******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--SWI1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:374609-377231 1.0000 100 chrVIII:292513-294113 1.0000 100 chrXV:2-1022 1.0000 100 chrVII:276874-278716 1.0000 100 chrXI:355293-356470 1.0000 100 chrI:165999-166606 1.0000 100 chrIV:1468034-1469163 1.0000 100 chrXVI:812498-813352 1.0000 100 chrXIII:651669-652988 1.0000 100 chrVII:544144-546108 1.0000 100 chrVII:426842-427286 1.0000 100 chrXI:517735-518316 1.0000 100 chrIV:667724-668253 1.0000 100 chrIII:142186-142997 1.0000 100 chrXVI:425124-425685 1.0000 100 chrIV:1164587-1165790 1.0000 100 chrXII:48551-49127 1.0000 100 chrV:6144-6613 1.0000 100 chrXIV:499260-501488 1.0000 100 chrIV:1013090-1013976 1.0000 100 chrXII:498389-499675 1.0000 100 chrM:58265-58711 1.0000 100 chrII:326549-327167 1.0000 100 chrXI:617684-619425 1.0000 100 chrXVI:209924-210624 1.0000 100 chrVII:440368-441391 1.0000 100 chrXV:832270-832856 1.0000 100 chrXII:214658-215166 1.0000 100 chrVII:878086-879370 1.0000 100 chrXV:908456-909139 1.0000 100 chrXIII:168561-169074 1.0000 100 chrV:250106-250570 1.0000 100 chrXVI:581837-582395 1.0000 100 chrII:544504-544900 1.0000 100 chrIV:835727-836378 1.0000 100 chrXV:769924-770478 1.0000 100 chrIV:980665-981279 1.0000 100 chrXIII:761859-762575 1.0000 100 chrVII:166109-166540 1.0000 100 chrXII:805396-807214 1.0000 100 chrVIII:353253-353650 1.0000 100 chrX:651178-651278 1.0000 100 chrVII:400470-400707 1.0000 100 chrVIII:466730-467307 1.0000 100 chrXII:924405-925196 1.0000 100 chrXIII:290585-291180 1.0000 100 chrXIV:102488-102983 1.0000 100 chrXIV:602093-602595 1.0000 100 chrII:311538-311750 1.0000 100 chrXVI:770511-771878 1.0000 100 chrXIII:123902-124923 1.0000 100 chrIX:183068-183725 1.0000 100 chrXV:663516-664115 1.0000 100 chrXIII:279719-280279 1.0000 100 chrVII:939034-939679 1.0000 100 chrXII:86795-87276 1.0000 100 chrX:444893-444993 1.0000 100 chrVII:115017-115760 1.0000 100 chrXVI:302467-304292 1.0000 100 chrVI:263706-264440 1.0000 100 chrXI:513200-513713 1.0000 100 chrXII:903416-903665 1.0000 100 chrXII:198585-199683 1.0000 100 chrXI:158189-159635 1.0000 100 chrV:354668-355387 1.0000 100 chrIV:1080188-1081011 1.0000 100 chrVII:328368-329252 1.0000 100 chrXIII:372202-372762 1.0000 100 chrXIV:62286-64760 1.0000 100 chrIII:1-1435 1.0000 100 chrXII:645202-646354 1.0000 100 chrVIII:48141-48590 1.0000 100 chrXI:282524-284781 1.0000 100 chrXII:84025-84811 1.0000 100 chrXII:1051875-1052389 1.0000 100 chrXVI:338676-339157 1.0000 100 chrV:408207-409612 1.0000 100 chrXII:522053-523508 1.0000 100 chrIV:1278655-1279157 1.0000 100 chrXII:282473-283831 1.0000 100 chrVII:343893-346582 1.0000 100 chrXVI:515653-517340 1.0000 100 chrVI:222996-224166 1.0000 100 chrXIV:586935-587105 1.0000 100 chrVII:856688-857010 1.0000 100 chrII:181290-181686 1.0000 100 chrII:60202-61271 1.0000 100 chrXII:962652-963965 1.0000 100 chrXV:980461-981495 1.0000 100 chrVIII:122099-122674 1.0000 100 chrII:444647-445212 1.0000 100 chrXI:162271-162770 1.0000 100 chrXVI:66635-67436 1.0000 100 chrIV:341148-341664 1.0000 100 chrXV:216143-216822 1.0000 100 chrVII:779365-779909 1.0000 100 chrXVI:297007-297568 1.0000 100 chrXII:656677-657217 1.0000 100 chrXVI:810401-811079 1.0000 100 chrII:564658-565124 1.0000 100 chrVI:157682-158216 1.0000 100 chrIII:168096-168599 1.0000 100 chrXVI:622287-622907 1.0000 100 chrXIII:91598-92094 1.0000 100 chrXII:448403-448971 1.0000 100 chrII:798557-799469 1.0000 100 chrIV:385902-387601 1.0000 100 chrXVI:859808-860655 1.0000 100 chrXIII:118865-119676 1.0000 100 chrXV:92183-94896 1.0000 100 chrII:372661-374325 1.0000 100 chrIX:248619-249528 1.0000 100 chrIV:538864-539597 1.0000 100 chrIII:123330-123843 1.0000 100 chrV:130791-131392 1.0000 100 chrXVI:880079-880744 1.0000 100 chrXV:618739-624672 1.0000 100 chrXII:1012064-1012431 1.0000 100 chrIX:231259-231625 1.0000 100 chrXV:464229-464680 1.0000 100 chrVII:787470-788759 1.0000 100 chrI:182352-182787 1.0000 100 chrI:68249-68844 1.0000 100 chrIV:619678-620404 1.0000 100 chrV:438375-438980 1.0000 100 chrVII:576439-577506 1.0000 100 chrXVI:39930-41168 1.0000 100 chrII:415477-415950 1.0000 100 chrXV:925212-925459 1.0000 100 chrII:392095-394458 1.0000 100 chrVII:730949-731454 1.0000 100 chrX:523783-523883 1.0000 100 chrXII:709712-711452 1.0000 100 chrXII:369113-371900 1.0000 100 chrXVI:775534-776091 1.0000 100 chrXIII:661110-662303 1.0000 100 chrXIV:417493-418205 1.0000 100 chrIV:1359181-1361138 1.0000 100 chrVII:598716-599573 1.0000 100 chrXII:5-266 1.0000 100 chrXI:490711-491355 1.0000 100 chrV:321554-323113 1.0000 100 chrXII:65362-65721 1.0000 100 chrXV:778631-779478 1.0000 100 chrIV:1233536-1234177 1.0000 100 chrII:167773-169710 1.0000 100 chrI:229111-230194 1.0000 100 chrX:690527-690627 1.0000 100 chrXI:219588-220151 1.0000 100 chrVIII:62536-62997 1.0000 100 chrXIII:914366-915982 1.0000 100 chrVII:1049913-1050623 1.0000 100 chrXIII:510578-511268 1.0000 100 chrIV:568521-569196 1.0000 100 chrVIII:358305-358805 1.0000 100 chrV:311280-312340 1.0000 100 chrVII:661517-662051 1.0000 100 chrX:139100-139200 1.0000 100 chrIV:358064-358467 1.0000 100 chrXII:592319-593250 1.0000 100 chrVIII:103867-104320 1.0000 100 chrXIII:302469-303171 1.0000 100 chrVI:204770-205209 1.0000 100 chrVII:384621-385008 1.0000 100 chrIV:645004-645415 1.0000 100 chrIV:355210-357859 1.0000 100 chrXII:1064018-1065373 1.0000 100 chrVIII:145994-146457 1.0000 100 chrX:617699-617799 1.0000 100 chrII:36152-36918 1.0000 100 chrX:265346-265446 1.0000 100 chrXV:167786-168488 1.0000 100 chrII:9343-9912 1.0000 100 chrXIV:87110-87950 1.0000 100 chrVIII:132813-133363 1.0000 100 chrXIV:546947-547403 1.0000 100 chrX:517590-517690 1.0000 100 chrXIV:442827-444877 1.0000 100 chrX:415704-415804 1.0000 100 chrVI:191311-191831 1.0000 100 chrXII:949451-953220 1.0000 100 chrXVI:821427-822513 1.0000 100 chrV:486814-487628 1.0000 100 chrVIII:146647-146905 1.0000 100 chrI:180949-181517 1.0000 100 chrII:406614-406904 1.0000 100 chrIV:411181-411653 1.0000 100 chrIX:370116-370693 1.0000 100 chrV:61005-62186 1.0000 100 chrXII:704282-704651 1.0000 100 chrXII:605119-605618 1.0000 100 chrVII:919521-920334 1.0000 100 chrXII:855442-857598 1.0000 100 chrXII:92319-92870 1.0000 100 chrXVI:192992-193922 1.0000 100 chrVIII:85007-85581 1.0000 100 chrXIV:783443-784325 1.0000 100 chrIX:336128-336804 1.0000 100 chrVIII:175049-175428 1.0000 100 chrX:414750-414850 1.0000 100 chrXV:55093-55400 1.0000 100 chrXIII:837513-838255 1.0000 100 chrIV:721380-722146 1.0000 100 chrXIV:498932-499100 1.0000 100 chrVII:561405-561970 1.0000 100 chrIII:77890-78890 1.0000 100 chrVI:101144-101607 1.0000 100 chrX:354021-354121 1.0000 100 chrVII:531419-531826 1.0000 100 chrII:140013-141012 1.0000 100 chrIV:307945-310156 1.0000 100 chrXII:940465-941296 1.0000 100 chrXVI:431622-434328 1.0000 100 chrXII:426914-427454 1.0000 100 chrXV:281759-282532 1.0000 100 chrIV:359339-359899 1.0000 100 chrV:435378-436032 1.0000 100 chrXVI:352223-353076 1.0000 100 chrV:363696-364474 1.0000 100 chrV:442985-443523 1.0000 100 chrXIII:650762-651490 1.0000 100 chrXI:114560-115863 1.0000 100 chrXVI:627351-627650 1.0000 100 chrXVI:55573-56549 1.0000 100 chrX:290851-290951 1.0000 100 chrXIII:797910-798671 1.0000 100 chrVI:224814-225601 1.0000 100 chrXII:793708-796111 1.0000 100 chrI:92352-92799 1.0000 100 chrIX:324025-324612 1.0000 100 chrVII:516254-516921 1.0000 100 chrXV:976161-977346 1.0000 100 chrVII:555146-558089 1.0000 100 chrXV:882112-883108 1.0000 100 chrXII:300311-300858 1.0000 100 chrVI:221256-222087 1.0000 100 chrXIII:267442-269152 1.0000 100 chrVII:412100-412596 1.0000 100 chrXIII:463183-463919 1.0000 100 chrXIV:61675-62084 1.0000 100 chrIX:394742-395046 1.0000 100 chrXII:5478-5930 1.0000 100 chrX:424294-424394 1.0000 100 chrVII:122047-122498 1.0000 100 chrXV:438384-438986 1.0000 100 chrVII:254065-254704 1.0000 100 chrXVI:768899-769471 1.0000 100 chrVIII:125867-127812 1.0000 100 chrXV:571530-572189 1.0000 100 chrV:284600-285302 1.0000 100 chrXI:313101-313690 1.0000 100 chrXI:665543-666774 1.0000 100 chrXII:567934-568842 1.0000 100 chrVI:167251-167714 1.0000 100 chrXII:921274-922625 1.0000 100 chrVIII:384338-385536 1.0000 100 chrXVI:701844-702274 1.0000 100 chrXVI:340509-341065 1.0000 100 chrXI:430757-431695 1.0000 100 chrIX:137344-139392 1.0000 100 chrXV:505004-506904 1.0000 100 chrV:117543-118339 1.0000 100 chrVI:95366-95948 1.0000 100 chrXVI:121371-121781 1.0000 100 chrIII:315613-316619 1.0000 100 chrVII:701857-703683 1.0000 100 chrIV:550689-551374 1.0000 100 chrXIII:631736-633995 1.0000 100 chrXIV:494702-495620 1.0000 100 chrXVI:645195-646289 1.0000 100 chrVII:205310-206420 1.0000 100 chrXII:817860-820551 1.0000 100 chrXIII:320943-321343 1.0000 100 chrVIII:375036-375888 1.0000 100 chrXVI:188551-189021 1.0000 100 chrVII:535452-535853 1.0000 100 chrVII:608611-608787 1.0000 100 chrXIII:880074-880913 1.0000 100 chrXIII:351977-352529 1.0000 100 chrXI:551285-552562 1.0000 100 chrXIV:104596-105178 1.0000 100 chrXIV:725816-726415 1.0000 100 chrV:176853-177429 1.0000 100 chrIX:67812-69616 1.0000 100 chrXII:687639-688228 1.0000 100 chrIX:254224-254578 1.0000 100 chrX:58620-58720 1.0000 100 chrXI:230703-231753 1.0000 100 chrIII:11069-11553 1.0000 100 chrIV:579018-580930 1.0000 100 chrVIII:74882-76315 1.0000 100 chrIII:197186-197829 1.0000 100 chrXI:67656-69027 1.0000 100 chrVII:319588-320195 1.0000 100 chrVII:930755-931236 1.0000 100 chrV:469221-469763 1.0000 100 chrXII:780497-781896 1.0000 100 chrXV:759077-759597 1.0000 100 chrVII:364890-366700 1.0000 100 chrV:304645-306930 1.0000 100 chrIV:1095088-1095727 1.0000 100 chrXI:302667-303238 1.0000 100 chrVII:110430-110928 1.0000 100 chrX:68960-69060 1.0000 100 chrIV:1256885-1257316 1.0000 100 chrVI:4476-5430 1.0000 100 chrV:441774-442650 1.0000 100 chrXI:0-1013 1.0000 100 chrXIII:408358-409094 1.0000 100 chrX:531422-531522 1.0000 100 chrVI:137218-137997 1.0000 100 chrVII:882148-884620 1.0000 100 chrII:266137-266652 1.0000 100 chrXIII:195901-196441 1.0000 100 chrV:430949-431593 1.0000 100 chrVI:105984-106938 1.0000 100 chrII:254879-257147 1.0000 100 chrX:542700-542800 1.0000 100 chrIV:1362263-1362823 1.0000 100 chrXIV:241354-241781 1.0000 100 chrXIII:225337-226696 1.0000 100 chrVII:828450-829007 1.0000 100 chrIV:1434382-1434922 1.0000 100 chrXIII:861158-861431 1.0000 100 chrIV:488513-489221 1.0000 100 chrVIII:488193-488622 1.0000 100 chrVII:608970-610464 1.0000 100 chrXV:987168-989796 1.0000 100 chrIV:437522-438058 1.0000 100 chrVI:226412-226946 1.0000 100 chrXIV:619472-620065 1.0000 100 chrXIV:96015-96637 1.0000 100 chrVII:541606-542197 1.0000 100 chrV:152087-153534 1.0000 100 chrIV:893907-894436 1.0000 100 chrIV:433996-434578 1.0000 100 chrIV:1305281-1305951 1.0000 100 chrII:87990-88571 1.0000 100 chrIV:321429-322005 1.0000 100 chrXIV:567851-568502 1.0000 100 chrIX:131778-132290 1.0000 100 chrIV:118412-118859 1.0000 100 chrV:550960-551580 1.0000 100 chrIV:802536-803026 1.0000 100 chrXII:514660-515320 1.0000 100 chrXV:384680-385053 1.0000 100 chrXVI:678839-679739 1.0000 100 chrX:652038-652138 1.0000 100 chrXII:329271-329650 1.0000 100 chrXIV:374630-375264 1.0000 100 chrV:110530-110954 1.0000 100 chrVIII:548601-548859 1.0000 100 chrXII:489292-489576 1.0000 100 chrVIII:555978-557204 1.0000 100 chrVII:766146-766480 1.0000 100 chrV:461529-462483 1.0000 100 chrXV:300837-301430 1.0000 100 chrIV:1524012-1525659 1.0000 100 chrXVI:731650-732343 1.0000 100 chrXV:160992-161937 1.0000 100 chrXII:854901-855170 1.0000 100 chrVIII:451046-452984 1.0000 100 chrV:492172-492581 1.0000 100 chrII:405197-406243 1.0000 100 chrXII:589018-589439 1.0000 100 chrXIII:5323-5766 1.0000 100 chrXVI:794374-796050 1.0000 100 chrXVI:214251-216012 1.0000 100 chrIV:322174-323618 1.0000 100 chrIX:257328-258868 1.0000 100 chrII:408471-409486 1.0000 100 chrXI:24642-26505 1.0000 100 chrXI:74444-74999 1.0000 100 chrIV:410188-410719 1.0000 100 chrIV:946119-946630 1.0000 100 chrXIV:715445-716651 1.0000 100 chrXI:202828-203322 1.0000 100 chrI:81852-82308 1.0000 100 chrIX:2-226 1.0000 100 chrVII:10-1361 1.0000 100 chrXIII:20-196 1.0000 100 chrXI:340548-341560 1.0000 100 chrXIV:632392-632881 1.0000 100 chrIV:83302-83835 1.0000 100 chrIII:227643-228277 1.0000 100 chrXIII:253044-253604 1.0000 100 chrVII:371138-371555 1.0000 100 chrIV:525090-525385 1.0000 100 chrXII:1017704-1019405 1.0000 100 chrX:545431-545531 1.0000 100 chrVII:10099-10505 1.0000 100 chrXIII:306027-307099 1.0000 100 chrXI:140743-141357 1.0000 100 chrIV:591034-592225 1.0000 100 chrXII:11014-11585 1.0000 100 chrXII:459607-460720 1.0000 100 chrVIII:562306-562582 1.0000 100 chrXIV:585395-586590 1.0000 100 chrIV:1016930-1017549 1.0000 100 chrVII:397882-398818 1.0000 100 chrIII:294658-295934 1.0000 100 chrXVI:575132-576482 1.0000 100 chrXV:709992-710509 1.0000 100 chrXV:424048-424771 1.0000 100 chrXIV:6516-7179 1.0000 100 chrVII:773941-774660 1.0000 100 chrXVI:74888-76747 1.0000 100 chrII:592328-593449 1.0000 100 chrXIV:506956-507644 1.0000 100 chrXVI:377902-379037 1.0000 100 chrV:135180-135715 1.0000 100 chrX:90017-90117 1.0000 100 chrVII:1003980-1004405 1.0000 100 chrX:396531-396631 1.0000 100 chrX:378160-378260 1.0000 100 chrVII:533477-535241 1.0000 100 chrII:332295-333390 1.0000 100 chrVIII:411010-411711 1.0000 100 chrVIII:147645-149568 1.0000 100 chrVII:986769-987845 1.0000 100 chrXV:796917-797418 1.0000 100 chrIX:197140-198015 1.0000 100 chrII:680346-682215 1.0000 100 chrXV:113295-113987 1.0000 100 chrIV:1175568-1176169 1.0000 100 chrIX:325501-326201 1.0000 100 chrXI:578784-579366 1.0000 100 chrXIII:572691-573350 1.0000 100 chrXI:142916-143858 1.0000 100 chrX:702792-702892 1.0000 100 chrXII:365393-366723 1.0000 100 chrXIII:751321-751641 1.0000 100 chrII:347373-347935 1.0000 100 chrXVI:280639-282962 1.0000 100 chrXIII:752968-754843 1.0000 100 chrII:477022-477820 1.0000 100 chrIX:382177-382433 1.0000 100 chrX:705135-705235 1.0000 100 chrX:122988-123088 1.0000 100 chrXVI:842900-843141 1.0000 100 chrXIII:674527-674822 1.0000 100 chrXV:380680-381248 1.0000 100 chrIX:386280-387134 1.0000 100 chrIII:13937-17292 1.0000 100 chrIII:177068-178857 1.0000 100 chrXVI:856442-857337 1.0000 100 chrXIV:560502-561015 1.0000 100 chrXIII:378568-379624 1.0000 100 chrXV:899930-901817 1.0000 100 chrXI:46482-47030 1.0000 100 chrII:644982-645486 1.0000 100 chrXV:253134-255078 1.0000 100 chrVII:794150-794710 1.0000 100 chrVII:823254-823705 1.0000 100 chrXII:253141-255066 1.0000 100 chrVIII:455505-456244 1.0000 100 chrXV:779671-780921 1.0000 100 chrXIV:88896-90115 1.0000 100 chrV:53501-54032 1.0000 100 chrIX:98654-100069 1.0000 100 chrIV:368815-369229 1.0000 100 chrII:555457-558503 1.0000 100 chrIX:316112-317620 1.0000 100 chrII:88931-89985 1.0000 100 chrX:73367-73467 1.0000 100 chrVI:269203-270159 1.0000 100 chrVII:807773-808093 1.0000 100 chrXI:382135-382492 1.0000 100 chrIX:299997-300546 1.0000 100 chrXII:241441-243710 1.0000 100 chrVII:726237-727210 1.0000 100 chrXI:83949-84443 1.0000 100 chrVIII:505782-506231 1.0000 100 chrIV:1201483-1202064 1.0000 100 chrXV:977590-977813 1.0000 100 chrXIII:886539-888326 1.0000 100 chrXIII:768185-768669 1.0000 100 chrXII:711668-713800 1.0000 100 chrXI:334037-335038 1.0000 100 chrXII:404115-404481 1.0000 100 chrVIII:381223-383400 1.0000 100 chrIII:68324-68716 1.0000 100 chrXIII:747744-748165 1.0000 100 chrXII:932055-932585 1.0000 100 chrXIV:575181-577315 1.0000 100 chrIV:519532-521191 1.0000 100 chrXIV:413279-416095 1.0000 100 chrVIII:475200-475929 1.0000 100 chrIV:1354475-1356050 1.0000 100 chrV:434376-434768 1.0000 100 chrVII:771937-772383 1.0000 100 chrVII:736179-736631 1.0000 100 chrVII:405297-405825 1.0000 100 chrXVI:452875-454064 1.0000 100 chrX:195311-195411 1.0000 100 chrXV:339970-340618 1.0000 100 chrIV:975959-977027 1.0000 100 chrII:5836-6995 1.0000 100 chrV:99897-100359 1.0000 100 chrXVI:502457-503233 1.0000 100 chrXVI:641210-642130 1.0000 100 chrX:745304-745404 1.0000 100 chrXII:636457-640298 1.0000 100 chrVII:73667-74152 1.0000 100 chrXIII:586459-586909 1.0000 100 chrIV:1329945-1330990 1.0000 100 chrX:233707-233807 1.0000 100 chrVIII:296809-297279 1.0000 100 chrXVI:172776-174117 1.0000 100 chrXV:1025716-1026198 1.0000 100 chrXII:201703-202995 1.0000 100 chrVII:700452-701268 1.0000 100 chrVII:23865-24129 1.0000 100 chrXIII:852010-852394 1.0000 100 chrXVI:228007-228298 1.0000 100 chrV:226073-226317 1.0000 100 chrIII:127514-128041 1.0000 100 chrXII:837578-839636 1.0000 100 chrIII:82101-82813 1.0000 100 chrXII:1028141-1028612 1.0000 100 chrXIII:923383-924372 1.0000 100 chrVIII:133577-134648 1.0000 100 chrXIII:296679-298896 1.0000 100 chrXV:1003520-1004923 1.0000 100 chrXV:27819-28154 1.0000 100 chrXV:977997-979547 1.0000 100 chrIV:233845-234829 1.0000 100 chrXI:517084-517563 1.0000 100 chrXII:262790-263940 1.0000 100 chrI:138927-139400 1.0000 100 chrXV:82793-83543 1.0000 100 chrXII:920866-921046 1.0000 100 chrXIII:161890-162445 1.0000 100 chrVII:185477-186097 1.0000 100 chrXIV:65151-65754 1.0000 100 chrXIV:631688-632140 1.0000 100 chrVII:286955-287666 1.0000 100 chrXIII:347063-347410 1.0000 100 chrVII:648814-649424 1.0000 100 chrXIII:731418-733533 1.0000 100 chrX:422602-422702 1.0000 100 chrIII:228440-229473 1.0000 100 chrXVI:559982-560525 1.0000 100 chrIV:1401202-1403312 1.0000 100 chrXII:628160-628990 1.0000 100 chrXII:231827-234855 1.0000 100 chrX:541299-541399 1.0000 100 chrXV:285580-285924 1.0000 100 chrXV:353884-354302 1.0000 100 chrXII:897644-899646 1.0000 100 chrIV:464971-465834 1.0000 100 chrIV:599392-600831 1.0000 100 chrXI:379491-380019 1.0000 100 chrXII:784114-784822 1.0000 100 chrX:355107-355207 1.0000 100 chrXV:1027773-1029147 1.0000 100 chrVI:64025-65358 1.0000 100 chrXVI:135287-135830 1.0000 100 chrXVI:785198-786239 1.0000 100 chrII:642694-643245 1.0000 100 chrIV:1062710-1063070 1.0000 100 chrXIV:229426-230799 1.0000 100 chrXV:594133-594825 1.0000 100 chrX:119307-119407 1.0000 100 chrVII:480933-484327 1.0000 100 chrI:141452-143688 1.0000 100 chrVII:857188-857655 1.0000 100 chrXVI:819270-819978 1.0000 100 chrXIV:502746-503716 1.0000 100 chrV:287439-288774 1.0000 100 chrVII:147867-149578 1.0000 100 chrXII:125170-125375 1.0000 100 chrVIII:237678-238143 1.0000 100 chrIV:27-321 1.0000 100 chrVIII:17016-18130 1.0000 100 chrVII:845231-845893 1.0000 100 chrIV:1150220-1151721 1.0000 100 chrVII:23259-23698 1.0000 100 chrVII:1000271-1000655 1.0000 100 chrXIV:330585-332503 1.0000 100 chrXV:228078-228621 1.0000 100 chrVII:848665-848918 1.0000 100 chrV:174684-175061 1.0000 100 chrIX:210505-210954 1.0000 100 chrXV:911891-913342 1.0000 100 chrIX:174810-175304 1.0000 100 chrIV:1075302-1075734 1.0000 100 chrIX:127128-128144 1.0000 100 chrXII:374191-374692 1.0000 100 chrIV:129545-131128 1.0000 100 chrX:374190-374290 1.0000 100 chrV:225229-225731 1.0000 100 chrVII:438226-440049 1.0000 100 chrIII:292345-293054 1.0000 100 chrXIII:549948-553225 1.0000 100 chrVII:228467-228836 1.0000 100 chrV:302869-303717 1.0000 100 chrX:160002-160102 1.0000 100 chrXIII:419931-420930 1.0000 100 chrX:227760-227860 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--SWI1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--SWI1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--SWI1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.298 C 0.202 G 0.202 T 0.298 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--SWI1/background): A 0.311 C 0.189 G 0.189 T 0.311 ******************************************************************************** ******************************************************************************** MOTIF RAGRTCVBSGGTTCGAYYCCSVBHGDGRSC MEME-1 width = 30 sites = 88 llr = 1702 E-value = 7.9e-353 ******************************************************************************** -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGAYYCCSVBHGDGRSC MEME-1 Description -------------------------------------------------------------------------------- Simplified A 47142:3:12::::2a2::::213121312 pos.-specific C :121:8443::::a::24a75324222127 probability G 52651:3357a:::8:2:::444:54654: matrix T 1:::72131::aa:::46:31:33221121 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 **** * * Relative 1.4 * ****** * Entropy 1.2 * ****** * (27.9 bits) 1.0 * * ******* *** * 0.7 * ** * ******** ***** * 0.5 **************** ******* * * 0.2 **************** ************* 0.0 ------------------------------ Multilevel GAGGTCCCGGGTTCGATTCCCGGCGGGGGC consensus AGCAATAGCA A CC TGCTATA AC sequence GT ACT T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGAYYCCSVBHGDGRSC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrIII:123330-123843 - 42 1.12e-14 TAGGGTGCGG GAGGTCCCGGGTTCGAGTCCCGGCTCGCCC CACATTGTTT chrIV:1201483-1202064 + 69 1.90e-12 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCCCTACAGGGC TA chrIX:299997-300546 - 8 1.90e-12 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCCCTACAGGGC TATCTTT chrV:135180-135715 - 29 1.90e-12 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCCCTACAGGGC TTTCTTTTTC chrXI:202828-203322 + 16 1.90e-12 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCCCTACAGGGC TTTCTTTTTA chrVI:226412-226946 - 60 1.90e-12 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCCCTACAGGGC TTATCTCTTT chrX:414750-414850 + 37 1.90e-12 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCCCTACAGGGC TAATATTTTT chrXVI:581837-582395 + 38 1.90e-12 TCTTAATCAT AAGGTTAGGGGTTCGAGCCCCCTACAGGGC TTTCTTTTTT chrXII:214658-215166 - 22 3.04e-12 TTGCAAGGAA GAGGTCATCGGTTCGATTCCGGTTGCGTCC ATTTATTTTT chrI:165999-166606 + 57 3.04e-12 TTGCAAGGAA GAGGTCATCGGTTCGATTCCGGTTGCGTCC AAATTTTTTT chrIX:210505-210954 + 29 3.54e-12 TAATAACGCG GGGATCAGCGGTTCGATCCCGCTAGAGACC ATATTTTTTT chrV:550960-551580 - 66 3.54e-12 ACGCG GGGATCAGCGGTTCGATCCCGCTAGAGACC AATTTTTTTG chrXIV:602093-602595 + 61 3.54e-12 TAATAACGCG GGGATCAGCGGTTCGATCCCGCTAGAGACC ATTCTTTTTT chrIV:667724-668253 - 70 3.54e-12 G GGGATCAGCGGTTCGATCCCGCTAGAGACC ATTTTTATTT chrXI:46482-47030 - 30 4.12e-12 TCGTAATGCG GGGATCGTGGGTTCAATTCCCACAGAGGGC ATTTGAAATT chrIV:1075302-1075734 - 5 8.60e-12 TCACACGGCA AAGGTCCCGAGTTCGATCCTCGGTTGGAAC ATTT chrIV:802536-803026 - 1 1.32e-11 TTTTGATCCG GACAACCCCGGTTCGAATCCGGGTAGGACC chrXII:448403-448971 - 14 1.32e-11 TTTTGATCCG GACAACCCCGGTTCGAATCCGGGTAGGACC TTCTTTTTTG chrIII:168096-168599 - 5 1.32e-11 TTTTGATCCG GACAACCCCGGTTCGAATCCGGGTAGGACC TTTT chrV:250106-250570 + 39 1.32e-11 TTTTGATCCG GACAACCCCGGTTCGAATCCGGGTAGGACC TTTTTTATTC chrIV:1016930-1017549 - 19 5.05e-11 TTCTCACCGT GGAGACCGGGGTTCGACTCCCCGCTTCGGA GTTTCTTTTT chrIV:83302-83835 + 70 6.52e-11 TTGCCATCGT TGGGCCCCCGGTTCGATTCCGGGCTTGCGC A chrXIV:567851-568502 + 61 6.52e-11 AAGCATGCGA GAGGCCCTGGGTTCAATTCCCAGCTCGCCC CTTTATATTT chrVII:930755-931236 - 9 6.52e-11 TTGCCATCGT TGGGCCCCCGGTTCGATTCCGGGCTTGCGC ATTTTTTT chrXIV:546947-547403 + 41 6.52e-11 AAGCATGCGA GAGGCCCTGGGTTCAATTCCCAGCTCGCCC CGTTATCTTT chrVII:779365-779909 + 70 6.52e-11 CTTCCAAGGT GGGGACACGGGTTCGATTCTCGTACCGCTC A chrXIII:290585-291180 + 10 6.52e-11 TTTCACCGT GGAGACCGGGGTTCGACTCCCCGTAGCGGA GTTTTCTTTT chrIV:410188-410719 + 18 9.48e-11 TAGCATGGGA GAGGTCTCCGGTTCGATTCCGGACTCGTCC AAATTATTTT chrXIII:320943-321343 - 55 9.48e-11 TAGCATGGGA GAGGTCTCCGGTTCGATTCCGGACTCGTCC ATTTTTTATT chrVIII:145994-146457 - 68 9.48e-11 GGA GAGGTCTCCGGTTCGATTCCGGACTCGTCC AATCTTTTTT chrXII:656677-657217 - 38 9.48e-11 TAGCATGGGA GAGGTCTCCGGTTCGATTCCGGACTCGTCC AAGTAAATAT chrXI:517735-518316 + 55 9.48e-11 TAGCATGGGA GAGGTCTCCGGTTCGATTCCGGACTCGTCC ATTTTAAAAT chrV:130791-131392 - 42 1.07e-10 TTTTGATCCG AACAACCCCGGTTCGAATCCGGGTAAGACC TATTTTTTTC chrXI:379491-380019 + 18 1.73e-10 TAACACGCAG AACGTCCCCAGTTCGATCCTGGGCGAAATC AATTAATTTT chrXIII:586459-586909 - 3 1.73e-10 TAACACGCAG AACGTCCCCAGTTCGATCCTGGGCGAAATC AT chrV:469221-469763 + 58 1.73e-10 TAACACGCAG AACGTCCCCAGTTCGATCCTGGGCGAAATC ATTTTTTAAA chrVIII:85007-85581 - 55 1.73e-10 TAACACGCAG AACGTCCCCAGTTCGATCCTGGGCGAAATC AATTTTTTTT chrXIII:372202-372762 - 14 1.73e-10 TAACACGCAG AACGTCCCCAGTTCGATCCTGGGCGAAATC ATTTTTTTAG chrXV:663516-664115 - 48 1.73e-10 TAACACGCAG AACGTCCCCAGTTCGATCCTGGGCGAAATC GTTTTTAAGA chrIII:82101-82813 - 56 1.95e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCCCGTATCGGA GTTTTTTTTT chrII:644982-645486 + 24 1.95e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCCCGTATCGGA GTTATTTTTT chrXI:140743-141357 - 19 1.95e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCCCGTATCGGA GTTTTCATTA chrVII:541606-542197 + 40 1.95e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCCCGTATCGGA GTGTTCTTTT chrV:176853-177429 + 49 1.95e-10 CTTTCACCGT GGAGACCGGGGTTCGACTCCCCGTATCGGA GTACTTTTTT chrIII:127514-128041 + 32 3.10e-10 TGTTAATCGC AAGATCGTGAGTTCAACCCTCACTGGGGTC GTTAATTTTT chrXIV:632392-632881 + 56 3.10e-10 TGTTAATCGC AAGATCGTGAGTTCAACCCTCACTGGGGTC GTTTTTTTTC chrVII:730949-731454 + 29 3.10e-10 TGTTAATCGC AAGATCGTGAGTTCAACCCTCACTGGGGTC GTTTTTTGCT chrXVI:810401-811079 + 29 3.10e-10 TGTTAATCGC AAGATCGTGAGTTCAACCCTCACTGGGGTC GTATTTTTTA chrX:422602-422702 + 45 3.88e-10 TCATAATCTG AAGGTCGAGAGTTCGAACCTCCCCTGGAGC ACATTTTCTT chrIV:1175568-1176169 + 53 3.88e-10 TCATAATCTG AAGGTCGAGAGTTCGAACCTCCCCTGGAGC ATTTTTGCCG chrX:374190-374290 - 64 4.34e-10 TAATCAG AAGATTATGGGTTCGACCCCCATCGTGAGT GCTTTGTTTC chrX:355107-355207 + 38 4.34e-10 TTCTAATCAG AAGATTATGGGTTCGACCCCCATCGTGAGT GCTTTGTTTC chrVII:736179-736631 + 26 4.34e-10 TTCTAATCAG AAGATTATGGGTTCGACCCCCATCGTGAGT GTTGTTTTTT chrVII:828450-829007 - 46 4.34e-10 TTCTAATCAG AAGATTATGGGTTCGACCCCCATCGTGAGT GCTTTTTTTG chrXI:162271-162770 - 18 4.34e-10 TTCTAATCAG AAGATTATGGGTTCGACCCCCATCGTGAGT GTTTTTTACA chrIX:174810-175304 + 66 5.41e-10 TAGTAATGTG GAGATCATCGGTTCAAATCCGATTGGAAGC AATTT chrIV:433996-434578 - 28 5.41e-10 TAGTAATGTG GAGATCATCGGTTCAAATCCGATTGGAAGC ATATTTTTAT chrXIV:104596-105178 + 10 5.41e-10 AGTAATGTG GAGATCATCGGTTCAAATCCGATTGGAAGC ATATTATTTT chrVIII:466730-467307 + 63 8.32e-10 TTGTAATGCA AAGGTCGCTAGTTCAATTCTGGCAGGTGGC ATTATACC chrXII:374191-374692 + 6 1.40e-09 ACCAG AAGATTCCAGGTTCAAGTCCTGGCGGGGAA GATTTTTTTG chrXV:339970-340618 - 56 1.40e-09 TACGAACCAG AAGATTCCAGGTTCAAGTCCTGGCGGGGAA GATTTTTTTT chrXI:578784-579366 + 5 1.40e-09 CCGA AATGTCAGGGGTTCGAGCCCCCTATGAGGA GTTCTTTACT chrV:492172-492581 - 27 1.40e-09 TACGAACCAG AAGATTCCAGGTTCAAGTCCTGGCGGGGAA GGATTATTTT chrXI:490711-491355 + 27 1.40e-09 TACGAACCAG AAGATTCCAGGTTCAAGTCCTGGCGGGGAA GAATTTTTTT chrIV:946119-946630 + 46 2.79e-09 ACGAAATCTT GAGATCGGGCGTTCGACTCGCCCCCGGGAG ATTTTTTTAT chrXIV:374630-375264 + 32 2.79e-09 AAGTCATCTG GAGGTCCTGTGTTCGATCCACAGAGTTCGC AATTTGAAAA chrX:542700-542800 - 29 2.79e-09 ACGAAATCTT GAGATCGGGCGTTCGACTCGCCCCCGGGAG ATTTTTTTGT chrIV:1095088-1095727 - 14 2.79e-09 AAGATATCTG GAGGTCCTGTGTTCGATCCACAGAGTTCGC ATTTTTATTT chrVI:167251-167714 + 63 2.79e-09 ACGAAATCTT GAGATCGGGCGTTCGACTCGCCCCCGGGAG ATATTTTT chrX:354021-354121 + 29 2.79e-09 ACGAAATCTT GAGATCGGGCGTTCGACTCGCCCCCGGGAG ATTTTTTTAA chrVII:661517-662051 + 56 5.38e-09 TTGTAATGCA AAGGTCGTTAGTTCAATTCTGACAGGTGGC ATAATTTTAT chrVI:157682-158216 - 18 1.19e-08 AAGTTATCTG GAGGTCCTGTGTTCGATCCACAGAATTCGC ATTCATTTTT chrVII:561405-561970 - 26 1.66e-08 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCTGCAGTTGTC GTTATTTTTG chrXVI:775534-776091 - 4 1.66e-08 TGCAAATCTG TTGGTCCTTAGTTCGATCCTGAGTGCGAGC TTT chrX:523783-523883 - 13 1.66e-08 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCTGCAGTTGTC GTTATTTTTT chrI:182352-182787 - 4 1.66e-08 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCTGCAGTTGTC GTT chrIV:980665-981279 - 53 1.66e-08 TTTGGGCTTT GCCCGCGCAGGTTCGAGTCCTGCAGTTGTC GTTTTTACCA chrX:541299-541399 + 41 1.95e-08 TTGTCGCGTG CCAGATCGGGGTTCAATTCCCCGTCGCGGA GATTTTTTTG chrIX:324025-324612 - 36 1.95e-08 TTGTCGCGTG CCAGATCGGGGTTCAATTCCCCGTCGCGGA GATTTTTTTA chrXII:426914-427454 + 39 1.95e-08 TTGTCGCGTG CCAGATCGGGGTTCAATTCCCCGTCGCGGA GAATTTTTTT chrVII:878086-879370 - 33 1.95e-08 TTGCAATCGA AGGGTTGCAGGTTCAATTCCTGTCCGTTTC ATTTTATTAT chrV:434376-434768 - 20 1.07e-07 TTGTGGCCGA TGAAACCCTGGTTCGATTCTAGGAGATGGC ATTTTCTTTT chrXI:313101-313690 - 57 1.07e-07 TTGTGGCCGA TGAAACCCTGGTTCGATTCTAGGAGATGGC ATTTTATTTT chrII:347373-347935 + 52 1.40e-07 TTGGACGGTT GTCCGCGCGAGTTCGAACCTCGCATCCTTC AGTAATATTT chrXIV:725816-726415 - 70 1.40e-07 T GTCCGCGCGAGTTCGAACCTCGCATCCTTC AGTATTTTTT chrII:9343-9912 + 59 1.40e-07 TTGGACGGTT GTCCGCGCGAGTTCGAACCTCGCATCCTTC AGTATTTTTT chrXII:784114-784822 + 5 2.79e-07 TTTT ACCTGCGCAGGTTCGAATCCTGTCTGTGAC GCTTTTTTTA chrXV:709992-710509 + 42 3.74e-07 TCATAACCCT GATGTCCTCGGATCGAAACCGAGCGGCGCT AATTTTTTTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGAYYCCSVBHGDGRSC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123330-123843 1.1e-14 41_[-1]_29 chrIV:1201483-1202064 1.9e-12 68_[+1]_2 chrIX:299997-300546 1.9e-12 7_[-1]_63 chrV:135180-135715 1.9e-12 28_[-1]_42 chrXI:202828-203322 1.9e-12 15_[+1]_55 chrVI:226412-226946 1.9e-12 59_[-1]_11 chrX:414750-414850 1.9e-12 36_[+1]_34 chrXVI:581837-582395 1.9e-12 37_[+1]_33 chrXII:214658-215166 3e-12 21_[-1]_49 chrI:165999-166606 3e-12 56_[+1]_14 chrIX:210505-210954 3.5e-12 28_[+1]_42 chrV:550960-551580 3.5e-12 65_[-1]_5 chrXIV:602093-602595 3.5e-12 60_[+1]_10 chrIV:667724-668253 3.5e-12 69_[-1]_1 chrXI:46482-47030 4.1e-12 29_[-1]_41 chrIV:1075302-1075734 8.6e-12 4_[-1]_66 chrIV:802536-803026 1.3e-11 [-1]_70 chrXII:448403-448971 1.3e-11 13_[-1]_57 chrIII:168096-168599 1.3e-11 4_[-1]_66 chrV:250106-250570 1.3e-11 38_[+1]_32 chrIV:1016930-1017549 5e-11 18_[-1]_52 chrIV:83302-83835 6.5e-11 69_[+1]_1 chrXIV:567851-568502 6.5e-11 60_[+1]_10 chrVII:930755-931236 6.5e-11 8_[-1]_62 chrXIV:546947-547403 6.5e-11 40_[+1]_30 chrVII:779365-779909 6.5e-11 69_[+1]_1 chrXIII:290585-291180 6.5e-11 9_[+1]_61 chrIV:410188-410719 9.5e-11 17_[+1]_53 chrXIII:320943-321343 9.5e-11 54_[-1]_16 chrVIII:145994-146457 9.5e-11 67_[-1]_3 chrXII:656677-657217 9.5e-11 37_[-1]_33 chrXI:517735-518316 9.5e-11 54_[+1]_16 chrV:130791-131392 1.1e-10 41_[-1]_29 chrXI:379491-380019 1.7e-10 17_[+1]_53 chrXIII:586459-586909 1.7e-10 2_[-1]_68 chrV:469221-469763 1.7e-10 57_[+1]_13 chrVIII:85007-85581 1.7e-10 54_[-1]_16 chrXIII:372202-372762 1.7e-10 13_[-1]_57 chrXV:663516-664115 1.7e-10 47_[-1]_23 chrIII:82101-82813 2e-10 55_[-1]_15 chrII:644982-645486 2e-10 23_[+1]_47 chrXI:140743-141357 2e-10 18_[-1]_52 chrVII:541606-542197 2e-10 39_[+1]_31 chrV:176853-177429 2e-10 48_[+1]_22 chrIII:127514-128041 3.1e-10 31_[+1]_39 chrXIV:632392-632881 3.1e-10 55_[+1]_15 chrVII:730949-731454 3.1e-10 28_[+1]_42 chrXVI:810401-811079 3.1e-10 28_[+1]_42 chrX:422602-422702 3.9e-10 44_[+1]_26 chrIV:1175568-1176169 3.9e-10 52_[+1]_18 chrX:374190-374290 4.3e-10 63_[-1]_7 chrX:355107-355207 4.3e-10 37_[+1]_33 chrVII:736179-736631 4.3e-10 25_[+1]_45 chrVII:828450-829007 4.3e-10 45_[-1]_25 chrXI:162271-162770 4.3e-10 17_[-1]_53 chrIX:174810-175304 5.4e-10 65_[+1]_5 chrIV:433996-434578 5.4e-10 27_[-1]_43 chrXIV:104596-105178 5.4e-10 9_[+1]_61 chrVIII:466730-467307 8.3e-10 62_[+1]_8 chrXII:374191-374692 1.4e-09 5_[+1]_65 chrXV:339970-340618 1.4e-09 55_[-1]_15 chrXI:578784-579366 1.4e-09 4_[+1]_66 chrV:492172-492581 1.4e-09 26_[-1]_44 chrXI:490711-491355 1.4e-09 26_[+1]_44 chrIV:946119-946630 2.8e-09 45_[+1]_25 chrXIV:374630-375264 2.8e-09 31_[+1]_39 chrX:542700-542800 2.8e-09 28_[-1]_42 chrIV:1095088-1095727 2.8e-09 13_[-1]_57 chrVI:167251-167714 2.8e-09 62_[+1]_8 chrX:354021-354121 2.8e-09 28_[+1]_42 chrVII:661517-662051 5.4e-09 55_[+1]_15 chrVI:157682-158216 1.2e-08 17_[-1]_53 chrVII:561405-561970 1.7e-08 25_[-1]_45 chrXVI:775534-776091 1.7e-08 3_[-1]_67 chrX:523783-523883 1.7e-08 12_[-1]_58 chrI:182352-182787 1.7e-08 3_[-1]_67 chrIV:980665-981279 1.7e-08 52_[-1]_18 chrX:541299-541399 2e-08 40_[+1]_30 chrIX:324025-324612 2e-08 35_[-1]_35 chrXII:426914-427454 2e-08 38_[+1]_32 chrVII:878086-879370 2e-08 32_[-1]_38 chrV:434376-434768 1.1e-07 19_[-1]_51 chrXI:313101-313690 1.1e-07 56_[-1]_14 chrII:347373-347935 1.4e-07 51_[+1]_19 chrXIV:725816-726415 1.4e-07 69_[-1]_1 chrII:9343-9912 1.4e-07 58_[+1]_12 chrXII:784114-784822 2.8e-07 4_[+1]_66 chrXV:709992-710509 3.7e-07 41_[+1]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGAYYCCSVBHGDGRSC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RAGRTCVBSGGTTCGAYYCCSVBHGDGRSC width=30 seqs=88 chrIII:123330-123843 ( 42) GAGGTCCCGGGTTCGAGTCCCGGCTCGCCC 1 chrIV:1201483-1202064 ( 69) AAGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrIX:299997-300546 ( 8) AAGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrV:135180-135715 ( 29) AAGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrXI:202828-203322 ( 16) AAGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrVI:226412-226946 ( 60) AAGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrX:414750-414850 ( 37) AAGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrXVI:581837-582395 ( 38) AAGGTTAGGGGTTCGAGCCCCCTACAGGGC 1 chrXII:214658-215166 ( 22) GAGGTCATCGGTTCGATTCCGGTTGCGTCC 1 chrI:165999-166606 ( 57) GAGGTCATCGGTTCGATTCCGGTTGCGTCC 1 chrIX:210505-210954 ( 29) GGGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrV:550960-551580 ( 66) GGGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrXIV:602093-602595 ( 61) GGGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrIV:667724-668253 ( 70) GGGATCAGCGGTTCGATCCCGCTAGAGACC 1 chrXI:46482-47030 ( 30) GGGATCGTGGGTTCAATTCCCACAGAGGGC 1 chrIV:1075302-1075734 ( 5) AAGGTCCCGAGTTCGATCCTCGGTTGGAAC 1 chrIV:802536-803026 ( 1) GACAACCCCGGTTCGAATCCGGGTAGGACC 1 chrXII:448403-448971 ( 14) GACAACCCCGGTTCGAATCCGGGTAGGACC 1 chrIII:168096-168599 ( 5) GACAACCCCGGTTCGAATCCGGGTAGGACC 1 chrV:250106-250570 ( 39) GACAACCCCGGTTCGAATCCGGGTAGGACC 1 chrIV:1016930-1017549 ( 19) GGAGACCGGGGTTCGACTCCCCGCTTCGGA 1 chrIV:83302-83835 ( 70) TGGGCCCCCGGTTCGATTCCGGGCTTGCGC 1 chrXIV:567851-568502 ( 61) GAGGCCCTGGGTTCAATTCCCAGCTCGCCC 1 chrVII:930755-931236 ( 9) TGGGCCCCCGGTTCGATTCCGGGCTTGCGC 1 chrXIV:546947-547403 ( 41) GAGGCCCTGGGTTCAATTCCCAGCTCGCCC 1 chrVII:779365-779909 ( 70) GGGGACACGGGTTCGATTCTCGTACCGCTC 1 chrXIII:290585-291180 ( 10) GGAGACCGGGGTTCGACTCCCCGTAGCGGA 1 chrIV:410188-410719 ( 18) GAGGTCTCCGGTTCGATTCCGGACTCGTCC 1 chrXIII:320943-321343 ( 55) GAGGTCTCCGGTTCGATTCCGGACTCGTCC 1 chrVIII:145994-146457 ( 68) GAGGTCTCCGGTTCGATTCCGGACTCGTCC 1 chrXII:656677-657217 ( 38) GAGGTCTCCGGTTCGATTCCGGACTCGTCC 1 chrXI:517735-518316 ( 55) GAGGTCTCCGGTTCGATTCCGGACTCGTCC 1 chrV:130791-131392 ( 42) AACAACCCCGGTTCGAATCCGGGTAAGACC 1 chrXI:379491-380019 ( 18) AACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrXIII:586459-586909 ( 3) AACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrV:469221-469763 ( 58) AACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrVIII:85007-85581 ( 55) AACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrXIII:372202-372762 ( 14) AACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrXV:663516-664115 ( 48) AACGTCCCCAGTTCGATCCTGGGCGAAATC 1 chrIII:82101-82813 ( 56) GGAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrII:644982-645486 ( 24) GGAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrXI:140743-141357 ( 19) GGAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrVII:541606-542197 ( 40) GGAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrV:176853-177429 ( 49) GGAGACCGGGGTTCGACTCCCCGTATCGGA 1 chrIII:127514-128041 ( 32) AAGATCGTGAGTTCAACCCTCACTGGGGTC 1 chrXIV:632392-632881 ( 56) AAGATCGTGAGTTCAACCCTCACTGGGGTC 1 chrVII:730949-731454 ( 29) AAGATCGTGAGTTCAACCCTCACTGGGGTC 1 chrXVI:810401-811079 ( 29) AAGATCGTGAGTTCAACCCTCACTGGGGTC 1 chrX:422602-422702 ( 45) AAGGTCGAGAGTTCGAACCTCCCCTGGAGC 1 chrIV:1175568-1176169 ( 53) AAGGTCGAGAGTTCGAACCTCCCCTGGAGC 1 chrX:374190-374290 ( 64) AAGATTATGGGTTCGACCCCCATCGTGAGT 1 chrX:355107-355207 ( 38) AAGATTATGGGTTCGACCCCCATCGTGAGT 1 chrVII:736179-736631 ( 26) AAGATTATGGGTTCGACCCCCATCGTGAGT 1 chrVII:828450-829007 ( 46) AAGATTATGGGTTCGACCCCCATCGTGAGT 1 chrXI:162271-162770 ( 18) AAGATTATGGGTTCGACCCCCATCGTGAGT 1 chrIX:174810-175304 ( 66) GAGATCATCGGTTCAAATCCGATTGGAAGC 1 chrIV:433996-434578 ( 28) GAGATCATCGGTTCAAATCCGATTGGAAGC 1 chrXIV:104596-105178 ( 10) GAGATCATCGGTTCAAATCCGATTGGAAGC 1 chrVIII:466730-467307 ( 63) AAGGTCGCTAGTTCAATTCTGGCAGGTGGC 1 chrXII:374191-374692 ( 6) AAGATTCCAGGTTCAAGTCCTGGCGGGGAA 1 chrXV:339970-340618 ( 56) AAGATTCCAGGTTCAAGTCCTGGCGGGGAA 1 chrXI:578784-579366 ( 5) AATGTCAGGGGTTCGAGCCCCCTATGAGGA 1 chrV:492172-492581 ( 27) AAGATTCCAGGTTCAAGTCCTGGCGGGGAA 1 chrXI:490711-491355 ( 27) AAGATTCCAGGTTCAAGTCCTGGCGGGGAA 1 chrIV:946119-946630 ( 46) GAGATCGGGCGTTCGACTCGCCCCCGGGAG 1 chrXIV:374630-375264 ( 32) GAGGTCCTGTGTTCGATCCACAGAGTTCGC 1 chrX:542700-542800 ( 29) GAGATCGGGCGTTCGACTCGCCCCCGGGAG 1 chrIV:1095088-1095727 ( 14) GAGGTCCTGTGTTCGATCCACAGAGTTCGC 1 chrVI:167251-167714 ( 63) GAGATCGGGCGTTCGACTCGCCCCCGGGAG 1 chrX:354021-354121 ( 29) GAGATCGGGCGTTCGACTCGCCCCCGGGAG 1 chrVII:661517-662051 ( 56) AAGGTCGTTAGTTCAATTCTGACAGGTGGC 1 chrVI:157682-158216 ( 18) GAGGTCCTGTGTTCGATCCACAGAATTCGC 1 chrVII:561405-561970 ( 26) GCCCGCGCAGGTTCGAGTCCTGCAGTTGTC 1 chrXVI:775534-776091 ( 4) TTGGTCCTTAGTTCGATCCTGAGTGCGAGC 1 chrX:523783-523883 ( 13) GCCCGCGCAGGTTCGAGTCCTGCAGTTGTC 1 chrI:182352-182787 ( 4) GCCCGCGCAGGTTCGAGTCCTGCAGTTGTC 1 chrIV:980665-981279 ( 53) GCCCGCGCAGGTTCGAGTCCTGCAGTTGTC 1 chrX:541299-541399 ( 41) CCAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrIX:324025-324612 ( 36) CCAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrXII:426914-427454 ( 39) CCAGATCGGGGTTCAATTCCCCGTCGCGGA 1 chrVII:878086-879370 ( 33) AGGGTTGCAGGTTCAATTCCTGTCCGTTTC 1 chrV:434376-434768 ( 20) TGAAACCCTGGTTCGATTCTAGGAGATGGC 1 chrXI:313101-313690 ( 57) TGAAACCCTGGTTCGATTCTAGGAGATGGC 1 chrII:347373-347935 ( 52) GTCCGCGCGAGTTCGAACCTCGCATCCTTC 1 chrXIV:725816-726415 ( 70) GTCCGCGCGAGTTCGAACCTCGCATCCTTC 1 chrII:9343-9912 ( 59) GTCCGCGCGAGTTCGAACCTCGCATCCTTC 1 chrXII:784114-784822 ( 5) ACCTGCGCAGGTTCGAATCCTGTCTGTGAC 1 chrXV:709992-710509 ( 42) GATGTCCTCGGATCGAAACCGAGCGGCGCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGAYYCCSVBHGDGRSC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 10.9993 E= 7.9e-353 35 -247 144 -245 108 -105 12 -278 -119 20 173 -377 22 -124 153 -477 -61 -205 -105 108 -1310 204 -1310 -45 -25 120 41 -245 -377 116 65 -25 -145 76 144 -245 -53 -205 190 -319 -1310 -1310 241 -1310 -477 -1310 -1310 167 -1310 -1310 -1310 168 -1310 241 -1310 -1310 -45 -1310 204 -1310 168 -1310 -1310 -1310 -87 27 4 39 -477 116 -1310 87 -1310 241 -1310 -1310 -319 183 -205 -32 -377 144 90 -145 -38 76 123 -1310 -245 27 120 -13 3 108 -1310 -13 -119 -5 131 -53 -38 -15 95 -45 -145 -24 162 -108 -2 -88 131 -132 -145 27 123 -53 -87 193 -205 -219 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGAYYCCSVBHGDGRSC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 88 E= 7.9e-353 0.397727 0.034091 0.511364 0.056818 0.659091 0.090909 0.204545 0.045455 0.136364 0.215909 0.625000 0.022727 0.363636 0.079545 0.545455 0.011364 0.204545 0.045455 0.090909 0.659091 0.000000 0.772727 0.000000 0.227273 0.261364 0.431818 0.250000 0.056818 0.022727 0.420455 0.295455 0.261364 0.113636 0.318182 0.511364 0.056818 0.215909 0.045455 0.704545 0.034091 0.000000 0.000000 1.000000 0.000000 0.011364 0.000000 0.000000 0.988636 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.227273 0.000000 0.772727 0.000000 1.000000 0.000000 0.000000 0.000000 0.170455 0.227273 0.193182 0.409091 0.011364 0.420455 0.000000 0.568182 0.000000 1.000000 0.000000 0.000000 0.034091 0.670455 0.045455 0.250000 0.022727 0.511364 0.352273 0.113636 0.238636 0.318182 0.443182 0.000000 0.056818 0.227273 0.431818 0.284091 0.318182 0.397727 0.000000 0.284091 0.136364 0.181818 0.465909 0.215909 0.238636 0.170455 0.363636 0.227273 0.113636 0.159091 0.579545 0.147727 0.306818 0.102273 0.465909 0.125000 0.113636 0.227273 0.443182 0.215909 0.170455 0.715909 0.045455 0.068182 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RAGRTCVBSGGTTCGAYYCCSVBHGDGRSC MEME-1 regular expression -------------------------------------------------------------------------------- [GA][AG][GC][GA][TA][CT][CAG][CGT][GC][GA]GTTC[GA]A[TC][TC]C[CT][CG][GCA][GTC][CAT][GT][GAT]G[GA][GCT]C -------------------------------------------------------------------------------- Time 352.28 secs. ******************************************************************************** ******************************************************************************** MOTIF TAMCCACTRSRCCAMRNRVSC MEME-2 width = 21 sites = 95 llr = 1395 E-value = 2.8e-223 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAMCCACTRSRCCAMRNRVSC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 365:3a::424::a333331: pos.-specific C 115a5:9:13:a7:5121359 probability G ::::2:::356::::43544: matrix T 63::::1a1:::3:2121::: bits 2.4 * * 2.2 * * 1.9 * * * 1.7 * ** * * * Relative 1.4 * *** *** * Entropy 1.2 * *** **** * (21.2 bits) 1.0 * *** **** ** 0.7 ****** **** ** 0.5 ******** ****** *** 0.2 **************** **** 0.0 --------------------- Multilevel TACCCACTAGGCCACGGGGCC consensus ATA A GCA T AAAACG sequence G T C A T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRSRCCAMRNRVSC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXIII:768185-768669 + 44 1.06e-10 GGGAGCGCGC TACCGACTACGCCACACGCCC ATTTCTTATT chrXVI:856442-857337 - 63 1.06e-10 GGGAGCGCGC TACCGACTACGCCACACGCCC GAATCTTGTT chrVI:204770-205209 + 37 1.06e-10 GGGAGCGCGC TACCGACTACGCCACACGCCC GAACGTTTGT chrXI:219588-220151 - 76 1.06e-10 GCGC TACCGACTACGCCACACGCCC TATTTACTGT chrXI:517735-518316 - 13 1.06e-10 GGGAGCGCGC TACCGACTACGCCACACGCCC ATAGTAGATA chrV:442985-443523 + 51 1.18e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC AAATTTTAAT chrXII:1051875-1052389 + 42 1.18e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC ATGAAAAGGA chrXIV:602093-602595 - 18 1.18e-09 ACGGTGCCTT AACCAACTGGGCCAAGAGACC ATTGTTATCT chrVII:794150-794710 - 37 1.67e-09 GGAAGCGCGC TACCAACTGCGCCATGTGCCC GCAATCTATG chrXII:214658-215166 + 73 1.67e-09 GGAAGCGCGC TACCAACTGCGCCATGTGCCC TAAAACG chrI:165999-166606 - 15 1.67e-09 GGAAGCGCGC TACCAACTGCGCCATGTGCCC AACTCATTAC chrI:138927-139400 - 39 2.32e-09 AGCGAGAATC ATACCACTAGACCACACGCCC GTACTAATTG chrXV:300837-301430 - 14 2.32e-09 AGCGAGAATC ATACCACTAGACCACACGCCC GATCTTTTCT chrXIII:195901-196441 + 29 2.32e-09 AGCGAGAATC ATACCACTAGACCACACGCCC TTGTGAACTT chrVI:101144-101607 - 51 2.32e-09 AGCGAGAATC ATACCACTAGACCACACGCCC GAATTATTGT chrXII:92319-92870 - 4 2.32e-09 AGCGAGAATC ATACCACTAGACCACACGCCC TTA chrXV:464229-464680 - 46 2.32e-09 AGCGAGAATC ATACCACTAGACCACACGCCC TTGTTAACTT chrXI:46482-47030 + 80 4.35e-09 GTGCGATGCC TTACCACTTGGCCAAAAGGGC chrXIII:586459-586909 + 55 5.85e-09 CAGATGCCAT AACCGACTAGACCACGAAACC ATAGTAAGTT chrVII:73667-74152 + 23 5.85e-09 CAGATGCCAT AACCGACTAGACCACGAAACC ACTTAATTGA chrVII:823254-823705 - 53 5.85e-09 CAGATGCCAT AACCGACTAGACCACGAAACC ACTCTTATTG chrX:378160-378260 - 46 5.85e-09 CAGATGCCAT AACCGACTAGACCACGAAACC TATTAATTTA chrV:469221-469763 - 15 5.85e-09 CAGATGCCAT AACCGACTAGACCACGAAACC AATTATTTCT chrXII:687639-688228 + 29 5.85e-09 CAGATGCCAT AACCGACTAGACCACGAAACC TATTATTTAT chrVII:412100-412596 + 49 5.85e-09 CAGATGCCAT AACCGACTAGACCACGAAACC AGTTTTTTGA chrV:438375-438980 - 73 5.85e-09 ATGCCAT AACCGACTAGACCACGAAACC TAATTTGTTG chrXIII:372202-372762 + 66 5.85e-09 CAGATGCCAT AACCGACTAGACCACGAAACC AGGTTTTATT chrIV:1305281-1305951 - 64 6.75e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC TTAATTTGTA chrIV:437522-438058 - 32 6.75e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC TTACTAATGA chrVIII:132813-133363 + 49 6.75e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC ACTTATTATA chrX:523783-523883 + 73 6.75e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC TTTAATC chrI:182352-182787 + 64 6.75e-09 TCTTTCGCCT TAACCACTCGGCCAAGTTGCC AAAATTGTAT chrIV:1150220-1151721 + 1 1.02e-08 . TAACCACTCGGCCACTGGGAC TGAAACACTT chrIII:227643-228277 - 32 1.02e-08 TCTCTCGCCT TAACCACTCGGCCATAGTGCC ATTTCGATTT chrVI:191311-191831 + 72 1.02e-08 GGCATCGCCT TAACCACTCGGCCACTGGGAC AGAATCTC chrXIV:96015-96637 + 16 1.73e-08 GGTGGGATGA TAACCACTACACTAACCGCCC ATGTGTTGGA chrVII:779365-779909 - 29 1.73e-08 GGTGGGATGA TAACCACTACACTAACCGCCC GGGGTTAACT chrX:617699-617799 - 17 1.96e-08 CTGACGCCTT AAACCACTCGGCCAAACTCCC ATTGTTTGTT chrIX:174810-175304 - 24 2.22e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC TCGTACTTGT chrXV:353884-354302 + 50 2.22e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC AGTAAACCGT chrXIV:560502-561015 + 37 2.22e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC CCGTTATTAC chrIV:433996-434578 + 79 2.22e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC T chrII:266137-266652 - 34 2.22e-08 TGTGGCGCCT TACCAACTTGGCCATAGAAGC AGTTTTTGAT chrIV:802536-803026 + 51 3.18e-08 CCGAAAGTGA TAACCACTACACTATAGGACC GACAATTCAT chrIV:645004-645415 + 45 3.18e-08 CCGAAAGTGA TAACCACTACACTATAGGACC GTAACAACTG chrXII:448403-448971 + 64 3.18e-08 CCGAAAGTGA TAACCACTACACTATAGGACC GGAACTTCTT chrIII:168096-168599 + 55 3.18e-08 CCGAAAGTGA TAACCACTACACTATAGGACC AGGACTTCTT chrXVI:775534-776091 + 54 3.58e-08 ATCTGCTGCG CTACCACTGCGCCATACGAGC TTTTGAATTA chrX:396531-396631 + 38 4.01e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TTACTTTTGA chrIV:83302-83835 - 30 4.01e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TAAGTGAACT chrX:531422-531522 - 74 4.01e-08 TGGATT TTACCACTAAACCACTTGCGC TCACTAATTG chrVII:930755-931236 + 58 4.01e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC TTACTGATTA chrXV:281759-282532 - 69 4.01e-08 ACGTTGGATT TTACCACTAAACCACTTGCGC GCTTTCATGT chrVII:185477-186097 + 29 8.60e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TATTTCGTTG chrIV:1201483-1202064 - 27 8.60e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TATTTATTTG chrIX:299997-300546 + 59 8.60e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TATTTCGTTG chrV:135180-135715 + 80 8.60e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC chrVII:122047-122498 - 47 8.60e-08 TCATACGCGC TACCGATTGCGCCAACAAGGC TAATTCGTTG chrVII:1003980-1004405 - 74 1.06e-07 AACGCT CTACCACTAAGCTAAGGAGGC AAACCCTTGA chrIV:1256885-1257316 + 9 1.06e-07 ATGAATTC TAACCACTGAACCACTTTCGC TAAGAAGATC chrVII:661517-662051 - 15 1.06e-07 GTGCAACGCT CTACCACTAAGCTAAGGAGGC AAATTTTTAC chrVIII:466730-467307 - 22 1.06e-07 GTGCAACGCT CTACCACTAAGCTAAGGAGGC TAAAAATACA chrXIII:747744-748165 + 39 1.29e-07 GTCAGACGCG TTGCCATTACGCCACGCGAGC TAGTCATATG chrIV:568521-569196 - 74 1.29e-07 GACGCG TTGCCATTACGCCACGCGAGC TACTATTTGT chrXI:162271-162770 + 68 1.29e-07 GTCAGACGCG TTGCCATTACGCCACGCGAGC TAATATTTGT chrIV:488513-489221 + 33 1.57e-07 GCGACGTCTT GAACCACTGGACCATTGGACC GGAAACCCAT chrII:326549-327167 + 37 1.57e-07 GCGACGTCTT GAACCACTGGACCATTGGACC CGGAACTCGA chrXIV:631688-632140 + 33 1.73e-07 AGCGAGAATC ATACCTCTAGACCACACGCCC GGTAGAAGTT chrXV:228078-228621 - 32 2.09e-07 CGCACGCCTT AACCAACTTGGCCATGGAGTC TAATATTTTA chrXIV:632392-632881 - 13 2.09e-07 CGCACGCCTT AACCAACTTGGCCATGGAGTC ACTTTAAATT chrXIV:102488-102983 - 31 2.09e-07 CGCACGCCTT AACCAACTTGGCCATGGAGTC TTATAATATA chrXII:489292-489576 - 35 5.05e-07 CGCGTATGGT CACCCACTACACTACTCGGTC AGGCTCTTAC chrV:434376-434768 + 70 5.49e-07 CGATGTGTAC TAACCACTATACTAAGATGGC GACTTTTCAA chrVII:110430-110928 + 47 5.49e-07 CGATGTGTAC TAACCACTATACTAAGATGGC AGGTAATTAT chrVIII:62536-62997 - 39 5.49e-07 CGATGTGTAC TAACCACTATACTAAGATGGC ATATGATTTT chrVIII:237678-238143 + 59 7.60e-07 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC TTACTATTTG chrXVI:559982-560525 + 66 7.60e-07 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC TCAATTTCTA chrXIII:351977-352529 - 77 7.60e-07 CTC TCCCAACTGAGCTAAATCCGC TTATATTCAT chrVIII:358305-358805 + 44 7.60e-07 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC TTACTATTTG chrXVI:622287-622907 + 64 7.60e-07 TCTGGCGCTC TCCCAACTGAGCTAAATCCGC ATATCAGAAT chrX:422602-422702 - 3 1.12e-06 ACTGACGCTC TTCCTACTGAGCTACTGAAGC AT chrIV:1175568-1176169 - 11 1.12e-06 ACTGACGCTC TTCCTACTGAGCTACTGAAGC TTTGTTTTGT chrX:690527-690627 + 49 1.30e-06 GTTCCATTCA ACCCAACTTTACCACCAGGGC ACACTTCTTC chrXV:438384-438986 - 8 1.51e-06 CCGAACGCTC TACCAACTGAGCTAACAAGGA TGAGTTC chrIV:359339-359899 - 8 1.51e-06 CCGAACGCTC TACCAACTGAGCTAACAAGGA TGAGTTC chrXI:83949-84443 - 62 1.74e-06 CTGCCGCCTT AGACCACTCGGCCAACCCTCC ATACAAATTT chrII:9343-9912 - 6 1.74e-06 CTGCCGCCTT AGACCACTCGGCCAACCCTCC ACGAA chrV:99897-100359 - 55 2.14e-06 GCCCTGCGCG CTTCCACTGCGCCACGGCGCT TAGCCAACTT chrXV:709992-710509 - 1 2.14e-06 GCCCTGCGCG CTTCCACTGCGCCACGGCGCT chrXVI:338676-339157 + 33 2.14e-06 GCCCTGCGCG CTTCCACTGCGCCACGGCGCT GCTAAATCAT chrX:545431-545531 + 2 2.46e-06 A TAACCTCTTGGGCAAAGGCGC AAATAGTTGC chrV:492172-492581 + 78 2.81e-06 CCAGACGCCG TGACCATTGGGCCACGAGGAA TA chrIV:619678-620404 + 30 2.81e-06 CCAGACGCCG TGACCATTGGGCCACGAGGAA CAAGATTTCT chrVI:167251-167714 - 5 4.68e-06 TTGCGCCTTA AACCAACTTGGCTACCGAGAG TCGT chrXIII:168561-169074 - 28 4.68e-06 TTGCGCCTTA AACCAACTTGGCTACCGAGAG TGACTATTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRSRCCAMRNRVSC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXIII:768185-768669 1.1e-10 43_[+2]_36 chrXVI:856442-857337 1.1e-10 62_[-2]_17 chrVI:204770-205209 1.1e-10 36_[+2]_43 chrXI:219588-220151 1.1e-10 75_[-2]_4 chrXI:517735-518316 1.1e-10 12_[-2]_67 chrV:442985-443523 1.2e-09 50_[+2]_29 chrXII:1051875-1052389 1.2e-09 41_[+2]_38 chrXIV:602093-602595 1.2e-09 17_[-2]_62 chrVII:794150-794710 1.7e-09 36_[-2]_43 chrXII:214658-215166 1.7e-09 72_[+2]_7 chrI:165999-166606 1.7e-09 14_[-2]_65 chrI:138927-139400 2.3e-09 38_[-2]_41 chrXV:300837-301430 2.3e-09 13_[-2]_66 chrXIII:195901-196441 2.3e-09 28_[+2]_51 chrVI:101144-101607 2.3e-09 50_[-2]_29 chrXII:92319-92870 2.3e-09 3_[-2]_76 chrXV:464229-464680 2.3e-09 45_[-2]_34 chrXI:46482-47030 4.4e-09 79_[+2] chrXIII:586459-586909 5.8e-09 54_[+2]_25 chrVII:73667-74152 5.8e-09 22_[+2]_57 chrVII:823254-823705 5.8e-09 52_[-2]_27 chrX:378160-378260 5.8e-09 45_[-2]_34 chrV:469221-469763 5.8e-09 14_[-2]_65 chrXII:687639-688228 5.8e-09 28_[+2]_51 chrVII:412100-412596 5.8e-09 48_[+2]_31 chrV:438375-438980 5.8e-09 72_[-2]_7 chrXIII:372202-372762 5.8e-09 65_[+2]_14 chrIV:1305281-1305951 6.8e-09 63_[-2]_16 chrIV:437522-438058 6.8e-09 31_[-2]_48 chrVIII:132813-133363 6.8e-09 48_[+2]_31 chrX:523783-523883 6.8e-09 72_[+2]_7 chrI:182352-182787 6.8e-09 63_[+2]_16 chrIV:1150220-1151721 1e-08 [+2]_79 chrIII:227643-228277 1e-08 31_[-2]_48 chrVI:191311-191831 1e-08 71_[+2]_8 chrXIV:96015-96637 1.7e-08 15_[+2]_64 chrVII:779365-779909 1.7e-08 28_[-2]_51 chrX:617699-617799 2e-08 16_[-2]_63 chrIX:174810-175304 2.2e-08 23_[-2]_56 chrXV:353884-354302 2.2e-08 49_[+2]_30 chrXIV:560502-561015 2.2e-08 36_[+2]_43 chrIV:433996-434578 2.2e-08 78_[+2]_1 chrII:266137-266652 2.2e-08 33_[-2]_46 chrIV:802536-803026 3.2e-08 50_[+2]_29 chrIV:645004-645415 3.2e-08 44_[+2]_35 chrXII:448403-448971 3.2e-08 63_[+2]_16 chrIII:168096-168599 3.2e-08 54_[+2]_25 chrXVI:775534-776091 3.6e-08 53_[+2]_26 chrX:396531-396631 4e-08 37_[+2]_42 chrIV:83302-83835 4e-08 29_[-2]_50 chrX:531422-531522 4e-08 73_[-2]_6 chrVII:930755-931236 4e-08 57_[+2]_22 chrXV:281759-282532 4e-08 68_[-2]_11 chrVII:185477-186097 8.6e-08 28_[+2]_51 chrIV:1201483-1202064 8.6e-08 26_[-2]_53 chrIX:299997-300546 8.6e-08 58_[+2]_21 chrV:135180-135715 8.6e-08 79_[+2] chrVII:122047-122498 8.6e-08 46_[-2]_33 chrVII:1003980-1004405 1.1e-07 73_[-2]_6 chrIV:1256885-1257316 1.1e-07 8_[+2]_71 chrVII:661517-662051 1.1e-07 14_[-2]_65 chrVIII:466730-467307 1.1e-07 21_[-2]_58 chrXIII:747744-748165 1.3e-07 38_[+2]_41 chrIV:568521-569196 1.3e-07 73_[-2]_6 chrXI:162271-162770 1.3e-07 67_[+2]_12 chrIV:488513-489221 1.6e-07 32_[+2]_47 chrII:326549-327167 1.6e-07 36_[+2]_43 chrXIV:631688-632140 1.7e-07 32_[+2]_47 chrXV:228078-228621 2.1e-07 31_[-2]_48 chrXIV:632392-632881 2.1e-07 12_[-2]_67 chrXIV:102488-102983 2.1e-07 30_[-2]_49 chrXII:489292-489576 5.1e-07 34_[-2]_45 chrV:434376-434768 5.5e-07 69_[+2]_10 chrVII:110430-110928 5.5e-07 46_[+2]_33 chrVIII:62536-62997 5.5e-07 38_[-2]_41 chrVIII:237678-238143 7.6e-07 58_[+2]_21 chrXVI:559982-560525 7.6e-07 65_[+2]_14 chrXIII:351977-352529 7.6e-07 76_[-2]_3 chrVIII:358305-358805 7.6e-07 43_[+2]_36 chrXVI:622287-622907 7.6e-07 63_[+2]_16 chrX:422602-422702 1.1e-06 2_[-2]_77 chrIV:1175568-1176169 1.1e-06 10_[-2]_69 chrX:690527-690627 1.3e-06 48_[+2]_31 chrXV:438384-438986 1.5e-06 7_[-2]_72 chrIV:359339-359899 1.5e-06 7_[-2]_72 chrXI:83949-84443 1.7e-06 61_[-2]_18 chrII:9343-9912 1.7e-06 5_[-2]_74 chrV:99897-100359 2.1e-06 54_[-2]_25 chrXV:709992-710509 2.1e-06 [-2]_79 chrXVI:338676-339157 2.1e-06 32_[+2]_47 chrX:545431-545531 2.5e-06 1_[+2]_78 chrV:492172-492581 2.8e-06 77_[+2]_2 chrIV:619678-620404 2.8e-06 29_[+2]_50 chrVI:167251-167714 4.7e-06 4_[-2]_75 chrXIII:168561-169074 4.7e-06 27_[-2]_52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRSRCCAMRNRVSC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAMCCACTRSRCCAMRNRVSC width=21 seqs=95 chrXIII:768185-768669 ( 44) TACCGACTACGCCACACGCCC 1 chrXVI:856442-857337 ( 63) TACCGACTACGCCACACGCCC 1 chrVI:204770-205209 ( 37) TACCGACTACGCCACACGCCC 1 chrXI:219588-220151 ( 76) TACCGACTACGCCACACGCCC 1 chrXI:517735-518316 ( 13) TACCGACTACGCCACACGCCC 1 chrV:442985-443523 ( 51) AACCAACTGGGCCAAGAGACC 1 chrXII:1051875-1052389 ( 42) AACCAACTGGGCCAAGAGACC 1 chrXIV:602093-602595 ( 18) AACCAACTGGGCCAAGAGACC 1 chrVII:794150-794710 ( 37) TACCAACTGCGCCATGTGCCC 1 chrXII:214658-215166 ( 73) TACCAACTGCGCCATGTGCCC 1 chrI:165999-166606 ( 15) TACCAACTGCGCCATGTGCCC 1 chrI:138927-139400 ( 39) ATACCACTAGACCACACGCCC 1 chrXV:300837-301430 ( 14) ATACCACTAGACCACACGCCC 1 chrXIII:195901-196441 ( 29) ATACCACTAGACCACACGCCC 1 chrVI:101144-101607 ( 51) ATACCACTAGACCACACGCCC 1 chrXII:92319-92870 ( 4) ATACCACTAGACCACACGCCC 1 chrXV:464229-464680 ( 46) ATACCACTAGACCACACGCCC 1 chrXI:46482-47030 ( 80) TTACCACTTGGCCAAAAGGGC 1 chrXIII:586459-586909 ( 55) AACCGACTAGACCACGAAACC 1 chrVII:73667-74152 ( 23) AACCGACTAGACCACGAAACC 1 chrVII:823254-823705 ( 53) AACCGACTAGACCACGAAACC 1 chrX:378160-378260 ( 46) AACCGACTAGACCACGAAACC 1 chrV:469221-469763 ( 15) AACCGACTAGACCACGAAACC 1 chrXII:687639-688228 ( 29) AACCGACTAGACCACGAAACC 1 chrVII:412100-412596 ( 49) AACCGACTAGACCACGAAACC 1 chrV:438375-438980 ( 73) AACCGACTAGACCACGAAACC 1 chrXIII:372202-372762 ( 66) AACCGACTAGACCACGAAACC 1 chrIV:1305281-1305951 ( 64) TAACCACTCGGCCAAGTTGCC 1 chrIV:437522-438058 ( 32) TAACCACTCGGCCAAGTTGCC 1 chrVIII:132813-133363 ( 49) TAACCACTCGGCCAAGTTGCC 1 chrX:523783-523883 ( 73) TAACCACTCGGCCAAGTTGCC 1 chrI:182352-182787 ( 64) TAACCACTCGGCCAAGTTGCC 1 chrIV:1150220-1151721 ( 1) TAACCACTCGGCCACTGGGAC 1 chrIII:227643-228277 ( 32) TAACCACTCGGCCATAGTGCC 1 chrVI:191311-191831 ( 72) TAACCACTCGGCCACTGGGAC 1 chrXIV:96015-96637 ( 16) TAACCACTACACTAACCGCCC 1 chrVII:779365-779909 ( 29) TAACCACTACACTAACCGCCC 1 chrX:617699-617799 ( 17) AAACCACTCGGCCAAACTCCC 1 chrIX:174810-175304 ( 24) TACCAACTTGGCCATAGAAGC 1 chrXV:353884-354302 ( 50) TACCAACTTGGCCATAGAAGC 1 chrXIV:560502-561015 ( 37) TACCAACTTGGCCATAGAAGC 1 chrIV:433996-434578 ( 79) TACCAACTTGGCCATAGAAGC 1 chrII:266137-266652 ( 34) TACCAACTTGGCCATAGAAGC 1 chrIV:802536-803026 ( 51) TAACCACTACACTATAGGACC 1 chrIV:645004-645415 ( 45) TAACCACTACACTATAGGACC 1 chrXII:448403-448971 ( 64) TAACCACTACACTATAGGACC 1 chrIII:168096-168599 ( 55) TAACCACTACACTATAGGACC 1 chrXVI:775534-776091 ( 54) CTACCACTGCGCCATACGAGC 1 chrX:396531-396631 ( 38) TTACCACTAAACCACTTGCGC 1 chrIV:83302-83835 ( 30) TTACCACTAAACCACTTGCGC 1 chrX:531422-531522 ( 74) TTACCACTAAACCACTTGCGC 1 chrVII:930755-931236 ( 58) TTACCACTAAACCACTTGCGC 1 chrXV:281759-282532 ( 69) TTACCACTAAACCACTTGCGC 1 chrVII:185477-186097 ( 29) TACCGATTGCGCCAACAAGGC 1 chrIV:1201483-1202064 ( 27) TACCGATTGCGCCAACAAGGC 1 chrIX:299997-300546 ( 59) TACCGATTGCGCCAACAAGGC 1 chrV:135180-135715 ( 80) TACCGATTGCGCCAACAAGGC 1 chrVII:122047-122498 ( 47) TACCGATTGCGCCAACAAGGC 1 chrVII:1003980-1004405 ( 74) CTACCACTAAGCTAAGGAGGC 1 chrIV:1256885-1257316 ( 9) TAACCACTGAACCACTTTCGC 1 chrVII:661517-662051 ( 15) CTACCACTAAGCTAAGGAGGC 1 chrVIII:466730-467307 ( 22) CTACCACTAAGCTAAGGAGGC 1 chrXIII:747744-748165 ( 39) TTGCCATTACGCCACGCGAGC 1 chrIV:568521-569196 ( 74) TTGCCATTACGCCACGCGAGC 1 chrXI:162271-162770 ( 68) TTGCCATTACGCCACGCGAGC 1 chrIV:488513-489221 ( 33) GAACCACTGGACCATTGGACC 1 chrII:326549-327167 ( 37) GAACCACTGGACCATTGGACC 1 chrXIV:631688-632140 ( 33) ATACCTCTAGACCACACGCCC 1 chrXV:228078-228621 ( 32) AACCAACTTGGCCATGGAGTC 1 chrXIV:632392-632881 ( 13) AACCAACTTGGCCATGGAGTC 1 chrXIV:102488-102983 ( 31) AACCAACTTGGCCATGGAGTC 1 chrXII:489292-489576 ( 35) CACCCACTACACTACTCGGTC 1 chrV:434376-434768 ( 70) TAACCACTATACTAAGATGGC 1 chrVII:110430-110928 ( 47) TAACCACTATACTAAGATGGC 1 chrVIII:62536-62997 ( 39) TAACCACTATACTAAGATGGC 1 chrVIII:237678-238143 ( 59) TCCCAACTGAGCTAAATCCGC 1 chrXVI:559982-560525 ( 66) TCCCAACTGAGCTAAATCCGC 1 chrXIII:351977-352529 ( 77) TCCCAACTGAGCTAAATCCGC 1 chrVIII:358305-358805 ( 44) TCCCAACTGAGCTAAATCCGC 1 chrXVI:622287-622907 ( 64) TCCCAACTGAGCTAAATCCGC 1 chrX:422602-422702 ( 3) TTCCTACTGAGCTACTGAAGC 1 chrIV:1175568-1176169 ( 11) TTCCTACTGAGCTACTGAAGC 1 chrX:690527-690627 ( 49) ACCCAACTTTACCACCAGGGC 1 chrXV:438384-438986 ( 8) TACCAACTGAGCTAACAAGGA 1 chrIV:359339-359899 ( 8) TACCAACTGAGCTAACAAGGA 1 chrXI:83949-84443 ( 62) AGACCACTCGGCCAACCCTCC 1 chrII:9343-9912 ( 6) AGACCACTCGGCCAACCCTCC 1 chrV:99897-100359 ( 55) CTTCCACTGCGCCACGGCGCT 1 chrXV:709992-710509 ( 1) CTTCCACTGCGCCACGGCGCT 1 chrXVI:338676-339157 ( 33) CTTCCACTGCGCCACGGCGCT 1 chrX:545431-545531 ( 2) TAACCTCTTGGGCAAAGGCGC 1 chrV:492172-492581 ( 78) TGACCATTGGGCCACGAGGAA 1 chrIV:619678-620404 ( 30) TGACCATTGGGCCACGAGGAA 1 chrVI:167251-167714 ( 5) AACCAACTTGGCTACCGAGAG 1 chrXIII:168561-169074 ( 28) AACCAACTTGGCTACCGAGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRSRCCAMRNRVSC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 9.41524 E= 2.8e-223 -8 -116 -316 95 102 -158 -216 -24 54 136 -258 -330 -1321 241 -1321 -1321 -30 148 9 -389 165 -1321 -1321 -389 -1321 225 -1321 -156 -1321 -1321 -1321 168 51 -70 70 -119 -72 59 136 -289 24 -1321 174 -1321 -1321 239 -416 -1321 -1321 199 -1321 -30 168 -1321 -1321 -1321 16 126 -1321 -64 7 -36 105 -119 -19 30 64 -64 7 -84 126 -143 -3 74 92 -389 -230 139 109 -289 -289 226 -316 -330 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRSRCCAMRNRVSC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 95 E= 2.8e-223 0.294737 0.084211 0.021053 0.600000 0.631579 0.063158 0.042105 0.263158 0.452632 0.484211 0.031579 0.031579 0.000000 1.000000 0.000000 0.000000 0.252632 0.526316 0.200000 0.021053 0.978947 0.000000 0.000000 0.021053 0.000000 0.894737 0.000000 0.105263 0.000000 0.000000 0.000000 1.000000 0.442105 0.115789 0.305263 0.136842 0.189474 0.284211 0.484211 0.042105 0.368421 0.000000 0.631579 0.000000 0.000000 0.989474 0.010526 0.000000 0.000000 0.747368 0.000000 0.252632 1.000000 0.000000 0.000000 0.000000 0.347368 0.452632 0.000000 0.200000 0.326316 0.147368 0.389474 0.136842 0.273684 0.231579 0.294737 0.200000 0.326316 0.105263 0.452632 0.115789 0.305263 0.315789 0.357895 0.021053 0.063158 0.494737 0.400000 0.042105 0.042105 0.905263 0.021053 0.031579 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAMCCACTRSRCCAMRNRVSC MEME-2 regular expression -------------------------------------------------------------------------------- [TA][AT][CA]C[CAG]ACT[AG][GC][GA]C[CT]A[CAT][GA][GACT][GA][GCA][CG]C -------------------------------------------------------------------------------- Time 664.88 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTTYTTTTTYTTTY MEME-3 width = 15 sites = 130 llr = 1286 E-value = 7.0e-085 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTTYTTTTTYTTTY MEME-3 Description -------------------------------------------------------------------------------- Simplified A :1:::111:::21:: pos.-specific C 11:14::2:232134 probability G 2::1::::::::2:1 matrix T 88a86997a865676 bits 2.4 2.2 1.9 1.7 * Relative 1.4 * * Entropy 1.2 * ** ** (14.3 bits) 1.0 ******* ** * 0.7 *********** ** 0.5 *********** *** 0.2 *************** 0.0 --------------- Multilevel TTTTTTTTTTTTTTT consensus C C CA CC sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTYTTTTTYTTTY MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chrX:160002-160102 + 59 2.50e-08 ATTGCTCCTT TTTTCTTTTTTTTTT GCTTTTTTTT chrIII:127514-128041 + 73 2.50e-08 TTAATTTTTC TTTTCTTTTTTTTTT TTTATCTCCG chrXVI:452875-454064 - 44 2.50e-08 TAAGCCATCT TTTTCTTTTTTTTTC TTTCTTCTTA chrVIII:455505-456244 - 27 2.50e-08 AAAAAGAAAG TTTTCTTTTTTTTTT ACATGGGAAC chrIV:525090-525385 + 65 2.50e-08 TTTTCGGCGC TTTTCTTTTTTTTTT TCTTTTTTTT chrXV:882112-883108 + 59 2.50e-08 CGTCGTTTCT TTTTCTTTTTTTTTT TTTTTTTTTT chrI:92352-92799 + 73 2.50e-08 TTTTTCAGTC TTTTCTTTTTTTTTT TTCGCATTAG chrXII:48551-49127 - 81 2.50e-08 TCTTT TTTTCTTTTTTTTTT TTTTTTTTTT chrIII:228440-229473 + 59 6.64e-08 TATTTTTCCG TTTTTTTTTTTTTTC GGAACAAAGA chrVIII:475200-475929 - 36 6.64e-08 CTTTGTATCA TTTTTTTTTTTTTTT GGTGATGCGA chrV:304645-306930 + 63 6.64e-08 CCTTCTTTAC TTTTTTTTTTTTTTT TGGTGATATT chrVII:400470-400707 + 13 6.64e-08 AACCTTTTAG TTTTTTTTTTTTTTT TTTTTTATTT chrVIII:292513-294113 - 10 6.64e-08 TTTTTTTTTT TTTTTTTTTTTTTTT ACCTCTAAA chrV:152087-153534 + 42 1.21e-07 TTTTAATTCA TTTTCTTTTTTCTTC ATTTCTTTCT chrII:392095-394458 + 46 1.21e-07 CTCTTCATTC TTTTCTTTTTTCTTT GTCGATTACT chrVIII:85007-85581 - 26 1.46e-07 TTTTTTGAAT TTTTTTTTTTTCTTT AGAAAAATGT chrXII:704282-704651 + 36 1.46e-07 TTTTTTTTCA TTTTTTTTTTTCTTT TCTCCTCCAT chrII:372661-374325 + 14 2.75e-07 AAGAAAGGTT TTTTTTTCTTTTTTT CCCTACCTGG chrXVI:280639-282962 + 41 3.58e-07 CTTTGATTAC TTTTTTTTTTCTTCT CTCAGTTTGT chrI:180949-181517 + 77 5.22e-07 AACCATTATT TTTTCTTTTTCCTCC TATACTTCA chrII:36152-36918 + 23 6.40e-07 GCTAGCATTC TTTTTTTTTTCATTT CTAGGCCTGT chrII:798557-799469 - 39 7.38e-07 CGATAGACCT TTTTTTTCTTTTTCT GCTTTTTCGT chrII:374609-377231 + 5 7.38e-07 AAAT TTTTTTTCTTTTTCT CGCTGAAGAG chrXIII:914366-915982 - 24 9.82e-07 ATCGCAAGGG TTTTTTTCTTTTGTC TTATTCGAGT chrIII:82101-82813 - 40 1.13e-06 CGTATCGGAG TTTTTTTTTTCTGCT ATTACAATTA chrXVI:641210-642130 - 4 1.13e-06 TGTAGAAGAC TTTTTTTTTTCTGCC TTC chrXI:340548-341560 - 19 1.32e-06 TTTTTCCAGT TTTTTTTTTTCATCC ATTTACTTTA chrIX:394742-395046 - 9 1.32e-06 CAAATTAAGG TTTTTTTCTTCTGTT TTCTTAAC chrXII:489292-489576 + 83 1.51e-06 GGTGCTGCAA TCTTTTTTTTTTTTC CGC chrIV:1016930-1017549 - 4 1.71e-06 CCGCTTCGGA GTTTCTTTTTTATTT TCT chrXVI:297007-297568 - 84 1.99e-06 GC TTTTTTTTTCCTTCT CCATGGCTAA chrIX:183068-183725 - 51 1.99e-06 TGGAAGTCAA TTTTTTTTTCCTTCT GAATCAGTAA chrXV:285580-285924 + 39 2.26e-06 TGGTAAAATC TTTTCTTTTTTTCCT TTTCCGCCAT chrXVI:819270-819978 + 84 2.58e-06 GGACTTACTA TTTTCTATTTTTTTT TT chrX:422602-422702 + 78 2.58e-06 CTGGAGCACA TTTTCTTTTTTTGTG AATTAAAC chrXII:514660-515320 + 21 2.58e-06 CACACGAATA CTTTCTTTTTTTTTT TTCACAGGAA chrIV:591034-592225 + 19 2.99e-06 CATTTTTCCT TTTTCTTATTTTTTT TACTTTCCTA chrXII:589018-589439 - 43 3.36e-06 TTTTAATCAC TTTTCTTTTTTTACT GAACAGTGAA chrVII:608970-610464 - 52 3.36e-06 TTTTAGTTCC TTTTTTTTTTCTCCC TCGGTCTGTT chrXVI:121371-121781 - 62 3.36e-06 ACCTTGAAAC TTTTCTTTTTCCATT GAAAAATTAG chrXV:571530-572189 + 82 3.36e-06 TGCTGCAACA TTTTTTTATTTTTTC AAAT chrXV:976161-977346 + 79 3.36e-06 AAAATTGATT TTTTTTTATTTTTTC GGTTTTG chrXII:924405-925196 - 34 3.36e-06 GTAGGCGCGT TTTGTTTCTTTTTCC TACCGCAGAC chrVII:228467-228836 - 60 3.85e-06 TTGGTGTCGT TCTTCTTTTTTATTT TGTAAGACTG chrIV:464971-465834 + 67 3.85e-06 TTTAAATCCG TTTTCTATTTTCTTT AGGTCTTTCC chrIV:358064-358467 + 63 3.85e-06 CACCAAGGTA TTTTTTTTTTTACTT GGCAGATCTG chrXIII:852010-852394 + 45 4.36e-06 TCAGCTTCTC TTTGTTTTTCCTTTT TTGGCACCTC chrIX:254224-254578 + 83 4.36e-06 GTACCACCAC GTTTCTTTTTCATCT CTT chrXII:369113-371900 + 30 4.36e-06 GATTGGCTTT TATTTTTTTTTTTTT GGTGGCGTTT chrII:642694-643245 - 76 4.89e-06 CTGAGTGCGA GCTTCTTTTTTTTTT TGCAATCCTT chrXI:578784-579366 - 72 4.89e-06 TTGAAACTTA TTTTCATTTTTTTTC TTTAGCATTG chrXIII:20-196 - 56 4.89e-06 CAGGGTTTCA TTTTCATTTTTTTTT TTTAATTTCG chrXII:5-266 - 51 4.89e-06 CAGGGTTTCA TTTTCATTTTTTTTT TAATTTCGGT chrIII:177068-178857 + 58 5.57e-06 TATCCAAAAG TTTTTTTTTTTAATT CTTACATAGT chrXII:1028141-1028612 + 13 6.14e-06 TCCTACCTTT TTTCCTTCTTTCTTC CTTGTCTTAA chrV:434376-434768 - 4 6.14e-06 GGAGATGGCA TTTTCTTTTTTACCT GTC chrVIII:488193-488622 - 15 6.14e-06 TTTTGTTAGG TCTGTTTTTTTTTTT GAAAATTTTT chrXIV:62286-64760 - 56 6.14e-06 ACCTTACAAT TTTTCTTCTTTGTTC CTTTTTCCTT chrXI:517084-517563 + 4 6.89e-06 GGA GTTCCTTTTTTTTTC CGCCACTCCG chrVII:535452-535853 + 58 6.89e-06 TATTACGTTA TTTTTATTTTCTTTT ACTGTTTTCT chrIV:385902-387601 + 49 6.89e-06 AGTTTAAAGT TTTTTTTTTCCAGTT CTTTTTTCCC chrV:225229-225731 + 26 7.79e-06 CCCCCTCACC TTTCTTTTTTCATTC GTTTAAAGTG chrXIV:725816-726415 - 49 7.79e-06 CTTCAGTATT TTTTTTTATTTTGTC GGGGCCACCA chrI:141452-143688 + 78 8.55e-06 AGCAAAATGT TTTGTTTCTCCTTTT AAAATAGT chrXIII:408358-409094 + 77 1.06e-05 ATTGCCGGTT TTTTCGTTTTTCTTC TTGATTTTC chrIV:721380-722146 - 13 1.06e-05 TTTTCTGGTG TTTGTTATTTTTTTT TCCTTGTACT chrVIII:237678-238143 + 36 1.16e-05 CTTGACCGAA GTTTTTTCTTCAGTC TGGCGCTCTC chrXVI:559982-560525 + 43 1.16e-05 CTTGACCGAA GTTTTTTCTTCAGTC TGGCGCTCTC chrIV:1095088-1095727 + 61 1.16e-05 CTTGACCAAA GTTTTTTCTTCAGTC TGGCGCTCTC chrVIII:358305-358805 + 21 1.16e-05 CTTGACCGAA GTTTTTTCTTCAGTC TGGCGCTCTC chrXVI:622287-622907 + 41 1.16e-05 CTTGACCGAA GTTTTTTCTTCAGTC TGGCGCTCTC chrVI:157682-158216 + 65 1.16e-05 CTTGACCGAA GTTTTTTCTTCAGTC TGGCGCTCTC chrXIII:731418-733533 - 4 1.29e-05 ATTGGTGAAT TTTGTTTCTTTCTTG CTT chrIV:368815-369229 - 21 1.29e-05 ACATTTGCGT TATTTTTTTTCCTCC GGCTGCTTTT chrVII:807773-808093 - 9 1.42e-05 CTTTTTTTTC GTTTCTTTTTTCACT CCATTTCT chrXII:329271-329650 - 61 1.42e-05 AGACGGCATT TTTTCGTCTTTTTTT ATCCGGTTTT chrXIII:320943-321343 - 39 1.42e-05 GACTCGTCCA TTTTTTATTTTTTTG GCTAACTAAC chrVIII:384338-385536 - 58 1.42e-05 TGTTCACAGT TCTCTTTTTTTTTTT CAGAATACAT chrXIV:417493-418205 + 60 1.42e-05 ACTTGGCTAA TTTTTTTATCCTTTC TTCATGTTTT chrIII:292345-293054 - 70 1.56e-05 TAAATAAAAC GTTTCTACTTTTTTT CAAGGTTGAT chrVIII:103867-104320 + 59 1.56e-05 GTAAAACTTT CTTGCTTTTTTTTCT TGAGACTCCC chrXIV:498932-499100 + 70 1.72e-05 CGAAGGAAGT TTTTTTTCTTTATGT TTAGCTCTTT chrXIII:797910-798671 + 18 1.87e-05 ATTCTTCATC TTTGTTTTTTTATCG TGGAAAAGGA chrVII:648814-649424 - 14 2.06e-05 CACCGCCTTC TTTTTATTTTTATCC GAAGATCTTT chrXV:1003520-1004923 + 86 2.06e-05 GGTGCAAGGG TGTTTTTTTTTTTTT chrXIV:632392-632881 + 86 2.06e-05 CACTGGGGTC GTTTTTTTTCTTATT chrXVI:770511-771878 - 13 2.06e-05 ATTATATTTT GATTTTTTTTCCTTT CTAAATTTTT chrXI:313101-313690 - 39 2.25e-05 AGATGGCATT TTATTTTTTTCCTTT AGCCTTCATG chrIII:142186-142997 - 38 2.25e-05 GTTATGAAAA TTTTCTACTCTCTTT CACATTTTTT chrIV:667724-668253 - 54 2.46e-05 CTAGAGACCA TTTTTATTTTTTCTC CTCTATTGTT chrX:374190-374290 - 47 2.93e-05 TCGTGAGTGC TTTGTTTCTTCCGTG ATAGTTTAAT chrX:355107-355207 + 70 2.93e-05 TCGTGAGTGC TTTGTTTCTTCCGTG ATAGTTTAAT chrVI:226412-226946 - 42 2.93e-05 ACAGGGCTTA TCTCTTTTTTTCTCT AACAAAAAAA chrIV:1329945-1330990 + 39 3.48e-05 GTCTTTCAAT TTTTTTTATTTCCCT GCACCAAACT chrIV:322174-323618 - 37 3.48e-05 GTTCTTGGCG TCTTCTTCTTCGTTT CTCTTTCTGG chrXII:214658-215166 - 2 3.48e-05 CGTCCATTTA TTTTTTACTTTTATT C chrXII:784114-784822 + 38 3.76e-05 CTGTGACGCT TTTTTTAATTTCTTT ACTCCATGAC chrX:705135-705235 + 49 3.76e-05 ACTTAATTTA GCTTCTTTTCCCTCT CTGACACCTC chrX:542700-542800 - 9 4.10e-05 GGGAGATTTT TTTGTTTTTTATGTC TCCATTCA chrIV:550689-551374 - 51 4.10e-05 GGATGCGTGC TTTTTTTTTCCGGCC GACACATATC chrVIII:125867-127812 - 70 4.10e-05 GGTGGCTATT GATGCTTTTTTCTTT TAAATTACAA chrX:414750-414850 + 70 4.10e-05 ACAGGGCTAA TATTTTTTTCTTGCC CACTTATTCA chrXI:158189-159635 - 49 4.10e-05 TGTTAGTAAA CTTCCTTTTTTCTCC TCATCTCGGT chrX:233707-233807 + 9 4.43e-05 TACTGGTC GTTGCTTTTTCAATC ACCGTGTCAC chrVII:773941-774660 + 64 4.43e-05 TTTACTTCAT TATTCTTCTCTATTC TCCCCTTTCA chrXI:74444-74999 - 46 4.43e-05 TTAGAATTGA TTTGTTTCTTCAGTG TAAAAAAGTT chrXV:618739-624672 + 85 4.43e-05 AATGGTGGTG TATTCTTTTTCTACT T chrXIV:229426-230799 - 10 4.78e-05 AATGGAACAT TTTTCTATTTATTTC TTTCTTAAA chrXVI:842900-843141 - 47 5.19e-05 TGGGAAATGA TTTTTTTTTCCACTG CTTTTGAGAA chrXIII:747744-748165 + 66 5.58e-05 GAGCTAGTCA TATGTTTCTTTCGTC TTTTTCATCT chrXIV:715445-716651 + 73 5.58e-05 TGCAATCTCA CTTGTTTTTTCCTTG ATTTTACTTT chrXI:355293-356470 - 27 5.58e-05 CGTTATTGTG GCTGCTTTTTTAGTC TTCGAAAGAG chrXII:628160-628990 + 45 6.02e-05 ACGTGCAGCA TCTTTTTTTCCTACC ATTGAATATA chrVIII:147645-149568 + 14 6.02e-05 TTATTTTAGG CTTTTTTCTTCTACT AGAATTTCAT chrVII:878086-879370 - 4 6.02e-05 TATTATTTAA TTTTTTTTTTTTCGG AAA chrXIII:290585-291180 + 66 6.95e-05 AATTTGAAAA TTTTTTTCTTCACGT CGACCAAGGT chrXII:709712-711452 - 53 7.50e-05 ATGTTTGGTG TTTGTTTATTTGTTT ATGTGTTTCA chrVI:101144-101607 + 20 8.03e-05 TATAAATATT TCTGTTTTTCTTATT AACGCAACAA chrXVI:502457-503233 - 11 9.23e-05 ACCACGCGGT GTTTCTTTTCTAGGC ATCAAGTGGC chrVII:23259-23698 + 84 9.85e-05 AGAAAAGAGA TTTCTTTTTCTCGCG GG chrII:555457-558503 - 26 9.85e-05 AACAAGAATG TTTTTAATTTCCGTT GGTGTCACTA chrXI:46482-47030 - 7 1.05e-04 GCATTTGAAA TTTTATTTTCTATTT TTTAAT chrVII:371138-371555 - 42 1.05e-04 ATGGGTGCCG GTATTTTTTTTAGTT CGCTCTGCGC chrXIV:546947-547403 + 73 1.05e-04 GCTCGCCCCG TTATCTTTTTTCACC ATCAGGGCGG chrVIII:17016-18130 - 27 1.20e-04 GAACAGCGGA GTTTTTATTTTATGC CCGCAAAAAA chrIII:227643-228277 - 66 1.28e-04 GATAGCCGAA CTTTTTATTCCATTC GAGTCTCTCG chrVII:541606-542197 + 72 1.28e-04 GTATCGGAGT GTTCTTTTTCTTACC TCTTGAAAAA chrXIII:347063-347410 - 46 1.36e-04 CGGAGTTGAT CTTTCGTCTTTCTCC GGAAACCACG chrXI:490711-491355 + 77 1.45e-04 ACTTTTATAA TTTTCTTATTATCTT TTCAGTTAT chrXII:645202-646354 + 67 1.45e-04 TCCCTTTCCC TCTTCTTCTTATCTC AACAACCGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTYTTTTTYTTTY MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:160002-160102 2.5e-08 58_[+3]_27 chrIII:127514-128041 2.5e-08 72_[+3]_13 chrXVI:452875-454064 2.5e-08 43_[-3]_42 chrVIII:455505-456244 2.5e-08 26_[-3]_59 chrIV:525090-525385 2.5e-08 64_[+3]_21 chrXV:882112-883108 2.5e-08 58_[+3]_27 chrI:92352-92799 2.5e-08 72_[+3]_13 chrXII:48551-49127 2.5e-08 80_[-3]_5 chrIII:228440-229473 6.6e-08 58_[+3]_27 chrVIII:475200-475929 6.6e-08 35_[-3]_50 chrV:304645-306930 6.6e-08 62_[+3]_23 chrVII:400470-400707 6.6e-08 12_[+3]_73 chrVIII:292513-294113 6.6e-08 9_[-3]_76 chrV:152087-153534 1.2e-07 41_[+3]_44 chrII:392095-394458 1.2e-07 45_[+3]_40 chrVIII:85007-85581 1.5e-07 25_[-3]_60 chrXII:704282-704651 1.5e-07 35_[+3]_50 chrII:372661-374325 2.7e-07 13_[+3]_72 chrXVI:280639-282962 3.6e-07 40_[+3]_45 chrI:180949-181517 5.2e-07 76_[+3]_9 chrII:36152-36918 6.4e-07 22_[+3]_63 chrII:798557-799469 7.4e-07 38_[-3]_47 chrII:374609-377231 7.4e-07 4_[+3]_81 chrXIII:914366-915982 9.8e-07 23_[-3]_62 chrIII:82101-82813 1.1e-06 39_[-3]_46 chrXVI:641210-642130 1.1e-06 3_[-3]_82 chrXI:340548-341560 1.3e-06 18_[-3]_67 chrIX:394742-395046 1.3e-06 8_[-3]_77 chrXII:489292-489576 1.5e-06 82_[+3]_3 chrIV:1016930-1017549 1.7e-06 3_[-3]_82 chrXVI:297007-297568 2e-06 83_[-3]_2 chrIX:183068-183725 2e-06 50_[-3]_35 chrXV:285580-285924 2.3e-06 38_[+3]_47 chrXVI:819270-819978 2.6e-06 83_[+3]_2 chrX:422602-422702 2.6e-06 77_[+3]_8 chrXII:514660-515320 2.6e-06 20_[+3]_65 chrIV:591034-592225 3e-06 18_[+3]_67 chrXII:589018-589439 3.4e-06 42_[-3]_43 chrVII:608970-610464 3.4e-06 51_[-3]_34 chrXVI:121371-121781 3.4e-06 61_[-3]_24 chrXV:571530-572189 3.4e-06 81_[+3]_4 chrXV:976161-977346 3.4e-06 78_[+3]_7 chrXII:924405-925196 3.4e-06 33_[-3]_52 chrVII:228467-228836 3.8e-06 59_[-3]_26 chrIV:464971-465834 3.8e-06 66_[+3]_19 chrIV:358064-358467 3.8e-06 62_[+3]_23 chrXIII:852010-852394 4.4e-06 44_[+3]_41 chrIX:254224-254578 4.4e-06 82_[+3]_3 chrXII:369113-371900 4.4e-06 29_[+3]_56 chrII:642694-643245 4.9e-06 75_[-3]_10 chrXI:578784-579366 4.9e-06 71_[-3]_14 chrXIII:20-196 4.9e-06 55_[-3]_30 chrXII:5-266 4.9e-06 50_[-3]_35 chrIII:177068-178857 5.6e-06 57_[+3]_28 chrXII:1028141-1028612 6.1e-06 12_[+3]_73 chrV:434376-434768 6.1e-06 3_[-3]_82 chrVIII:488193-488622 6.1e-06 14_[-3]_71 chrXIV:62286-64760 6.1e-06 55_[-3]_30 chrXI:517084-517563 6.9e-06 3_[+3]_82 chrVII:535452-535853 6.9e-06 57_[+3]_28 chrIV:385902-387601 6.9e-06 48_[+3]_37 chrV:225229-225731 7.8e-06 25_[+3]_60 chrXIV:725816-726415 7.8e-06 48_[-3]_37 chrI:141452-143688 8.6e-06 77_[+3]_8 chrXIII:408358-409094 1.1e-05 76_[+3]_9 chrIV:721380-722146 1.1e-05 12_[-3]_73 chrVIII:237678-238143 1.2e-05 35_[+3]_50 chrXVI:559982-560525 1.2e-05 42_[+3]_43 chrIV:1095088-1095727 1.2e-05 60_[+3]_25 chrVIII:358305-358805 1.2e-05 20_[+3]_65 chrXVI:622287-622907 1.2e-05 40_[+3]_45 chrVI:157682-158216 1.2e-05 64_[+3]_21 chrXIII:731418-733533 1.3e-05 3_[-3]_82 chrIV:368815-369229 1.3e-05 20_[-3]_65 chrVII:807773-808093 1.4e-05 8_[-3]_77 chrXII:329271-329650 1.4e-05 60_[-3]_25 chrXIII:320943-321343 1.4e-05 38_[-3]_47 chrVIII:384338-385536 1.4e-05 57_[-3]_28 chrXIV:417493-418205 1.4e-05 59_[+3]_26 chrIII:292345-293054 1.6e-05 69_[-3]_16 chrVIII:103867-104320 1.6e-05 58_[+3]_27 chrXIV:498932-499100 1.7e-05 69_[+3]_16 chrXIII:797910-798671 1.9e-05 17_[+3]_68 chrVII:648814-649424 2.1e-05 13_[-3]_72 chrXV:1003520-1004923 2.1e-05 85_[+3] chrXIV:632392-632881 2.1e-05 85_[+3] chrXVI:770511-771878 2.1e-05 12_[-3]_73 chrXI:313101-313690 2.3e-05 38_[-3]_47 chrIII:142186-142997 2.3e-05 37_[-3]_48 chrIV:667724-668253 2.5e-05 53_[-3]_32 chrX:374190-374290 2.9e-05 46_[-3]_39 chrX:355107-355207 2.9e-05 69_[+3]_16 chrVI:226412-226946 2.9e-05 41_[-3]_44 chrIV:1329945-1330990 3.5e-05 38_[+3]_47 chrIV:322174-323618 3.5e-05 36_[-3]_49 chrXII:214658-215166 3.5e-05 1_[-3]_84 chrXII:784114-784822 3.8e-05 37_[+3]_48 chrX:705135-705235 3.8e-05 48_[+3]_37 chrX:542700-542800 4.1e-05 8_[-3]_77 chrIV:550689-551374 4.1e-05 50_[-3]_35 chrVIII:125867-127812 4.1e-05 69_[-3]_16 chrX:414750-414850 4.1e-05 69_[+3]_16 chrXI:158189-159635 4.1e-05 48_[-3]_37 chrX:233707-233807 4.4e-05 8_[+3]_77 chrVII:773941-774660 4.4e-05 63_[+3]_22 chrXI:74444-74999 4.4e-05 45_[-3]_40 chrXV:618739-624672 4.4e-05 84_[+3]_1 chrXIV:229426-230799 4.8e-05 9_[-3]_76 chrXVI:842900-843141 5.2e-05 46_[-3]_39 chrXIII:747744-748165 5.6e-05 65_[+3]_20 chrXIV:715445-716651 5.6e-05 72_[+3]_13 chrXI:355293-356470 5.6e-05 26_[-3]_59 chrXII:628160-628990 6e-05 44_[+3]_41 chrVIII:147645-149568 6e-05 13_[+3]_72 chrVII:878086-879370 6e-05 3_[-3]_82 chrXIII:290585-291180 7e-05 65_[+3]_20 chrXII:709712-711452 7.5e-05 52_[-3]_33 chrVI:101144-101607 8e-05 19_[+3]_66 chrXVI:502457-503233 9.2e-05 10_[-3]_75 chrVII:23259-23698 9.8e-05 83_[+3]_2 chrII:555457-558503 9.8e-05 25_[-3]_60 chrXI:46482-47030 0.00011 6_[-3]_79 chrVII:371138-371555 0.00011 41_[-3]_44 chrXIV:546947-547403 0.00011 72_[+3]_13 chrVIII:17016-18130 0.00012 26_[-3]_59 chrIII:227643-228277 0.00013 65_[-3]_20 chrVII:541606-542197 0.00013 71_[+3]_14 chrXIII:347063-347410 0.00014 45_[-3]_40 chrXI:490711-491355 0.00015 76_[+3]_9 chrXII:645202-646354 0.00015 66_[+3]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTYTTTTTYTTTY MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTTYTTTTTYTTTY width=15 seqs=130 chrX:160002-160102 ( 59) TTTTCTTTTTTTTTT 1 chrIII:127514-128041 ( 73) TTTTCTTTTTTTTTT 1 chrXVI:452875-454064 ( 44) TTTTCTTTTTTTTTC 1 chrVIII:455505-456244 ( 27) TTTTCTTTTTTTTTT 1 chrIV:525090-525385 ( 65) TTTTCTTTTTTTTTT 1 chrXV:882112-883108 ( 59) TTTTCTTTTTTTTTT 1 chrI:92352-92799 ( 73) TTTTCTTTTTTTTTT 1 chrXII:48551-49127 ( 81) TTTTCTTTTTTTTTT 1 chrIII:228440-229473 ( 59) TTTTTTTTTTTTTTC 1 chrVIII:475200-475929 ( 36) TTTTTTTTTTTTTTT 1 chrV:304645-306930 ( 63) TTTTTTTTTTTTTTT 1 chrVII:400470-400707 ( 13) TTTTTTTTTTTTTTT 1 chrVIII:292513-294113 ( 10) TTTTTTTTTTTTTTT 1 chrV:152087-153534 ( 42) TTTTCTTTTTTCTTC 1 chrII:392095-394458 ( 46) TTTTCTTTTTTCTTT 1 chrVIII:85007-85581 ( 26) TTTTTTTTTTTCTTT 1 chrXII:704282-704651 ( 36) TTTTTTTTTTTCTTT 1 chrII:372661-374325 ( 14) TTTTTTTCTTTTTTT 1 chrXVI:280639-282962 ( 41) TTTTTTTTTTCTTCT 1 chrI:180949-181517 ( 77) TTTTCTTTTTCCTCC 1 chrII:36152-36918 ( 23) TTTTTTTTTTCATTT 1 chrII:798557-799469 ( 39) TTTTTTTCTTTTTCT 1 chrII:374609-377231 ( 5) TTTTTTTCTTTTTCT 1 chrXIII:914366-915982 ( 24) TTTTTTTCTTTTGTC 1 chrIII:82101-82813 ( 40) TTTTTTTTTTCTGCT 1 chrXVI:641210-642130 ( 4) TTTTTTTTTTCTGCC 1 chrXI:340548-341560 ( 19) TTTTTTTTTTCATCC 1 chrIX:394742-395046 ( 9) TTTTTTTCTTCTGTT 1 chrXII:489292-489576 ( 83) TCTTTTTTTTTTTTC 1 chrIV:1016930-1017549 ( 4) GTTTCTTTTTTATTT 1 chrXVI:297007-297568 ( 84) TTTTTTTTTCCTTCT 1 chrIX:183068-183725 ( 51) TTTTTTTTTCCTTCT 1 chrXV:285580-285924 ( 39) TTTTCTTTTTTTCCT 1 chrXVI:819270-819978 ( 84) TTTTCTATTTTTTTT 1 chrX:422602-422702 ( 78) TTTTCTTTTTTTGTG 1 chrXII:514660-515320 ( 21) CTTTCTTTTTTTTTT 1 chrIV:591034-592225 ( 19) TTTTCTTATTTTTTT 1 chrXII:589018-589439 ( 43) TTTTCTTTTTTTACT 1 chrVII:608970-610464 ( 52) TTTTTTTTTTCTCCC 1 chrXVI:121371-121781 ( 62) TTTTCTTTTTCCATT 1 chrXV:571530-572189 ( 82) TTTTTTTATTTTTTC 1 chrXV:976161-977346 ( 79) TTTTTTTATTTTTTC 1 chrXII:924405-925196 ( 34) TTTGTTTCTTTTTCC 1 chrVII:228467-228836 ( 60) TCTTCTTTTTTATTT 1 chrIV:464971-465834 ( 67) TTTTCTATTTTCTTT 1 chrIV:358064-358467 ( 63) TTTTTTTTTTTACTT 1 chrXIII:852010-852394 ( 45) TTTGTTTTTCCTTTT 1 chrIX:254224-254578 ( 83) GTTTCTTTTTCATCT 1 chrXII:369113-371900 ( 30) TATTTTTTTTTTTTT 1 chrII:642694-643245 ( 76) GCTTCTTTTTTTTTT 1 chrXI:578784-579366 ( 72) TTTTCATTTTTTTTC 1 chrXIII:20-196 ( 56) TTTTCATTTTTTTTT 1 chrXII:5-266 ( 51) TTTTCATTTTTTTTT 1 chrIII:177068-178857 ( 58) TTTTTTTTTTTAATT 1 chrXII:1028141-1028612 ( 13) TTTCCTTCTTTCTTC 1 chrV:434376-434768 ( 4) TTTTCTTTTTTACCT 1 chrVIII:488193-488622 ( 15) TCTGTTTTTTTTTTT 1 chrXIV:62286-64760 ( 56) TTTTCTTCTTTGTTC 1 chrXI:517084-517563 ( 4) GTTCCTTTTTTTTTC 1 chrVII:535452-535853 ( 58) TTTTTATTTTCTTTT 1 chrIV:385902-387601 ( 49) TTTTTTTTTCCAGTT 1 chrV:225229-225731 ( 26) TTTCTTTTTTCATTC 1 chrXIV:725816-726415 ( 49) TTTTTTTATTTTGTC 1 chrI:141452-143688 ( 78) TTTGTTTCTCCTTTT 1 chrXIII:408358-409094 ( 77) TTTTCGTTTTTCTTC 1 chrIV:721380-722146 ( 13) TTTGTTATTTTTTTT 1 chrVIII:237678-238143 ( 36) GTTTTTTCTTCAGTC 1 chrXVI:559982-560525 ( 43) GTTTTTTCTTCAGTC 1 chrIV:1095088-1095727 ( 61) GTTTTTTCTTCAGTC 1 chrVIII:358305-358805 ( 21) GTTTTTTCTTCAGTC 1 chrXVI:622287-622907 ( 41) GTTTTTTCTTCAGTC 1 chrVI:157682-158216 ( 65) GTTTTTTCTTCAGTC 1 chrXIII:731418-733533 ( 4) TTTGTTTCTTTCTTG 1 chrIV:368815-369229 ( 21) TATTTTTTTTCCTCC 1 chrVII:807773-808093 ( 9) GTTTCTTTTTTCACT 1 chrXII:329271-329650 ( 61) TTTTCGTCTTTTTTT 1 chrXIII:320943-321343 ( 39) TTTTTTATTTTTTTG 1 chrVIII:384338-385536 ( 58) TCTCTTTTTTTTTTT 1 chrXIV:417493-418205 ( 60) TTTTTTTATCCTTTC 1 chrIII:292345-293054 ( 70) GTTTCTACTTTTTTT 1 chrVIII:103867-104320 ( 59) CTTGCTTTTTTTTCT 1 chrXIV:498932-499100 ( 70) TTTTTTTCTTTATGT 1 chrXIII:797910-798671 ( 18) TTTGTTTTTTTATCG 1 chrVII:648814-649424 ( 14) TTTTTATTTTTATCC 1 chrXV:1003520-1004923 ( 86) TGTTTTTTTTTTTTT 1 chrXIV:632392-632881 ( 86) GTTTTTTTTCTTATT 1 chrXVI:770511-771878 ( 13) GATTTTTTTTCCTTT 1 chrXI:313101-313690 ( 39) TTATTTTTTTCCTTT 1 chrIII:142186-142997 ( 38) TTTTCTACTCTCTTT 1 chrIV:667724-668253 ( 54) TTTTTATTTTTTCTC 1 chrX:374190-374290 ( 47) TTTGTTTCTTCCGTG 1 chrX:355107-355207 ( 70) TTTGTTTCTTCCGTG 1 chrVI:226412-226946 ( 42) TCTCTTTTTTTCTCT 1 chrIV:1329945-1330990 ( 39) TTTTTTTATTTCCCT 1 chrIV:322174-323618 ( 37) TCTTCTTCTTCGTTT 1 chrXII:214658-215166 ( 2) TTTTTTACTTTTATT 1 chrXII:784114-784822 ( 38) TTTTTTAATTTCTTT 1 chrX:705135-705235 ( 49) GCTTCTTTTCCCTCT 1 chrX:542700-542800 ( 9) TTTGTTTTTTATGTC 1 chrIV:550689-551374 ( 51) TTTTTTTTTCCGGCC 1 chrVIII:125867-127812 ( 70) GATGCTTTTTTCTTT 1 chrX:414750-414850 ( 70) TATTTTTTTCTTGCC 1 chrXI:158189-159635 ( 49) CTTCCTTTTTTCTCC 1 chrX:233707-233807 ( 9) GTTGCTTTTTCAATC 1 chrVII:773941-774660 ( 64) TATTCTTCTCTATTC 1 chrXI:74444-74999 ( 46) TTTGTTTCTTCAGTG 1 chrXV:618739-624672 ( 85) TATTCTTTTTCTACT 1 chrXIV:229426-230799 ( 10) TTTTCTATTTATTTC 1 chrXVI:842900-843141 ( 47) TTTTTTTTTCCACTG 1 chrXIII:747744-748165 ( 66) TATGTTTCTTTCGTC 1 chrXIV:715445-716651 ( 73) CTTGTTTTTTCCTTG 1 chrXI:355293-356470 ( 27) GCTGCTTTTTTAGTC 1 chrXII:628160-628990 ( 45) TCTTTTTTTCCTACC 1 chrVIII:147645-149568 ( 14) CTTTTTTCTTCTACT 1 chrVII:878086-879370 ( 4) TTTTTTTTTTTTCGG 1 chrXIII:290585-291180 ( 66) TTTTTTTCTTCACGT 1 chrXII:709712-711452 ( 53) TTTGTTTATTTGTTT 1 chrVI:101144-101607 ( 20) TCTGTTTTTCTTATT 1 chrXVI:502457-503233 ( 11) GTTTCTTTTCTAGGC 1 chrVII:23259-23698 ( 84) TTTCTTTTTCTCGCG 1 chrII:555457-558503 ( 26) TTTTTAATTTCCGTT 1 chrXI:46482-47030 ( 7) TTTTATTTTCTATTT 1 chrVII:371138-371555 ( 42) GTATTTTTTTTAGTT 1 chrXIV:546947-547403 ( 73) TTATCTTTTTTCACC 1 chrVIII:17016-18130 ( 27) GTTTTTATTTTATGC 1 chrIII:227643-228277 ( 66) CTTTTTATTCCATTC 1 chrVII:541606-542197 ( 72) GTTCTTTTTCTTACC 1 chrXIII:347063-347410 ( 46) CTTTCGTCTTTCTCC 1 chrXI:490711-491355 ( 77) TTTTCTTATTATCTT 1 chrXII:645202-646354 ( 67) TCTTCTTCTTATCTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTYTTTTTYTTTY MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 51600 bayes= 9.96434 E= 7.0e-085 -1367 -181 -16 132 -234 -103 -461 143 -375 -1367 -1367 165 -1367 -161 -37 135 -534 103 -1367 96 -253 -1367 -303 157 -175 -1367 -1367 154 -217 34 -1367 115 -1367 -1367 -1367 168 -1367 -29 -1367 144 -334 78 -1367 105 -43 24 -261 73 -164 -116 3 100 -1367 43 -229 118 -1367 91 -116 85 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTYTTTTTYTTTY MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 130 E= 7.0e-085 0.000000 0.053846 0.169231 0.776923 0.061538 0.092308 0.007692 0.838462 0.023077 0.000000 0.000000 0.976923 0.000000 0.061538 0.146154 0.792308 0.007692 0.384615 0.000000 0.607692 0.053846 0.000000 0.023077 0.923077 0.092308 0.000000 0.000000 0.907692 0.069231 0.238462 0.000000 0.692308 0.000000 0.000000 0.000000 1.000000 0.000000 0.153846 0.000000 0.846154 0.030769 0.323077 0.000000 0.646154 0.230769 0.223077 0.030769 0.515385 0.100000 0.084615 0.192308 0.623077 0.000000 0.253846 0.038462 0.707692 0.000000 0.353846 0.084615 0.561538 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTYTTTTTYTTTY MEME-3 regular expression -------------------------------------------------------------------------------- TTTT[TC]TT[TC]TT[TC][TAC]T[TC][TC] -------------------------------------------------------------------------------- Time 973.84 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:374609-377231 1.78e-03 4_[+3(7.38e-07)]_81 chrVIII:292513-294113 8.42e-04 9_[-3(6.64e-08)]_[-3(1.42e-05)]_61 chrXV:2-1022 7.36e-01 100 chrVII:276874-278716 9.34e-01 100 chrXI:355293-356470 1.14e-02 26_[-3(5.58e-05)]_59 chrI:165999-166606 3.38e-14 14_[-2(1.67e-09)]_21_[+1(3.04e-12)]_\ 14 chrIV:1468034-1469163 5.61e-01 100 chrXVI:812498-813352 4.44e-01 100 chrXIII:651669-652988 9.55e-01 100 chrVII:544144-546108 2.23e-01 100 chrVII:426842-427286 9.40e-01 100 chrXI:517735-518316 3.38e-14 12_[-2(1.06e-10)]_21_[+1(9.48e-11)]_\ 16 chrIV:667724-668253 1.74e-10 53_[-3(2.46e-05)]_1_[-1(3.54e-12)]_\ 1 chrIII:142186-142997 7.48e-02 37_[-3(2.25e-05)]_48 chrXVI:425124-425685 4.49e-01 100 chrIV:1164587-1165790 1.21e-01 100 chrXII:48551-49127 7.95e-05 80_[-3(2.50e-08)]_5 chrV:6144-6613 9.96e-01 100 chrXIV:499260-501488 8.92e-01 100 chrIV:1013090-1013976 1.06e-01 41_[-2(7.24e-05)]_38 chrXII:498389-499675 2.09e-01 100 chrM:58265-58711 5.15e-01 100 chrII:326549-327167 1.53e-05 36_[+2(1.57e-07)]_43 chrXI:617684-619425 6.97e-01 100 chrXVI:209924-210624 3.37e-01 100 chrVII:440368-441391 5.88e-02 100 chrXV:832270-832856 1.80e-01 100 chrXII:214658-215166 6.31e-16 1_[-3(3.48e-05)]_5_[-1(3.04e-12)]_\ 21_[+2(1.67e-09)]_7 chrVII:878086-879370 4.66e-06 3_[-3(6.02e-05)]_14_[-1(1.95e-08)]_\ 38 chrXV:908456-909139 1.79e-01 100 chrXIII:168561-169074 1.34e-02 27_[-2(4.68e-06)]_52 chrV:250106-250570 6.01e-09 38_[+1(1.32e-11)]_32 chrXVI:581837-582395 4.54e-10 37_[+1(1.90e-12)]_33 chrII:544504-544900 4.72e-01 100 chrIV:835727-836378 1.73e-01 100 chrXV:769924-770478 3.38e-01 100 chrIV:980665-981279 1.73e-06 52_[-1(1.66e-08)]_18 chrXIII:761859-762575 8.86e-01 100 chrVII:166109-166540 8.24e-01 100 chrXII:805396-807214 9.08e-01 100 chrVIII:353253-353650 8.10e-01 100 chrX:651178-651278 4.33e-01 100 chrVII:400470-400707 8.24e-04 12_[+3(6.64e-08)]_73 chrVIII:466730-467307 2.76e-11 21_[-2(1.06e-07)]_20_[+1(8.32e-10)]_\ 8 chrXII:924405-925196 6.16e-03 33_[-3(3.36e-06)]_52 chrXIII:290585-291180 2.47e-09 9_[+1(6.52e-11)]_26_[+3(6.95e-05)]_\ 20 chrXIV:102488-102983 1.21e-04 30_[-2(2.09e-07)]_49 chrXIV:602093-602595 5.93e-14 17_[-2(1.18e-09)]_22_[+1(3.54e-12)]_\ 10 chrII:311538-311750 1.87e-01 100 chrXVI:770511-771878 3.92e-02 12_[-3(2.06e-05)]_73 chrXIII:123902-124923 3.16e-01 100 chrIX:183068-183725 5.85e-03 50_[-3(1.99e-06)]_35 chrXV:663516-664115 1.60e-07 47_[-1(1.73e-10)]_23 chrXIII:279719-280279 9.94e-01 100 chrVII:939034-939679 3.11e-01 100 chrXII:86795-87276 5.18e-01 100 chrX:444893-444993 5.08e-01 100 chrVII:115017-115760 9.62e-01 100 chrXVI:302467-304292 1.46e-01 100 chrVI:263706-264440 2.87e-01 100 chrXI:513200-513713 1.23e-01 100 chrXII:903416-903665 1.75e-01 100 chrXII:198585-199683 1.02e-01 100 chrXI:158189-159635 7.69e-02 48_[-3(4.10e-05)]_37 chrV:354668-355387 8.22e-01 100 chrIV:1080188-1081011 4.81e-01 100 chrVII:328368-329252 5.45e-01 100 chrXIII:372202-372762 1.15e-11 13_[-1(1.73e-10)]_22_[+2(5.85e-09)]_\ 14 chrXIV:62286-64760 2.97e-03 55_[-3(6.14e-06)]_30 chrIII:1-1435 8.82e-01 100 chrXII:645202-646354 2.43e-01 100 chrVIII:48141-48590 1.81e-01 100 chrXI:282524-284781 9.51e-01 100 chrXII:84025-84811 2.69e-01 100 chrXII:1051875-1052389 1.19e-05 41_[+2(1.18e-09)]_38 chrXVI:338676-339157 7.31e-03 32_[+2(2.14e-06)]_47 chrV:408207-409612 3.47e-01 100 chrXII:522053-523508 9.39e-01 100 chrIV:1278655-1279157 3.67e-01 100 chrXII:282473-283831 9.25e-01 100 chrVII:343893-346582 6.20e-01 100 chrXVI:515653-517340 4.43e-01 100 chrVI:222996-224166 3.02e-01 100 chrXIV:586935-587105 9.79e-01 100 chrVII:856688-857010 2.72e-01 100 chrII:181290-181686 7.46e-01 100 chrII:60202-61271 6.30e-01 100 chrXII:962652-963965 4.91e-01 100 chrXV:980461-981495 8.48e-01 100 chrVIII:122099-122674 6.54e-01 100 chrII:444647-445212 2.05e-02 39_[+2(4.40e-05)]_40 chrXI:162271-162770 4.69e-10 17_[-1(4.34e-10)]_20_[+2(1.29e-07)]_\ 12 chrXVI:66635-67436 7.29e-03 14_[+1(3.17e-05)]_56 chrIV:341148-341664 4.57e-01 100 chrXV:216143-216822 3.64e-01 100 chrVII:779365-779909 1.28e-11 28_[-2(1.73e-08)]_20_[+1(6.52e-11)]_\ 1 chrXVI:297007-297568 1.70e-04 83_[-3(1.99e-06)]_2 chrXII:656677-657217 8.80e-07 37_[-1(9.48e-11)]_33 chrXVI:810401-811079 2.97e-06 28_[+1(3.10e-10)]_42 chrII:564658-565124 6.69e-01 100 chrVI:157682-158216 6.74e-07 17_[-1(1.19e-08)]_17_[+3(1.16e-05)]_\ 21 chrIII:168096-168599 4.25e-12 4_[-1(1.32e-11)]_20_[+2(3.18e-08)]_\ 25 chrXVI:622287-622907 2.40e-05 40_[+3(1.16e-05)]_8_[+2(7.60e-07)]_\ 16 chrXIII:91598-92094 8.14e-01 100 chrXII:448403-448971 1.45e-12 13_[-1(1.32e-11)]_20_[+2(3.18e-08)]_\ 16 chrII:798557-799469 1.65e-04 38_[-3(7.38e-07)]_47 chrIV:385902-387601 3.26e-02 48_[+3(6.89e-06)]_37 chrXVI:859808-860655 2.96e-01 100 chrXIII:118865-119676 7.90e-01 100 chrXV:92183-94896 8.54e-01 100 chrII:372661-374325 4.59e-04 13_[+3(2.75e-07)]_72 chrIX:248619-249528 7.72e-01 100 chrIV:538864-539597 2.67e-01 100 chrIII:123330-123843 5.48e-10 41_[-1(1.12e-14)]_29 chrV:130791-131392 3.14e-08 41_[-1(1.07e-10)]_29 chrXVI:880079-880744 8.43e-01 100 chrXV:618739-624672 8.46e-02 84_[+3(4.43e-05)]_1 chrXII:1012064-1012431 3.05e-02 24_[-1(1.96e-05)]_46 chrIX:231259-231625 2.81e-01 100 chrXV:464229-464680 3.15e-06 45_[-2(2.32e-09)]_34 chrVII:787470-788759 1.30e-01 100 chrI:182352-182787 6.57e-10 3_[-1(1.66e-08)]_30_[+2(6.75e-09)]_\ 16 chrI:68249-68844 1.78e-01 100 chrIV:619678-620404 5.60e-03 29_[+2(2.81e-06)]_50 chrV:438375-438980 4.65e-05 72_[-2(5.85e-09)]_7 chrVII:576439-577506 5.84e-02 74_[-2(8.07e-05)]_5 chrXVI:39930-41168 3.28e-01 100 chrII:415477-415950 2.47e-01 100 chrXV:925212-925459 3.48e-01 100 chrII:392095-394458 2.04e-04 45_[+3(1.21e-07)]_40 chrVII:730949-731454 1.94e-06 28_[+1(3.10e-10)]_42 chrX:523783-523883 6.57e-10 12_[-1(1.66e-08)]_30_[+2(6.75e-09)]_\ 7 chrXII:709712-711452 3.43e-02 52_[-3(7.50e-05)]_33 chrXII:369113-371900 1.22e-02 29_[+3(4.36e-06)]_6_[+3(6.02e-05)]_\ 35 chrXVI:775534-776091 2.38e-09 3_[-1(1.66e-08)]_20_[+2(3.58e-08)]_\ 26 chrXIII:661110-662303 6.77e-01 100 chrXIV:417493-418205 1.61e-03 59_[+3(1.42e-05)]_26 chrIV:1359181-1361138 7.45e-01 100 chrVII:598716-599573 7.59e-01 100 chrXII:5-266 1.93e-02 50_[-3(4.89e-06)]_35 chrXI:490711-491355 9.89e-07 26_[+1(1.40e-09)]_44 chrV:321554-323113 1.56e-01 100 chrXII:65362-65721 1.10e-02 100 chrXV:778631-779478 3.29e-01 100 chrIV:1233536-1234177 5.12e-01 100 chrII:167773-169710 2.27e-01 100 chrI:229111-230194 2.37e-01 100 chrX:690527-690627 1.52e-03 48_[+2(1.30e-06)]_31 chrXI:219588-220151 1.62e-06 75_[-2(1.06e-10)]_4 chrVIII:62536-62997 9.92e-04 38_[-2(5.49e-07)]_41 chrXIII:914366-915982 4.39e-03 23_[-3(9.82e-07)]_62 chrVII:1049913-1050623 6.70e-01 100 chrXIII:510578-511268 4.58e-01 100 chrIV:568521-569196 7.26e-04 73_[-2(1.29e-07)]_6 chrVIII:358305-358805 1.33e-05 20_[+3(1.16e-05)]_8_[+2(7.60e-07)]_\ 36 chrV:311280-312340 8.21e-01 100 chrVII:661517-662051 4.05e-09 14_[-2(1.06e-07)]_20_[+1(5.38e-09)]_\ 15 chrX:139100-139200 1.79e-01 100 chrIV:358064-358467 1.29e-02 62_[+3(3.85e-06)]_23 chrXII:592319-593250 6.21e-01 100 chrVIII:103867-104320 5.03e-02 58_[+3(1.56e-05)]_27 chrXIII:302469-303171 1.16e-01 100 chrVI:204770-205209 2.26e-08 36_[+2(1.06e-10)]_43 chrVII:384621-385008 3.04e-02 100 chrIV:645004-645415 1.77e-05 44_[+2(3.18e-08)]_35 chrIV:355210-357859 2.58e-01 100 chrXII:1064018-1065373 4.01e-01 100 chrVIII:145994-146457 9.59e-07 67_[-1(9.48e-11)]_3 chrX:617699-617799 1.96e-05 16_[-2(1.96e-08)]_63 chrII:36152-36918 1.56e-04 22_[+3(6.40e-07)]_63 chrX:265346-265446 9.35e-01 100 chrXV:167786-168488 5.62e-01 100 chrII:9343-9912 4.08e-07 5_[-2(1.74e-06)]_32_[+1(1.40e-07)]_\ 12 chrXIV:87110-87950 5.74e-01 100 chrVIII:132813-133363 6.75e-05 48_[+2(6.75e-09)]_31 chrXIV:546947-547403 9.03e-09 40_[+1(6.52e-11)]_30 chrX:517590-517690 6.63e-01 100 chrXIV:442827-444877 1.99e-01 100 chrX:415704-415804 3.03e-01 100 chrVI:191311-191831 5.75e-05 71_[+2(1.02e-08)]_8 chrXII:949451-953220 6.01e-01 100 chrXVI:821427-822513 5.75e-01 100 chrV:486814-487628 5.95e-01 100 chrVIII:146647-146905 6.88e-01 100 chrI:180949-181517 6.33e-05 40_[+1(4.73e-05)]_6_[+3(5.22e-07)]_\ 9 chrII:406614-406904 3.78e-01 100 chrIV:411181-411653 5.19e-01 100 chrIX:370116-370693 4.89e-02 100 chrV:61005-62186 1.19e-01 100 chrXII:704282-704651 7.04e-04 36_[+3(1.21e-07)]_49 chrXII:605119-605618 6.84e-01 100 chrVII:919521-920334 9.07e-01 100 chrXII:855442-857598 9.94e-01 100 chrXII:92319-92870 4.18e-07 3_[-2(2.32e-09)]_76 chrXVI:192992-193922 2.11e-01 100 chrVIII:85007-85581 2.25e-10 25_[-3(1.46e-07)]_14_[-1(1.73e-10)]_\ 16 chrXIV:783443-784325 2.19e-01 100 chrIX:336128-336804 8.51e-01 100 chrVIII:175049-175428 4.84e-01 100 chrX:414750-414850 3.63e-10 36_[+1(1.90e-12)]_3_[+3(4.10e-05)]_\ 16 chrXV:55093-55400 8.75e-01 100 chrXIII:837513-838255 2.42e-01 100 chrIV:721380-722146 1.15e-02 12_[-3(1.06e-05)]_73 chrXIV:498932-499100 2.26e-02 69_[+3(1.72e-05)]_16 chrVII:561405-561970 5.33e-06 25_[-1(1.66e-08)]_45 chrIII:77890-78890 3.86e-01 100 chrVI:101144-101607 7.69e-08 19_[+3(8.03e-05)]_16_[-2(2.32e-09)]_\ 29 chrX:354021-354121 1.48e-05 28_[+1(2.79e-09)]_42 chrVII:531419-531826 4.20e-03 37_[-2(4.23e-05)]_42 chrII:140013-141012 9.50e-01 100 chrIV:307945-310156 8.73e-02 28_[+1(9.56e-05)]_42 chrXII:940465-941296 6.21e-01 100 chrXVI:431622-434328 9.38e-01 100 chrXII:426914-427454 3.89e-05 38_[+1(1.95e-08)]_32 chrXV:281759-282532 3.94e-04 68_[-2(4.01e-08)]_11 chrIV:359339-359899 2.45e-03 7_[-2(1.51e-06)]_72 chrV:435378-436032 2.44e-02 100 chrXVI:352223-353076 9.31e-01 100 chrV:363696-364474 3.32e-01 100 chrV:442985-443523 5.17e-06 50_[+2(1.18e-09)]_29 chrXIII:650762-651490 7.79e-01 100 chrXI:114560-115863 7.73e-01 100 chrXVI:627351-627650 6.90e-01 100 chrXVI:55573-56549 4.57e-01 100 chrX:290851-290951 3.19e-01 100 chrXIII:797910-798671 4.25e-02 17_[+3(1.87e-05)]_4_[-3(8.03e-05)]_\ 49 chrVI:224814-225601 3.17e-01 100 chrXII:793708-796111 3.67e-01 100 chrI:92352-92799 3.27e-04 72_[+3(2.50e-08)]_13 chrIX:324025-324612 7.16e-05 35_[-1(1.95e-08)]_35 chrVII:516254-516921 5.24e-01 100 chrXV:976161-977346 1.78e-02 78_[+3(3.36e-06)]_7 chrVII:555146-558089 8.58e-01 100 chrXV:882112-883108 3.25e-04 5_[+3(6.02e-05)]_7_[+3(6.40e-07)]_\ 16_[+3(2.50e-08)]_27 chrXII:300311-300858 8.29e-01 100 chrVI:221256-222087 5.30e-01 100 chrXIII:267442-269152 9.37e-01 100 chrVII:412100-412596 2.86e-05 48_[+2(5.85e-09)]_31 chrXIII:463183-463919 5.26e-02 52_[-2(4.23e-05)]_27 chrXIV:61675-62084 3.15e-01 100 chrIX:394742-395046 5.13e-03 8_[-3(1.32e-06)]_77 chrXII:5478-5930 7.38e-01 100 chrX:424294-424394 9.51e-01 100 chrVII:122047-122498 7.58e-04 46_[-2(8.60e-08)]_33 chrXV:438384-438986 2.45e-03 7_[-2(1.51e-06)]_72 chrVII:254065-254704 1.99e-01 100 chrXVI:768899-769471 5.67e-01 100 chrVIII:125867-127812 2.25e-02 69_[-3(4.10e-05)]_16 chrXV:571530-572189 1.88e-02 81_[+3(3.36e-06)]_4 chrV:284600-285302 1.93e-01 100 chrXI:313101-313690 6.93e-06 38_[-3(2.25e-05)]_3_[-1(1.07e-07)]_\ 14 chrXI:665543-666774 4.38e-01 100 chrXII:567934-568842 9.08e-01 100 chrVI:167251-167714 7.68e-08 4_[-2(4.68e-06)]_37_[+1(2.79e-09)]_\ 8 chrXII:921274-922625 3.62e-01 100 chrVIII:384338-385536 5.56e-02 57_[-3(1.42e-05)]_28 chrXVI:701844-702274 5.48e-01 100 chrXVI:340509-341065 2.06e-01 100 chrXI:430757-431695 1.51e-01 100 chrIX:137344-139392 1.29e-01 100 chrXV:505004-506904 1.58e-01 100 chrV:117543-118339 9.52e-01 100 chrVI:95366-95948 6.30e-01 100 chrXVI:121371-121781 2.45e-03 61_[-3(3.36e-06)]_24 chrIII:315613-316619 7.43e-01 100 chrVII:701857-703683 5.15e-01 100 chrIV:550689-551374 7.24e-02 50_[-3(4.10e-05)]_35 chrXIII:631736-633995 1.60e-01 100 chrXIV:494702-495620 9.56e-01 100 chrXVI:645195-646289 5.15e-01 100 chrVII:205310-206420 9.25e-01 100 chrXII:817860-820551 2.58e-01 100 chrXIII:320943-321343 3.37e-09 38_[-3(1.42e-05)]_1_[-1(9.48e-11)]_\ 16 chrVIII:375036-375888 6.64e-01 100 chrXVI:188551-189021 6.47e-01 100 chrVII:535452-535853 2.55e-02 57_[+3(6.89e-06)]_28 chrVII:608611-608787 1.53e-01 100 chrXIII:880074-880913 2.21e-01 100 chrXIII:351977-352529 8.36e-04 76_[-2(7.60e-07)]_3 chrXI:551285-552562 6.20e-01 100 chrXIV:104596-105178 6.47e-07 9_[+1(5.41e-10)]_61 chrXIV:725816-726415 2.73e-06 48_[-3(7.79e-06)]_6_[-1(1.40e-07)]_\ 1 chrV:176853-177429 3.97e-07 48_[+1(1.95e-10)]_22 chrIX:67812-69616 3.29e-02 100 chrXII:687639-688228 1.52e-05 28_[+2(5.85e-09)]_51 chrIX:254224-254578 9.64e-03 82_[+3(4.36e-06)]_3 chrX:58620-58720 8.97e-01 100 chrXI:230703-231753 2.52e-02 100 chrIII:11069-11553 8.84e-01 100 chrIV:579018-580930 1.83e-01 100 chrVIII:74882-76315 1.86e-01 100 chrIII:197186-197829 9.16e-01 100 chrXI:67656-69027 6.38e-01 100 chrVII:319588-320195 1.23e-01 100 chrVII:930755-931236 1.81e-11 8_[-1(6.52e-11)]_19_[+2(4.01e-08)]_\ 22 chrV:469221-469763 1.19e-11 14_[-2(5.85e-09)]_22_[+1(1.73e-10)]_\ 13 chrXII:780497-781896 6.01e-01 100 chrXV:759077-759597 4.90e-01 100 chrVII:364890-366700 7.51e-01 100 chrV:304645-306930 2.03e-04 62_[+3(6.64e-08)]_23 chrIV:1095088-1095727 1.12e-07 13_[-1(2.79e-09)]_17_[+3(1.16e-05)]_\ 25 chrXI:302667-303238 6.79e-03 15_[-2(1.83e-05)]_64 chrVII:110430-110928 1.05e-03 46_[+2(5.49e-07)]_33 chrX:68960-69060 3.46e-01 100 chrIV:1256885-1257316 5.48e-04 8_[+2(1.06e-07)]_71 chrVI:4476-5430 2.71e-01 100 chrV:441774-442650 9.79e-01 100 chrXI:0-1013 5.70e-01 100 chrXIII:408358-409094 9.45e-03 76_[+3(1.06e-05)]_9 chrX:531422-531522 3.20e-04 73_[-2(4.01e-08)]_6 chrVI:137218-137997 7.98e-01 100 chrVII:882148-884620 3.10e-01 100 chrII:266137-266652 1.06e-04 33_[-2(2.22e-08)]_46 chrXIII:195901-196441 2.10e-06 28_[+2(2.32e-09)]_51 chrV:430949-431593 2.77e-03 14_[-1(7.80e-06)]_56 chrVI:105984-106938 3.27e-01 100 chrII:254879-257147 2.14e-01 100 chrX:542700-542800 3.06e-07 8_[-3(4.10e-05)]_5_[-1(2.79e-09)]_\ 42 chrIV:1362263-1362823 2.04e-01 100 chrXIV:241354-241781 3.72e-01 100 chrXIII:225337-226696 4.21e-01 100 chrVII:828450-829007 2.13e-06 45_[-1(4.34e-10)]_25 chrIV:1434382-1434922 8.48e-01 100 chrXIII:861158-861431 3.82e-01 100 chrIV:488513-489221 1.53e-05 32_[+2(1.57e-07)]_47 chrVIII:488193-488622 6.88e-04 14_[-3(6.14e-06)]_18_[+2(5.79e-05)]_\ 32 chrVII:608970-610464 1.48e-02 51_[-3(3.36e-06)]_34 chrXV:987168-989796 3.54e-01 100 chrIV:437522-438058 6.75e-05 31_[-2(6.75e-09)]_48 chrVI:226412-226946 5.00e-10 41_[-3(2.93e-05)]_3_[-1(1.90e-12)]_\ 11 chrXIV:619472-620065 6.27e-01 100 chrXIV:96015-96637 2.48e-04 15_[+2(1.73e-08)]_64 chrVII:541606-542197 7.85e-08 39_[+1(1.95e-10)]_31 chrV:152087-153534 1.95e-04 41_[+3(1.21e-07)]_44 chrIV:893907-894436 4.25e-01 100 chrIV:433996-434578 6.23e-11 27_[-1(5.41e-10)]_21_[+2(2.22e-08)]_\ 1 chrIV:1305281-1305951 3.28e-05 63_[-2(6.75e-09)]_16 chrII:87990-88571 1.36e-01 100 chrIV:321429-322005 8.25e-02 100 chrXIV:567851-568502 1.43e-07 60_[+1(6.52e-11)]_10 chrIX:131778-132290 4.03e-02 32_[-2(5.36e-05)]_47 chrIV:118412-118859 9.80e-01 100 chrV:550960-551580 5.14e-08 65_[-1(3.54e-12)]_5 chrIV:802536-803026 4.25e-12 [-1(1.32e-11)]_20_[+2(3.18e-08)]_29 chrXII:514660-515320 6.92e-03 23_[+3(1.51e-06)]_62 chrXV:384680-385053 6.65e-01 100 chrXVI:678839-679739 7.97e-01 100 chrX:652038-652138 4.38e-01 100 chrXII:329271-329650 2.62e-02 60_[-3(1.42e-05)]_25 chrXIV:374630-375264 2.80e-05 31_[+1(2.79e-09)]_39 chrV:110530-110954 5.17e-01 100 chrVIII:548601-548859 4.43e-01 100 chrXII:489292-489576 1.80e-06 34_[-2(5.05e-07)]_27_[+3(1.51e-06)]_\ 3 chrVIII:555978-557204 3.42e-01 100 chrVII:766146-766480 3.36e-01 100 chrV:461529-462483 3.92e-01 100 chrXV:300837-301430 2.85e-06 13_[-2(2.32e-09)]_66 chrIV:1524012-1525659 2.28e-01 100 chrXVI:731650-732343 4.41e-01 100 chrXV:160992-161937 2.55e-01 100 chrXII:854901-855170 8.45e-01 100 chrVIII:451046-452984 7.09e-01 100 chrV:492172-492581 1.59e-09 26_[-1(1.40e-09)]_21_[+2(2.81e-06)]_\ 2 chrII:405197-406243 6.94e-01 100 chrXII:589018-589439 1.35e-02 42_[-3(3.36e-06)]_43 chrXIII:5323-5766 9.96e-01 100 chrXVI:794374-796050 8.64e-01 100 chrXVI:214251-216012 9.06e-01 100 chrIV:322174-323618 3.44e-02 36_[-3(3.48e-05)]_49 chrIX:257328-258868 5.07e-01 100 chrII:408471-409486 1.31e-01 100 chrXI:24642-26505 9.49e-01 100 chrXI:74444-74999 2.69e-02 45_[-3(4.43e-05)]_40 chrIV:410188-410719 3.61e-08 17_[+1(9.48e-11)]_53 chrIV:946119-946630 1.73e-05 45_[+1(2.79e-09)]_25 chrXIV:715445-716651 1.19e-01 72_[+3(5.58e-05)]_13 chrXI:202828-203322 3.93e-08 15_[+1(1.90e-12)]_55 chrI:81852-82308 3.44e-01 100 chrIX:2-226 3.37e-01 100 chrVII:10-1361 4.94e-01 100 chrXIII:20-196 2.27e-02 55_[-3(4.89e-06)]_30 chrXI:340548-341560 3.04e-03 18_[-3(1.32e-06)]_67 chrXIV:632392-632881 2.99e-12 12_[-2(2.09e-07)]_22_[+1(3.10e-10)]_\ [+3(2.06e-05)] chrIV:83302-83835 1.81e-11 29_[-2(4.01e-08)]_19_[+1(6.52e-11)]_\ 1 chrIII:227643-228277 6.31e-07 31_[-2(1.02e-08)]_48 chrXIII:253044-253604 2.28e-01 100 chrVII:371138-371555 5.30e-02 100 chrIV:525090-525385 1.03e-04 64_[+3(2.50e-08)]_1_[+3(2.46e-05)]_\ 5 chrXII:1017704-1019405 4.10e-01 100 chrX:545431-545531 5.00e-03 1_[+2(2.46e-06)]_78 chrVII:10099-10505 7.21e-01 100 chrXIII:306027-307099 9.42e-01 100 chrXI:140743-141357 1.49e-07 18_[-1(1.95e-10)]_52 chrIV:591034-592225 9.97e-03 18_[+3(2.99e-06)]_67 chrXII:11014-11585 7.90e-01 100 chrXII:459607-460720 4.48e-01 100 chrVIII:562306-562582 7.59e-01 100 chrXIV:585395-586590 6.20e-01 100 chrIV:1016930-1017549 7.81e-11 3_[-3(1.71e-06)]_[-1(5.05e-11)]_52 chrVII:397882-398818 6.72e-01 100 chrIII:294658-295934 3.96e-01 100 chrXVI:575132-576482 2.30e-01 100 chrXV:709992-710509 6.22e-07 [-2(2.14e-06)]_20_[+1(3.74e-07)]_29 chrXV:424048-424771 1.89e-01 100 chrXIV:6516-7179 9.23e-02 78_[+2(6.01e-05)]_1 chrVII:773941-774660 1.15e-01 63_[+3(4.43e-05)]_22 chrXVI:74888-76747 3.05e-01 100 chrII:592328-593449 4.01e-01 100 chrXIV:506956-507644 4.58e-01 100 chrXVI:377902-379037 4.64e-01 100 chrV:135180-135715 3.78e-14 28_[-1(1.90e-12)]_21_[+2(8.60e-08)] chrX:90017-90117 8.60e-01 100 chrVII:1003980-1004405 2.04e-04 73_[-2(1.06e-07)]_6 chrX:396531-396631 7.97e-05 37_[+2(4.01e-08)]_42 chrX:378160-378260 2.21e-05 45_[-2(5.85e-09)]_34 chrVII:533477-535241 4.66e-01 100 chrII:332295-333390 1.87e-01 100 chrVIII:411010-411711 9.75e-01 100 chrVIII:147645-149568 9.76e-02 13_[+3(6.02e-05)]_72 chrVII:986769-987845 2.14e-01 100 chrXV:796917-797418 8.85e-01 100 chrIX:197140-198015 2.86e-02 100 chrII:680346-682215 4.63e-01 100 chrXV:113295-113987 5.05e-01 100 chrIV:1175568-1176169 2.49e-09 10_[-2(1.12e-06)]_21_[+1(3.88e-10)]_\ 18 chrIX:325501-326201 2.51e-01 100 chrXI:578784-579366 4.23e-08 4_[+1(1.40e-09)]_37_[-3(4.89e-06)]_\ 14 chrXIII:572691-573350 8.53e-01 100 chrXI:142916-143858 4.23e-01 100 chrX:702792-702892 6.13e-01 100 chrXII:365393-366723 3.86e-01 100 chrXIII:751321-751641 5.64e-01 100 chrII:347373-347935 4.66e-04 51_[+1(1.40e-07)]_19 chrXVI:280639-282962 1.11e-03 40_[+3(3.58e-07)]_45 chrXIII:752968-754843 4.38e-01 100 chrII:477022-477820 1.91e-02 100 chrIX:382177-382433 9.60e-01 100 chrX:705135-705235 5.58e-02 48_[+3(3.76e-05)]_37 chrX:122988-123088 4.63e-02 40_[-2(7.79e-05)]_39 chrXVI:842900-843141 1.26e-01 46_[-3(5.19e-05)]_39 chrXIII:674527-674822 9.62e-01 100 chrXV:380680-381248 2.36e-01 100 chrIX:386280-387134 4.44e-01 100 chrIII:13937-17292 6.98e-01 100 chrIII:177068-178857 1.07e-02 57_[+3(5.57e-06)]_13_[+3(5.19e-05)] chrXVI:856442-857337 4.53e-07 62_[-2(1.06e-10)]_17 chrXIV:560502-561015 2.94e-04 36_[+2(2.22e-08)]_43 chrXIII:378568-379624 4.31e-01 100 chrXV:899930-901817 6.81e-01 100 chrXI:46482-47030 5.98e-15 29_[-1(4.12e-12)]_20_[+2(4.35e-09)] chrII:644982-645486 5.54e-07 23_[+1(1.95e-10)]_47 chrXV:253134-255078 4.28e-01 100 chrVII:794150-794710 1.68e-05 36_[-2(1.67e-09)]_43 chrVII:823254-823705 2.74e-05 52_[-2(5.85e-09)]_27 chrXII:253141-255066 7.26e-01 100 chrVIII:455505-456244 1.87e-04 26_[-3(2.50e-08)]_59 chrXV:779671-780921 7.10e-01 100 chrXIV:88896-90115 4.42e-02 100 chrV:53501-54032 3.24e-01 100 chrIX:98654-100069 7.15e-01 100 chrIV:368815-369229 1.88e-02 20_[-3(1.29e-05)]_65 chrII:555457-558503 3.23e-02 25_[-3(9.85e-05)]_60 chrIX:316112-317620 5.29e-02 100 chrII:88931-89985 8.42e-01 100 chrX:73367-73467 7.65e-01 100 chrVI:269203-270159 7.35e-01 100 chrVII:807773-808093 4.05e-02 8_[-3(1.42e-05)]_77 chrXI:382135-382492 2.97e-01 100 chrIX:299997-300546 4.87e-13 7_[-1(1.90e-12)]_21_[+2(8.60e-08)]_\ 21 chrXII:241441-243710 7.28e-01 100 chrVII:726237-727210 8.56e-01 100 chrXI:83949-84443 4.44e-03 61_[-2(1.74e-06)]_18 chrVIII:505782-506231 9.71e-01 100 chrIV:1201483-1202064 1.86e-12 26_[-2(8.60e-08)]_21_[+1(1.90e-12)]_\ 2 chrXV:977590-977813 2.28e-01 100 chrXIII:886539-888326 1.93e-01 100 chrXIII:768185-768669 5.29e-07 43_[+2(1.06e-10)]_36 chrXII:711668-713800 2.94e-01 100 chrXI:334037-335038 4.22e-01 100 chrXII:404115-404481 1.16e-01 57_[-2(5.16e-05)]_22 chrVIII:381223-383400 7.53e-01 100 chrIII:68324-68716 2.84e-01 100 chrXIII:747744-748165 1.93e-05 38_[+2(1.29e-07)]_6_[+3(5.58e-05)]_\ 20 chrXII:932055-932585 4.29e-01 100 chrXIV:575181-577315 4.89e-01 100 chrIV:519532-521191 1.63e-01 100 chrXIV:413279-416095 6.34e-01 100 chrVIII:475200-475929 1.48e-04 35_[-3(6.64e-08)]_32_[-3(6.02e-05)]_\ 3 chrIV:1354475-1356050 1.61e-01 100 chrV:434376-434768 5.66e-10 3_[-3(6.14e-06)]_1_[-1(1.07e-07)]_\ 20_[+2(5.49e-07)]_10 chrVII:771937-772383 5.62e-01 100 chrVII:736179-736631 3.78e-06 25_[+1(4.34e-10)]_45 chrVII:405297-405825 5.87e-01 100 chrXVI:452875-454064 4.48e-05 43_[-3(2.50e-08)]_42 chrX:195311-195411 6.07e-01 100 chrXV:339970-340618 1.18e-06 55_[-1(1.40e-09)]_15 chrIV:975959-977027 1.08e-01 100 chrII:5836-6995 4.01e-01 100 chrV:99897-100359 7.07e-03 54_[-2(2.14e-06)]_25 chrXVI:502457-503233 1.77e-01 10_[-3(9.23e-05)]_75 chrXVI:641210-642130 2.98e-03 3_[-3(1.13e-06)]_82 chrX:745304-745404 7.81e-01 100 chrXII:636457-640298 7.63e-01 100 chrVII:73667-74152 1.73e-05 22_[+2(5.85e-09)]_36_[-2(5.61e-06)] chrXIII:586459-586909 1.16e-11 2_[-1(1.73e-10)]_22_[+2(5.85e-09)]_\ 25 chrIV:1329945-1330990 7.45e-02 38_[+3(3.48e-05)]_47 chrX:233707-233807 2.38e-02 8_[+3(4.43e-05)]_77 chrVIII:296809-297279 2.88e-01 100 chrXVI:172776-174117 3.51e-01 100 chrXV:1025716-1026198 3.93e-01 100 chrXII:201703-202995 6.10e-01 100 chrVII:700452-701268 9.86e-01 100 chrVII:23865-24129 5.23e-01 100 chrXIII:852010-852394 2.67e-03 44_[+3(4.36e-06)]_41 chrXVI:228007-228298 3.52e-01 100 chrV:226073-226317 2.00e-01 100 chrIII:127514-128041 8.20e-11 31_[+1(3.10e-10)]_11_[+3(2.50e-08)]_\ 13 chrXII:837578-839636 2.14e-01 100 chrIII:82101-82813 9.18e-10 39_[-3(1.13e-06)]_1_[-1(1.95e-10)]_\ 15 chrXII:1028141-1028612 1.06e-02 12_[+3(6.14e-06)]_73 chrXIII:923383-924372 6.94e-01 100 chrVIII:133577-134648 4.32e-01 100 chrXIII:296679-298896 1.65e-01 100 chrXV:1003520-1004923 4.79e-02 85_[+3(2.06e-05)] chrXV:27819-28154 4.59e-01 100 chrXV:977997-979547 3.74e-01 100 chrIV:233845-234829 7.02e-02 100 chrXI:517084-517563 5.54e-03 3_[+3(6.89e-06)]_82 chrXII:262790-263940 9.18e-02 100 chrI:138927-139400 3.17e-06 38_[-2(2.32e-09)]_41 chrXV:82793-83543 5.32e-01 100 chrXII:920866-921046 1.85e-01 100 chrXIII:161890-162445 6.65e-01 100 chrVII:185477-186097 7.65e-04 28_[+2(8.60e-08)]_51 chrXIV:65151-65754 2.80e-02 50_[+1(8.71e-05)]_20 chrXIV:631688-632140 2.45e-04 32_[+2(1.73e-07)]_47 chrVII:286955-287666 7.15e-01 100 chrXIII:347063-347410 6.90e-04 49_[+1(3.46e-06)]_21 chrVII:648814-649424 2.87e-02 13_[-3(2.06e-05)]_72 chrXIII:731418-733533 5.35e-02 3_[-3(1.29e-05)]_82 chrX:422602-422702 2.54e-12 2_[-2(1.12e-06)]_21_[+1(3.88e-10)]_\ 3_[+3(2.58e-06)]_8 chrIII:228440-229473 3.43e-04 58_[+3(6.64e-08)]_27 chrXVI:559982-560525 2.40e-05 42_[+3(1.16e-05)]_8_[+2(7.60e-07)]_\ 14 chrIV:1401202-1403312 2.17e-01 100 chrXII:628160-628990 1.01e-01 44_[+3(6.02e-05)]_41 chrXII:231827-234855 2.69e-01 100 chrX:541299-541399 7.16e-05 40_[+1(1.95e-08)]_30 chrXV:285580-285924 6.34e-04 38_[+3(2.26e-06)]_47 chrXV:353884-354302 1.72e-04 49_[+2(2.22e-08)]_30 chrXII:897644-899646 3.34e-01 100 chrIV:464971-465834 5.71e-03 66_[+3(3.85e-06)]_19 chrIV:599392-600831 2.23e-01 100 chrXI:379491-380019 1.58e-06 17_[+1(1.73e-10)]_53 chrXII:784114-784822 2.79e-05 4_[+1(2.79e-07)]_3_[+3(3.76e-05)]_\ 48 chrX:355107-355207 8.14e-10 37_[+1(4.34e-10)]_2_[+3(2.93e-05)]_\ 16 chrXV:1027773-1029147 1.49e-01 100 chrVI:64025-65358 9.80e-01 100 chrXVI:135287-135830 6.47e-01 100 chrXVI:785198-786239 3.50e-02 63_[+2(3.58e-05)]_16 chrII:642694-643245 6.33e-03 4_[-3(8.55e-06)]_56_[-3(4.89e-06)]_\ 10 chrIV:1062710-1063070 8.70e-01 100 chrXIV:229426-230799 4.21e-02 9_[-3(4.78e-05)]_76 chrXV:594133-594825 9.92e-01 100 chrX:119307-119407 3.91e-01 100 chrVII:480933-484327 2.57e-01 100 chrI:141452-143688 3.21e-02 77_[+3(8.55e-06)]_8 chrVII:857188-857655 1.04e-01 7_[-1(4.73e-05)]_63 chrXVI:819270-819978 1.79e-03 83_[+3(2.58e-06)]_2 chrXIV:502746-503716 4.84e-01 100 chrV:287439-288774 9.77e-01 100 chrVII:147867-149578 9.07e-02 100 chrXII:125170-125375 5.77e-01 100 chrVIII:237678-238143 2.40e-05 35_[+3(1.16e-05)]_8_[+2(7.60e-07)]_\ 21 chrIV:27-321 4.48e-01 100 chrVIII:17016-18130 2.95e-02 100 chrVII:845231-845893 8.50e-01 100 chrIV:1150220-1151721 9.80e-05 [+2(1.02e-08)]_79 chrVII:23259-23698 1.84e-01 83_[+3(9.85e-05)]_2 chrVII:1000271-1000655 7.63e-01 100 chrXIV:330585-332503 6.71e-01 100 chrXV:228078-228621 7.91e-04 31_[-2(2.09e-07)]_48 chrVII:848665-848918 6.78e-01 100 chrV:174684-175061 1.17e-01 100 chrIX:210505-210954 2.99e-08 28_[+1(3.54e-12)]_42 chrXV:911891-913342 5.70e-01 100 chrIX:174810-175304 8.21e-11 23_[-2(2.22e-08)]_21_[+1(5.41e-10)]_\ 5 chrIV:1075302-1075734 1.17e-08 4_[-1(8.60e-12)]_66 chrIX:127128-128144 8.86e-01 100 chrXII:374191-374692 7.10e-06 5_[+1(1.40e-09)]_65 chrIV:129545-131128 1.95e-01 100 chrX:374190-374290 8.14e-10 46_[-3(2.93e-05)]_2_[-1(4.34e-10)]_\ 7 chrV:225229-225731 2.96e-02 25_[+3(7.79e-06)]_60 chrVII:438226-440049 2.78e-01 100 chrIII:292345-293054 4.14e-02 69_[-3(1.56e-05)]_16 chrXIII:549948-553225 9.98e-01 100 chrVII:228467-228836 8.92e-03 11_[-3(8.59e-05)]_33_[-3(3.85e-06)]_\ 26 chrV:302869-303717 9.70e-01 100 chrX:160002-160102 2.32e-04 58_[+3(2.50e-08)]_27 chrXIII:419931-420930 6.93e-01 100 chrX:227760-227860 2.92e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************