******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--SMP1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:350566-351100 1.0000 100 chrVIII:237297-238266 1.0000 100 chrXIV:725928-726427 1.0000 100 chrVII:147889-149551 1.0000 100 chrXI:307935-308480 1.0000 100 chrI:182361-182806 1.0000 100 chrIX:131805-132118 1.0000 100 chrXVI:810428-810895 1.0000 100 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100 chrXIV:567851-568580 1.0000 100 chrIV:1016907-1017823 1.0000 100 chrVI:64104-65405 1.0000 100 chrXIII:362836-363540 1.0000 100 chrVII:287052-287909 1.0000 100 chrXV:109544-110682 1.0000 100 chrXIII:924042-924360 1.0000 100 chrXIV:569650-570175 1.0000 100 chrXII:903161-903703 1.0000 100 chrX:156208-156308 1.0000 100 chrII:226828-227691 1.0000 100 chrVIII:115915-116486 1.0000 100 chrIV:217128-218046 1.0000 100 chrVII:774099-774635 1.0000 100 chrV:250112-251099 1.0000 100 chrIV:220560-220851 1.0000 100 chrIX:324008-324955 1.0000 100 chrVI:221421-222101 1.0000 100 chrIV:433997-434603 1.0000 100 chrX:415692-415792 1.0000 100 chrXIV:442792-443606 1.0000 100 chrVII:736165-736647 1.0000 100 chrXVI:188433-189067 1.0000 100 chrIX:98762-100070 1.0000 100 chrV:13334-13646 1.0000 100 chrXIV:62176-63608 1.0000 100 chrXV:1003875-1004948 1.0000 100 chrXIV:546533-546779 1.0000 100 chrXII:198645-199630 1.0000 100 chrVI:223375-224170 1.0000 100 chrXVI:718397-719158 1.0000 100 chrXII:975639-976321 1.0000 100 chrVIII:381465-383391 1.0000 100 chrXI:162120-162926 1.0000 100 chrIV:1492029-1493112 1.0000 100 chrV:207099-207661 1.0000 100 chrIX:257297-257808 1.0000 100 chrIV:1200790-1201318 1.0000 100 chrII:36145-36973 1.0000 100 chrXVI:860022-860659 1.0000 100 chrVI:222992-223154 1.0000 100 chrIX:230869-231038 1.0000 100 chrXIII:768171-768672 1.0000 100 chrXI:322431-322725 1.0000 100 chrVIII:488303-488570 1.0000 100 chrX:517639-517739 1.0000 100 chrXIII:433504-433809 1.0000 100 chrXII:374194-374715 1.0000 100 chrIV:992576-993048 1.0000 100 chrX:120775-120875 1.0000 100 chrXV:968101-968456 1.0000 100 chrXIII:652060-652864 1.0000 100 chrX:90005-90105 1.0000 100 chrVIII:147608-149327 1.0000 100 chrVIII:79823-80668 1.0000 100 chrXIII:499046-501939 1.0000 100 chrIII:162172-163927 1.0000 100 chrXVI:622268-622864 1.0000 100 chrXV:228051-228599 1.0000 100 chrXVI:303254-304731 1.0000 100 chrXII:1039007-1040285 1.0000 100 chrVIII:132810-133389 1.0000 100 chrX:690545-690645 1.0000 100 chrXIV:575148-575771 1.0000 100 chrXIII:549810-552158 1.0000 100 chrI:138767-139368 1.0000 100 chrXIV:546935-547417 1.0000 100 chrII:181267-181694 1.0000 100 chrXII:637089-640282 1.0000 100 chrX:374210-374310 1.0000 100 chrXV:113302-114415 1.0000 100 chrXV:980436-981046 1.0000 100 chrVII:661322-662192 1.0000 100 chrXIII:352032-352532 1.0000 100 chrXIV:783340-784323 1.0000 100 chrII:373197-375857 1.0000 100 chrXII:605134-605655 1.0000 100 chrX:651186-651286 1.0000 100 chrXVI:743741-744725 1.0000 100 chrVII:319596-320158 1.0000 100 chrXV:925157-925405 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--SMP1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--SMP1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--SMP1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.302 C 0.198 G 0.198 T 0.302 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--SMP1/background): A 0.316 C 0.184 G 0.184 T 0.316 ******************************************************************************** ******************************************************************************** MOTIF AGRTCMBSGGTTCGATYCCSV MEME-1 width = 21 sites = 97 llr = 1730 E-value = 4.1e-362 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGRTCMBSGGTTCGATYCCSV MEME-1 Description -------------------------------------------------------------------------------- Simplified A 7141:4:12::::2a2::::4 pos.-specific C :1:18434::::a::25a754 probability G 286::1357a:::8:1:::53 matrix T :1:8214:::aa:::55:2:: bits 2.4 * * 2.2 * * * 2.0 * * * 1.7 **** * * Relative 1.5 * ****** * Entropy 1.2 ** * ****** *** (25.7 bits) 1.0 ** * ******** **** 0.7 ***** ******** **** 0.5 *************** ***** 0.2 *************** ***** 0.0 --------------------- Multilevel AGGTCCTGGGTTCGATCCCCA consensus G A AGC A CT GC sequence C G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTCMBSGGTTCGATYCCSV MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIII:123434-123837 - 1 5.93e-12 AGGGTGCGGG AGGTCCCGGGTTCGAGTCCCG chrXV:853983-854448 - 31 1.98e-11 TGCAAGGAAG AGGTCATCGGTTCGATTCCGG TTGCGTCCAA chrV:311780-312351 - 17 1.98e-11 TGCAAGGAAG AGGTCATCGGTTCGATTCCGG TTGCGTCCAA chrXIV:569650-570175 - 14 2.36e-11 AATAACGCGG GGATCAGCGGTTCGATCCCGC TAGAGACCAT chrII:197174-197872 + 65 2.36e-11 AATAACGCGG GGATCAGCGGTTCGATCCCGC TAGAGACCAT chrIX:210477-210953 + 44 2.36e-11 AATAACGCGG GGATCAGCGGTTCGATCCCGC TAGAGACCAT chrXVI:819194-820019 + 17 2.36e-11 AATAACGCGG GGATCAGCGGTTCGATCCCGC TAGAGACCAT chrIV:667752-668269 - 56 2.36e-11 AATAACGCGG GGATCAGCGGTTCGATCCCGC TAGAGACCAT chrXVI:879869-880814 - 14 2.36e-11 AATAACGCGG GGATCAGCGGTTCGATCCCGC TAGAGACCAT chrXIV:602080-602608 + 62 2.36e-11 AATAACGCGG GGATCAGCGGTTCGATCCCGC TAGAGACCAT chrV:550934-551730 - 12 2.36e-11 AATAACGCGG GGATCAGCGGTTCGATCCCGC TAGAGACCAA chrV:135163-135758 - 24 9.75e-11 CTTAATCATA AGGTTAGGGGTTCGAGCCCCC TACAGGGCTT chrXI:202830-203339 + 8 9.75e-11 AATCATA AGGTTAGGGGTTCGAGCCCCC TACAGGGCTT chrIV:1201491-1202128 + 34 9.75e-11 CTTAATCATA AGGTTAGGGGTTCGAGCCCCC TACAGGGCTA chrVII:185487-186042 - 9 9.75e-11 CTTAATCATA AGGTTAGGGGTTCGAGCCCCC TACAGGGC chrVII:122015-122666 + 22 9.75e-11 CTTAATCATA AGGTTAGGGGTTCGAGCCCCC TACAGGGCTA chrXV:281799-282552 + 80 1.13e-10 TGCCATCGTT GGGCCCCCGGTTCGATTCCGG chrVI:180621-181303 - 71 1.13e-10 GCCATCGTT GGGCCCCCGGTTCGATTCCGG GCTTGCGCAG chrX:531446-531546 + 63 1.13e-10 TGCCATCGTT GGGCCCCCGGTTCGATTCCGG GCTTGCGCAG chrXIII:183668-184222 - 12 1.13e-10 TGCCATCGTT GGGCCCCCGGTTCGATTCCGG GCTTGCGCAT chrXIII:768171-768672 - 7 1.53e-10 AGCATGGGAG AGGTCTCCGGTTCGATTCCGG ACTCGT chrVII:774099-774635 + 75 1.53e-10 AGCATGGGAG AGGTCTCCGGTTCGATTCCGG ACTCG chrXVI:856742-857229 + 10 1.53e-10 GCATGGGAG AGGTCTCCGGTTCGATTCCGG ACTCGTCCAT chrVIII:145989-146467 - 73 1.53e-10 ATGGGAG AGGTCTCCGGTTCGATTCCGG ACTCGTCCAA chrIV:410158-410723 + 32 1.53e-10 AGCATGGGAG AGGTCTCCGGTTCGATTCCGG ACTCGTCCAA chrXIII:320962-321339 - 56 1.53e-10 AGCATGGGAG AGGTCTCCGGTTCGATTCCGG ACTCGTCCAT chrXII:656650-657202 - 67 1.53e-10 AGCATGGGAG AGGTCTCCGGTTCGATTCCGG ACTCGTCCAA chrVIII:475503-475917 - 55 2.35e-10 CACACGGCAA AGGTCCCGAGTTCGATCCTCG GTTGGAACAT chrXVI:768911-769503 - 59 4.64e-10 GGATACCGAA ATGTCAGGGGTTCGAGCCCCC TATGAGGAGT chrXV:438387-439072 + 30 4.64e-10 GGATACCGAA ATGTCAGGGGTTCGAGCCCCC TATGAGGAGT chrIV:359360-359879 + 74 4.64e-10 GGATACCGAA ATGTCAGGGGTTCGAGCCCCC TATGAG chrXII:875125-875714 + 73 4.64e-10 GGATACCGAA ATGTCAGGGGTTCGAGCCCCC TATGAGG chrXI:578741-579340 + 41 4.64e-10 GGATACCGAA ATGTCAGGGGTTCGAGCCCCC TATGAGGAGT chrX:374210-374310 - 64 5.28e-10 TCTAATCAGA AGATTATGGGTTCGACCCCCA TCGTGAGTGC chrXI:162120-162926 - 23 5.28e-10 TCTAATCAGA AGATTATGGGTTCGACCCCCA TCGTGAGTGT chrVII:736165-736647 + 26 5.28e-10 TCTAATCAGA AGATTATGGGTTCGACCCCCA TCGTGAGTGT chrVII:405287-405820 + 9 5.28e-10 TAATCAGA AGATTATGGGTTCGACCCCCA TCGTGAGTGC chrX:355089-355189 + 52 5.28e-10 TCTAATCAGA AGATTATGGGTTCGACCCCCA TCGTGAGTGC chrIV:568557-569268 + 62 5.28e-10 TCTAATCAGA AGATTATGGGTTCGACCCCCA TCGTGAGTGC chrVII:828435-829050 - 40 5.28e-10 TCTAATCAGA AGATTATGGGTTCGACCCCCA TCGTGAGTGC chrXIII:131469-132262 - 19 5.28e-10 TCTAATCAGA AGATTATGGGTTCGACCCCCA TCGTGAGTGC chrXV:980436-981046 + 67 6.00e-10 AGCATGCGAG AGGCCCTGGGTTCAATTCCCA GCTCGCCCCT chrXIV:546935-547417 + 41 6.00e-10 AGCATGCGAG AGGCCCTGGGTTCAATTCCCA GCTCGCCCCG chrXIV:567851-568580 + 23 6.00e-10 AGCATGCGAG AGGCCCTGGGTTCAATTCCCA GCTCGCCCCT chrXV:300826-301462 + 75 6.00e-10 AGCATGCGAG AGGCCCTGGGTTCAATTCCCA GCTCG chrXIII:195777-196444 - 17 6.00e-10 AGCATGCGAG AGGCCCTGGGTTCAATTCCCA GCTCGCCCCT chrVIII:388652-389228 - 12 6.00e-10 AGCATGCGAG AGGCCCTGGGTTCAATTCCCA GCTCGCCCCA chrXI:46443-47062 - 42 1.56e-09 CGTAATGCGG GGATCGTGGGTTCAATTCCCA CAGAGGGCAT chrIV:488454-489201 - 29 1.75e-09 TACACGGCGA AGATCCCGAGTTCGAACCTCG GTTGGATCAG chrXV:113302-114415 + 37 2.45e-09 AGTAATGTGG AGATCATCGGTTCAAATCCGA TTGGAAGCAT chrIV:433997-434603 - 23 2.45e-09 AGTAATGTGG AGATCATCGGTTCAAATCCGA TTGGAAGCAT chrIX:174799-175335 + 57 2.45e-09 AGTAATGTGG AGATCATCGGTTCAAATCCGA TTGGAAGCAA chrXV:353812-354293 - 48 2.45e-09 AGTAATGTGG AGATCATCGGTTCAAATCCGA TTGGAAGCAT chrIX:325499-326146 + 19 2.45e-09 AGTAATGTGG AGATCATCGGTTCAAATCCGA TTGGAAGCAA chrII:266109-266722 + 56 2.45e-09 AGTAATGTGG AGATCATCGGTTCAAATCCGA TTGGAAGCAT chrX:58679-58779 - 57 2.45e-09 AGTAATGTGG AGATCATCGGTTCAAATCCGA TTGGAAGCAT chrII:644962-645461 + 48 3.76e-09 TTTCACCGTG GAGACCGGGGTTCGACTCCCC GTATCGGAGT chrXIII:290474-291284 + 14 3.76e-09 TTTCACCGTG GAGACCGGGGTTCGACTCCCC GTAGCGGAGT chrVII:541594-542182 + 54 3.76e-09 TTTCACCGTG GAGACCGGGGTTCGACTCCCC GTATCGGAGT chrIII:82213-82800 - 15 3.76e-09 TTTCACCGTG GAGACCGGGGTTCGACTCCCC GTATCGGAGT chrIX:370158-370785 + 38 3.76e-09 TTTCACCGTG GAGACCGGGGTTCGACTCCCC GTATCGGAGT chrXI:379462-379977 + 55 4.63e-09 AACACGCAGA ACGTCCCCAGTTCGATCCTGG GCGAAATCAA chrXV:663523-664144 - 38 4.63e-09 AACACGCAGA ACGTCCCCAGTTCGATCCTGG GCGAAATCGT chrVIII:85063-85591 - 30 4.63e-09 AACACGCAGA ACGTCCCCAGTTCGATCCTGG GCGAAATCAA chrXIII:420335-420900 - 30 4.63e-09 AACACGCAGA ACGTCCCCAGTTCGATCCTGG GCGAAATCAT chrXIII:372142-372761 - 53 4.63e-09 AACACGCAGA ACGTCCCCAGTTCGATCCTGG GCGAAATCAT chrIV:645002-645397 - 13 1.02e-08 TTTGATCCGG ACAACCCCGGTTCGAATCCGG GTAGGACCTT chrV:130794-131392 - 48 1.02e-08 TTTGATCCGA ACAACCCCGGTTCGAATCCGG GTAAGACCTA chrXVI:622268-622864 - 33 1.12e-08 AGTTATCTGG AGGTCCTGTGTTCGATCCACA GAATTCGCAT chrIV:1095048-1095761 - 25 1.12e-08 AGATATCTGG AGGTCCTGTGTTCGATCCACA GAGTTCGCAT chrVI:157634-158221 - 48 1.12e-08 AGTTATCTGG AGGTCCTGTGTTCGATCCACA GAATTCGCAT chrXVI:559988-560523 - 2 1.12e-08 AGTTATCTGG AGGTCCTGTGTTCGATCCACA G chrXV:594104-594717 - 3 1.77e-08 TCCCAAGCAT GAGGCCCGGGTTCGATTCCCG GC chrXII:975639-976321 - 62 1.93e-08 GTTAATCGCA AGATCGTGAGTTCAACCCTCA CTGGGGTCGT chrXV:487236-487711 + 60 1.93e-08 GTTAATCGCA AGATCGTGAGTTCAACCCTCA CTGGGGTCGT chrX:542730-542830 - 2 1.93e-08 CGAAATCTTG AGATCGGGCGTTCGACTCGCC C chrIV:946136-946623 + 42 1.93e-08 CGAAATCTTG AGATCGGGCGTTCGACTCGCC CCCGGGAGAT chrXIV:632383-632910 + 47 1.93e-08 GTTAATCGCA AGATCGTGAGTTCAACCCTCA CTGGGGTCGT chrVII:730941-731434 + 44 1.93e-08 GTTAATCGCA AGATCGTGAGTTCAACCCTCA CTGGGGTCGT chrXIII:168557-169128 + 62 1.93e-08 CGAAATCTTG AGATCGGGCGTTCGACTCGCC CCCGGGAGAT chrVI:167247-167721 + 62 1.93e-08 CGAAATCTTG AGATCGGGCGTTCGACTCGCC CCCGGGAGAT chrXIV:102439-103043 + 69 1.93e-08 GTTAATCGCA AGATCGTGAGTTCAACCCTCA CTGGGGTCGT chrXV:976142-976728 + 79 3.51e-08 CATAATCTGA AGGTCGAGAGTTCGAACCTCC C chrIV:1175558-1176132 + 77 3.51e-08 CATAATCTGA AGGTCGAGAGTTCGAACCTCC CCT chrXIII:808011-808575 - 12 4.48e-08 TCTGATCCGA ACAACCCCAGTTCGAATCCGG GTGGGACCTT chrVIII:466710-467318 + 68 9.60e-08 TGTAATGCAA AGGTCGCTAGTTCAATTCTGG CAGGTGGCAT chrVII:706923-707361 - 25 1.28e-07 GCAAATCTGT TGGTCCTTAGTTCGATCCTGA GTGCGAGCTT chrII:642882-643242 - 4 1.28e-07 GCAAATCTGT TGGTCCTTAGTTCGATCCTGA GTG chrXVI:435601-436197 - 53 1.28e-07 GCAAATCTGT TGGTCCTTAGTTCGATCCTGA GTGCGAGCTT chrXII:962702-963323 + 14 1.79e-07 AAATACTGAA GGATGCGAGGTTCGAACTCGC GCGGACAACC chrIV:519510-520057 - 69 1.79e-07 AGTTATTGAA GGATGCGAGGTTCGAACTCGC GCGGACAACC chrII:347343-347938 - 72 1.79e-07 TTACTGAA GGATGCGAGGTTCGAACTCGC GCGGACAACC chrXIV:725928-726427 + 11 1.79e-07 AAATACTGAA GGATGCGAGGTTCGAACTCGC GCGGACAACC chrXI:490661-491314 + 74 2.33e-07 ACGAACCAGA AGATTCCAGGTTCAAGTCCTG GCGGGG chrIV:619599-620322 - 68 2.33e-07 ACGAACCAGA AGATTCCAGGTTCAAGTCCTG GCGGGGAAGA chrXVI:55824-56560 - 36 2.64e-07 TGCAATCGAA GGGTTGCAGGTTCAATTCCTG TCCGTTTCAA chrIX:336126-336679 - 6 4.53e-07 TGTCGCGTGC CAGATCGGGGTTCAATTCCCC GTCGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTCMBSGGTTCGATYCCSV MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123434-123837 5.9e-12 [-1]_79 chrXV:853983-854448 2e-11 30_[-1]_49 chrV:311780-312351 2e-11 16_[-1]_63 chrXIV:569650-570175 2.4e-11 13_[-1]_66 chrII:197174-197872 2.4e-11 64_[+1]_15 chrIX:210477-210953 2.4e-11 43_[+1]_36 chrXVI:819194-820019 2.4e-11 16_[+1]_63 chrIV:667752-668269 2.4e-11 55_[-1]_24 chrXVI:879869-880814 2.4e-11 13_[-1]_66 chrXIV:602080-602608 2.4e-11 61_[+1]_18 chrV:550934-551730 2.4e-11 11_[-1]_68 chrV:135163-135758 9.8e-11 23_[-1]_56 chrXI:202830-203339 9.8e-11 7_[+1]_72 chrIV:1201491-1202128 9.8e-11 33_[+1]_46 chrVII:185487-186042 9.8e-11 8_[-1]_71 chrVII:122015-122666 9.8e-11 21_[+1]_58 chrXV:281799-282552 1.1e-10 79_[+1] chrVI:180621-181303 1.1e-10 70_[-1]_9 chrX:531446-531546 1.1e-10 62_[+1]_17 chrXIII:183668-184222 1.1e-10 11_[-1]_68 chrXIII:768171-768672 1.5e-10 6_[-1]_73 chrVII:774099-774635 1.5e-10 74_[+1]_5 chrXVI:856742-857229 1.5e-10 9_[+1]_70 chrVIII:145989-146467 1.5e-10 72_[-1]_7 chrIV:410158-410723 1.5e-10 31_[+1]_48 chrXIII:320962-321339 1.5e-10 55_[-1]_24 chrXII:656650-657202 1.5e-10 66_[-1]_13 chrVIII:475503-475917 2.4e-10 54_[-1]_25 chrXVI:768911-769503 4.6e-10 58_[-1]_21 chrXV:438387-439072 4.6e-10 29_[+1]_50 chrIV:359360-359879 4.6e-10 73_[+1]_6 chrXII:875125-875714 4.6e-10 72_[+1]_7 chrXI:578741-579340 4.6e-10 40_[+1]_39 chrX:374210-374310 5.3e-10 63_[-1]_16 chrXI:162120-162926 5.3e-10 22_[-1]_57 chrVII:736165-736647 5.3e-10 25_[+1]_54 chrVII:405287-405820 5.3e-10 8_[+1]_71 chrX:355089-355189 5.3e-10 51_[+1]_28 chrIV:568557-569268 5.3e-10 61_[+1]_18 chrVII:828435-829050 5.3e-10 39_[-1]_40 chrXIII:131469-132262 5.3e-10 18_[-1]_61 chrXV:980436-981046 6e-10 66_[+1]_13 chrXIV:546935-547417 6e-10 40_[+1]_39 chrXIV:567851-568580 6e-10 22_[+1]_57 chrXV:300826-301462 6e-10 74_[+1]_5 chrXIII:195777-196444 6e-10 16_[-1]_63 chrVIII:388652-389228 6e-10 11_[-1]_68 chrXI:46443-47062 1.6e-09 41_[-1]_38 chrIV:488454-489201 1.8e-09 28_[-1]_51 chrXV:113302-114415 2.4e-09 36_[+1]_43 chrIV:433997-434603 2.4e-09 22_[-1]_57 chrIX:174799-175335 2.4e-09 56_[+1]_23 chrXV:353812-354293 2.4e-09 47_[-1]_32 chrIX:325499-326146 2.4e-09 18_[+1]_61 chrII:266109-266722 2.4e-09 55_[+1]_24 chrX:58679-58779 2.4e-09 56_[-1]_23 chrII:644962-645461 3.8e-09 47_[+1]_32 chrXIII:290474-291284 3.8e-09 13_[+1]_66 chrVII:541594-542182 3.8e-09 53_[+1]_26 chrIII:82213-82800 3.8e-09 14_[-1]_65 chrIX:370158-370785 3.8e-09 37_[+1]_42 chrXI:379462-379977 4.6e-09 54_[+1]_25 chrXV:663523-664144 4.6e-09 37_[-1]_42 chrVIII:85063-85591 4.6e-09 29_[-1]_50 chrXIII:420335-420900 4.6e-09 29_[-1]_50 chrXIII:372142-372761 4.6e-09 52_[-1]_27 chrIV:645002-645397 1e-08 12_[-1]_67 chrV:130794-131392 1e-08 47_[-1]_32 chrXVI:622268-622864 1.1e-08 32_[-1]_47 chrIV:1095048-1095761 1.1e-08 24_[-1]_55 chrVI:157634-158221 1.1e-08 47_[-1]_32 chrXVI:559988-560523 1.1e-08 1_[-1]_78 chrXV:594104-594717 1.8e-08 2_[-1]_77 chrXII:975639-976321 1.9e-08 61_[-1]_18 chrXV:487236-487711 1.9e-08 59_[+1]_20 chrX:542730-542830 1.9e-08 1_[-1]_78 chrIV:946136-946623 1.9e-08 41_[+1]_38 chrXIV:632383-632910 1.9e-08 46_[+1]_33 chrVII:730941-731434 1.9e-08 43_[+1]_36 chrXIII:168557-169128 1.9e-08 61_[+1]_18 chrVI:167247-167721 1.9e-08 61_[+1]_18 chrXIV:102439-103043 1.9e-08 68_[+1]_11 chrXV:976142-976728 3.5e-08 78_[+1]_1 chrIV:1175558-1176132 3.5e-08 76_[+1]_3 chrXIII:808011-808575 4.5e-08 11_[-1]_68 chrVIII:466710-467318 9.6e-08 67_[+1]_12 chrVII:706923-707361 1.3e-07 24_[-1]_55 chrII:642882-643242 1.3e-07 3_[-1]_76 chrXVI:435601-436197 1.3e-07 52_[-1]_27 chrXII:962702-963323 1.8e-07 13_[+1]_66 chrIV:519510-520057 1.8e-07 68_[-1]_11 chrII:347343-347938 1.8e-07 71_[-1]_8 chrXIV:725928-726427 1.8e-07 10_[+1]_69 chrXI:490661-491314 2.3e-07 73_[+1]_6 chrIV:619599-620322 2.3e-07 67_[-1]_12 chrXVI:55824-56560 2.6e-07 35_[-1]_44 chrIX:336126-336679 4.5e-07 5_[-1]_74 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTCMBSGGTTCGATYCCSV MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGRTCMBSGGTTCGATYCCSV width=21 seqs=97 chrIII:123434-123837 ( 1) AGGTCCCGGGTTCGAGTCCCG 1 chrXV:853983-854448 ( 31) AGGTCATCGGTTCGATTCCGG 1 chrV:311780-312351 ( 17) AGGTCATCGGTTCGATTCCGG 1 chrXIV:569650-570175 ( 14) GGATCAGCGGTTCGATCCCGC 1 chrII:197174-197872 ( 65) GGATCAGCGGTTCGATCCCGC 1 chrIX:210477-210953 ( 44) GGATCAGCGGTTCGATCCCGC 1 chrXVI:819194-820019 ( 17) GGATCAGCGGTTCGATCCCGC 1 chrIV:667752-668269 ( 56) GGATCAGCGGTTCGATCCCGC 1 chrXVI:879869-880814 ( 14) GGATCAGCGGTTCGATCCCGC 1 chrXIV:602080-602608 ( 62) GGATCAGCGGTTCGATCCCGC 1 chrV:550934-551730 ( 12) GGATCAGCGGTTCGATCCCGC 1 chrV:135163-135758 ( 24) AGGTTAGGGGTTCGAGCCCCC 1 chrXI:202830-203339 ( 8) AGGTTAGGGGTTCGAGCCCCC 1 chrIV:1201491-1202128 ( 34) AGGTTAGGGGTTCGAGCCCCC 1 chrVII:185487-186042 ( 9) AGGTTAGGGGTTCGAGCCCCC 1 chrVII:122015-122666 ( 22) AGGTTAGGGGTTCGAGCCCCC 1 chrXV:281799-282552 ( 80) GGGCCCCCGGTTCGATTCCGG 1 chrVI:180621-181303 ( 71) GGGCCCCCGGTTCGATTCCGG 1 chrX:531446-531546 ( 63) GGGCCCCCGGTTCGATTCCGG 1 chrXIII:183668-184222 ( 12) GGGCCCCCGGTTCGATTCCGG 1 chrXIII:768171-768672 ( 7) AGGTCTCCGGTTCGATTCCGG 1 chrVII:774099-774635 ( 75) AGGTCTCCGGTTCGATTCCGG 1 chrXVI:856742-857229 ( 10) AGGTCTCCGGTTCGATTCCGG 1 chrVIII:145989-146467 ( 73) AGGTCTCCGGTTCGATTCCGG 1 chrIV:410158-410723 ( 32) AGGTCTCCGGTTCGATTCCGG 1 chrXIII:320962-321339 ( 56) AGGTCTCCGGTTCGATTCCGG 1 chrXII:656650-657202 ( 67) AGGTCTCCGGTTCGATTCCGG 1 chrVIII:475503-475917 ( 55) AGGTCCCGAGTTCGATCCTCG 1 chrXVI:768911-769503 ( 59) ATGTCAGGGGTTCGAGCCCCC 1 chrXV:438387-439072 ( 30) ATGTCAGGGGTTCGAGCCCCC 1 chrIV:359360-359879 ( 74) ATGTCAGGGGTTCGAGCCCCC 1 chrXII:875125-875714 ( 73) ATGTCAGGGGTTCGAGCCCCC 1 chrXI:578741-579340 ( 41) ATGTCAGGGGTTCGAGCCCCC 1 chrX:374210-374310 ( 64) AGATTATGGGTTCGACCCCCA 1 chrXI:162120-162926 ( 23) AGATTATGGGTTCGACCCCCA 1 chrVII:736165-736647 ( 26) AGATTATGGGTTCGACCCCCA 1 chrVII:405287-405820 ( 9) AGATTATGGGTTCGACCCCCA 1 chrX:355089-355189 ( 52) AGATTATGGGTTCGACCCCCA 1 chrIV:568557-569268 ( 62) AGATTATGGGTTCGACCCCCA 1 chrVII:828435-829050 ( 40) AGATTATGGGTTCGACCCCCA 1 chrXIII:131469-132262 ( 19) AGATTATGGGTTCGACCCCCA 1 chrXV:980436-981046 ( 67) AGGCCCTGGGTTCAATTCCCA 1 chrXIV:546935-547417 ( 41) AGGCCCTGGGTTCAATTCCCA 1 chrXIV:567851-568580 ( 23) AGGCCCTGGGTTCAATTCCCA 1 chrXV:300826-301462 ( 75) AGGCCCTGGGTTCAATTCCCA 1 chrXIII:195777-196444 ( 17) AGGCCCTGGGTTCAATTCCCA 1 chrVIII:388652-389228 ( 12) AGGCCCTGGGTTCAATTCCCA 1 chrXI:46443-47062 ( 42) GGATCGTGGGTTCAATTCCCA 1 chrIV:488454-489201 ( 29) AGATCCCGAGTTCGAACCTCG 1 chrXV:113302-114415 ( 37) AGATCATCGGTTCAAATCCGA 1 chrIV:433997-434603 ( 23) AGATCATCGGTTCAAATCCGA 1 chrIX:174799-175335 ( 57) AGATCATCGGTTCAAATCCGA 1 chrXV:353812-354293 ( 48) AGATCATCGGTTCAAATCCGA 1 chrIX:325499-326146 ( 19) AGATCATCGGTTCAAATCCGA 1 chrII:266109-266722 ( 56) AGATCATCGGTTCAAATCCGA 1 chrX:58679-58779 ( 57) AGATCATCGGTTCAAATCCGA 1 chrII:644962-645461 ( 48) GAGACCGGGGTTCGACTCCCC 1 chrXIII:290474-291284 ( 14) GAGACCGGGGTTCGACTCCCC 1 chrVII:541594-542182 ( 54) GAGACCGGGGTTCGACTCCCC 1 chrIII:82213-82800 ( 15) GAGACCGGGGTTCGACTCCCC 1 chrIX:370158-370785 ( 38) GAGACCGGGGTTCGACTCCCC 1 chrXI:379462-379977 ( 55) ACGTCCCCAGTTCGATCCTGG 1 chrXV:663523-664144 ( 38) ACGTCCCCAGTTCGATCCTGG 1 chrVIII:85063-85591 ( 30) ACGTCCCCAGTTCGATCCTGG 1 chrXIII:420335-420900 ( 30) ACGTCCCCAGTTCGATCCTGG 1 chrXIII:372142-372761 ( 53) ACGTCCCCAGTTCGATCCTGG 1 chrIV:645002-645397 ( 13) ACAACCCCGGTTCGAATCCGG 1 chrV:130794-131392 ( 48) ACAACCCCGGTTCGAATCCGG 1 chrXVI:622268-622864 ( 33) AGGTCCTGTGTTCGATCCACA 1 chrIV:1095048-1095761 ( 25) AGGTCCTGTGTTCGATCCACA 1 chrVI:157634-158221 ( 48) AGGTCCTGTGTTCGATCCACA 1 chrXVI:559988-560523 ( 2) AGGTCCTGTGTTCGATCCACA 1 chrXV:594104-594717 ( 3) GAGGCCCGGGTTCGATTCCCG 1 chrXII:975639-976321 ( 62) AGATCGTGAGTTCAACCCTCA 1 chrXV:487236-487711 ( 60) AGATCGTGAGTTCAACCCTCA 1 chrX:542730-542830 ( 2) AGATCGGGCGTTCGACTCGCC 1 chrIV:946136-946623 ( 42) AGATCGGGCGTTCGACTCGCC 1 chrXIV:632383-632910 ( 47) AGATCGTGAGTTCAACCCTCA 1 chrVII:730941-731434 ( 44) AGATCGTGAGTTCAACCCTCA 1 chrXIII:168557-169128 ( 62) AGATCGGGCGTTCGACTCGCC 1 chrVI:167247-167721 ( 62) AGATCGGGCGTTCGACTCGCC 1 chrXIV:102439-103043 ( 69) AGATCGTGAGTTCAACCCTCA 1 chrXV:976142-976728 ( 79) AGGTCGAGAGTTCGAACCTCC 1 chrIV:1175558-1176132 ( 77) AGGTCGAGAGTTCGAACCTCC 1 chrXIII:808011-808575 ( 12) ACAACCCCAGTTCGAATCCGG 1 chrVIII:466710-467318 ( 68) AGGTCGCTAGTTCAATTCTGG 1 chrVII:706923-707361 ( 25) TGGTCCTTAGTTCGATCCTGA 1 chrII:642882-643242 ( 4) TGGTCCTTAGTTCGATCCTGA 1 chrXVI:435601-436197 ( 53) TGGTCCTTAGTTCGATCCTGA 1 chrXII:962702-963323 ( 14) GGATGCGAGGTTCGAACTCGC 1 chrIV:519510-520057 ( 69) GGATGCGAGGTTCGAACTCGC 1 chrII:347343-347938 ( 72) GGATGCGAGGTTCGAACTCGC 1 chrXIV:725928-726427 ( 11) GGATGCGAGGTTCGAACTCGC 1 chrXI:490661-491314 ( 74) AGATTCCAGGTTCAAGTCCTG 1 chrIV:619599-620322 ( 68) AGATTCCAGGTTCAAGTCCTG 1 chrXVI:55824-56560 ( 36) GGGTTGCAGGTTCAATTCCTG 1 chrIX:336126-336679 ( 6) CAGATCGGGGTTCAATTCCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTCMBSGGTTCGATYCCSV MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 11.0518 E= 4.1e-362 117 -416 43 -335 -213 -116 211 -262 49 -1324 160 -1324 -177 -84 -416 133 -1324 209 -216 -85 19 120 -35 -213 -394 60 84 23 -213 101 149 -294 -69 -216 197 -294 -1324 -1324 244 -1324 -1324 -1324 -1324 166 -1324 -1324 -1324 166 -1324 244 -1324 -1324 -35 -1324 203 -1324 166 -1324 -1324 -1324 -85 30 -46 55 -1324 151 -1324 59 -1324 238 -1324 -294 -294 199 -216 -77 -1324 149 130 -335 15 93 70 -1324 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTCMBSGGTTCGATYCCSV MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 97 E= 4.1e-362 0.711340 0.010309 0.247423 0.030928 0.072165 0.082474 0.793814 0.051546 0.443299 0.000000 0.556701 0.000000 0.092784 0.103093 0.010309 0.793814 0.000000 0.783505 0.041237 0.175258 0.360825 0.422680 0.144330 0.072165 0.020619 0.278351 0.329897 0.371134 0.072165 0.371134 0.515464 0.041237 0.195876 0.041237 0.721649 0.041237 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.247423 0.000000 0.752577 0.000000 1.000000 0.000000 0.000000 0.000000 0.175258 0.226804 0.134021 0.463918 0.000000 0.525773 0.000000 0.474227 0.000000 0.958763 0.000000 0.041237 0.041237 0.731959 0.041237 0.185567 0.000000 0.515464 0.453608 0.030928 0.350515 0.350515 0.298969 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRTCMBSGGTTCGATYCCSV MEME-1 regular expression -------------------------------------------------------------------------------- [AG]G[GA]TC[CA][TGC][GC]GGTTC[GA]A[TC][CT]CC[CG][ACG] -------------------------------------------------------------------------------- Time 350.79 secs. ******************************************************************************** ******************************************************************************** MOTIF WGSBYNYDTGGCBYAGTGGK MEME-2 width = 20 sites = 129 llr = 1760 E-value = 2.3e-284 ******************************************************************************** -------------------------------------------------------------------------------- Motif WGSBYNYDTGGCBYAGTGGK MEME-2 Description -------------------------------------------------------------------------------- Simplified A 5:111212:3:::1a1:::: pos.-specific C 2143534::::744::11:: probability G :9531224:79:31:9:6a4 matrix T 3:143334a::324::93:5 bits 2.4 * 2.2 * * 2.0 * * 1.7 * * * ** * Relative 1.5 * *** ** * Entropy 1.2 * **** *** * (19.7 bits) 1.0 * **** *** * 0.7 ** **** ****** 0.5 ** * ****** ****** 0.2 ***** ************** 0.0 -------------------- Multilevel AGGTCCCTTGGCCTAGTGGT consensus T CCTTTG A TGC T G sequence G GGA T A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGCBYAGTGGK MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chrII:197174-197872 + 20 2.95e-10 CCAGTAATCA AGGTCTCTTGGCCCAGTTGG TTAAGGCACC chrV:550934-551730 - 58 2.95e-10 CACAGATTAC AGGTCTCTTGGCCCAGTTGG TTAAGGCACC chrXIV:569650-570175 - 60 4.65e-10 CAGATAACAG TGGTCTCTTGGCCCAGTTGG TTAAGGCACC chrXII:734587-735035 + 40 4.65e-10 CAACAAAGTT TGGTCTCTTGGCCCAGTTGG TTAAGGCACC chrXII:1051843-1052427 - 41 4.65e-10 GTCCTTTTCA TGGTCTCTTGGCCCAGTTGG TTAAGGCACC chrXVI:879869-880814 - 60 4.65e-10 AACAATATAA TGGTCTCTTGGCCCAGTTGG TTAAGGCACC chrXIV:602080-602608 + 17 4.65e-10 CAGATAACAA TGGTCTCTTGGCCCAGTTGG TTAAGGCACC chrV:443034-443520 - 30 4.65e-10 CATTAAAATT TGGTCTCTTGGCCCAGTTGG TTAAGGCACC chrXV:464206-464728 + 32 1.32e-09 CAAGTTAACA AGGGCGTGTGGTCTAGTGGT ATGATTCTCG chrXV:853983-854448 - 76 1.93e-09 TCATC AGGGCACATGGCGCAGTTGG TAGCGCGCTT chrXII:214694-215206 - 37 1.93e-09 TACGCGTTTT AGGGCACATGGCGCAGTTGG TAGCGCGCTT chrXIII:768171-768672 - 52 2.79e-09 CAATAAGAAA TGGGCGTGTGGCGTAGTCGG TAGCGCGCTC chrVII:774099-774635 + 31 2.79e-09 ATCAATTAAT TGGGCGTGTGGCGTAGTCGG TAGCGCGCTC chrXVI:775632-776096 - 4 2.79e-09 ATAATTCAAA AGCTCGTATGGCGCAGTGGT AGC chrV:311780-312351 - 62 2.79e-09 ACAGAAATTC TGGGCACATGGCGCAGTTGG TAGCGCGCTT chrVII:706923-707361 - 69 2.79e-09 CAGAAAATCA AGCTCGTATGGCGCAGTGGT AGCGCAGCAG chrII:642882-643242 - 48 2.79e-09 TGTAATAGAA AGCTCGTATGGCGCAGTGGT AGCGCAGCAG chrXI:517744-518169 + 81 2.79e-09 ATATCTACTA TGGGCGTGTGGCGTAGTCGG chrXV:300826-301462 + 2 3.33e-09 T CGGGCGTGTGGTCTAGTGGT ATGATTCTCG chrVII:794125-794665 + 71 4.70e-09 CCATAGATTG CGGGCACATGGCGCAGTTGG TAGCGCGCTT chrX:523833-523933 - 56 1.05e-08 AAGAGATTAA AGGCAACTTGGCCGAGTGGT TAAGGCGAAA chrIV:1305182-1306036 + 70 1.05e-08 ATACAAATTA AGGCAACTTGGCCGAGTGGT TAAGGCGAAA chrVIII:132810-133389 - 40 1.42e-08 ATATAATAAG TGGCAACTTGGCCGAGTGGT TAAGGCGAAA chrXI:379462-379977 + 10 1.42e-08 CAGATTAAT AGGTTTCGTGGTCTAGTCGG TTATGGCATC chrV:438439-438978 + 41 1.42e-08 TCAACAAATT AGGTTTCGTGGTCTAGTCGG TTATGGCATC chrX:378139-378239 + 46 1.42e-08 ATAAATTAAT AGGTTTCGTGGTCTAGTCGG TTATGGCATC chrXII:687616-688239 - 37 1.42e-08 CATAAATAAT AGGTTTCGTGGTCTAGTCGG TTATGGCATC chrXIII:420335-420900 - 76 1.42e-08 ATAAC AGGTTTCGTGGTCTAGTCGG TTATGGCATC chrXIII:258960-259480 - 51 1.42e-08 CAAGTTAGTA TGGCAACTTGGCCGAGTGGT TAAGGCGAAA chrI:182361-182806 - 52 1.42e-08 CATACAATTT TGGCAACTTGGCCGAGTGGT TAAGGCGAAA chrVII:823274-823696 + 46 1.90e-08 CCAATAAGAG TGGTTTCGTGGTCTAGTCGG TTATGGCATC chrVIII:85063-85591 - 76 1.90e-08 GAATT TGGTTTCGTGGTCTAGTCGG TTATGGCATC chrV:469252-469681 + 40 1.90e-08 AAGAAATAAT TGGTTTCGTGGTCTAGTCGG TTATGGCATC chrVII:412115-412613 - 35 1.90e-08 ATCAAAAAAC TGGTTTCGTGGTCTAGTCGG TTATGGCATC chrXI:307935-308480 - 42 1.90e-08 AACAATTAAG TGGTTTCGTGGTCTAGTCGG TTATGGCATC chrXII:605134-605655 - 70 2.18e-08 CTTTCGAAAA TGCTCGTGTAGCTCAGTGGT TAGAGCTTCG chrIV:884147-884667 + 3 2.18e-08 AA TGCTCGTGTAGCTCAGTGGT TAGAGCTTCG chrVIII:466710-467318 + 25 2.51e-08 TTGTATTTTT AGCCTCCTTAGCTTAGTGGT AGAGCGTTGC chrXII:731873-732324 + 41 2.88e-08 CAACATACAA TGGGAGTTTGGCCGAGTGGT TTAAGGCGTC chrX:617670-617770 + 67 2.88e-08 CAACAAACAA TGGGAGTTTGGCCGAGTGGT TTAAGGCGTC chrVII:661322-662192 + 41 3.29e-08 GGTAAAAATT TGCCTCCTTAGCTTAGTGGT AGAGCGTTGC chrVII:1004005-1004421 + 52 3.29e-08 TTCAAGGGTT TGCCTCCTTAGCTTAGTGGT AGAGCGTTGC chrIV:488454-489201 - 75 3.76e-08 GGTTTC CGGTCCAATGGTCCAGTGGT TCAAGACGTC chrXIV:96001-96672 - 8 3.76e-08 ATCCAACACA TGGGCGGTTAGTGTAGTGGT TATCATC chrVII:779342-779898 + 45 5.52e-08 AAGTTAACCC CGGGCGGTTAGTGTAGTGGT TATCATCCCA chrXI:162120-162926 - 67 7.99e-08 AACAAATATT AGCTCGCGTGGCGTAATGGC AACGCGTCTG chrX:355089-355189 + 9 7.99e-08 CAAACAGT AGCTCGCGTGGCGTAATGGC AACGCGTCTG chrII:9305-9913 + 23 7.99e-08 AGAAAATTCG TGGAGGGTTGGCCGAGTGGT CTAAGGCGGC chrIV:568557-569268 + 19 7.99e-08 GACAAATAGT AGCTCGCGTGGCGTAATGGC AACGCGTCTG chrX:424288-424388 - 5 7.99e-08 TTAAATAAGA TGGAGGGTTGGCCGAGTGGT CTAA chrII:405528-406246 + 40 7.99e-08 AACAAATAGT AGCTCGCGTGGCGTAATGGC AACGCGTCTG chrXIII:131469-132262 - 63 7.99e-08 CAAGAAATTT AGCTCGCGTGGCGTAATGGC AACGCGTCTG chrXIV:725928-726427 - 72 7.99e-08 ATAAATCTT TGGAGGGTTGGCCGAGTGGT CTAAGGCGGC chrIV:992576-993048 + 69 9.00e-08 AACAATTGTG AGCGCAAGTGGTTTAGTGGT AAAATCCAAC chrIV:83214-83823 + 79 9.00e-08 AAGTTCACTT AGCGCAAGTGGTTTAGTGGT AA chrX:531446-531546 + 21 9.00e-08 ACAATTAGTG AGCGCAAGTGGTTTAGTGGT AAAATCCAAC chrXV:226438-226954 - 17 9.00e-08 CAAGAAATTC AGCGCAAGTGGTTTAGTGGT AAAATCCAAC chrVI:191288-191844 - 79 9.00e-08 TC TGTCCCAGTGGCCGAGTGGT TAAGGCGATG chrIV:433997-434603 - 68 1.01e-07 ACAAATCAGA AGCTTCTATGGCCAAGTTGG TAAGGCGCCA chrVIII:115915-116486 - 11 1.01e-07 TCACTATTAG AGCTTCTATGGCCAAGTTGG TAAGGCGCCA chrIX:174799-175335 + 13 1.01e-07 AACAAGTACG AGCTTCTATGGCCAAGTTGG TAAGGCGCCA chrVII:857233-857664 - 75 1.01e-07 AATAAG TGGTTGTTTGGCCGAGCGGT CTAAGGCGCC chrXV:594104-594717 - 47 1.01e-07 TTGATTGAAA CGCGCAAGTGGTTCAGTGGT TAGAATTTAT chrIV:1461495-1462190 - 19 1.01e-07 AACAAATAAG TGGTTGTTTGGCCGAGCGGT CTAAGGCGCC chrXIII:808011-808575 - 56 1.14e-07 CAGAAGAAAA AGGTCCTATAGTGTAGTGGT TATCACTTTC chrXII:962702-963323 - 75 1.14e-07 TATCGA CGGAGGGTTGGCCGAGTGGT CTAAGGCGGC chrIV:519510-520057 + 9 1.14e-07 TGATTTTA CGGAGGGTTGGCCGAGTGGT CTAAGGCGGC chrII:347343-347938 + 12 1.14e-07 TTCATTTATA CGGAGGGTTGGCCGAGTGGT CTAAGGCGGC chrII:266109-266722 + 12 1.28e-07 CATCAAAAAC TGCTTCTATGGCCAAGTTGG TAAGGCGCCA chrXIV:374648-375133 + 28 1.43e-07 CAGAAAAATA AGCGGACTTAGCTCAGTTGG GAGAGCGCCA chrIII:168119-168647 - 21 1.43e-07 CAAGAAGTCC TGGTCCTATAGTGTAGTGGT TATCACTTTC chrXV:281799-282552 + 38 1.60e-07 AACATGAAAG CGCGCAAGTGGTTTAGTGGT AAAATCCAAC chrXIII:183668-184222 - 55 1.60e-07 CAATAAAGAT CGCGCAAGTGGTTTAGTGGT AAAATCCAAC chrXV:228051-228599 + 55 1.99e-07 ATAAAATATT AGACTCCATGGCCAAGTTGG TTAAGGCGTG chrIV:645002-645397 - 57 1.99e-07 ACAGTTGTTA CGGTCCTATAGTGTAGTGGT TATCACTTTC chrXV:487236-487711 + 15 1.99e-07 CAACAAAGTT AGACTCCATGGCCAAGTTGG TTAAGGCGTG chrXII:448481-449022 - 2 1.99e-07 CAAGAAGTTC CGGTCCTATAGTGTAGTGGT T chrXI:74405-74853 + 44 1.99e-07 TATAGCAATT AGACTCCATGGCCAAGTTGG TTAAGGCGTG chrIV:802558-803052 - 29 1.99e-07 CATGAATTGT CGGTCCTATAGTGTAGTGGT TATCACTTTC chrVIII:133933-134727 + 40 1.99e-07 CAGTAAGTTC CGGTCCTATAGTGTAGTGGT TATCACTTTC chrXIV:102439-103043 + 24 1.99e-07 ATATATTATA AGACTCCATGGCCAAGTTGG TTAAGGCGTG chrIII:123434-123837 - 45 2.22e-07 TTTTCAAAGG AGGGCGTGTGGTCTAGAGGT ATGATTCTCG chrV:135163-135758 - 69 2.47e-07 CCAAGAAAAA AGCCTTGTTGGCGCAATCGG TAGCGCGTAT chrXIII:480394-480985 - 36 2.47e-07 AACAATAAGT AGCCTTGTTGGCGCAATCGG TAGCGCGTAT chrVII:185487-186042 - 54 2.47e-07 TCAACGAAAT AGCCTTGTTGGCGCAATCGG TAGCGCGTAT chrXIV:632383-632910 + 2 2.47e-07 G TGACTCCATGGCCAAGTTGG TTAAGGCGTG chrIV:1352326-1352776 - 19 2.47e-07 CCAACGAAAT AGCCTTGTTGGCGCAATCGG TAGCGCGTAT chrVI:226540-226975 - 35 3.04e-07 GAGATTAAAA TGCCTTGTTGGCGCAATCGG TAGCGCGTAT chrXVI:689238-689830 + 80 3.04e-07 AGATTATTTT GGGCACTATGGCCGAGTGGT T chrXVI:810428-810895 + 64 3.37e-07 TCATTATTTG CGACTCCATGGCCAAGTTGG TTAAGGCGTG chrXIV:631706-632169 - 12 3.73e-07 CAACTTCTAC CGGGCGTGTGGTCTAGAGGT ATGATTCTCG chrXIII:352032-352532 + 47 4.13e-07 TATGAATATA AGCGGATTTAGCTCAGTTGG GAGAGCGCCA chrXVI:559988-560523 - 66 4.13e-07 ATAGAAATTG AGCGGATTTAGCTCAGTTGG GAGAGCGCCA chrVIII:358297-358841 - 32 4.13e-07 ACAAATAGTA AGCGGATTTAGCTCAGTTGG GAGAGCGCCA chrXII:468764-468984 + 58 5.54e-07 GGTAAGAGCC TGACCGAGTAGTGTAGTGGG TGACCATACG chrXII:489293-489563 + 40 5.54e-07 GGTAAGAGCC TGACCGAGTAGTGTAGTGGG TGACCATACG chrXIV:560500-561043 - 26 6.10e-07 CGTAATAACG GGCTTCTATGGCCAAGTTGG TAAGGCGCCA chrX:690545-690645 - 12 8.87e-07 GGAAGAAGTG TGCCCTGGTGGTAAAGTTGG GTTGAATGGA chrV:99914-100340 + 55 1.51e-06 CAAGTTGGCT AAGCGCCGTGGCGCAGTGGA AGCGCGCAGG chrII:350566-351100 + 43 2.12e-06 ATCAATAAAA GGGTTTTATAGTGTAGTGGT TATCACTTTC chrX:538315-538415 + 65 2.30e-06 CAACCAAGTT GGTTCCGTTGGCGTAATGGT AACGCGTCTC chrXVI:338726-339170 - 3 2.30e-06 CATGATTTAG CAGCGCCGTGGCGCAGTGGA AG chrVIII:62526-62994 + 44 2.70e-06 TAAAATCATA TGCCATCTTAGTATAGTGGT TAGTACACAT chrVII:110424-110987 - 23 2.70e-06 AATAATTACC TGCCATCTTAGTATAGTGGT TAGTACACAT chrXI:313170-313700 - 69 2.70e-06 CACAGTTGTT TGCCATCTTAGTATAGTGGT TAGTACACAT chrIV:1524108-1525684 - 19 2.93e-06 ATCATTATAC ACGGCACTTGCCTCAGCGGT CTATACCCTG chrVI:4474-6058 + 55 2.93e-06 ATCATTATGC ACGGCACTTGCCTCAGCGGT CTATACCCTG chrI:229130-230193 - 42 2.93e-06 ATCACCATAC ACGGCACTTGCCTCAGCGGT CTATACCCTG chrXI:0-1083 + 57 2.93e-06 ATCATTATTC ACGGCACTTGCCTCAGCGGT TTATACCCTG chrIII:2-1691 + 43 2.93e-06 ATCATTATGC ACGGCACTTGCCTCAGCGGT CTATACCCTG chrIV:1175558-1176132 + 33 2.93e-06 TACAAAACAA AGCTTCAGTAGCTCAGTAGG AAGAGCGTCA chrI:3-1127 + 27 2.93e-06 ATCATTATGC ACGGCACTTGCCTCAGCGGT CTATACCCTG chrV:207099-207661 + 26 3.43e-06 TATATAAGTT CGCCATCTTAGTATAGTGGT TAGTACACAT chrVII:115266-115764 + 22 3.43e-06 CGAAGAACTC ATCCTTGTTAGCTCAGTTGG TAGAGCGTTC chrIV:359360-359879 + 7 3.43e-06 GAACTC ATCCTTGTTAGCTCAGTTGG TAGAGCGTTC chrXII:875125-875714 + 6 3.43e-06 AACTC ATCCTTGTTAGCTCAGTTGG TAGAGCGTTC chrXV:976142-976728 + 35 4.32e-06 ATATTTTGTG CGCTTCAGTAGCTCAGTAGG AAGAGCGTCA chrVII:287052-287909 - 7 4.65e-06 TATTTCAAGA TGAAGCGGTGGCTCAATGGT AGAGCT chrVII:878530-879140 - 12 4.65e-06 TATTTCAAGA TGAAGCGGTGGCTCAATGGT AGAGCTTTCG chrX:542730-542830 - 63 5.01e-06 ACAATTAAAT ACTCTCGGTAGCCAAGTTGG TTTAAGGCGC chrXIII:168557-169128 + 2 5.01e-06 C ACTCTCGGTAGCCAAGTTGG TTTAAGGCGC chrVI:167247-167721 + 2 5.01e-06 G ACTCTCGGTAGCCAAGTTGG TTTAAGGCGC chrVI:210477-210930 - 36 5.01e-06 AACAAAAACG ACTCTCGGTAGCCAAGTTGG TTTAAGGCGC chrXIII:924042-924360 + 62 6.71e-06 GGGTAACGAG TGGGGAGGTAGCGTAATGGA GGGTAAGTTA chrXI:490661-491314 + 30 7.73e-06 AATAATTCTT GTTCCTCGTGGCCCAATGGT CACGGCGTCT chrII:36145-36973 + 42 8.88e-06 GCTGATTGGT CGCCCGGGTGATGCAGTTGC GGCCGGCCCT chrXV:558731-559015 - 2 1.83e-05 AAATGGGGTA TGGGTTCATAGTCTAAGGGT G chrXIV:499235-499707 + 3 2.07e-05 TA AACTCATGTGGTGCACTGGT GTTGTTTCCA chrVIII:555833-557206 + 35 2.07e-05 AAAGGTGAGT ATGGCATGTGGTGAGGTGGT AGTGATGGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGCBYAGTGGK MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:197174-197872 3e-10 19_[+2]_61 chrV:550934-551730 3e-10 57_[-2]_23 chrXIV:569650-570175 4.6e-10 59_[-2]_21 chrXII:734587-735035 4.6e-10 39_[+2]_41 chrXII:1051843-1052427 4.6e-10 40_[-2]_40 chrXVI:879869-880814 4.6e-10 59_[-2]_21 chrXIV:602080-602608 4.6e-10 16_[+2]_64 chrV:443034-443520 4.6e-10 29_[-2]_51 chrXV:464206-464728 1.3e-09 31_[+2]_49 chrXV:853983-854448 1.9e-09 75_[-2]_5 chrXII:214694-215206 1.9e-09 36_[-2]_44 chrXIII:768171-768672 2.8e-09 51_[-2]_29 chrVII:774099-774635 2.8e-09 30_[+2]_50 chrXVI:775632-776096 2.8e-09 3_[-2]_77 chrV:311780-312351 2.8e-09 61_[-2]_19 chrVII:706923-707361 2.8e-09 68_[-2]_12 chrII:642882-643242 2.8e-09 47_[-2]_33 chrXI:517744-518169 2.8e-09 80_[+2] chrXV:300826-301462 3.3e-09 1_[+2]_79 chrVII:794125-794665 4.7e-09 70_[+2]_10 chrX:523833-523933 1e-08 55_[-2]_25 chrIV:1305182-1306036 1e-08 69_[+2]_11 chrVIII:132810-133389 1.4e-08 39_[-2]_41 chrXI:379462-379977 1.4e-08 9_[+2]_71 chrV:438439-438978 1.4e-08 40_[+2]_40 chrX:378139-378239 1.4e-08 45_[+2]_35 chrXII:687616-688239 1.4e-08 36_[-2]_44 chrXIII:420335-420900 1.4e-08 75_[-2]_5 chrXIII:258960-259480 1.4e-08 50_[-2]_30 chrI:182361-182806 1.4e-08 51_[-2]_29 chrVII:823274-823696 1.9e-08 45_[+2]_35 chrVIII:85063-85591 1.9e-08 75_[-2]_5 chrV:469252-469681 1.9e-08 39_[+2]_41 chrVII:412115-412613 1.9e-08 34_[-2]_46 chrXI:307935-308480 1.9e-08 41_[-2]_39 chrXII:605134-605655 2.2e-08 69_[-2]_11 chrIV:884147-884667 2.2e-08 2_[+2]_78 chrVIII:466710-467318 2.5e-08 24_[+2]_56 chrXII:731873-732324 2.9e-08 40_[+2]_40 chrX:617670-617770 2.9e-08 66_[+2]_14 chrVII:661322-662192 3.3e-08 40_[+2]_40 chrVII:1004005-1004421 3.3e-08 51_[+2]_29 chrIV:488454-489201 3.8e-08 74_[-2]_6 chrXIV:96001-96672 3.8e-08 7_[-2]_73 chrVII:779342-779898 5.5e-08 44_[+2]_36 chrXI:162120-162926 8e-08 66_[-2]_14 chrX:355089-355189 8e-08 8_[+2]_72 chrII:9305-9913 8e-08 22_[+2]_58 chrIV:568557-569268 8e-08 18_[+2]_62 chrX:424288-424388 8e-08 4_[-2]_76 chrII:405528-406246 8e-08 39_[+2]_41 chrXIII:131469-132262 8e-08 62_[-2]_18 chrXIV:725928-726427 8e-08 71_[-2]_9 chrIV:992576-993048 9e-08 68_[+2]_12 chrIV:83214-83823 9e-08 78_[+2]_2 chrX:531446-531546 9e-08 20_[+2]_60 chrXV:226438-226954 9e-08 16_[-2]_64 chrVI:191288-191844 9e-08 78_[-2]_2 chrIV:433997-434603 1e-07 67_[-2]_13 chrVIII:115915-116486 1e-07 10_[-2]_70 chrIX:174799-175335 1e-07 12_[+2]_68 chrVII:857233-857664 1e-07 74_[-2]_6 chrXV:594104-594717 1e-07 46_[-2]_34 chrIV:1461495-1462190 1e-07 18_[-2]_62 chrXIII:808011-808575 1.1e-07 55_[-2]_25 chrXII:962702-963323 1.1e-07 74_[-2]_6 chrIV:519510-520057 1.1e-07 8_[+2]_72 chrII:347343-347938 1.1e-07 11_[+2]_69 chrII:266109-266722 1.3e-07 11_[+2]_69 chrXIV:374648-375133 1.4e-07 27_[+2]_53 chrIII:168119-168647 1.4e-07 20_[-2]_60 chrXV:281799-282552 1.6e-07 37_[+2]_43 chrXIII:183668-184222 1.6e-07 54_[-2]_26 chrXV:228051-228599 2e-07 54_[+2]_26 chrIV:645002-645397 2e-07 56_[-2]_24 chrXV:487236-487711 2e-07 14_[+2]_66 chrXII:448481-449022 2e-07 1_[-2]_79 chrXI:74405-74853 2e-07 43_[+2]_37 chrIV:802558-803052 2e-07 28_[-2]_52 chrVIII:133933-134727 2e-07 39_[+2]_41 chrXIV:102439-103043 2e-07 23_[+2]_57 chrIII:123434-123837 2.2e-07 44_[-2]_36 chrV:135163-135758 2.5e-07 68_[-2]_12 chrXIII:480394-480985 2.5e-07 35_[-2]_45 chrVII:185487-186042 2.5e-07 53_[-2]_27 chrXIV:632383-632910 2.5e-07 1_[+2]_79 chrIV:1352326-1352776 2.5e-07 18_[-2]_62 chrVI:226540-226975 3e-07 34_[-2]_46 chrXVI:689238-689830 3e-07 79_[+2]_1 chrXVI:810428-810895 3.4e-07 63_[+2]_17 chrXIV:631706-632169 3.7e-07 11_[-2]_69 chrXIII:352032-352532 4.1e-07 46_[+2]_34 chrXVI:559988-560523 4.1e-07 65_[-2]_15 chrVIII:358297-358841 4.1e-07 31_[-2]_49 chrXII:468764-468984 5.5e-07 57_[+2]_23 chrXII:489293-489563 5.5e-07 39_[+2]_41 chrXIV:560500-561043 6.1e-07 25_[-2]_55 chrX:690545-690645 8.9e-07 11_[-2]_69 chrV:99914-100340 1.5e-06 54_[+2]_26 chrII:350566-351100 2.1e-06 42_[+2]_38 chrX:538315-538415 2.3e-06 64_[+2]_16 chrXVI:338726-339170 2.3e-06 2_[-2]_78 chrVIII:62526-62994 2.7e-06 43_[+2]_37 chrVII:110424-110987 2.7e-06 22_[-2]_58 chrXI:313170-313700 2.7e-06 68_[-2]_12 chrIV:1524108-1525684 2.9e-06 18_[-2]_62 chrVI:4474-6058 2.9e-06 54_[+2]_26 chrI:229130-230193 2.9e-06 41_[-2]_39 chrXI:0-1083 2.9e-06 56_[+2]_24 chrIII:2-1691 2.9e-06 42_[+2]_38 chrIV:1175558-1176132 2.9e-06 32_[+2]_48 chrI:3-1127 2.9e-06 26_[+2]_54 chrV:207099-207661 3.4e-06 25_[+2]_55 chrVII:115266-115764 3.4e-06 21_[+2]_59 chrIV:359360-359879 3.4e-06 6_[+2]_74 chrXII:875125-875714 3.4e-06 5_[+2]_75 chrXV:976142-976728 4.3e-06 34_[+2]_46 chrVII:287052-287909 4.7e-06 6_[-2]_74 chrVII:878530-879140 4.7e-06 11_[-2]_69 chrX:542730-542830 5e-06 62_[-2]_18 chrXIII:168557-169128 5e-06 1_[+2]_79 chrVI:167247-167721 5e-06 1_[+2]_79 chrVI:210477-210930 5e-06 35_[-2]_45 chrXIII:924042-924360 6.7e-06 61_[+2]_19 chrXI:490661-491314 7.7e-06 29_[+2]_51 chrII:36145-36973 8.9e-06 41_[+2]_39 chrXV:558731-559015 1.8e-05 1_[-2]_79 chrXIV:499235-499707 2.1e-05 2_[+2]_78 chrVIII:555833-557206 2.1e-05 34_[+2]_46 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGCBYAGTGGK MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WGSBYNYDTGGCBYAGTGGK width=20 seqs=129 chrII:197174-197872 ( 20) AGGTCTCTTGGCCCAGTTGG 1 chrV:550934-551730 ( 58) AGGTCTCTTGGCCCAGTTGG 1 chrXIV:569650-570175 ( 60) TGGTCTCTTGGCCCAGTTGG 1 chrXII:734587-735035 ( 40) TGGTCTCTTGGCCCAGTTGG 1 chrXII:1051843-1052427 ( 41) TGGTCTCTTGGCCCAGTTGG 1 chrXVI:879869-880814 ( 60) TGGTCTCTTGGCCCAGTTGG 1 chrXIV:602080-602608 ( 17) TGGTCTCTTGGCCCAGTTGG 1 chrV:443034-443520 ( 30) TGGTCTCTTGGCCCAGTTGG 1 chrXV:464206-464728 ( 32) AGGGCGTGTGGTCTAGTGGT 1 chrXV:853983-854448 ( 76) AGGGCACATGGCGCAGTTGG 1 chrXII:214694-215206 ( 37) AGGGCACATGGCGCAGTTGG 1 chrXIII:768171-768672 ( 52) TGGGCGTGTGGCGTAGTCGG 1 chrVII:774099-774635 ( 31) TGGGCGTGTGGCGTAGTCGG 1 chrXVI:775632-776096 ( 4) AGCTCGTATGGCGCAGTGGT 1 chrV:311780-312351 ( 62) TGGGCACATGGCGCAGTTGG 1 chrVII:706923-707361 ( 69) AGCTCGTATGGCGCAGTGGT 1 chrII:642882-643242 ( 48) AGCTCGTATGGCGCAGTGGT 1 chrXI:517744-518169 ( 81) TGGGCGTGTGGCGTAGTCGG 1 chrXV:300826-301462 ( 2) CGGGCGTGTGGTCTAGTGGT 1 chrVII:794125-794665 ( 71) CGGGCACATGGCGCAGTTGG 1 chrX:523833-523933 ( 56) AGGCAACTTGGCCGAGTGGT 1 chrIV:1305182-1306036 ( 70) AGGCAACTTGGCCGAGTGGT 1 chrVIII:132810-133389 ( 40) TGGCAACTTGGCCGAGTGGT 1 chrXI:379462-379977 ( 10) AGGTTTCGTGGTCTAGTCGG 1 chrV:438439-438978 ( 41) AGGTTTCGTGGTCTAGTCGG 1 chrX:378139-378239 ( 46) AGGTTTCGTGGTCTAGTCGG 1 chrXII:687616-688239 ( 37) AGGTTTCGTGGTCTAGTCGG 1 chrXIII:420335-420900 ( 76) AGGTTTCGTGGTCTAGTCGG 1 chrXIII:258960-259480 ( 51) TGGCAACTTGGCCGAGTGGT 1 chrI:182361-182806 ( 52) TGGCAACTTGGCCGAGTGGT 1 chrVII:823274-823696 ( 46) TGGTTTCGTGGTCTAGTCGG 1 chrVIII:85063-85591 ( 76) TGGTTTCGTGGTCTAGTCGG 1 chrV:469252-469681 ( 40) TGGTTTCGTGGTCTAGTCGG 1 chrVII:412115-412613 ( 35) TGGTTTCGTGGTCTAGTCGG 1 chrXI:307935-308480 ( 42) TGGTTTCGTGGTCTAGTCGG 1 chrXII:605134-605655 ( 70) TGCTCGTGTAGCTCAGTGGT 1 chrIV:884147-884667 ( 3) TGCTCGTGTAGCTCAGTGGT 1 chrVIII:466710-467318 ( 25) AGCCTCCTTAGCTTAGTGGT 1 chrXII:731873-732324 ( 41) TGGGAGTTTGGCCGAGTGGT 1 chrX:617670-617770 ( 67) TGGGAGTTTGGCCGAGTGGT 1 chrVII:661322-662192 ( 41) TGCCTCCTTAGCTTAGTGGT 1 chrVII:1004005-1004421 ( 52) TGCCTCCTTAGCTTAGTGGT 1 chrIV:488454-489201 ( 75) CGGTCCAATGGTCCAGTGGT 1 chrXIV:96001-96672 ( 8) TGGGCGGTTAGTGTAGTGGT 1 chrVII:779342-779898 ( 45) CGGGCGGTTAGTGTAGTGGT 1 chrXI:162120-162926 ( 67) AGCTCGCGTGGCGTAATGGC 1 chrX:355089-355189 ( 9) AGCTCGCGTGGCGTAATGGC 1 chrII:9305-9913 ( 23) TGGAGGGTTGGCCGAGTGGT 1 chrIV:568557-569268 ( 19) AGCTCGCGTGGCGTAATGGC 1 chrX:424288-424388 ( 5) TGGAGGGTTGGCCGAGTGGT 1 chrII:405528-406246 ( 40) AGCTCGCGTGGCGTAATGGC 1 chrXIII:131469-132262 ( 63) AGCTCGCGTGGCGTAATGGC 1 chrXIV:725928-726427 ( 72) TGGAGGGTTGGCCGAGTGGT 1 chrIV:992576-993048 ( 69) AGCGCAAGTGGTTTAGTGGT 1 chrIV:83214-83823 ( 79) AGCGCAAGTGGTTTAGTGGT 1 chrX:531446-531546 ( 21) AGCGCAAGTGGTTTAGTGGT 1 chrXV:226438-226954 ( 17) AGCGCAAGTGGTTTAGTGGT 1 chrVI:191288-191844 ( 79) TGTCCCAGTGGCCGAGTGGT 1 chrIV:433997-434603 ( 68) AGCTTCTATGGCCAAGTTGG 1 chrVIII:115915-116486 ( 11) AGCTTCTATGGCCAAGTTGG 1 chrIX:174799-175335 ( 13) AGCTTCTATGGCCAAGTTGG 1 chrVII:857233-857664 ( 75) TGGTTGTTTGGCCGAGCGGT 1 chrXV:594104-594717 ( 47) CGCGCAAGTGGTTCAGTGGT 1 chrIV:1461495-1462190 ( 19) TGGTTGTTTGGCCGAGCGGT 1 chrXIII:808011-808575 ( 56) AGGTCCTATAGTGTAGTGGT 1 chrXII:962702-963323 ( 75) CGGAGGGTTGGCCGAGTGGT 1 chrIV:519510-520057 ( 9) CGGAGGGTTGGCCGAGTGGT 1 chrII:347343-347938 ( 12) CGGAGGGTTGGCCGAGTGGT 1 chrII:266109-266722 ( 12) TGCTTCTATGGCCAAGTTGG 1 chrXIV:374648-375133 ( 28) AGCGGACTTAGCTCAGTTGG 1 chrIII:168119-168647 ( 21) TGGTCCTATAGTGTAGTGGT 1 chrXV:281799-282552 ( 38) CGCGCAAGTGGTTTAGTGGT 1 chrXIII:183668-184222 ( 55) CGCGCAAGTGGTTTAGTGGT 1 chrXV:228051-228599 ( 55) AGACTCCATGGCCAAGTTGG 1 chrIV:645002-645397 ( 57) CGGTCCTATAGTGTAGTGGT 1 chrXV:487236-487711 ( 15) AGACTCCATGGCCAAGTTGG 1 chrXII:448481-449022 ( 2) CGGTCCTATAGTGTAGTGGT 1 chrXI:74405-74853 ( 44) AGACTCCATGGCCAAGTTGG 1 chrIV:802558-803052 ( 29) CGGTCCTATAGTGTAGTGGT 1 chrVIII:133933-134727 ( 40) CGGTCCTATAGTGTAGTGGT 1 chrXIV:102439-103043 ( 24) AGACTCCATGGCCAAGTTGG 1 chrIII:123434-123837 ( 45) AGGGCGTGTGGTCTAGAGGT 1 chrV:135163-135758 ( 69) AGCCTTGTTGGCGCAATCGG 1 chrXIII:480394-480985 ( 36) AGCCTTGTTGGCGCAATCGG 1 chrVII:185487-186042 ( 54) AGCCTTGTTGGCGCAATCGG 1 chrXIV:632383-632910 ( 2) TGACTCCATGGCCAAGTTGG 1 chrIV:1352326-1352776 ( 19) AGCCTTGTTGGCGCAATCGG 1 chrVI:226540-226975 ( 35) TGCCTTGTTGGCGCAATCGG 1 chrXVI:689238-689830 ( 80) GGGCACTATGGCCGAGTGGT 1 chrXVI:810428-810895 ( 64) CGACTCCATGGCCAAGTTGG 1 chrXIV:631706-632169 ( 12) CGGGCGTGTGGTCTAGAGGT 1 chrXIII:352032-352532 ( 47) AGCGGATTTAGCTCAGTTGG 1 chrXVI:559988-560523 ( 66) AGCGGATTTAGCTCAGTTGG 1 chrVIII:358297-358841 ( 32) AGCGGATTTAGCTCAGTTGG 1 chrXII:468764-468984 ( 58) TGACCGAGTAGTGTAGTGGG 1 chrXII:489293-489563 ( 40) TGACCGAGTAGTGTAGTGGG 1 chrXIV:560500-561043 ( 26) GGCTTCTATGGCCAAGTTGG 1 chrX:690545-690645 ( 12) TGCCCTGGTGGTAAAGTTGG 1 chrV:99914-100340 ( 55) AAGCGCCGTGGCGCAGTGGA 1 chrII:350566-351100 ( 43) GGGTTTTATAGTGTAGTGGT 1 chrX:538315-538415 ( 65) GGTTCCGTTGGCGTAATGGT 1 chrXVI:338726-339170 ( 3) CAGCGCCGTGGCGCAGTGGA 1 chrVIII:62526-62994 ( 44) TGCCATCTTAGTATAGTGGT 1 chrVII:110424-110987 ( 23) TGCCATCTTAGTATAGTGGT 1 chrXI:313170-313700 ( 69) TGCCATCTTAGTATAGTGGT 1 chrIV:1524108-1525684 ( 19) ACGGCACTTGCCTCAGCGGT 1 chrVI:4474-6058 ( 55) ACGGCACTTGCCTCAGCGGT 1 chrI:229130-230193 ( 42) ACGGCACTTGCCTCAGCGGT 1 chrXI:0-1083 ( 57) ACGGCACTTGCCTCAGCGGT 1 chrIII:2-1691 ( 43) ACGGCACTTGCCTCAGCGGT 1 chrIV:1175558-1176132 ( 33) AGCTTCAGTAGCTCAGTAGG 1 chrI:3-1127 ( 27) ACGGCACTTGCCTCAGCGGT 1 chrV:207099-207661 ( 26) CGCCATCTTAGTATAGTGGT 1 chrVII:115266-115764 ( 22) ATCCTTGTTAGCTCAGTTGG 1 chrIV:359360-359879 ( 7) ATCCTTGTTAGCTCAGTTGG 1 chrXII:875125-875714 ( 6) ATCCTTGTTAGCTCAGTTGG 1 chrXV:976142-976728 ( 35) CGCTTCAGTAGCTCAGTAGG 1 chrVII:287052-287909 ( 7) TGAAGCGGTGGCTCAATGGT 1 chrVII:878530-879140 ( 12) TGAAGCGGTGGCTCAATGGT 1 chrX:542730-542830 ( 63) ACTCTCGGTAGCCAAGTTGG 1 chrXIII:168557-169128 ( 2) ACTCTCGGTAGCCAAGTTGG 1 chrVI:167247-167721 ( 2) ACTCTCGGTAGCCAAGTTGG 1 chrVI:210477-210930 ( 36) ACTCTCGGTAGCCAAGTTGG 1 chrXIII:924042-924360 ( 62) TGGGGAGGTAGCGTAATGGA 1 chrXI:490661-491314 ( 30) GTTCCTCGTGGCCCAATGGT 1 chrII:36145-36973 ( 42) CGCCCGGGTGATGCAGTTGC 1 chrXV:558731-559015 ( 2) TGGGTTCATAGTCTAAGGGT 1 chrXIV:499235-499707 ( 3) AACTCATGTGGTGCACTGGT 1 chrVIII:555833-557206 ( 35) ATGGCATGTGGTGAGGTGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGCBYAGTGGK MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 48600 bayes= 7.71256 E= 2.3e-284 53 -25 -225 14 -376 -125 223 -303 -203 95 148 -254 -235 72 56 21 -176 134 -66 4 -49 52 43 -26 -165 124 13 -26 -54 -1366 107 32 -1366 -1366 -1366 166 -22 -1366 199 -1366 -534 -198 236 -1366 -1366 187 -1366 4 -303 126 68 -49 -126 95 -48 27 165 -1366 -457 -1366 -135 -457 224 -1366 -435 -157 -457 153 -435 -40 162 -18 -1366 -1366 244 -1366 -376 -198 126 63 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGCBYAGTGGK MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 129 E= 2.3e-284 0.457364 0.155039 0.038760 0.348837 0.023256 0.077519 0.860465 0.038760 0.077519 0.356589 0.511628 0.054264 0.062016 0.302326 0.271318 0.364341 0.093023 0.465116 0.116279 0.325581 0.224806 0.263566 0.248062 0.263566 0.100775 0.434109 0.201550 0.263566 0.217054 0.000000 0.387597 0.395349 0.000000 0.000000 0.000000 1.000000 0.271318 0.000000 0.728682 0.000000 0.007752 0.046512 0.945736 0.000000 0.000000 0.674419 0.000000 0.325581 0.038760 0.441860 0.294574 0.224806 0.131783 0.356589 0.131783 0.379845 0.992248 0.000000 0.007752 0.000000 0.124031 0.007752 0.868217 0.000000 0.015504 0.062016 0.007752 0.914729 0.015504 0.139535 0.565891 0.279070 0.000000 0.000000 1.000000 0.000000 0.023256 0.046512 0.441860 0.488372 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGSBYNYDTGGCBYAGTGGK MEME-2 regular expression -------------------------------------------------------------------------------- [AT]G[GC][TCG][CT][CTGA][CTG][TGA]T[GA]G[CT][CGT][TC]AGT[GT]G[TG] -------------------------------------------------------------------------------- Time 671.08 secs. ******************************************************************************** ******************************************************************************** MOTIF TAAGGCRYCDSVCTWDYAAKS MEME-3 width = 21 sites = 80 llr = 1089 E-value = 1.5e-138 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAAGGCRYCDSVCTWDYAAKS MEME-3 Description -------------------------------------------------------------------------------- Simplified A :a5:1:4124:5::54296:: pos.-specific C 1::3:a:462337:114:325 probability G ::279:611263::22:1:34 matrix T a:3::::5231:3a334:151 bits 2.4 * 2.2 * 2.0 ** 1.7 * ** * Relative 1.5 ** ** * Entropy 1.2 ** **** ** * (19.6 bits) 1.0 ** **** * ** * * 0.7 ** **** * ** * * 0.5 ** ****** **** **** 0.2 ********* **** ***** 0.0 --------------------- Multilevel TAAGGCGTCAGACTAATAATC consensus TC AC TCCT TTC CGG sequence G G GA C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAGGCRYCDSVCTWDYAAKS MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrXV:113302-114415 + 13 2.19e-10 GCCAAGTTGG TAAGGCGCCACACTAGTAATG TGGAGATCAT chrIV:433997-434603 - 47 2.19e-10 GCCAAGTTGG TAAGGCGCCACACTAGTAATG TGGAGATCAT chrIX:174799-175335 + 33 2.19e-10 GCCAAGTTGG TAAGGCGCCACACTAGTAATG TGGAGATCAT chrXV:353812-354293 - 72 2.19e-10 CAAGTTGG TAAGGCGCCACACTAGTAATG TGGAGATCAT chrII:266109-266722 + 32 2.19e-10 GCCAAGTTGG TAAGGCGCCACACTAGTAATG TGGAGATCAT chrXIV:560500-561043 - 5 2.19e-10 GCCAAGTTGG TAAGGCGCCACACTAGTAATG TGGA chrXV:228051-228599 + 76 2.46e-08 CCAAGTTGGT TAAGGCGTGCGACTGTTAATC GCAA chrXV:487236-487711 + 36 2.46e-08 CCAAGTTGGT TAAGGCGTGCGACTGTTAATC GCAAGATCGT chrXIV:632383-632910 + 23 2.46e-08 CCAAGTTGGT TAAGGCGTGCGACTGTTAATC GCAAGATCGT chrVII:730941-731434 + 20 2.46e-08 CCAAGTTGGT TAAGGCGTGCGACTGTTAATC GCAAGATCGT chrXI:74405-74853 + 65 2.46e-08 CCAAGTTGGT TAAGGCGTGCGACTGTTAATC GCAAGATCGT chrXI:46443-47062 - 66 2.46e-08 GGCCAAGTGG TAAGGCATCGCACTCGTAATG CGGGGATCGT chrXIV:102439-103043 + 45 2.46e-08 CCAAGTTGGT TAAGGCGTGCGACTGTTAATC GCAAGATCGT chrVII:823274-823696 + 67 3.31e-08 TCTAGTCGGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrXI:379462-379977 + 31 3.31e-08 TCTAGTCGGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrV:438439-438978 + 62 3.31e-08 TCTAGTCGGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrXV:663523-664144 - 62 3.31e-08 TCTAGTCGGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrVIII:85063-85591 - 54 3.31e-08 TCTAGTCGGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrX:378139-378239 + 67 3.31e-08 TCTAGTCGGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrV:469252-469681 + 61 3.31e-08 TCTAGTCGGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrXII:687616-688239 - 15 3.31e-08 TCTAGTCGGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrXIII:420335-420900 - 54 3.31e-08 TCTAGTCGGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrXIII:372142-372761 - 77 3.31e-08 GGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrVII:412115-412613 - 13 3.31e-08 TCTAGTCGGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrXI:307935-308480 - 20 3.31e-08 TCTAGTCGGT TATGGCATCTGCTTAACACGC AGAACGTCCC chrXIV:569650-570175 - 38 5.80e-08 CCCAGTTGGT TAAGGCACCGTGCTAATAACG CGGGGATCAG chrII:197174-197872 + 41 5.80e-08 CCCAGTTGGT TAAGGCACCGTGCTAATAACG CGGGGATCAG chrIX:210477-210953 + 20 5.80e-08 CCCAGTTGGT TAAGGCACCGTGCTAATAACG CGGGGATCAG chrXII:734587-735035 + 61 5.80e-08 CCCAGTTGGT TAAGGCACCGTGCTAATAACG CGGGGATCAG chrXII:1051843-1052427 - 19 5.80e-08 CCCAGTTGGT TAAGGCACCGTGCTAATAACG CGGGGATCAG chrIV:667752-668269 - 80 5.80e-08 . TAAGGCACCGTGCTAATAACG CGGGGATCAG chrXVI:879869-880814 - 38 5.80e-08 CCCAGTTGGT TAAGGCACCGTGCTAATAACG CGGGGATCAG chrXIV:602080-602608 + 38 5.80e-08 CCCAGTTGGT TAAGGCACCGTGCTAATAACG CGGGGATCAG chrV:550934-551730 - 36 5.80e-08 CCCAGTTGGT TAAGGCACCGTGCTAATAACG CGGGGATCAG chrV:443034-443520 - 8 5.80e-08 CCCAGTTGGT TAAGGCACCGTGCTAATAACG CGGGGAT chrXV:853983-854448 - 55 9.73e-08 GCGCAGTTGG TAGCGCGCTTCCCTTGCAAGG AAGAGGTCAT chrV:311780-312351 - 41 9.73e-08 GCGCAGTTGG TAGCGCGCTTCCCTTGCAAGG AAGAGGTCAT chrXII:214694-215206 - 16 9.73e-08 GCGCAGTTGG TAGCGCGCTTCCCTTGCAAGG AAGAGGTCAT chrV:135163-135758 - 48 1.57e-07 GCGCAATCGG TAGCGCGTATGACTCTTAATC ATAAGGTTAG chrXIII:480394-480985 - 15 1.57e-07 GCGCAATCGG TAGCGCGTATGACTCTTAATC ATAAGGTTAG chrIV:1201491-1202128 + 10 1.57e-07 CGCAATCGG TAGCGCGTATGACTCTTAATC ATAAGGTTAG chrVII:185487-186042 - 33 1.57e-07 GCGCAATCGG TAGCGCGTATGACTCTTAATC ATAAGGTTAG chrVI:226540-226975 - 14 1.57e-07 GCGCAATCGG TAGCGCGTATGACTCTTAATC ATAAGGTTAG chrII:9305-9913 + 44 1.76e-07 CCGAGTGGTC TAAGGCGGCAGACTTAAGATC TGTTGGACGG chrXII:962702-963323 - 53 1.76e-07 CCGAGTGGTC TAAGGCGGCAGACTTAAGATC TGTTGGACGG chrIV:519510-520057 + 30 1.76e-07 CCGAGTGGTC TAAGGCGGCAGACTTAAGATC TGTTGGACGG chrII:347343-347938 + 33 1.76e-07 CCGAGTGGTC TAAGGCGGCAGACTTAAGATC TGTTGGACGG chrXIV:725928-726427 - 50 1.76e-07 CCGAGTGGTC TAAGGCGGCAGACTTAAGATC TGTTGGACGG chrVII:736165-736647 + 2 3.73e-07 G CAACGCGTCTGACTTCTAATC AGAAGATTAT chrVII:828435-829050 - 64 3.73e-07 GGCGTAATGG CAACGCGTCTGACTTCTAATC AGAAGATTAT chrVIII:132810-133389 - 19 4.12e-07 GCCGAGTGGT TAAGGCGAAAGATTAGAAATC TTTTGGGCTT chrVII:561387-561965 - 78 4.12e-07 GT TAAGGCGAAAGATTAGAAATC TTTTGGGCTT chrX:523833-523933 - 35 4.12e-07 GCCGAGTGGT TAAGGCGAAAGATTAGAAATC TTTTGGGCTT chrXIII:258960-259480 - 30 4.12e-07 GCCGAGTGGT TAAGGCGAAAGATTAGAAATC TTTTGGGCTT chrI:182361-182806 - 31 4.12e-07 GCCGAGTGGT TAAGGCGAAAGATTAGAAATC TTTTGGGCTT chrXIII:768171-768672 - 31 7.93e-07 GCGTAGTCGG TAGCGCGCTCCCTTAGCATGG GAGAGGTCTC chrVII:774099-774635 + 51 7.93e-07 GCGTAGTCGG TAGCGCGCTCCCTTAGCATGG GAGAGGTCTC chrIV:410158-410723 + 8 7.93e-07 TAGTCGG TAGCGCGCTCCCTTAGCATGG GAGAGGTCTC chrXIII:320962-321339 - 80 7.93e-07 . TAGCGCGCTCCCTTAGCATGG GAGAGGTCTC chrVII:115266-115764 + 42 1.21e-06 GCTCAGTTGG TAGAGCGTTCGGCTTTTAAGC GCATTTGCTT chrIV:359360-359879 + 27 1.21e-06 GCTCAGTTGG TAGAGCGTTCGGCTTTTAAGC GCATTTGCTT chrXII:875125-875714 + 26 1.21e-06 GCTCAGTTGG TAGAGCGTTCGGCTTTTAAGC GCATTTGCTT chrX:542730-542830 - 40 1.42e-06 CAAGTTGGTT TAAGGCGCAAGACTGTAATTT ATCACTACGA chrIV:946136-946623 + 4 1.42e-06 GTT TAAGGCGCAAGACTGTAATTT ATCACTACGA chrXIII:168557-169128 + 24 1.42e-06 CAAGTTGGTT TAAGGCGCAAGACTGTAATTT ACCACTACGA chrVI:167247-167721 + 24 1.42e-06 CAAGTTGGTT TAAGGCGCAAGACTGTAATTT ACCACTACGA chrVI:210477-210930 - 13 1.42e-06 CAAGTTGGTT TAAGGCGCAAGACTGTAATTT ACCACTACGA chrII:644962-645461 + 25 1.93e-06 GTGTAACGGC TATCACATCACGCTTTCACCG TGGAGACCGG chrVII:541594-542182 + 31 1.93e-06 GTGTAACGGC TATCACATCACGCTTTCACCG TGGAGACCGG chrV:486985-487840 - 1 1.93e-06 GTGTAACGGC TATCACATCACGCTTTCACCG chrIII:82213-82800 - 38 1.93e-06 GTGTAACGGC TATCACATCACGCTTTCACCG TGGAGACCGG chrXI:140718-141476 - 3 1.93e-06 GTGTAACGGC TATCACATCACGCTTTCACCG TG chrIX:370158-370785 + 15 1.93e-06 GTGTAACGGC TATCACATCACGCTTTCACCG TGGAGACCGG chrXVI:435601-436197 - 77 2.08e-06 TGG TAGCGCAGCAGATTGCAAATC TGTTGGTCCT chrIV:488454-489201 - 53 2.58e-06 TCCAGTGGTT CAAGACGTCGCCTTTACACGG CGAAGATCCC chrXII:731873-732324 + 62 2.58e-06 CCGAGTGGTT TAAGGCGTCAGATTTAGGTGG ATTTAACCTC chrVIII:475503-475917 - 79 6.16e-06 C TATCACGTTGCCTTCACACGG CAAAGGTCCC chrIV:1075292-1075790 - 14 6.16e-06 GTGTAGCGGC TATCACGTTGCCTTCACACGG CAAAGGTCCC chrXI:490661-491314 + 50 7.63e-06 GCCCAATGGT CACGGCGTCTGGCTACGAACC AGAAGATTCC chrVI:191288-191844 - 58 9.33e-06 GCCGAGTGGT TAAGGCGATGCCCTGCTATTT CCTCAGAAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAGGCRYCDSVCTWDYAAKS MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXV:113302-114415 2.2e-10 12_[+3]_67 chrIV:433997-434603 2.2e-10 46_[-3]_33 chrIX:174799-175335 2.2e-10 32_[+3]_47 chrXV:353812-354293 2.2e-10 71_[-3]_8 chrII:266109-266722 2.2e-10 31_[+3]_48 chrXIV:560500-561043 2.2e-10 4_[-3]_75 chrXV:228051-228599 2.5e-08 75_[+3]_4 chrXV:487236-487711 2.5e-08 35_[+3]_44 chrXIV:632383-632910 2.5e-08 22_[+3]_57 chrVII:730941-731434 2.5e-08 19_[+3]_60 chrXI:74405-74853 2.5e-08 64_[+3]_15 chrXI:46443-47062 2.5e-08 65_[-3]_14 chrXIV:102439-103043 2.5e-08 44_[+3]_35 chrVII:823274-823696 3.3e-08 66_[+3]_13 chrXI:379462-379977 3.3e-08 30_[+3]_49 chrV:438439-438978 3.3e-08 61_[+3]_18 chrXV:663523-664144 3.3e-08 61_[-3]_18 chrVIII:85063-85591 3.3e-08 53_[-3]_26 chrX:378139-378239 3.3e-08 66_[+3]_13 chrV:469252-469681 3.3e-08 60_[+3]_19 chrXII:687616-688239 3.3e-08 14_[-3]_65 chrXIII:420335-420900 3.3e-08 53_[-3]_26 chrXIII:372142-372761 3.3e-08 76_[-3]_3 chrVII:412115-412613 3.3e-08 12_[-3]_67 chrXI:307935-308480 3.3e-08 19_[-3]_60 chrXIV:569650-570175 5.8e-08 37_[-3]_42 chrII:197174-197872 5.8e-08 40_[+3]_39 chrIX:210477-210953 5.8e-08 19_[+3]_60 chrXII:734587-735035 5.8e-08 60_[+3]_19 chrXII:1051843-1052427 5.8e-08 18_[-3]_61 chrIV:667752-668269 5.8e-08 79_[-3] chrXVI:879869-880814 5.8e-08 37_[-3]_42 chrXIV:602080-602608 5.8e-08 37_[+3]_42 chrV:550934-551730 5.8e-08 35_[-3]_44 chrV:443034-443520 5.8e-08 7_[-3]_72 chrXV:853983-854448 9.7e-08 54_[-3]_25 chrV:311780-312351 9.7e-08 40_[-3]_39 chrXII:214694-215206 9.7e-08 15_[-3]_64 chrV:135163-135758 1.6e-07 47_[-3]_32 chrXIII:480394-480985 1.6e-07 14_[-3]_65 chrIV:1201491-1202128 1.6e-07 9_[+3]_70 chrVII:185487-186042 1.6e-07 32_[-3]_47 chrVI:226540-226975 1.6e-07 13_[-3]_66 chrII:9305-9913 1.8e-07 43_[+3]_36 chrXII:962702-963323 1.8e-07 52_[-3]_27 chrIV:519510-520057 1.8e-07 29_[+3]_50 chrII:347343-347938 1.8e-07 32_[+3]_47 chrXIV:725928-726427 1.8e-07 49_[-3]_30 chrVII:736165-736647 3.7e-07 1_[+3]_78 chrVII:828435-829050 3.7e-07 63_[-3]_16 chrVIII:132810-133389 4.1e-07 18_[-3]_61 chrVII:561387-561965 4.1e-07 77_[-3]_2 chrX:523833-523933 4.1e-07 34_[-3]_45 chrXIII:258960-259480 4.1e-07 29_[-3]_50 chrI:182361-182806 4.1e-07 30_[-3]_49 chrXIII:768171-768672 7.9e-07 30_[-3]_49 chrVII:774099-774635 7.9e-07 50_[+3]_29 chrIV:410158-410723 7.9e-07 7_[+3]_72 chrXIII:320962-321339 7.9e-07 79_[-3] chrVII:115266-115764 1.2e-06 41_[+3]_38 chrIV:359360-359879 1.2e-06 26_[+3]_53 chrXII:875125-875714 1.2e-06 25_[+3]_54 chrX:542730-542830 1.4e-06 39_[-3]_40 chrIV:946136-946623 1.4e-06 3_[+3]_76 chrXIII:168557-169128 1.4e-06 23_[+3]_56 chrVI:167247-167721 1.4e-06 23_[+3]_56 chrVI:210477-210930 1.4e-06 12_[-3]_67 chrII:644962-645461 1.9e-06 24_[+3]_55 chrVII:541594-542182 1.9e-06 30_[+3]_49 chrV:486985-487840 1.9e-06 [-3]_79 chrIII:82213-82800 1.9e-06 37_[-3]_42 chrXI:140718-141476 1.9e-06 2_[-3]_77 chrIX:370158-370785 1.9e-06 14_[+3]_65 chrXVI:435601-436197 2.1e-06 76_[-3]_3 chrIV:488454-489201 2.6e-06 52_[-3]_27 chrXII:731873-732324 2.6e-06 61_[+3]_18 chrVIII:475503-475917 6.2e-06 78_[-3]_1 chrIV:1075292-1075790 6.2e-06 13_[-3]_66 chrXI:490661-491314 7.6e-06 49_[+3]_30 chrVI:191288-191844 9.3e-06 57_[-3]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAGGCRYCDSVCTWDYAAKS MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAAGGCRYCDSVCTWDYAAKS width=21 seqs=80 chrXV:113302-114415 ( 13) TAAGGCGCCACACTAGTAATG 1 chrIV:433997-434603 ( 47) TAAGGCGCCACACTAGTAATG 1 chrIX:174799-175335 ( 33) TAAGGCGCCACACTAGTAATG 1 chrXV:353812-354293 ( 72) TAAGGCGCCACACTAGTAATG 1 chrII:266109-266722 ( 32) TAAGGCGCCACACTAGTAATG 1 chrXIV:560500-561043 ( 5) TAAGGCGCCACACTAGTAATG 1 chrXV:228051-228599 ( 76) TAAGGCGTGCGACTGTTAATC 1 chrXV:487236-487711 ( 36) TAAGGCGTGCGACTGTTAATC 1 chrXIV:632383-632910 ( 23) TAAGGCGTGCGACTGTTAATC 1 chrVII:730941-731434 ( 20) TAAGGCGTGCGACTGTTAATC 1 chrXI:74405-74853 ( 65) TAAGGCGTGCGACTGTTAATC 1 chrXI:46443-47062 ( 66) TAAGGCATCGCACTCGTAATG 1 chrXIV:102439-103043 ( 45) TAAGGCGTGCGACTGTTAATC 1 chrVII:823274-823696 ( 67) TATGGCATCTGCTTAACACGC 1 chrXI:379462-379977 ( 31) TATGGCATCTGCTTAACACGC 1 chrV:438439-438978 ( 62) TATGGCATCTGCTTAACACGC 1 chrXV:663523-664144 ( 62) TATGGCATCTGCTTAACACGC 1 chrVIII:85063-85591 ( 54) TATGGCATCTGCTTAACACGC 1 chrX:378139-378239 ( 67) TATGGCATCTGCTTAACACGC 1 chrV:469252-469681 ( 61) TATGGCATCTGCTTAACACGC 1 chrXII:687616-688239 ( 15) TATGGCATCTGCTTAACACGC 1 chrXIII:420335-420900 ( 54) TATGGCATCTGCTTAACACGC 1 chrXIII:372142-372761 ( 77) TATGGCATCTGCTTAACACGC 1 chrVII:412115-412613 ( 13) TATGGCATCTGCTTAACACGC 1 chrXI:307935-308480 ( 20) TATGGCATCTGCTTAACACGC 1 chrXIV:569650-570175 ( 38) TAAGGCACCGTGCTAATAACG 1 chrII:197174-197872 ( 41) TAAGGCACCGTGCTAATAACG 1 chrIX:210477-210953 ( 20) TAAGGCACCGTGCTAATAACG 1 chrXII:734587-735035 ( 61) TAAGGCACCGTGCTAATAACG 1 chrXII:1051843-1052427 ( 19) TAAGGCACCGTGCTAATAACG 1 chrIV:667752-668269 ( 80) TAAGGCACCGTGCTAATAACG 1 chrXVI:879869-880814 ( 38) TAAGGCACCGTGCTAATAACG 1 chrXIV:602080-602608 ( 38) TAAGGCACCGTGCTAATAACG 1 chrV:550934-551730 ( 36) TAAGGCACCGTGCTAATAACG 1 chrV:443034-443520 ( 8) TAAGGCACCGTGCTAATAACG 1 chrXV:853983-854448 ( 55) TAGCGCGCTTCCCTTGCAAGG 1 chrV:311780-312351 ( 41) TAGCGCGCTTCCCTTGCAAGG 1 chrXII:214694-215206 ( 16) TAGCGCGCTTCCCTTGCAAGG 1 chrV:135163-135758 ( 48) TAGCGCGTATGACTCTTAATC 1 chrXIII:480394-480985 ( 15) TAGCGCGTATGACTCTTAATC 1 chrIV:1201491-1202128 ( 10) TAGCGCGTATGACTCTTAATC 1 chrVII:185487-186042 ( 33) TAGCGCGTATGACTCTTAATC 1 chrVI:226540-226975 ( 14) TAGCGCGTATGACTCTTAATC 1 chrII:9305-9913 ( 44) TAAGGCGGCAGACTTAAGATC 1 chrXII:962702-963323 ( 53) TAAGGCGGCAGACTTAAGATC 1 chrIV:519510-520057 ( 30) TAAGGCGGCAGACTTAAGATC 1 chrII:347343-347938 ( 33) TAAGGCGGCAGACTTAAGATC 1 chrXIV:725928-726427 ( 50) TAAGGCGGCAGACTTAAGATC 1 chrVII:736165-736647 ( 2) CAACGCGTCTGACTTCTAATC 1 chrVII:828435-829050 ( 64) CAACGCGTCTGACTTCTAATC 1 chrVIII:132810-133389 ( 19) TAAGGCGAAAGATTAGAAATC 1 chrVII:561387-561965 ( 78) TAAGGCGAAAGATTAGAAATC 1 chrX:523833-523933 ( 35) TAAGGCGAAAGATTAGAAATC 1 chrXIII:258960-259480 ( 30) TAAGGCGAAAGATTAGAAATC 1 chrI:182361-182806 ( 31) TAAGGCGAAAGATTAGAAATC 1 chrXIII:768171-768672 ( 31) TAGCGCGCTCCCTTAGCATGG 1 chrVII:774099-774635 ( 51) TAGCGCGCTCCCTTAGCATGG 1 chrIV:410158-410723 ( 8) TAGCGCGCTCCCTTAGCATGG 1 chrXIII:320962-321339 ( 80) TAGCGCGCTCCCTTAGCATGG 1 chrVII:115266-115764 ( 42) TAGAGCGTTCGGCTTTTAAGC 1 chrIV:359360-359879 ( 27) TAGAGCGTTCGGCTTTTAAGC 1 chrXII:875125-875714 ( 26) TAGAGCGTTCGGCTTTTAAGC 1 chrX:542730-542830 ( 40) TAAGGCGCAAGACTGTAATTT 1 chrIV:946136-946623 ( 4) TAAGGCGCAAGACTGTAATTT 1 chrXIII:168557-169128 ( 24) TAAGGCGCAAGACTGTAATTT 1 chrVI:167247-167721 ( 24) TAAGGCGCAAGACTGTAATTT 1 chrVI:210477-210930 ( 13) TAAGGCGCAAGACTGTAATTT 1 chrII:644962-645461 ( 25) TATCACATCACGCTTTCACCG 1 chrVII:541594-542182 ( 31) TATCACATCACGCTTTCACCG 1 chrV:486985-487840 ( 1) TATCACATCACGCTTTCACCG 1 chrIII:82213-82800 ( 38) TATCACATCACGCTTTCACCG 1 chrXI:140718-141476 ( 3) TATCACATCACGCTTTCACCG 1 chrIX:370158-370785 ( 15) TATCACATCACGCTTTCACCG 1 chrXVI:435601-436197 ( 77) TAGCGCAGCAGATTGCAAATC 1 chrIV:488454-489201 ( 53) CAAGACGTCGCCTTTACACGG 1 chrXII:731873-732324 ( 62) TAAGGCGTCAGATTTAGGTGG 1 chrVIII:475503-475917 ( 79) TATCACGTTGCCTTCACACGG 1 chrIV:1075292-1075790 ( 14) TATCACGTTGCCTTCACACGG 1 chrXI:490661-491314 ( 50) CACGGCGTCTGGCTACGAACC 1 chrVI:191288-191844 ( 58) TAAGGCGATGCCCTGCTATTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAGGCRYCDSVCTWDYAAKS MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 8.65966 E= 1.5e-138 -1297 -188 -1297 159 166 -1297 -1297 -1297 77 -388 12 -34 -307 64 188 -1297 -149 -1297 227 -1297 -1297 244 -1297 -1297 25 -1297 176 -1297 -207 93 -129 66 -75 164 -129 -96 20 -18 3 -14 -1297 71 164 -134 55 64 44 -1297 -1297 188 -1297 4 -1297 -1297 -1297 166 59 -88 -18 -27 29 -156 37 -2 -66 93 -288 43 155 -1297 -129 -1297 92 51 -1297 -120 -1297 21 82 55 -1297 144 121 -207 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAGGCRYCDSVCTWDYAAKS MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 80 E= 1.5e-138 0.000000 0.050000 0.000000 0.950000 1.000000 0.000000 0.000000 0.000000 0.537500 0.012500 0.200000 0.250000 0.037500 0.287500 0.675000 0.000000 0.112500 0.000000 0.887500 0.000000 0.000000 1.000000 0.000000 0.000000 0.375000 0.000000 0.625000 0.000000 0.075000 0.350000 0.075000 0.500000 0.187500 0.575000 0.075000 0.162500 0.362500 0.162500 0.187500 0.287500 0.000000 0.300000 0.575000 0.125000 0.462500 0.287500 0.250000 0.000000 0.000000 0.675000 0.000000 0.325000 0.000000 0.000000 0.000000 1.000000 0.475000 0.100000 0.162500 0.262500 0.387500 0.062500 0.237500 0.312500 0.200000 0.350000 0.025000 0.425000 0.925000 0.000000 0.075000 0.000000 0.600000 0.262500 0.000000 0.137500 0.000000 0.212500 0.325000 0.462500 0.000000 0.500000 0.425000 0.075000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAGGCRYCDSVCTWDYAAKS MEME-3 regular expression -------------------------------------------------------------------------------- TA[ATG][GC]GC[GA][TC]C[AT][GC][ACG][CT]T[AT][ATG][TCA]A[AC][TGC][CG] -------------------------------------------------------------------------------- Time 971.27 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:350566-351100 5.14e-04 42_[+2(2.12e-06)]_38 chrVIII:237297-238266 3.19e-02 37_[-2(6.64e-05)]_43 chrXIV:725928-726427 5.78e-12 10_[+1(1.79e-07)]_18_[-3(1.76e-07)]_\ 1_[-2(7.99e-08)]_9 chrVII:147889-149551 4.06e-01 100 chrXI:307935-308480 2.98e-09 19_[-3(3.31e-08)]_1_[-2(1.90e-08)]_\ 39 chrI:182361-182806 2.13e-08 30_[-3(4.12e-07)]_[-2(1.42e-08)]_29 chrIX:131805-132118 8.21e-01 100 chrXVI:810428-810895 2.26e-04 63_[+2(3.37e-07)]_17 chrXIII:586435-587166 5.45e-01 100 chrVII:479217-482992 1.78e-02 68_[-2(4.14e-05)]_12 chrVII:364899-366756 4.83e-01 100 chrXI:458344-458965 2.71e-01 100 chrIV:1013125-1014000 2.86e-01 100 chrIII:227599-228210 8.74e-02 100 chrXVI:340536-340786 1.06e-01 100 chrIV:1305182-1306036 3.93e-05 69_[+2(1.05e-08)]_11 chrXI:665151-666798 8.23e-01 100 chrV:60942-62232 1.58e-01 100 chrXIV:493684-495750 6.34e-02 11_[+1(5.95e-05)]_68 chrIV:1256880-1257344 1.59e-01 100 chrXII:489293-489563 1.59e-03 39_[+2(5.54e-07)]_41 chrV:53501-53980 6.10e-01 100 chrI:3-1127 5.04e-03 26_[+2(2.93e-06)]_54 chrXI:578741-579340 1.06e-06 40_[+1(4.64e-10)]_39 chrXVI:135196-135860 7.78e-01 100 chrVII:412115-412613 2.98e-09 12_[-3(3.31e-08)]_1_[-2(1.90e-08)]_\ 46 chrXV:673607-674154 5.23e-01 100 chrXII:214694-215206 9.89e-10 15_[-3(9.73e-08)]_[-2(1.93e-09)]_44 chrVII:876045-877182 9.93e-01 100 chrXV:779691-780831 6.23e-01 100 chrXIII:131469-132262 4.78e-14 18_[-1(5.28e-10)]_23_[-2(7.99e-08)]_\ 18 chrV:287455-288786 7.02e-01 100 chrXVI:571438-572747 2.79e-01 100 chrIII:11043-11606 9.02e-01 100 chrIV:1175558-1176132 7.47e-08 32_[+2(2.93e-06)]_24_[+1(3.51e-08)]_\ 3 chrXV:631885-632104 2.03e-01 100 chrIV:1259540-1259957 7.80e-01 100 chrXIII:753425-754857 3.39e-01 100 chrVII:204823-205769 9.26e-01 100 chrXII:793720-795406 3.64e-01 100 chrVIII:388652-389228 3.31e-06 11_[-1(6.00e-10)]_68 chrX:617670-617770 8.00e-05 66_[+2(2.88e-08)]_14 chrII:44982-45400 9.96e-01 100 chrVIII:555833-557206 2.55e-02 34_[+2(2.07e-05)]_46 chrXII:924251-924833 4.43e-01 100 chrXIII:258960-259480 2.13e-08 29_[-3(4.12e-07)]_[-2(1.42e-08)]_30 chrXIV:102439-103043 2.62e-13 23_[+2(1.99e-07)]_1_[+3(2.46e-08)]_\ 3_[+1(1.93e-08)]_11 chrXIV:585397-586570 9.76e-01 100 chrVII:440425-441925 3.09e-01 100 chrXVI:745252-746204 5.39e-01 100 chrXIII:91588-92083 4.02e-01 100 chrIX:355006-355500 7.89e-01 100 chrXV:571297-572345 9.91e-01 100 chrXIII:225328-226712 1.23e-01 100 chrVIII:34423-36498 6.74e-01 100 chrXII:91597-92986 6.92e-01 100 chrX:523833-523933 7.26e-10 34_[-3(4.12e-07)]_[-2(1.05e-08)]_25 chrIII:2-1691 4.84e-03 42_[+2(2.93e-06)]_38 chrXVI:228037-228266 4.93e-01 100 chrVII:73688-74418 8.01e-01 100 chrXI:517744-518169 3.25e-05 80_[+2(2.79e-09)] chrXII:921340-922591 8.05e-01 100 chrXII:231809-234267 3.67e-02 100 chrXI:158198-159567 6.36e-01 100 chrV:443034-443520 8.55e-11 7_[-3(5.80e-08)]_1_[-2(4.65e-10)]_\ 51 chrIV:1488923-1489971 9.68e-01 100 chrVII:363856-364421 9.96e-01 100 chrXIII:372142-372761 6.94e-10 52_[-1(4.63e-09)]_3_[-3(3.31e-08)]_\ 3 chrXIV:88920-89707 9.03e-01 100 chrXIII:123834-124712 2.97e-01 100 chrXII:656650-657202 8.23e-07 66_[-1(1.53e-10)]_13 chrVIII:133933-134727 5.35e-05 39_[+2(1.99e-07)]_41 chrXI:313170-313700 1.58e-05 24_[-1(1.60e-05)]_23_[-2(2.70e-06)]_\ 12 chrXII:167609-168249 5.99e-02 100 chrXIII:21-186 8.25e-01 100 chrXVI:280677-282990 6.53e-01 100 chrV:550934-551730 2.00e-18 11_[-1(2.36e-11)]_3_[-3(5.80e-08)]_\ 1_[-2(2.95e-10)]_23 chrXII:592348-593061 8.29e-01 100 chrIX:196996-197789 8.09e-01 100 chrXII:424136-424509 9.13e-01 100 chrVII:401342-401954 9.02e-01 100 chrXVI:435601-436197 7.19e-07 52_[-1(1.28e-07)]_3_[-3(2.08e-06)]_\ 3 chrVII:110424-110987 2.11e-03 22_[-2(2.70e-06)]_58 chrXIV:602080-602608 3.09e-18 16_[+2(4.65e-10)]_1_[+3(5.80e-08)]_\ 3_[+1(2.36e-11)]_18 chrVII:1000309-1000638 5.33e-01 100 chrXII:588710-589248 7.38e-01 100 chrII:165051-165441 2.24e-01 100 chrXII:1028177-1028621 8.17e-01 100 chrXV:976142-976728 1.06e-07 34_[+2(4.32e-06)]_24_[+1(3.51e-08)]_\ 1 chrVIII:358297-358841 8.69e-04 31_[-2(4.13e-07)]_49 chrVII:328365-329008 5.41e-01 100 chrXI:302491-303255 9.35e-01 100 chrXV:1027784-1029319 4.90e-01 100 chrIV:30-322 2.15e-01 100 chrXV:161090-161440 8.70e-01 100 chrII:413989-415956 9.60e-01 100 chrIV:129268-131052 9.97e-01 100 chrXII:710325-710907 2.54e-01 100 chrXVI:794393-796068 4.66e-01 100 chrX:139068-139168 9.92e-01 100 chrVII:13-1820 4.74e-01 100 chrXII:365548-366745 5.61e-01 100 chrXVI:581535-582436 7.15e-01 100 chrII:544542-544798 3.51e-01 100 chrXII:588310-588532 9.74e-01 100 chrIII:177034-178865 9.67e-01 100 chrIII:13938-16955 9.23e-01 100 chrXVI:879869-880814 3.09e-18 13_[-1(2.36e-11)]_3_[-3(5.80e-08)]_\ 1_[-2(4.65e-10)]_21 chrXIII:161933-162410 4.27e-01 100 chrXV:110847-111303 3.80e-01 100 chrXIII:195777-196444 4.44e-06 16_[-1(6.00e-10)]_63 chrV:117572-118363 9.57e-01 100 chrIV:654252-655004 1.00e+00 100 chrVII:343631-345233 7.31e-01 100 chrV:423100-425178 2.83e-01 100 chrIV:1354451-1356073 2.06e-01 100 chrIII:294580-295960 9.42e-01 100 chrXIII:5317-5750 5.15e-01 100 chrV:110452-110956 8.77e-01 100 chrXV:444872-446161 1.41e-01 2_[+2(6.31e-05)]_78 chrIV:802558-803052 9.01e-06 28_[-2(1.99e-07)]_52 chrXIII:747721-748282 2.38e-01 100 chrX:58679-58779 2.69e-05 56_[-1(2.45e-09)]_23 chrIX:2-230 9.08e-01 100 chrVI:210477-210930 2.38e-05 12_[-3(1.42e-06)]_2_[-2(5.01e-06)]_\ 45 chrVII:788052-788779 3.49e-01 100 chrIV:1018043-1018237 8.38e-01 100 chrXIII:861208-861432 7.10e-01 100 chrXV:896321-897115 9.89e-01 100 chrXI:83875-84439 4.21e-01 100 chrVII:878530-879140 1.60e-03 11_[-2(4.65e-06)]_69 chrX:702415-702515 8.46e-01 100 chrII:604069-607113 7.71e-01 100 chrXII:546045-547612 1.67e-02 51_[-1(6.55e-05)]_28 chrII:167551-168477 2.39e-02 49_[-3(1.84e-05)]_30 chrXIII:761268-762576 9.45e-01 100 chrXIV:499976-500808 6.62e-01 100 chrM:61095-61469 6.87e-01 100 chrVII:828435-829050 1.74e-09 39_[-1(5.28e-10)]_3_[-3(3.73e-07)]_\ 16 chrII:405528-406246 1.35e-07 39_[+2(7.99e-08)]_41 chrXII:10990-11991 3.21e-01 100 chrVI:167247-167721 2.44e-10 1_[+2(5.01e-06)]_2_[+3(1.42e-06)]_\ 17_[+1(1.93e-08)]_18 chrXII:282450-283816 6.63e-01 100 chrXV:677849-679235 9.08e-01 100 chrXI:0-1083 3.64e-03 56_[+2(2.93e-06)]_24 chrIX:370158-370785 2.05e-08 14_[+3(1.93e-06)]_2_[+1(3.76e-09)]_\ 42 chrVII:794125-794665 1.69e-05 70_[+2(4.70e-09)]_10 chrXI:140718-141476 7.73e-04 2_[-3(1.93e-06)]_77 chrII:60228-61385 7.79e-01 100 chrVIII:466710-467318 8.90e-12 24_[+2(2.51e-08)]_23_[+1(9.60e-08)]_\ 12 chrXIV:96001-96672 2.59e-04 7_[-2(3.76e-08)]_73 chrIV:1352326-1352776 9.35e-04 18_[-2(2.47e-07)]_62 chrXIII:650754-651903 9.99e-01 100 chrXIII:183668-184222 1.12e-10 11_[-1(1.13e-10)]_22_[-2(1.60e-07)]_\ 26 chrX:160006-160106 8.40e-01 100 chrVI:191288-191844 1.01e-07 57_[-3(9.33e-06)]_[-2(9.00e-08)]_2 chrVII:881986-883947 5.79e-01 100 chrX:453341-453441 3.72e-01 100 chrXVI:377960-379048 9.51e-01 100 chrXII:728308-728541 1.51e-01 100 chrIII:82213-82800 2.29e-09 14_[-1(3.76e-09)]_2_[-3(1.93e-06)]_\ 42 chrXIII:420335-420900 7.31e-15 29_[-1(4.63e-09)]_3_[-3(3.31e-08)]_\ 1_[-2(1.42e-08)]_5 chrII:87931-88573 2.93e-01 100 chrVII:700333-701299 9.47e-01 100 chrIV:1449745-1451462 6.34e-01 100 chrXII:687616-688239 1.44e-09 14_[-3(3.31e-08)]_1_[-2(1.42e-08)]_\ 44 chrXIII:162585-163979 1.61e-01 100 chrX:115382-115482 7.76e-01 100 chrIV:307957-309029 1.71e-01 100 chrIV:1075292-1075790 4.37e-04 13_[-3(6.16e-06)]_[-2(3.31e-05)]_46 chrX:607830-607930 7.55e-01 100 chrXV:226438-226954 4.77e-04 16_[-2(9.00e-08)]_64 chrXII:201690-202901 5.72e-01 100 chrXIV:302315-302675 8.39e-01 100 chrV:396152-397495 1.86e-01 100 chrIV:667752-668269 6.48e-12 55_[-1(2.36e-11)]_3_[-3(5.80e-08)] chrIX:299948-300765 7.29e-01 100 chrXIV:560500-561043 1.17e-09 4_[-3(2.19e-10)]_[-2(6.10e-07)]_55 chrXI:46443-47062 2.03e-10 41_[-1(1.56e-09)]_3_[-3(2.46e-08)]_\ 14 chrIII:68036-68641 2.94e-01 100 chrIV:411230-411690 1.13e-01 100 chrXVI:819194-820019 5.01e-07 16_[+1(2.36e-11)]_63 chrVII:254069-254730 2.04e-01 100 chrV:141094-141259 5.01e-01 100 chrI:229130-230193 2.39e-03 41_[-2(2.93e-06)]_39 chrII:266109-266722 2.71e-16 11_[+2(1.28e-07)]_[+3(2.19e-10)]_3_\ [+1(2.45e-09)]_24 chrXI:518984-521029 2.74e-01 100 chrXV:167921-168456 1.61e-01 100 chrXI:74405-74853 2.94e-08 43_[+2(1.99e-07)]_1_[+3(2.46e-08)]_\ 15 chrXII:875125-875714 4.48e-12 5_[+2(3.43e-06)]_[+3(1.21e-06)]_26_\ [+1(4.64e-10)]_7 chrIX:325499-326146 2.55e-05 18_[+1(2.45e-09)]_61 chrVIII:462033-462252 3.50e-01 100 chrXII:1064801-1065364 2.32e-01 100 chrXII:468764-468984 1.66e-03 57_[+2(5.54e-07)]_23 chrXVI:172796-174118 9.17e-01 100 chrV:469252-469681 2.98e-09 39_[+2(1.90e-08)]_1_[+3(3.31e-08)]_\ 19 chrIV:1401199-1403331 1.27e-01 100 chrI:166010-166785 9.39e-01 100 chrX:233689-233789 5.88e-01 100 chrV:486985-487840 7.33e-04 [-3(1.93e-06)]_79 chrXV:159253-160219 4.91e-01 100 chrIV:1461495-1462190 4.13e-04 18_[-2(1.01e-07)]_62 chrXIII:320962-321339 1.68e-10 55_[-1(1.53e-10)]_3_[-3(7.93e-07)] chrV:469867-470338 2.93e-01 100 chrIV:1062788-1063095 9.04e-01 100 chrII:254908-255737 2.21e-01 100 chrVII:371216-371520 1.00e-01 100 chrV:522601-523135 6.86e-02 100 chrVII:919824-920303 2.81e-01 100 chrXIV:715856-716613 9.53e-01 100 chrXVI:559988-560523 2.53e-08 1_[-1(1.12e-08)]_43_[-2(4.13e-07)]_\ 15 chrIV:1359256-1361153 4.51e-01 100 chrXVI:406116-407125 3.81e-01 100 chrXII:731873-732324 3.74e-08 40_[+2(2.88e-08)]_1_[+3(2.58e-06)]_\ 18 chrXV:339694-339892 3.94e-01 100 chrXIII:168557-169128 2.44e-10 1_[+2(5.01e-06)]_2_[+3(1.42e-06)]_\ 17_[+1(1.93e-08)]_18 chrVII:310429-312266 8.62e-01 100 chrIV:884147-884667 1.01e-05 2_[+2(2.18e-08)]_78 chrXII:498469-499918 7.69e-01 100 chrXV:300826-301462 1.68e-11 1_[+2(3.33e-09)]_53_[+1(6.00e-10)]_\ 5 chrXIII:872675-872945 3.56e-01 100 chrXI:617367-619280 5.58e-01 100 chrXVI:627352-627654 6.99e-01 100 chrXVI:55824-56560 3.26e-04 35_[-1(2.64e-07)]_44 chrVII:10024-10495 4.06e-01 100 chrIV:340212-341638 9.32e-01 100 chrVII:555104-557078 2.19e-01 100 chrXII:1051843-1052427 2.81e-10 18_[-3(5.80e-08)]_1_[-2(4.65e-10)]_\ 40 chrIX:232722-233072 6.37e-01 100 chrXIII:267868-268900 3.66e-01 100 chrVIII:62526-62994 1.40e-03 43_[+2(2.70e-06)]_37 chrXV:978809-979140 8.57e-02 100 chrVIII:105003-105568 2.19e-01 100 chrXV:881924-882983 6.62e-01 100 chrII:628346-628623 7.49e-01 100 chrVII:561387-561965 2.52e-05 77_[-3(4.12e-07)]_2 chrXIII:504615-505450 8.17e-01 100 chrIX:182571-183752 9.30e-01 100 chrV:69114-69321 1.39e-01 100 chrXIV:434594-434838 4.66e-01 100 chrXII:426897-427588 1.59e-01 100 chrXII:521969-523561 6.38e-01 100 chrVI:268439-270160 9.92e-01 100 chrVII:533478-533648 8.85e-01 100 chrIX:67929-69630 6.64e-01 100 chrVII:845078-845931 3.64e-01 100 chrIII:291643-293075 9.97e-01 100 chrX:378139-378239 1.53e-09 45_[+2(1.42e-08)]_1_[+3(3.31e-08)]_\ 13 chrXV:639125-639424 3.26e-01 100 chrXI:513203-513654 3.45e-02 6_[-2(5.41e-05)]_74 chrXII:262552-264149 9.28e-01 100 chrVII:730941-731434 7.40e-11 19_[+3(2.46e-08)]_3_[+1(1.93e-08)]_\ 36 chrXII:897639-899630 3.74e-01 100 chrXIII:302819-303103 7.56e-01 100 chrV:138221-140937 8.73e-02 38_[-1(4.01e-05)]_41 chrX:541078-541178 9.50e-01 100 chrXVI:731912-732358 3.39e-01 100 chrIV:357988-358478 9.70e-01 100 chrIV:578886-580926 4.11e-01 100 chrIV:359360-359879 4.48e-12 6_[+2(3.43e-06)]_[+3(1.21e-06)]_26_\ [+1(4.64e-10)]_6 chrII:642882-643242 1.82e-12 3_[-1(1.28e-07)]_23_[-2(2.79e-09)]_\ 33 chrVI:136979-137933 7.42e-01 100 chrII:347343-347938 8.06e-12 11_[+2(1.14e-07)]_1_[+3(1.76e-07)]_\ 18_[-1(1.79e-07)]_8 chrXVI:172354-172533 3.37e-01 100 chrXIII:378688-379633 8.14e-01 100 chrVI:204736-205615 3.73e-01 100 chrII:326549-327438 2.41e-01 100 chrXIV:6518-7172 6.45e-01 100 chrVII:276943-278751 2.52e-01 100 chrXVI:689238-689830 8.86e-04 79_[+2(3.04e-07)]_1 chrIV:538965-539224 1.02e-01 66_[+1(9.50e-05)]_13 chrVII:345875-346524 4.21e-01 100 chrXIII:731931-733521 4.75e-01 100 chrIII:58699-59028 7.42e-01 100 chrXVI:193207-194531 7.82e-01 100 chrVIII:353153-353620 5.79e-01 100 chrVIII:85063-85591 9.63e-15 29_[-1(4.63e-09)]_3_[-3(3.31e-08)]_\ 1_[-2(1.90e-08)]_5 chrVII:706923-707361 1.82e-12 24_[-1(1.28e-07)]_23_[-2(2.79e-09)]_\ 12 chrV:311780-312351 2.39e-17 16_[-1(1.98e-11)]_3_[-3(9.73e-08)]_\ [-2(2.79e-09)]_19 chrIV:835723-836288 1.82e-01 100 chrV:491917-492578 8.89e-01 100 chrXV:216222-216729 5.79e-02 100 chrXII:1017704-1019410 3.27e-01 100 chrX:424288-424388 6.31e-05 4_[-2(7.99e-08)]_76 chrIV:519510-520057 8.06e-12 8_[+2(1.14e-07)]_1_[+3(1.76e-07)]_\ 18_[-1(1.79e-07)]_11 chrVIII:451978-452998 4.09e-01 100 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1_[+3(3.73e-07)]_3_[+1(5.28e-10)]_\ 54 chrXVI:188433-189067 2.59e-01 100 chrIX:98762-100070 3.05e-01 100 chrV:13334-13646 5.99e-01 100 chrXIV:62176-63608 9.79e-01 100 chrXV:1003875-1004948 9.98e-01 100 chrXIV:546533-546779 5.65e-01 100 chrXII:198645-199630 4.61e-02 100 chrVI:223375-224170 2.75e-01 100 chrXVI:718397-719158 2.44e-01 100 chrXII:975639-976321 2.14e-04 61_[-1(1.93e-08)]_18 chrVIII:381465-383391 7.77e-01 100 chrXI:162120-162926 4.78e-14 22_[-1(5.28e-10)]_23_[-2(7.99e-08)]_\ 14 chrIV:1492029-1493112 1.93e-01 100 chrV:207099-207661 1.95e-05 25_[+2(3.43e-06)]_23_[+1(1.60e-05)]_\ 11 chrIX:257297-257808 5.54e-01 100 chrIV:1200790-1201318 3.56e-01 100 chrII:36145-36973 1.65e-02 41_[+2(8.88e-06)]_39 chrXVI:860022-860659 9.30e-01 100 chrVI:222992-223154 7.97e-01 100 chrIX:230869-231038 4.64e-01 100 chrXIII:768171-768672 1.24e-15 6_[-1(1.53e-10)]_3_[-3(7.93e-07)]_\ [-2(2.79e-09)]_29 chrXI:322431-322725 3.96e-01 100 chrVIII:488303-488570 1.45e-01 20_[-2(9.36e-05)]_60 chrX:517639-517739 7.52e-01 100 chrXIII:433504-433809 6.96e-01 100 chrXII:374194-374715 4.02e-01 100 chrIV:992576-993048 6.15e-04 68_[+2(9.00e-08)]_12 chrX:120775-120875 9.56e-01 100 chrXV:968101-968456 4.96e-01 100 chrXIII:652060-652864 7.18e-01 100 chrX:90005-90105 1.58e-02 77_[+1(3.59e-06)]_2 chrVIII:147608-149327 5.17e-01 100 chrVIII:79823-80668 2.13e-01 100 chrXIII:499046-501939 5.19e-01 100 chrIII:162172-163927 4.04e-01 100 chrXVI:622268-622864 8.58e-05 32_[-1(1.12e-08)]_47 chrXV:228051-228599 2.94e-08 54_[+2(1.99e-07)]_1_[+3(2.46e-08)]_\ 4 chrXVI:303254-304731 7.99e-01 100 chrXII:1039007-1040285 2.11e-01 100 chrVIII:132810-133389 1.62e-08 18_[-3(4.12e-07)]_[-2(1.42e-08)]_41 chrX:690545-690645 1.30e-03 11_[-2(8.87e-07)]_69 chrXIV:575148-575771 9.40e-01 100 chrXIII:549810-552158 4.59e-01 100 chrI:138767-139368 6.07e-01 100 chrXIV:546935-547417 1.47e-06 40_[+1(6.00e-10)]_39 chrII:181267-181694 9.15e-01 100 chrXII:637089-640282 1.00e-01 75_[+1(7.67e-05)]_4 chrX:374210-374310 5.56e-08 25_[-2(5.41e-05)]_18_[-1(5.28e-10)]_\ 16 chrXV:113302-114415 4.38e-12 12_[+3(2.19e-10)]_3_[+1(2.45e-09)]_\ 43 chrXV:980436-981046 4.08e-06 66_[+1(6.00e-10)]_13 chrVII:661322-662192 1.59e-07 40_[+2(3.29e-08)]_40 chrXIII:352032-352532 1.11e-03 46_[+2(4.13e-07)]_34 chrXIV:783340-784323 1.95e-01 100 chrII:373197-375857 7.08e-01 100 chrXII:605134-605655 1.25e-05 69_[-2(2.18e-08)]_11 chrX:651186-651286 4.94e-01 100 chrXVI:743741-744725 1.04e-01 100 chrVII:319596-320158 2.60e-01 100 chrXV:925157-925405 4.55e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************