 6.75e-01 100 chrXVI:374927-375529 2.69e-01 100 chrIV:220982-221912 2.44e-01 100 chrVIII:84756-85562 2.72e-02 28_[+3(2.31e-05)]_51 chrXIII:222588-223919 2.47e-01 100 chrVI:204859-205194 2.04e-01 100 chrVII:328404-329179 7.13e-02 100 chrXIII:9677-10535 2.36e-02 12_[+3(1.45e-05)]_67 chrXII:367862-371672 7.05e-01 100 chrXII:1038620-1039905 1.20e-01 100 chrVIII:132541-133373 5.65e-01 100 chrX:531616-531716 7.89e-04 10_[-3(1.55e-07)]_69 chrXIV:778681-779237 9.30e-01 100 chrX:227746-227846 2.78e-01 100 chrIV:550348-550786 4.73e-03 68_[+3(6.44e-07)]_11 chrXI:431890-432477 3.27e-02 26_[+3(4.75e-05)]_53 chrXIII:912147-913061 8.01e-01 100 chrII:478964-479562 8.44e-04 62_[+3(1.79e-07)]_17 chrXIV:499422-502132 2.12e-01 100 chrX:424419-424519 9.88e-01 100 chrII:254319-257695 2.06e-01 100 chrX:396001-396101 1.64e-01 100 chrVI:210442-210809 1.83e-06 7_[+3(4.28e-06)]_24_[-1(4.25e-07)]_\ 28 chrIV:1021261-1022427 1.75e-02 3_[-3(5.15e-06)]_76 chrXVI:821622-822818 4.71e-01 100 chrVI:63909-65219 4.02e-01 100 chrIV:1162879-1164780 9.64e-01 100 chrI:182365-182732 8.14e-07 8_[+3(1.45e-05)]_3_[-1(1.30e-07)]_\ 48 chrXV:571680-572236 4.96e-02 100 chrIV:1492126-1493142 2.86e-01 100 chrV:77601-80040 1.14e-01 100 chrX:414738-414838 1.57e-13 27_[+2(2.44e-11)]_18_[+1(3.98e-10)]_\ 8 chrXII:644717-645714 4.03e-06 70_[+3(3.01e-10)]_9 chrIV:579340-580785 1.62e-01 100 chrVII:912759-913794 8.63e-01 100 chrII:680354-682075 5.78e-02 100 chrIV:667628-668207 3.74e-01 100 chrII:350640-351110 5.68e-11 [+2(4.56e-07)]_17_[+1(4.06e-09)]_8_\ [-3(1.70e-05)]_7 chrI:71809-73665 9.00e-01 100 chrXIV:720631-721794 4.77e-01 100 chrIII:82132-82808 1.64e-07 29_[+3(9.14e-05)]_[-1(1.58e-09)]_30 chrVIII:214128-214368 4.87e-05 56_[-3(2.22e-08)]_23 chrV:288236-288736 1.43e-10 15_[-1(5.53e-07)]_27_[-2(2.44e-11)]_\ 11 chrXIV:727724-728914 8.14e-01 100 chrXIII:747711-748148 1.37e-09 21_[-1(2.74e-09)]_17_[-2(1.22e-07)]_\ 15 chrXIII:131567-132060 1.13e-07 43_[+3(9.56e-06)]_6_[-1(2.74e-09)]_\ 10 chrXIV:442839-444337 6.20e-01 100 chrVII:598503-598844 9.56e-01 100 chrV:306295-306923 1.16e-03 68_[-2(3.59e-06)]_5 chrIV:410168-410773 7.41e-06 2_[+1(1.02e-09)]_78 chrII:197240-197832 1.27e-13 6_[+2(1.20e-11)]_19_[+1(6.43e-10)]_\ 28 chrVII:535445-535814 1.00e-03 77_[-3(1.79e-07)]_2 chrXIV:502321-502880 2.54e-01 100 chrXVI:514477-517220 4.66e-01 100 chrXII:948886-953476 7.05e-01 100 chrXVI:376949-377400 2.49e-02 40_[-3(6.76e-06)]_39 chrV:27959-28769 4.81e-01 100 chrXV:216330-216543 8.24e-01 100 chrIV:252647-254046 7.11e-01 100 chrV:166902-167621 6.95e-02 100 chrXVI:282131-283253 1.52e-03 [-3(5.06e-07)]_79 chrV:438508-439112 7.31e-01 100 chrXV:159285-160742 1.74e-02 58_[-1(7.52e-05)]_22 chrXIII:498850-500729 1.45e-01 100 chrV:268899-270208 4.50e-01 100 chrII:168402-170428 1.70e-01 41_[-3(7.56e-05)]_38 chrXV:978572-980267 8.00e-02 18_[+3(8.06e-05)]_61 chrX:374203-374303 2.83e-09 14_[-1(2.74e-09)]_17_[-2(1.22e-07)]_\ 22 chrXIII:660952-662039 6.29e-02 100 chrIV:472762-473459 1.96e-01 42_[+3(9.73e-05)]_37 chrXII:793734-796345 7.53e-01 100 chrVII:319624-320135 8.88e-02 100 chrIX:197346-198145 7.28e-01 100 chrVII:544203-546132 3.93e-01 100 chrXV:841350-843196 7.32e-01 100 chrIX:255024-257041 2.23e-01 100 chrXV:709998-710696 6.69e-01 100 chrXII:214610-215156 1.99e-08 20_[+3(1.33e-05)]_17_[-1(2.36e-10)]_\ 22 chrII:266198-266647 2.74e-11 4_[+2(1.05e-10)]_18_[+1(2.79e-08)]_\ 31 chrXIII:219567-220908 8.29e-01 100 chrVII:479005-482946 1.67e-01 100 chrIX:183313-183670 2.67e-13 7_[-1(6.43e-10)]_19_[-2(2.89e-11)]_\ 27 chrII:706754-707706 5.37e-01 100 chrIV:1305373-1306085 5.03e-07 4_[+1(1.30e-07)]_55_[-3(8.13e-07)] chrXI:578544-579346 1.50e-05 68_[+2(4.04e-09)]_5 chrX:517786-517886 4.77e-01 100 chrVII:277555-278711 3.65e-01 100 chrXV:353886-354806 8.30e-01 100 chrII:370000-370880 6.95e-01 100 chrXVI:743890-744652 7.01e-04 61_[+2(7.05e-08)]_12 chrVIII:204074-205075 9.65e-01 100 chrIV:1016985-1017657 7.44e-01 100 chrX:622503-622603 7.94e-01 100 chrII:87917-88604 1.65e-01 100 chrXI:574607-576470 3.58e-04 71_[-3(3.54e-06)]_8 chrXII:566218-566708 4.13e-01 100 chrIX:438729-439312 2.81e-01 100 chrV:491276-492533 2.98e-01 100 chrVIII:475284-475888 3.89e-03 13_[+3(4.48e-07)]_66 chrXVI:701861-702456 2.21e-01 100 chrII:591585-591794 3.75e-02 30_[+3(3.34e-05)]_49 chrV:99897-100344 1.86e-01 100 chrIV:945805-945986 7.44e-01 100 chrXV:384508-385027 2.44e-01 100 chrV:208078-208373 2.02e-01 100 chrIII:176726-178248 7.08e-02 100 chrXV:1003947-1004920 1.81e-03 17_[-3(2.68e-07)]_62 chrXIII:91806-92079 8.94e-01 100 chrVII:794045-794548 6.43e-01 100 chrV:441652-442682 9.54e-01 100 chrXIII:504547-505351 2.33e-01 100 chrXIV:461293-462623 1.44e-01 100 chrXVI:645293-646233 9.92e-01 100 chrVII:197754-197983 2.71e-01 100 chrXII:837607-839406 6.34e-01 100 chrXIII:290466-291608 8.57e-01 100 chrVII:364913-366770 5.11e-01 100 chrV:311711-312287 3.79e-01 100 chrIV:1233311-1234339 7.49e-01 100 chrIV:118416-118881 6.98e-01 100 chrXIII:837717-838104 9.41e-04 66_[+2(2.70e-07)]_7 chrXIII:305728-307065 9.40e-02 100 chrXI:558452-559689 8.49e-01 100 chrXIV:173980-174610 7.76e-01 100 chrXIV:722005-723168 2.96e-01 100 chrXII:636746-640298 9.09e-02 100 chrVIII:168360-168758 5.78e-02 67_[-3(1.57e-05)]_12 chrII:611722-612929 6.05e-01 100 chrVII:730974-731398 4.47e-05 45_[+1(7.84e-08)]_35 chrX:207850-207950 1.86e-01 100 chrXI:285698-285938 5.92e-01 100 chrIV:427660-428736 4.69e-01 100 chrIX:324161-324806 7.89e-02 100 chrIV:359370-359780 5.42e-05 50_[+2(4.04e-09)]_23 chrV:130802-131442 2.85e-09 18_[-1(4.06e-09)]_17_[-2(9.70e-08)]_\ 18 chrXI:158218-159762 7.91e-02 100 chrVII:398482-400174 2.09e-01 100 chrIX:325546-326103 9.73e-05 17_[+1(2.79e-08)]_63 chrXII:1028868-1030460 1.97e-01 100 chrXII:796547-796787 3.42e-01 100 chrII:341001-341904 5.28e-02 62_[+3(4.14e-05)]_17 chrXV:407614-408221 6.18e-01 100 chrV:284589-285010 8.62e-01 100 chrIV:519556-521380 7.69e-01 100 chrIV:1359148-1359667 9.95e-01 100 chrXIII:37247-38780 2.87e-01 100 chrX:216180-216280 9.94e-01 100 chrXII:734406-734979 3.57e-01 100 chrXI:217877-218846 5.81e-03 23_[-1(1.97e-05)]_57 chrVII:483253-483816 4.68e-03 1_[+1(1.66e-06)]_79 chrXI:112753-114661 2.35e-02 22_[-3(2.89e-05)]_57 chrXIII:372196-372756 1.01e-10 27_[-1(1.33e-08)]_19_[-2(8.57e-10)]_\ 7 chrII:36141-36547 7.62e-01 100 chrIV:132120-133669 1.04e-01 100 chrVII:845165-846074 4.90e-01 100 chrXVI:168696-170362 4.20e-05 67_[-3(3.20e-08)]_12 chrVII:110424-110930 4.70e-07 6_[-1(3.97e-07)]_17_[-2(2.35e-07)]_\ 30 chrIV:415139-417704 4.19e-01 100 chrXIII:767337-767594 2.24e-02 49_[-3(1.04e-05)]_30 chrVI:137256-137918 8.70e-01 100 chrX:703347-703447 7.41e-01 100 chrIV:1434535-1435068 5.61e-01 100 chrXIV:300746-302314 1.44e-01 100 chrXIII:225910-226695 8.27e-02 100 chrV:302724-303619 3.02e-01 100 chrXII:87618-87917 3.27e-01 100 chrXIII:851878-852204 3.58e-01 100 chrXVI:214616-216188 9.05e-01 100 chrVII:779194-779913 1.41e-01 100 chrVII:905190-905396 4.62e-02 61_[-2(4.88e-05)]_12 chrXV:908062-908299 9.55e-01 100 chrXV:113186-113968 9.61e-01 100 chrVII:823263-823701 9.59e-06 48_[+2(8.57e-10)]_25 chrXIV:715529-716662 1.58e-01 100 chrVII:706332-707305 8.46e-01 100 chrII:392886-395395 4.23e-01 100 chrX:608440-608540 5.63e-01 100 chrII:555830-558524 2.99e-01 100 chrVIII:123569-124003 8.36e-02 100 chrXIII:625856-626894 5.16e-02 75_[+3(8.06e-05)]_4 chrXV:832265-832854 5.05e-02 44_[-3(2.14e-05)]_35 chrXII:426923-427501 2.72e-04 12_[+1(5.48e-08)]_68 chrXIV:585438-586840 4.79e-01 100 chrIV:1269896-1270964 1.41e-01 100 chrII:9353-10042 4.92e-01 100 chrXIII:607891-608806 8.43e-01 100 chrVII:609300-610079 3.83e-03 78_[+3(1.02e-06)]_1 chrIV:551344-551705 2.98e-01 100 chrVII:207305-207479 1.07e-01 1_[+1(6.14e-05)]_79 chrXVI:678905-680095 3.03e-02 3_[-3(8.78e-06)]_76 chrVI:164246-165160 2.21e-01 100 chrXII:459643-460703 4.39e-01 100 chrXIV:415139-416188 1.10e-03 38_[-3(2.05e-07)]_41 chrVIII:555881-557110 1.91e-01 100 chrX:236343-236443 9.11e-01 100 chrX:121223-121323 3.43e-01 100 chrX:348620-348720 1.47e-01 100 chrXV:641773-642329 2.83e-01 100 chrXIII:23557-26042 7.70e-01 100 chrXV:300861-301423 3.00e-09 3_[+2(1.22e-07)]_47_[+1(6.68e-09)]_\ 3 chrXI:162066-162772 5.40e-01 100 chrXVI:730743-731321 7.08e-01 100 chrXV:110863-111344 7.43e-02 100 chrXII:1001736-1002036 6.41e-01 100 chrIX:210532-211242 7.10e-03 52_[+3(1.95e-06)]_27 chrXV:281846-282574 1.18e-11 2_[+2(5.98e-08)]_16_[+1(3.35e-10)]_\ 35 chrIV:802596-802973 3.17e-10 5_[-1(4.06e-09)]_17_[-2(1.13e-07)]_\ 31 chrXII:669165-669694 7.88e-01 100 chrIII:123215-123764 2.72e-01 100 chrIV:601389-602343 8.04e-04 47_[-3(3.95e-07)]_32 chrXVI:191702-192794 1.78e-01 100 chrVIII:388676-389185 7.06e-05 21_[-1(6.68e-09)]_59 chrXV:1027735-1029069 2.07e-01 100 chrVII:286466-287896 4.26e-03 74_[-1(1.44e-05)]_6 chrXI:258613-260505 7.37e-01 100 chrIII:178441-178794 9.32e-01 100 chrX:353945-354045 8.62e-01 100 chrVII:115203-116145 2.23e-01 100 chrIV:913961-916212 5.10e-01 100 chrVII:400853-401739 1.13e-02 41_[-3(7.38e-06)]_38 chrXV:43228-43843 6.02e-02 100 chrXI:458370-458981 8.98e-02 100 chrXII:83953-84685 7.53e-03 59_[+3(4.70e-06)]_20 chrXIII:161974-164316 5.91e-01 100 chrVII:702835-703965 6.21e-02 [+3(4.14e-05)]_79 chrV:406553-409478 6.92e-01 100 chrVII:185490-185915 4.59e-06 70_[-1(3.98e-10)]_10 chrIV:1201574-1202619 2.75e-01 100 chrXIII:296221-298897 9.53e-01 100 chrXV:1002709-1003672 5.61e-01 100 chrXII:656691-658070 1.33e-01 100 chrV:430974-431530 3.65e-02 41_[-1(1.78e-05)]_39 chrX:538381-538481 2.46e-01 100 chrIV:1243133-1243328 6.36e-01 100 chrVII:959305-959671 8.60e-01 100 chrXI:379203-380122 9.73e-07 18_[-2(4.26e-05)]_21_[+2(4.44e-10)]_\ 7 chrI:166056-166567 4.21e-14 4_[+2(1.44e-11)]_18_[+1(2.36e-10)]_\ 31 chrXII:201651-202712 2.93e-01 100 chrXI:83642-84421 1.78e-01 100 chrII:642853-643417 8.58e-01 100 chrIV:1402132-1403512 5.61e-02 38_[-3(2.31e-05)]_41 chrX:663388-663488 9.28e-02 100 chrIX:336131-336681 1.77e-05 1_[-1(5.48e-08)]_79 chrXIV:197972-198478 1.22e-03 61_[-3(4.48e-07)]_18 chrVII:531270-531747 6.98e-01 100 chrXV:663466-664093 5.56e-01 100 chrVII:411886-412589 5.52e-01 100 chrXIV:104620-105130 2.18e-05 23_[+1(2.79e-08)]_57 chrXV:92139-94731 4.42e-01 100 chrX:520514-520614 3.76e-01 100 chrIV:83334-83786 5.46e-11 36_[+2(2.49e-08)]_16_[+1(3.35e-10)]_\ 1 chrXIV:602093-602526 3.75e-08 51_[+2(2.89e-11)]_22 chrV:550801-551579 9.22e-02 100 chrX:705144-705244 8.49e-01 100 chrV:85119-85433 4.25e-01 100 chrIV:1236470-1238873 9.84e-01 100 chrVIII:122280-122640 2.00e-01 100 chrXII:92238-92896 1.11e-04 29_[+2(5.50e-08)]_44 chrXIV:96024-96653 1.96e-01 100 chrXII:522617-523652 4.39e-02 100 chrV:469290-470079 2.83e-01 100 chrXII:605150-605607 1.68e-01 100 chrV:449569-450393 2.95e-01 100 chrXV:761561-762864 8.42e-02 100 chrV:135081-135678 7.92e-02 100 chrI:229449-229672 9.62e-01 100 chrVI:157682-158284 4.41e-04 48_[-2(4.64e-08)]_25 chrVII:930592-931218 2.10e-06 76_[+3(2.35e-09)]_3 chrIX:142047-143283 1.95e-01 100 chrV:151260-153037 2.72e-03 16_[+3(2.16e-06)]_63 chrII:326579-327058 2.42e-09 32_[-1(2.74e-09)]_19_[-2(5.16e-07)]_\ 2 chrXII:710285-710995 3.01e-01 100 chrXIII:267241-268834 9.81e-03 68_[-3(6.76e-06)]_11 chrXI:217219-217649 7.75e-01 100 chrXIII:880016-880912 7.88e-01 100 chrIV:568585-569335 6.23e-07 14_[+1(2.74e-09)]_66 chrXVI:280479-281670 8.38e-01 100 chrVII:147202-148976 3.70e-03 2_[+3(1.75e-06)]_77 chrIV:158982-159662 2.58e-03 19_[-3(4.70e-06)]_60 chrXIII:183759-184173 2.76e-04 26_[-2(5.98e-08)]_47 chrV:61026-62153 5.87e-01 100 chrVIII:133721-134748 9.94e-01 100 chrXVI:860064-860696 1.02e-04 47_[+2(2.49e-08)]_26 chrXIII:807689-808542 4.14e-02 78_[-3(1.70e-05)]_1 chrVII:877837-879105 3.32e-01 100 chrXV:228010-228623 1.05e-05 63_[+2(6.62e-10)]_10 chrVII:316775-317486 8.65e-01 100 chrIV:434042-434532 7.53e-12 35_[-1(2.79e-08)]_18_[-2(4.77e-11)] chrXII:263146-263980 3.84e-01 100 chrXI:219565-220086 7.37e-01 100 chrXIII:551978-553327 8.47e-01 100 chrX:390787-390887 6.97e-10 34_[-1(1.01e-07)]_18_[-2(5.60e-09)]_\ 1 chrXII:231387-234244 3.60e-01 100 chrXIV:783890-784094 1.88e-01 100 chrXV:330533-331130 8.46e-01 100 chrX:90719-90819 1.80e-01 100 chrII:431428-432212 2.86e-02 54_[-3(2.14e-05)]_25 chrXII:647873-651238 2.21e-01 100 chrXV:382468-383772 7.42e-03 48_[+3(1.75e-06)]_31 chrXV:777882-779439 8.86e-01 100 chrX:204325-204425 1.70e-01 100 chrX:58975-59075 3.08e-01 100 chrXI:519890-521015 4.93e-01 100 chrVII:884453-884754 9.51e-01 100 chrXIV:632442-632907 1.90e-07 19_[+1(7.84e-08)]_5_[-3(1.45e-05)]_\ 35 chrXII:818532-819017 2.76e-01 100 chrVIII:562344-562551 6.35e-01 100 chrXV:899634-901239 7.08e-01 100 chrV:138450-140752 8.75e-03 16_[-1(8.07e-06)]_64 chrIII:127525-127863 1.34e-05 70_[+2(1.25e-09)]_3 chrXII:796965-797446 2.98e-06 65_[+1(1.58e-09)]_15 chrX:119061-119161 1.82e-01 100 chrXIV:619530-620209 7.26e-01 100 chrIX:316188-316472 1.97e-01 63_[-1(9.82e-05)]_17 chrXIII:195948-196407 9.76e-05 17_[-2(5.50e-08)]_56 chrIV:765082-766275 4.70e-01 100 chrX:172736-172836 1.17e-01 100 chrXV:925174-925409 3.11e-01 100 chrIV:1301641-1302609 3.96e-01 100 chrXIV:102491-102973 2.08e-10 32_[+2(6.62e-10)]_19_[+1(7.84e-08)]_\ 2 chrVI:226433-226950 3.15e-07 55_[-1(3.98e-10)]_25 chrV:396746-398190 6.01e-01 100 chrXIII:348050-349822 1.94e-01 100 chrXVI:689380-689842 2.77e-09 2_[+2(6.62e-10)]_27_[+1(5.53e-07)]_\ 24 chrXV:380571-381158 6.09e-02 100 chrXIV:88936-89765 5.82e-06 15_[-3(5.30e-10)]_64 chrXI:282559-285475 8.50e-02 100 chrV:207123-207674 3.58e-08 7_[+2(3.30e-07)]_17_[+1(3.97e-07)]_\ 29 chrVII:422904-423597 5.76e-01 100 chrVI:222935-223901 1.22e-01 100 chrIV:488115-489195 7.50e-01 100 chrVI:191277-191795 3.99e-04 35_[-1(9.59e-07)]_45 chrII:477183-477760 6.97e-05 79_[-3(2.35e-07)] chrVII:876039-876830 8.74e-15 8_[+2(2.44e-11)]_18_[+1(3.98e-10)]_\ 27 chrXIII:251853-253785 4.72e-01 100 chrIV:1352320-1352712 1.59e-13 8_[-1(3.98e-10)]_18_[-2(2.44e-11)]_\ 27 chrXVI:572033-572824 8.21e-02 20_[-3(5.45e-05)]_59 chrIV:884212-884573 7.61e-07 17_[+2(5.80e-10)]_56 chrXV:444634-446392 9.53e-01 100 chrVII:121954-122604 4.17e-07 38_[+2(2.44e-11)]_35 chrXV:464293-464772 1.61e-06 40_[+1(6.68e-09)]_11_[-3(5.09e-05)]_\ 8 chrXVI:404498-405869 9.58e-01 100 chrII:237695-238136 5.13e-02 18_[+3(1.84e-05)]_61 chrX:155871-155971 1.10e-01 19_[-3(4.75e-05)]_60 chrXVI:641906-642577 1.17e-01 100 chrXI:325811-327587 2.09e-01 100 chrIV:1441063-1443376 4.90e-01 100 chrV:100765-101597 1.11e-01 100 chrXII:448521-448947 1.93e-07 11_[-2(1.13e-07)]_38_[-3(9.12e-07)]_\ 3 chrXI:202853-203686 5.24e-01 100 chrXIV:26942-27762 9.28e-01 100 chrXII:97151-97925 6.25e-01 100 chrXI:355663-356971 8.04e-01 100 chrIII:107091-107788 1.36e-02 63_[+3(3.89e-06)]_16 chrXV:342793-343381 1.03e-03 12_[+3(1.00e-07)]_67 chrVII:958676-959101 7.82e-01 100 chrIV:222097-222274 3.95e-01 100 chrVII:828459-828975 1.51e-05 64_[-1(2.74e-09)]_16 chrXV:109665-110679 3.22e-01 100 chrVIII:455403-456341 4.58e-01 100 chrVII:783616-785749 7.83e-02 100 chrXVI:98454-99063 1.56e-02 23_[-1(2.69e-05)]_57 chrIV:1075286-1075764 6.54e-08 5_[-1(5.49e-10)]_18_[-2(2.84e-05)]_\ 30 chrIV:619722-620519 8.04e-01 100 chrXVI:775656-776196 9.88e-01 100 chrXIII:651100-652947 5.20e-01 100 chrVII:738914-739569 9.02e-01 100 chrIV:992597-993336 9.61e-01 100 chrXI:74402-75084 2.30e-02 100 chrXV:288012-288396 2.78e-03 36_[+2(3.76e-07)]_37 chrXII:875267-875656 4.76e-09 31_[+1(4.06e-09)]_8_[-3(2.35e-07)]_\ 20 chrVII:440161-442402 3.31e-01 100 chrX:651906-652006 1.75e-01 100 chrVII:254162-254754 5.86e-01 100 chrIV:1502054-1503209 5.14e-01 100 chrV:422791-425306 3.88e-01 100 chrXII:39136-40403 9.31e-01 100 chrXIV:575052-577369 8.21e-01 100 chrII:444602-445370 9.80e-01 100 chrVIII:374605-376231 3.75e-04 36_[+3(2.05e-07)]_43 chrXII:374217-374683 8.43e-01 100 chrVIII:461707-462901 5.14e-01 100 chrVI:162017-162375 9.48e-01 100 chrIV:1175579-1176051 1.60e-05 62_[+2(3.23e-09)]_11 chrX:197052-197152 2.84e-14 33_[-1(1.02e-09)]_18_[-2(2.54e-12)]_\ 2 chrIV:1182409-1183669 4.49e-01 100 chrV:364194-364510 1.02e-02 68_[+3(2.16e-06)]_11 chrXIII:145795-146175 1.26e-03 72_[-3(1.95e-06)]_7 chrIV:726978-727976 4.65e-01 100 chrII:604255-605990 2.97e-01 100 chrIV:1202864-1203056 6.28e-01 100 chrXII:592348-593164 7.19e-01 100 chrIII:227658-228218 3.55e-08 52_[+2(5.60e-11)]_21 chrXVI:172986-174111 2.50e-01 100 chrV:305854-306073 2.20e-01 100 chrXII:88179-88826 1.52e-01 100 chrIV:464871-465841 9.03e-01 100 chrII:226882-227360 2.10e-11 2_[+2(1.44e-11)]_27_[+1(1.30e-07)]_\ 24 chrVII:825390-826742 4.50e-02 100 chrII:682343-682523 9.17e-01 100 chrXI:517750-518301 9.07e-14 11_[+2(6.84e-12)]_18_[+1(1.02e-09)]_\ 24 chrIII:294937-295974 1.16e-01 100 chrII:606297-607124 1.11e-01 100 chrIV:1012173-1013646 4.79e-01 100 chrX:542763-542863 1.13e-03 46_[-2(2.70e-07)]_27 chrXV:828831-830109 2.04e-01 100 chrXII:932184-932483 5.38e-03 30_[+3(3.21e-06)]_49 chrXIII:347214-347807 5.44e-01 100 chrV:434398-434749 4.67e-07 26_[-1(3.97e-07)]_17_[-2(3.30e-07)]_\ 10 chrX:233630-233730 5.76e-01 100 chrXVI:842576-843275 4.18e-02 100 chrXIII:631299-634863 2.97e-04 11_[+3(1.13e-05)]_21_[+3(2.68e-07)]_\ 26 chrIV:322181-323623 5.42e-03 27_[+3(5.15e-06)]_52 chrVII:875460-875823 6.75e-01 100 chrIII:168024-168640 1.97e-09 27_[-1(4.06e-09)]_17_[-2(7.64e-08)]_\ 9 chrXII:167794-168250 5.78e-07 27_[-2(3.42e-11)]_46 chrII:347428-347896 3.61e-04 45_[+1(1.20e-07)]_35 chrIV:541207-542468 6.64e-01 100 chrXII:731941-732323 2.89e-07 6_[+2(1.41e-09)]_46_[+1(4.67e-05)]_\ 1 chrXIV:567884-568661 1.19e-01 100 chrX:115468-115568 8.89e-02 100 chrVII:561116-561903 4.68e-03 12_[+3(8.06e-06)]_67 chrXV:96153-97351 6.36e-01 100 chrXIII:219141-219365 8.80e-01 100 chrXIV:374688-375092 3.40e-05 27_[+2(1.88e-08)]_46 chrIV:1240661-1241006 9.84e-01 100 chrIV:1204280-1206748 8.78e-01 100 chrXIII:434035-434265 6.32e-01 100 chrI:138684-139348 9.74e-01 100 chrXVI:586542-587103 9.90e-01 100 chrVII:574630-575837 3.09e-07 6_[-1(5.18e-05)]_44_[-3(6.52e-09)]_\ 9 chrXVI:559684-560492 6.46e-01 100 chrX:617664-617764 2.86e-01 100 chrXI:513258-513640 6.92e-02 100 chrXV:877484-878096 4.34e-01 100 chrXIII:353423-353664 5.62e-02 4_[-3(1.84e-05)]_75 chrVII:914620-915269 2.28e-02 32_[+3(4.28e-06)]_47 chrVII:771868-772934 6.46e-01 100 chrIV:453520-454360 6.56e-03 67_[-3(1.75e-06)]_12 chrX:521570-521670 1.16e-01 100 chrXI:313172-313669 4.61e-06 12_[+3(3.89e-06)]_6_[-1(3.97e-07)]_\ 41 chrXIII:288014-290178 7.11e-01 100 chrXVI:338734-339334 9.63e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************