Invoking: getsize /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.014013 Invoking: fasta-most -min 50 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.055765 Invoking: fasta-center -dna -len 100 < /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.07179 Invoking: fasta-shuffle-letters /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/seqs-centered /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/seqs-shuffled -kmer 2 -tag -dinuc -dna -seed 1 Finished invoke: name: shuffle_seqs status: 0 time: 0.012276 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background Finished invoke: name: bg status: 0 time: 0.012284 Invoking: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -dna -revcomp -nostatus Finished invoke: name: meme status: 0 time: 798.695119 Invoking: dreme -v 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out -png -dna -p /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/seqs-centered -n /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/seqs-shuffled Finished invoke: name: dreme status: 0 time: 63.294613 Invoking: centrimo -seqlen 520 -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/centrimo_out -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: centrimo status: 0 time: 0.158345 Invoking: tomtom -verbosity 1 -text -thresh 0.1 /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/combined.meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/combined.meme 1> /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/motif_alignment.txt Finished invoke: name: align status: 0 time: 0.704467 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_1 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary RTCVBSGGTTCGATYCCSVKHKDG /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo1 status: 0 time: 0.652921 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_2 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary NSSCTYWAMCCACTRVRCYAHVNRVSC /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo2 status: 0 time: 0.670645 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_3 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary KGKTAAGGCGYMWGACTNBTAATCWSWAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo3 status: 0 time: 0.420347 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_4 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary AAAAAWAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo4 status: 0 time: 0.504391 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_5 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary CABACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo5 status: 0 time: 0.279515 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_6 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary CGSCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo6 status: 0 time: 0.391416 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_7 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary ACCCABAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo7 status: 0 time: 0.247085 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_8 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary GYGCCAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo8 status: 0 time: 0.267398 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_9 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo9 status: 0 time: 0.302218 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_10 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary TGTTGWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo10 status: 0 time: 0.333962 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_11 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary CCAACWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo11 status: 0 time: 0.242236 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_12 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary CCRTGGAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo12 status: 0 time: 0.259704 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_13 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary GGTCAGAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo13 status: 0 time: 0.268349 Invoking: spamo -verbosity 1 -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/spamo_out_14 -bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -primary TCKCAAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml Finished invoke: name: spamo14 status: 0 time: 0.211223 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_1 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif RTCVBSGGTTCGATYCCSVKHKDG /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo1 status: 0 time: 0.262168 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_2 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif NSSCTYWAMCCACTRVRCYAHVNRVSC /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo2 status: 0 time: 0.26514 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_3 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif KGKTAAGGCGYMWGACTNBTAATCWSWAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out/meme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo3 status: 0 time: 0.268548 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_4 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif AAAAAWAW /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo4 status: 0 time: 0.170349 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_5 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif CABACGC /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo5 status: 0 time: 0.16261 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_6 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif CGSCCA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo6 status: 0 time: 0.160713 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_7 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif ACCCABAC /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo7 status: 0 time: 0.172526 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_8 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif GYGCCAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo8 status: 0 time: 0.166645 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_9 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif ATGGCAWC /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo9 status: 0 time: 0.166258 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_10 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif TGTTGWA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo10 status: 0 time: 0.149134 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_11 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif CCAACWGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo11 status: 0 time: 0.170617 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_12 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif CCRTGGAG /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo12 status: 0 time: 0.166865 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_13 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif GGTCAGAA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo13 status: 0 time: 0.164936 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/fimo_out_14 --bgfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background --motif TCKCAAGA /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/dreme_out/dreme.xml /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/BY4742--RIM101.fa Finished invoke: name: fimo14 status: 0 time: 0.165706 Writing output Invoking: meme-chip_html_to_tsv /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme-chip.html /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/summary.tsv Finished invoke: name: summary status: 0 time: 0.15985 Done