******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrI:1-1134 1.0000 100 chrI:71796-73668 1.0000 100 chrI:81880-82346 1.0000 100 chrI:138917-139361 1.0000 100 chrI:166042-166587 1.0000 100 chrI:180926-181487 1.0000 100 chrI:182355-182776 1.0000 100 chrI:229100-230196 1.0000 100 chrII:9369-10014 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chrIII:82363-82752 1.0000 100 chrIII:123364-123835 1.0000 100 chrIII:127503-127916 1.0000 100 chrIII:142243-143130 1.0000 100 chrIII:163435-163910 1.0000 100 chrIII:168120-168592 1.0000 100 chrIII:177075-178811 1.0000 100 chrIII:227745-228222 1.0000 100 chrIII:236449-236665 1.0000 100 chrIII:262602-263043 1.0000 100 chrIII:294909-295927 1.0000 100 chrIII:315621-316620 1.0000 100 chrIV:7-388 1.0000 100 chrIV:83326-83829 1.0000 100 chrIV:117113-118183 1.0000 100 chrIV:129959-131000 1.0000 100 chrIV:216688-218057 1.0000 100 chrIV:221432-222362 1.0000 100 chrIV:229420-230744 1.0000 100 chrIV:307989-308684 1.0000 100 chrIV:321603-322000 1.0000 100 chrIV:340408-341927 1.0000 100 chrIV:358046-358456 1.0000 100 chrIV:359370-359840 1.0000 100 chrIV:392587-392835 1.0000 100 chrIV:410165-410749 1.0000 100 chrIV:411209-411692 1.0000 100 chrIV:434042-434546 1.0000 100 chrIV:437547-438021 1.0000 100 chrIV:488432-489157 1.0000 100 chrIV:490288-492612 1.0000 100 chrIV:519543-519961 1.0000 100 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chrXVI:172823-174115 1.0000 100 chrXVI:188342-188961 1.0000 100 chrXVI:209695-210537 1.0000 100 chrXVI:279947-280262 1.0000 100 chrXVI:280619-282957 1.0000 100 chrXVI:302498-303048 1.0000 100 chrXVI:338677-339132 1.0000 100 chrXVI:340411-340827 1.0000 100 chrXVI:378599-379030 1.0000 100 chrXVI:404467-405711 1.0000 100 chrXVI:406186-407759 1.0000 100 chrXVI:435552-436187 1.0000 100 chrXVI:520034-520567 1.0000 100 chrXVI:559992-560480 1.0000 100 chrXVI:572017-572564 1.0000 100 chrXVI:575192-575629 1.0000 100 chrXVI:581823-582424 1.0000 100 chrXVI:622359-622829 1.0000 100 chrXVI:627269-627708 1.0000 100 chrXVI:653822-655039 1.0000 100 chrXVI:689369-689879 1.0000 100 chrXVI:699904-700685 1.0000 100 chrXVI:731644-732332 1.0000 100 chrXVI:744074-744587 1.0000 100 chrXVI:768998-769491 1.0000 100 chrXVI:775625-776109 1.0000 100 chrXVI:794471-796066 1.0000 100 chrXVI:810470-811010 1.0000 100 chrXVI:819168-819826 1.0000 100 chrXVI:856745-857143 1.0000 100 chrXVI:860162-860672 1.0000 100 chrXVI:879908-880560 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/seqs-centered -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 551 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 55100 N= 551 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.291 C 0.209 G 0.209 T 0.291 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--RIM101/background): A 0.310 C 0.190 G 0.190 T 0.310 ******************************************************************************** ******************************************************************************** MOTIF RTCVBSGGTTCGATYCCSVKHKDG MEME-1 width = 24 sites = 134 llr = 2237 E-value = 8.7e-469 ******************************************************************************** -------------------------------------------------------------------------------- Motif RTCVBSGGTTCGATYCCSVKHKDG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 32:3:12::::3a2::::3:3121 pos.-specific C 118554::::a::24a75324211 probability G 61:2358a:::7:2:::455:445 matrix T :62:31::aa:::46:21:33222 bits 2.4 * * * 2.2 * * * 1.9 * * * 1.7 **** * * Relative 1.4 * ****** * Entropy 1.2 * ******* ** (24.1 bits) 1.0 * ******* *** 0.7 * * * ******* ***** 0.5 * *********** ******* * 0.2 ************* ********** 0.0 ------------------------ Multilevel GTCCCGGGTTCGATTCCCGGCGGG consensus A TATC A GC TGATTTT sequence GG C A A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTCVBSGGTTCGATYCCSVKHKDG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------ chrIII:123364-123835 - 32 4.58e-13 GGTGCGGGAG GTCCCGGGTTCGAGTCCCGGCTCG CCCCACATTG chrXVI:860162-860672 + 55 8.31e-12 CCATCGTTGG GCCCCCGGTTCGATTCCGGGCTTG CGCAGATTTT chrXVI:572017-572564 + 72 8.31e-12 CCATCGTTGG GCCCCCGGTTCGATTCCGGGCTTG CGCAA chrXV:281957-282470 + 44 8.31e-12 CCATCGTTGG GCCCCCGGTTCGATTCCGGGCTTG CGCATTTCTT chrXV:226420-226896 - 7 8.31e-12 CCATCGTTGG GCCCCCGGTTCGATTCCGGGCTTG CGCAAA chrX:531608-532195 + 20 8.31e-12 CCATCGTTGG GCCCCCGGTTCGATTCCGGGCTTG CGCAGTTTCT chrVII:930746-931245 - 12 8.31e-12 CCATCGTTGG GCCCCCGGTTCGATTCCGGGCTTG CGCATTTTTT chrVI:180641-181283 - 66 8.31e-12 CCATCGTTGG GCCCCCGGTTCGATTCCGGGCTTG CGCAGTCCTT chrVI:162007-162489 + 73 8.31e-12 CCATCGTTGG GCCCCCGGTTCGATTCCGGGCTTG CGCA chrIV:83326-83829 + 64 8.31e-12 CCATCGTTGG GCCCCCGGTTCGATTCCGGGCTTG CGCAAGTTTA chrIII:142243-143130 - 69 8.31e-12 ATCGTTGG GCCCCCGGTTCGATTCCGGGCTTG CGCATCTTTT chrXII:214701-215166 - 4 1.05e-10 CAAGGAAGAG GTCATCGGTTCGATTCCGGTTGCG TCC chrV:311734-312308 - 56 1.05e-10 CAAGGAAGAG GTCATCGGTTCGATTCCGGTTGCG TCCAATGAAA chrI:166042-166587 + 48 1.05e-10 CAAGGAAGAG GTCATCGGTTCGATTCCGGTTGCG TCCAAATTTT chrVIII:475501-475917 - 51 1.48e-10 CACGGCAAAG GTCCCGAGTTCGATCCTCGGTTGG AACATTTTAA chrVIII:134088-134633 + 55 3.38e-10 TGATCCGGAC AACCCCGGTTCGAATCCGGGTAGG ACCTTTTTTT chrV:250103-250515 + 71 3.38e-10 TGATCCGGAC AACCCCGGTTCGAATCCGGGTAGG ACCTTT chrIV:1016965-1017503 - 27 3.38e-10 TCACCGTGGA GACCGGGGTTCGACTCCCCGCTTC GGAGTTTCTT chrIV:644884-645407 - 62 3.38e-10 TGATCCGGAC AACCCCGGTTCGAATCCGGGTAGG ACCTTTTTTA chrIV:520690-521334 + 54 3.38e-10 TGATCCGGAC AACCCCGGTTCGAATCCGGGTAGG ACCTTTTCTA chrXIII:807998-808547 - 28 3.95e-10 TGATCCGAAC AACCCCAGTTCGAATCCGGGTGGG ACCTTCCCTT chrX:233703-234262 + 52 4.61e-10 GAACCAGGAG ATTCCAGGTTCGAGTCCTGGCGGG GAAGAATATT chrXIV:569670-570152 - 10 5.38e-10 TAACGCGGGG ATCAGCGGTTCGATCCCGCTAGAG ACCATTCTT chrIX:210507-210963 + 26 5.38e-10 TAACGCGGGG ATCAGCGGTTCGATCCCGCTAGAG ACCATATTTT chrII:197220-197878 + 41 5.38e-10 TAACGCGGGG ATCAGCGGTTCGATCCCGCTAGAG ACCATTTTTT chrXIII:290589-291130 + 36 6.26e-10 TCACCGTGGA GACCGGGGTTCGACTCCCCGTAGC GGAGTTTTCT chrXVI:768998-769491 - 17 9.73e-10 ATACCGAAAT GTCAGGGGTTCGAGCCCCCTATGA GGAGTTCTTT chrXV:663480-664137 - 58 9.73e-10 CACGCAGAAC GTCCCCAGTTCGATCCTGGGCGAA ATCGTTTTTA chrXV:438456-439031 + 18 9.73e-10 ATACCGAAAT GTCAGGGGTTCGAGCCCCCTATGA GGAGTTCTTT chrXIII:586412-586902 - 33 9.73e-10 CACGCAGAAC GTCCCCAGTTCGATCCTGGGCGAA ATCATTTTTT chrXIII:420316-420865 - 52 9.73e-10 CACGCAGAAC GTCCCCAGTTCGATCCTGGGCGAA ATCATTTTTA chrXIII:372190-372720 - 44 9.73e-10 CACGCAGAAC GTCCCCAGTTCGATCCTGGGCGAA ATCATTTTTT chrXII:875169-875676 + 72 9.73e-10 ATACCGAAAT GTCAGGGGTTCGAGCCCCCTATGA GGAGT chrXII:687644-688171 - 6 9.73e-10 CACGCAGAAC GTCCCCAGTTCGATCCTGGGCGAA ATCAT chrXI:578763-579346 + 29 9.73e-10 ATACCGAAAT GTCAGGGGTTCGAGCCCCCTATGA GGAGTTCTTT chrXI:379452-379966 + 67 9.73e-10 CACGCAGAAC GTCCCCAGTTCGATCCTGGGCGAA ATCAATTAAT chrVIII:85081-85561 - 31 9.73e-10 CACGCAGAAC GTCCCCAGTTCGATCCTGGGCGAA ATCAATTTTT chrVII:73594-74114 - 29 9.73e-10 CACGCAGAAC GTCCCCAGTTCGATCCTGGGCGAA ATCATTATTT chrV:438491-438982 + 60 9.73e-10 CACGCAGAAC GTCCCCAGTTCGATCCTGGGCGAA ATCAATTTTT chrXV:980506-981024 + 45 1.12e-09 CATGCGAGAG GCCCTGGGTTCAATTCCCAGCTCG CCCCTTTTTT chrXV:300865-301432 + 73 1.12e-09 CATGCGAGAG GCCCTGGGTTCAATTCCCAGCTCG CCCC chrXIV:567886-568558 + 18 1.12e-09 CATGCGAGAG GCCCTGGGTTCAATTCCCAGCTCG CCCCTTTATA chrXIV:546946-547416 + 38 1.12e-09 CATGCGAGAG GCCCTGGGTTCAATTCCCAGCTCG CCCCGTTATC chrV:130827-131384 - 31 1.48e-09 TGATCCGAAC AACCCCGGTTCGAATCCGGGTAAG ACCTATTTTT chrII:350610-351133 + 50 1.48e-09 TGATCCGGAC AACCCCGGTTCGAATCCGGGTAAG ACCTTATTTT chrX:538338-538826 + 67 1.70e-09 TAAGGAGAAG ACTGCGGGTTCGAGTCCCGTACGG AACGTTGATT chrIV:488432-489157 - 57 1.95e-09 CACGGCGAAG ATCCCGAGTTCGAACCTCGGTTGG ATCAGAATCT chrXI:140785-141291 - 34 2.23e-09 TCACCGTGGA GACCGGGGTTCGACTCCCCGTATC GGAGTTTTCA chrVII:541609-542190 + 45 2.23e-09 TCACCGTGGA GACCGGGGTTCGACTCCCCGTATC GGAGTGTTCT chrV:487070-487616 - 42 2.23e-09 TCACCGTGGA GACCGGGGTTCGACTCCCCGTATC GGAGTATTCG chrV:176879-177407 + 50 2.23e-09 TCACCGTGGA GACCGGGGTTCGACTCCCCGTATC GGAGTACTTT chrII:644953-645430 + 70 2.23e-09 TCACCGTGGA GACCGGGGTTCGACTCCCCGTATC GGAGTTA chrXVI:581823-582424 + 34 2.54e-09 TAATCATAAG GTTAGGGGTTCGAGCCCCCTACAG GGCTTTCTTT chrXIII:480396-480872 - 41 2.54e-09 TAATCATAAG GTTAGGGGTTCGAGCCCCCTACAG GGCTTCTTTT chrXI:202822-203310 + 28 2.54e-09 TAATCATAAG GTTAGGGGTTCGAGCCCCCTACAG GGCTTTCTTT chrX:414779-415267 + 38 2.54e-09 TAATCATAAG GTTAGGGGTTCGAGCCCCCTACAG GGCTAATATT chrVII:876178-876674 + 63 2.54e-09 TAATCATAAG GTTAGGGGTTCGAGCCCCCTACAG GGCTTTCTTT chrVII:122032-122636 + 30 2.54e-09 TAATCATAAG GTTAGGGGTTCGAGCCCCCTACAG GGCTATTCTT chrVI:226448-226990 - 23 2.54e-09 TAATCATAAG GTTAGGGGTTCGAGCCCCCTACAG GGCTTATCTC chrV:135136-135687 - 68 2.54e-09 AATCATAAG GTTAGGGGTTCGAGCCCCCTACAG GGCTTTCTTT chrIX:300011-300504 - 25 2.54e-09 TAATCATAAG GTTAGGGGTTCGAGCCCCCTACAG GGCTATCTTT chrIV:1352293-1352739 - 4 2.54e-09 TAATCATAAG GTTAGGGGTTCGAGCCCCCTACAG GGC chrIV:1201502-1202086 + 51 2.54e-09 TAATCATAAG GTTAGGGGTTCGAGCCCCCTACAG GGCTAATAAC chrXII:374199-374638 + 32 2.90e-09 GAACCAGAAG ATTCCAGGTTCAAGTCCTGGCGGG GAAGATTTTT chrXI:490758-491230 + 69 2.90e-09 GAACCAGAAG ATTCCAGGTTCAAGTCCTGGCGGG GAAGAATT chrIV:619691-620266 - 45 2.90e-09 GAACCAGAAG ATTCCAGGTTCAAGTCCTGGCGGG GAAGATTTTT chrXIII:131608-132109 - 21 3.30e-09 TAATCAGAAG ATTATGGGTTCGACCCCCATCGTG AGTGCTTTGT chrXI:162246-162748 - 44 3.30e-09 TAATCAGAAG ATTATGGGTTCGACCCCCATCGTG AGTGTTTTTT chrX:374192-374788 - 70 3.30e-09 TCAGAAG ATTATGGGTTCGACCCCCATCGTG AGTGCTTTGT chrVII:828449-828999 - 53 3.30e-09 TAATCAGAAG ATTATGGGTTCGACCCCCATCGTG AGTGCTTTTT chrVII:736178-736551 + 70 3.30e-09 TAATCAGAAG ATTATGGGTTCGACCCCCATCGTG AGTGTTG chrVII:405264-405799 + 33 3.30e-09 TAATCAGAAG ATTATGGGTTCGACCCCCATCGTG AGTGCTTTTT chrII:405596-406211 + 69 3.30e-09 TAATCAGAAG ATTATGGGTTCGACCCCCATCGTG AGTGCTTT chrXI:46486-47014 - 39 3.74e-09 TAATGCGGGG ATCGTGGGTTCAATTCCCACAGAG GGCATTTGAA chrXVI:856745-857143 + 53 5.42e-09 CATGGGAGAG GTCTCCGGTTCGATTCCGGACTCG TCCATTTTAA chrXIII:768179-768641 - 13 5.42e-09 CATGGGAGAG GTCTCCGGTTCGATTCCGGACTCG TCCAAATTTT chrXIII:463313-463908 + 38 5.42e-09 TCGCGTGCCA GATCGGGGTTCAATTCCCCGTCGC GGAGATTTTT chrXIII:320933-321333 - 68 5.42e-09 ATGGGAGAG GTCTCCGGTTCGATTCCGGACTCG TCCATTTTTT chrXII:656733-657199 - 22 5.42e-09 CATGGGAGAG GTCTCCGGTTCGATTCCGGACTCG TCCAAGTAAA chrXII:426881-427493 + 39 5.42e-09 TCGCGTGCCA GATCGGGGTTCAATTCCCCGTCGC GGAGAATTTT chrX:541338-541797 + 35 5.42e-09 TCGCGTGCCA GATCGGGGTTCAATTCCCCGTCGC GGAGATTTTT chrX:355130-355882 + 44 5.42e-09 TCGCGTGCCA GATCGGGGTTCAATTCCCCGTCGC GGAGATTTTT chrX:204529-205063 + 33 5.42e-09 TCGCGTGCCA GATCGGGGTTCAATTCCCCGTCGC GGAGATTTTT chrVII:774089-774702 + 49 5.42e-09 CATGGGAGAG GTCTCCGGTTCGATTCCGGACTCG TCCAAATTTT chrIX:336116-336636 - 27 5.42e-09 TCGCGTGCCA GATCGGGGTTCAATTCCCCGTCGC GGAGATTTTT chrIV:410165-410749 + 17 5.42e-09 CATGGGAGAG GTCTCCGGTTCGATTCCGGACTCG TCCAAATTAT chrVII:706923-707342 - 30 3.14e-08 AAATCTGTTG GTCCTTAGTTCGATCCTGAGTGCG AGCTTTTTAT chrXV:353841-354328 - 11 3.47e-08 TAATGTGGAG ATCATCGGTTCAAATCCGATTGGA AGCATTTTTT chrXIV:104611-105126 + 32 3.47e-08 TAATGTGGAG ATCATCGGTTCAAATCCGATTGGA AGCATATTAT chrVIII:115877-116400 - 23 3.47e-08 TAATGTGGAG ATCATCGGTTCAAATCCGATTGGA AGCATTTTTT chrIX:325512-326108 + 33 3.47e-08 TAATGTGGAG ATCATCGGTTCAAATCCGATTGGA AGCAATTTTT chrIX:174822-175355 + 38 3.47e-08 TAATGTGGAG ATCATCGGTTCAAATCCGATTGGA AGCAATTTTT chrIV:434042-434546 - 24 3.47e-08 TAATGTGGAG ATCATCGGTTCAAATCCGATTGGA AGCATATTTT chrII:266178-266683 + 43 3.47e-08 TAATGTGGAG ATCATCGGTTCAAATCCGATTGGA AGCATTTTTT chrXVI:55842-56505 - 50 4.22e-08 CAATCGAAGG GTTGCAGGTTCAATTCCTGTCCGT TTCAATTAAT chrXIII:379048-379647 - 10 4.22e-08 CAATCGAAGG GTTGCAGGTTCAATTCCTGTCCGT TTCAATTTA chrXI:302706-303263 + 62 4.22e-08 CAATCGAAGG GTTGCAGGTTCAATTCCTGTCCGT TTCATTTTCT chrVII:287113-287667 - 14 4.22e-08 CAATCGAAGG GTTGCAGGTTCAATTCCTGTCCGT TTCATTTTTT chrXVI:810470-811010 + 32 5.59e-08 TAATCGCAAG ATCGTGAGTTCAACCCTCACTGGG GTCGTATTTT chrXV:487218-487752 + 50 5.59e-08 TAATCGCAAG ATCGTGAGTTCAACCCTCACTGGG GTCGTTAATT chrXV:228107-228600 + 74 5.59e-08 TAATCGCAAG ATCGTGAGTTCAACCCTCACTGGG GTC chrXIV:632405-632902 + 42 5.59e-08 TAATCGCAAG ATCGTGAGTTCAACCCTCACTGGG GTCGTTTTTT chrXII:975750-976249 - 38 5.59e-08 TAATCGCAAG ATCGTGAGTTCAACCCTCACTGGG GTCGTTTATT chrXI:74418-74949 + 37 5.59e-08 TAATCGCAAG ATCGTGAGTTCAACCCTCACTGGG GTCGCTTATT chrVII:730945-731455 + 33 5.59e-08 TAATCGCAAG ATCGTGAGTTCAACCCTCACTGGG GTCGTTTTTT chrXIII:258938-259443 - 22 1.46e-07 GGGCTTTGCC CGCGCAGGTTCGAGTCCTGCAGTT GTCGTTATTT chrXIII:168611-169072 + 65 1.46e-07 AAATCTTGAG ATCGGGCGTTCGACTCGCCCCCGG GAGATATTTT chrX:354032-354573 + 53 1.46e-07 AAATCTTGAG ATCGGGCGTTCGACTCGCCCCCGG GAGATTTTTT chrVII:561439-561950 - 22 1.46e-07 GGGCTTTGCC CGCGCAGGTTCGAGTCCTGCAGTT GTCGTTATTT chrIV:1305398-1306002 + 35 1.46e-07 GGCTTTGGCC CGCGCAGGTTCGAGTCCTGCAGTT GTCGTTATTT chrIV:980754-981271 - 16 1.46e-07 GGGCTTTGCC CGCGCAGGTTCGAGTCCTGCAGTT GTCGTTTTTA chrIV:946128-946624 + 47 1.46e-07 AAATCTTGAG ATCGGGCGTTCGACTCGCCCCCGG GAGATTTTTT chrII:226864-227375 + 60 1.46e-07 GGGCTTTGCC CGCGCAGGTTCGAGTCCTGCAGTT GTCGTTATTT chrI:182355-182776 - 11 1.46e-07 GGGCTTTGCC CGCGCAGGTTCGAGTCCTGCAGTT GTCGTTATTT chrIV:1175594-1176106 + 74 1.85e-07 TAATCTGAAG GTCGAGAGTTCGAACCTCCCCTGG AGC chrXV:710003-710497 + 45 2.16e-07 TAACCCTGAT GTCCTCGGATCGAAACCGAGCGGC GCTAATTTTT chrXI:313172-313658 - 40 2.16e-07 TGGCCGATGA AACCCTGGTTCGATTCTAGGAGAT GGCATTTTAT chrX:517644-518074 - 8 2.16e-07 TAACCCTGAT GTCCTCGGATCGAAACCGAGCGGC GCTAAGC chrVII:319577-320128 + 23 2.16e-07 TGGCCGATGA AACCCTGGTTCGATTCTAGGAGAT GGCATTTTTT chrVII:110384-110927 - 24 2.16e-07 TGGCCGATGA AACCCTGGTTCGATTCTAGGAGAT GGCAATTTTT chrV:434376-434768 - 23 2.16e-07 TGGCCGATGA AACCCTGGTTCGATTCTAGGAGAT GGCATTTTCT chrV:207122-207658 + 61 2.16e-07 TGGCCGATGA AACCCTGGTTCGATTCTAGGAGAT GGCATATTTA chrXVI:744074-744587 + 48 3.89e-07 TAATGCAAAG GTCGTTAGTTCAATTCTGACAGGT GGCAAAATTT chrVII:661542-662002 + 71 3.89e-07 TAATGCAAAG GTCGTTAGTTCAATTCTGACAGGT GGCATA chrXVI:689369-689879 + 45 4.47e-07 GGGCTCTGCC CGCGCTGGTTCAAATCCTGCTGGT GTCGTATTAT chrV:288214-288715 - 33 4.47e-07 GGGCTCTGCC CGCGCTGGTTCAAATCCTGCTGGT GTCGTTTTTT chrXIV:725899-726407 - 35 5.12e-07 GACGGTTGTC CGCGCGAGTTCGAACCTCGCATCC TTCAGTATTT chrII:347400-347898 + 60 5.12e-07 GACGGTTGTC CGCGCGAGTTCGAACCTCGCATCC TTCAGTAATA chrXV:274445-275010 + 69 5.84e-07 GGGTTTTACC TGCGCAGGTTCGAATCCTGTCTGT GACGCATT chrVI:191310-191812 - 6 5.84e-07 GGGTTTTACC TGCGCAGGTTCGAATCCTGTCTGT GACGC chrXVI:559992-560480 - 16 7.55e-07 TTATCTGGAG GTCCTGTGTTCGATCCACAGAATT CGCATTTCTA chrXIII:352089-352585 + 56 7.55e-07 TTATCTGGAG GTCCTGTGTTCGATCCACAGAATT CGCATTAATT chrVII:440313-441205 - 11 7.55e-07 TTATCTGGAG GTCCTGTGTTCGATCCACAGAATT CGCATAATAA chrVI:157691-158223 - 13 7.55e-07 TTATCTGGAG GTCCTGTGTTCGATCCACAGAATT CGCATTCATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTCVBSGGTTCGATYCCSVKHKDG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123364-123835 4.6e-13 31_[-1]_45 chrXVI:860162-860672 8.3e-12 54_[+1]_22 chrXVI:572017-572564 8.3e-12 71_[+1]_5 chrXV:281957-282470 8.3e-12 43_[+1]_33 chrXV:226420-226896 8.3e-12 6_[-1]_70 chrX:531608-532195 8.3e-12 19_[+1]_57 chrVII:930746-931245 8.3e-12 11_[-1]_65 chrVI:180641-181283 8.3e-12 65_[-1]_11 chrVI:162007-162489 8.3e-12 72_[+1]_4 chrIV:83326-83829 8.3e-12 63_[+1]_13 chrIII:142243-143130 8.3e-12 68_[-1]_8 chrXII:214701-215166 1e-10 3_[-1]_73 chrV:311734-312308 1e-10 55_[-1]_21 chrI:166042-166587 1e-10 47_[+1]_29 chrVIII:475501-475917 1.5e-10 50_[-1]_26 chrVIII:134088-134633 3.4e-10 54_[+1]_22 chrV:250103-250515 3.4e-10 70_[+1]_6 chrIV:1016965-1017503 3.4e-10 26_[-1]_50 chrIV:644884-645407 3.4e-10 61_[-1]_15 chrIV:520690-521334 3.4e-10 53_[+1]_23 chrXIII:807998-808547 3.9e-10 27_[-1]_49 chrX:233703-234262 4.6e-10 51_[+1]_25 chrXIV:569670-570152 5.4e-10 9_[-1]_67 chrIX:210507-210963 5.4e-10 25_[+1]_51 chrII:197220-197878 5.4e-10 40_[+1]_36 chrXIII:290589-291130 6.3e-10 35_[+1]_41 chrXVI:768998-769491 9.7e-10 16_[-1]_60 chrXV:663480-664137 9.7e-10 57_[-1]_19 chrXV:438456-439031 9.7e-10 17_[+1]_59 chrXIII:586412-586902 9.7e-10 32_[-1]_44 chrXIII:420316-420865 9.7e-10 51_[-1]_25 chrXIII:372190-372720 9.7e-10 43_[-1]_33 chrXII:875169-875676 9.7e-10 71_[+1]_5 chrXII:687644-688171 9.7e-10 5_[-1]_71 chrXI:578763-579346 9.7e-10 28_[+1]_48 chrXI:379452-379966 9.7e-10 66_[+1]_10 chrVIII:85081-85561 9.7e-10 30_[-1]_46 chrVII:73594-74114 9.7e-10 28_[-1]_48 chrV:438491-438982 9.7e-10 59_[+1]_17 chrXV:980506-981024 1.1e-09 44_[+1]_32 chrXV:300865-301432 1.1e-09 72_[+1]_4 chrXIV:567886-568558 1.1e-09 17_[+1]_59 chrXIV:546946-547416 1.1e-09 37_[+1]_39 chrV:130827-131384 1.5e-09 30_[-1]_46 chrII:350610-351133 1.5e-09 49_[+1]_27 chrX:538338-538826 1.7e-09 66_[+1]_10 chrIV:488432-489157 2e-09 56_[-1]_20 chrXI:140785-141291 2.2e-09 33_[-1]_43 chrVII:541609-542190 2.2e-09 44_[+1]_32 chrV:487070-487616 2.2e-09 41_[-1]_35 chrV:176879-177407 2.2e-09 49_[+1]_27 chrII:644953-645430 2.2e-09 69_[+1]_7 chrXVI:581823-582424 2.5e-09 33_[+1]_43 chrXIII:480396-480872 2.5e-09 40_[-1]_36 chrXI:202822-203310 2.5e-09 27_[+1]_49 chrX:414779-415267 2.5e-09 37_[+1]_39 chrVII:876178-876674 2.5e-09 62_[+1]_14 chrVII:122032-122636 2.5e-09 29_[+1]_47 chrVI:226448-226990 2.5e-09 22_[-1]_54 chrV:135136-135687 2.5e-09 67_[-1]_9 chrIX:300011-300504 2.5e-09 24_[-1]_52 chrIV:1352293-1352739 2.5e-09 3_[-1]_73 chrIV:1201502-1202086 2.5e-09 50_[+1]_26 chrXII:374199-374638 2.9e-09 31_[+1]_45 chrXI:490758-491230 2.9e-09 68_[+1]_8 chrIV:619691-620266 2.9e-09 44_[-1]_32 chrXIII:131608-132109 3.3e-09 20_[-1]_56 chrXI:162246-162748 3.3e-09 43_[-1]_33 chrX:374192-374788 3.3e-09 69_[-1]_7 chrVII:828449-828999 3.3e-09 52_[-1]_24 chrVII:736178-736551 3.3e-09 69_[+1]_7 chrVII:405264-405799 3.3e-09 32_[+1]_44 chrII:405596-406211 3.3e-09 68_[+1]_8 chrXI:46486-47014 3.7e-09 38_[-1]_38 chrXVI:856745-857143 5.4e-09 52_[+1]_24 chrXIII:768179-768641 5.4e-09 12_[-1]_64 chrXIII:463313-463908 5.4e-09 37_[+1]_39 chrXIII:320933-321333 5.4e-09 67_[-1]_9 chrXII:656733-657199 5.4e-09 21_[-1]_55 chrXII:426881-427493 5.4e-09 38_[+1]_38 chrX:541338-541797 5.4e-09 34_[+1]_42 chrX:355130-355882 5.4e-09 43_[+1]_33 chrX:204529-205063 5.4e-09 32_[+1]_44 chrVII:774089-774702 5.4e-09 48_[+1]_28 chrIX:336116-336636 5.4e-09 26_[-1]_50 chrIV:410165-410749 5.4e-09 16_[+1]_60 chrVII:706923-707342 3.1e-08 29_[-1]_47 chrXV:353841-354328 3.5e-08 10_[-1]_66 chrXIV:104611-105126 3.5e-08 31_[+1]_45 chrVIII:115877-116400 3.5e-08 22_[-1]_54 chrIX:325512-326108 3.5e-08 32_[+1]_44 chrIX:174822-175355 3.5e-08 37_[+1]_39 chrIV:434042-434546 3.5e-08 23_[-1]_53 chrII:266178-266683 3.5e-08 42_[+1]_34 chrXVI:55842-56505 4.2e-08 49_[-1]_27 chrXIII:379048-379647 4.2e-08 9_[-1]_67 chrXI:302706-303263 4.2e-08 61_[+1]_15 chrVII:287113-287667 4.2e-08 13_[-1]_63 chrXVI:810470-811010 5.6e-08 31_[+1]_45 chrXV:487218-487752 5.6e-08 49_[+1]_27 chrXV:228107-228600 5.6e-08 73_[+1]_3 chrXIV:632405-632902 5.6e-08 41_[+1]_35 chrXII:975750-976249 5.6e-08 37_[-1]_39 chrXI:74418-74949 5.6e-08 36_[+1]_40 chrVII:730945-731455 5.6e-08 32_[+1]_44 chrXIII:258938-259443 1.5e-07 21_[-1]_55 chrXIII:168611-169072 1.5e-07 64_[+1]_12 chrX:354032-354573 1.5e-07 52_[+1]_24 chrVII:561439-561950 1.5e-07 21_[-1]_55 chrIV:1305398-1306002 1.5e-07 34_[+1]_42 chrIV:980754-981271 1.5e-07 15_[-1]_61 chrIV:946128-946624 1.5e-07 46_[+1]_30 chrII:226864-227375 1.5e-07 59_[+1]_17 chrI:182355-182776 1.5e-07 10_[-1]_66 chrIV:1175594-1176106 1.9e-07 73_[+1]_3 chrXV:710003-710497 2.2e-07 44_[+1]_32 chrXI:313172-313658 2.2e-07 39_[-1]_37 chrX:517644-518074 2.2e-07 7_[-1]_69 chrVII:319577-320128 2.2e-07 22_[+1]_54 chrVII:110384-110927 2.2e-07 23_[-1]_53 chrV:434376-434768 2.2e-07 22_[-1]_54 chrV:207122-207658 2.2e-07 60_[+1]_16 chrXVI:744074-744587 3.9e-07 47_[+1]_29 chrVII:661542-662002 3.9e-07 70_[+1]_6 chrXVI:689369-689879 4.5e-07 44_[+1]_32 chrV:288214-288715 4.5e-07 32_[-1]_44 chrXIV:725899-726407 5.1e-07 34_[-1]_42 chrII:347400-347898 5.1e-07 59_[+1]_17 chrXV:274445-275010 5.8e-07 68_[+1]_8 chrVI:191310-191812 5.8e-07 5_[-1]_71 chrXVI:559992-560480 7.5e-07 15_[-1]_61 chrXIII:352089-352585 7.5e-07 55_[+1]_21 chrVII:440313-441205 7.5e-07 10_[-1]_66 chrVI:157691-158223 7.5e-07 12_[-1]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTCVBSGGTTCGATYCCSVKHKDG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RTCVBSGGTTCGATYCCSVKHKDG width=24 seqs=134 chrIII:123364-123835 ( 32) GTCCCGGGTTCGAGTCCCGGCTCG 1 chrXVI:860162-860672 ( 55) GCCCCCGGTTCGATTCCGGGCTTG 1 chrXVI:572017-572564 ( 72) GCCCCCGGTTCGATTCCGGGCTTG 1 chrXV:281957-282470 ( 44) GCCCCCGGTTCGATTCCGGGCTTG 1 chrXV:226420-226896 ( 7) GCCCCCGGTTCGATTCCGGGCTTG 1 chrX:531608-532195 ( 20) GCCCCCGGTTCGATTCCGGGCTTG 1 chrVII:930746-931245 ( 12) GCCCCCGGTTCGATTCCGGGCTTG 1 chrVI:180641-181283 ( 66) GCCCCCGGTTCGATTCCGGGCTTG 1 chrVI:162007-162489 ( 73) GCCCCCGGTTCGATTCCGGGCTTG 1 chrIV:83326-83829 ( 64) GCCCCCGGTTCGATTCCGGGCTTG 1 chrIII:142243-143130 ( 69) GCCCCCGGTTCGATTCCGGGCTTG 1 chrXII:214701-215166 ( 4) GTCATCGGTTCGATTCCGGTTGCG 1 chrV:311734-312308 ( 56) GTCATCGGTTCGATTCCGGTTGCG 1 chrI:166042-166587 ( 48) GTCATCGGTTCGATTCCGGTTGCG 1 chrVIII:475501-475917 ( 51) GTCCCGAGTTCGATCCTCGGTTGG 1 chrVIII:134088-134633 ( 55) AACCCCGGTTCGAATCCGGGTAGG 1 chrV:250103-250515 ( 71) AACCCCGGTTCGAATCCGGGTAGG 1 chrIV:1016965-1017503 ( 27) GACCGGGGTTCGACTCCCCGCTTC 1 chrIV:644884-645407 ( 62) AACCCCGGTTCGAATCCGGGTAGG 1 chrIV:520690-521334 ( 54) AACCCCGGTTCGAATCCGGGTAGG 1 chrXIII:807998-808547 ( 28) AACCCCAGTTCGAATCCGGGTGGG 1 chrX:233703-234262 ( 52) ATTCCAGGTTCGAGTCCTGGCGGG 1 chrXIV:569670-570152 ( 10) ATCAGCGGTTCGATCCCGCTAGAG 1 chrIX:210507-210963 ( 26) ATCAGCGGTTCGATCCCGCTAGAG 1 chrII:197220-197878 ( 41) ATCAGCGGTTCGATCCCGCTAGAG 1 chrXIII:290589-291130 ( 36) GACCGGGGTTCGACTCCCCGTAGC 1 chrXVI:768998-769491 ( 17) GTCAGGGGTTCGAGCCCCCTATGA 1 chrXV:663480-664137 ( 58) GTCCCCAGTTCGATCCTGGGCGAA 1 chrXV:438456-439031 ( 18) GTCAGGGGTTCGAGCCCCCTATGA 1 chrXIII:586412-586902 ( 33) GTCCCCAGTTCGATCCTGGGCGAA 1 chrXIII:420316-420865 ( 52) GTCCCCAGTTCGATCCTGGGCGAA 1 chrXIII:372190-372720 ( 44) GTCCCCAGTTCGATCCTGGGCGAA 1 chrXII:875169-875676 ( 72) GTCAGGGGTTCGAGCCCCCTATGA 1 chrXII:687644-688171 ( 6) GTCCCCAGTTCGATCCTGGGCGAA 1 chrXI:578763-579346 ( 29) GTCAGGGGTTCGAGCCCCCTATGA 1 chrXI:379452-379966 ( 67) GTCCCCAGTTCGATCCTGGGCGAA 1 chrVIII:85081-85561 ( 31) GTCCCCAGTTCGATCCTGGGCGAA 1 chrVII:73594-74114 ( 29) GTCCCCAGTTCGATCCTGGGCGAA 1 chrV:438491-438982 ( 60) GTCCCCAGTTCGATCCTGGGCGAA 1 chrXV:980506-981024 ( 45) GCCCTGGGTTCAATTCCCAGCTCG 1 chrXV:300865-301432 ( 73) GCCCTGGGTTCAATTCCCAGCTCG 1 chrXIV:567886-568558 ( 18) GCCCTGGGTTCAATTCCCAGCTCG 1 chrXIV:546946-547416 ( 38) GCCCTGGGTTCAATTCCCAGCTCG 1 chrV:130827-131384 ( 31) AACCCCGGTTCGAATCCGGGTAAG 1 chrII:350610-351133 ( 50) AACCCCGGTTCGAATCCGGGTAAG 1 chrX:538338-538826 ( 67) ACTGCGGGTTCGAGTCCCGTACGG 1 chrIV:488432-489157 ( 57) ATCCCGAGTTCGAACCTCGGTTGG 1 chrXI:140785-141291 ( 34) GACCGGGGTTCGACTCCCCGTATC 1 chrVII:541609-542190 ( 45) GACCGGGGTTCGACTCCCCGTATC 1 chrV:487070-487616 ( 42) GACCGGGGTTCGACTCCCCGTATC 1 chrV:176879-177407 ( 50) GACCGGGGTTCGACTCCCCGTATC 1 chrII:644953-645430 ( 70) GACCGGGGTTCGACTCCCCGTATC 1 chrXVI:581823-582424 ( 34) GTTAGGGGTTCGAGCCCCCTACAG 1 chrXIII:480396-480872 ( 41) GTTAGGGGTTCGAGCCCCCTACAG 1 chrXI:202822-203310 ( 28) GTTAGGGGTTCGAGCCCCCTACAG 1 chrX:414779-415267 ( 38) GTTAGGGGTTCGAGCCCCCTACAG 1 chrVII:876178-876674 ( 63) GTTAGGGGTTCGAGCCCCCTACAG 1 chrVII:122032-122636 ( 30) GTTAGGGGTTCGAGCCCCCTACAG 1 chrVI:226448-226990 ( 23) GTTAGGGGTTCGAGCCCCCTACAG 1 chrV:135136-135687 ( 68) GTTAGGGGTTCGAGCCCCCTACAG 1 chrIX:300011-300504 ( 25) GTTAGGGGTTCGAGCCCCCTACAG 1 chrIV:1352293-1352739 ( 4) GTTAGGGGTTCGAGCCCCCTACAG 1 chrIV:1201502-1202086 ( 51) GTTAGGGGTTCGAGCCCCCTACAG 1 chrXII:374199-374638 ( 32) ATTCCAGGTTCAAGTCCTGGCGGG 1 chrXI:490758-491230 ( 69) ATTCCAGGTTCAAGTCCTGGCGGG 1 chrIV:619691-620266 ( 45) ATTCCAGGTTCAAGTCCTGGCGGG 1 chrXIII:131608-132109 ( 21) ATTATGGGTTCGACCCCCATCGTG 1 chrXI:162246-162748 ( 44) ATTATGGGTTCGACCCCCATCGTG 1 chrX:374192-374788 ( 70) ATTATGGGTTCGACCCCCATCGTG 1 chrVII:828449-828999 ( 53) ATTATGGGTTCGACCCCCATCGTG 1 chrVII:736178-736551 ( 70) ATTATGGGTTCGACCCCCATCGTG 1 chrVII:405264-405799 ( 33) ATTATGGGTTCGACCCCCATCGTG 1 chrII:405596-406211 ( 69) ATTATGGGTTCGACCCCCATCGTG 1 chrXI:46486-47014 ( 39) ATCGTGGGTTCAATTCCCACAGAG 1 chrXVI:856745-857143 ( 53) GTCTCCGGTTCGATTCCGGACTCG 1 chrXIII:768179-768641 ( 13) GTCTCCGGTTCGATTCCGGACTCG 1 chrXIII:463313-463908 ( 38) GATCGGGGTTCAATTCCCCGTCGC 1 chrXIII:320933-321333 ( 68) GTCTCCGGTTCGATTCCGGACTCG 1 chrXII:656733-657199 ( 22) GTCTCCGGTTCGATTCCGGACTCG 1 chrXII:426881-427493 ( 39) GATCGGGGTTCAATTCCCCGTCGC 1 chrX:541338-541797 ( 35) GATCGGGGTTCAATTCCCCGTCGC 1 chrX:355130-355882 ( 44) GATCGGGGTTCAATTCCCCGTCGC 1 chrX:204529-205063 ( 33) GATCGGGGTTCAATTCCCCGTCGC 1 chrVII:774089-774702 ( 49) GTCTCCGGTTCGATTCCGGACTCG 1 chrIX:336116-336636 ( 27) GATCGGGGTTCAATTCCCCGTCGC 1 chrIV:410165-410749 ( 17) GTCTCCGGTTCGATTCCGGACTCG 1 chrVII:706923-707342 ( 30) GTCCTTAGTTCGATCCTGAGTGCG 1 chrXV:353841-354328 ( 11) ATCATCGGTTCAAATCCGATTGGA 1 chrXIV:104611-105126 ( 32) ATCATCGGTTCAAATCCGATTGGA 1 chrVIII:115877-116400 ( 23) ATCATCGGTTCAAATCCGATTGGA 1 chrIX:325512-326108 ( 33) ATCATCGGTTCAAATCCGATTGGA 1 chrIX:174822-175355 ( 38) ATCATCGGTTCAAATCCGATTGGA 1 chrIV:434042-434546 ( 24) ATCATCGGTTCAAATCCGATTGGA 1 chrII:266178-266683 ( 43) ATCATCGGTTCAAATCCGATTGGA 1 chrXVI:55842-56505 ( 50) GTTGCAGGTTCAATTCCTGTCCGT 1 chrXIII:379048-379647 ( 10) GTTGCAGGTTCAATTCCTGTCCGT 1 chrXI:302706-303263 ( 62) GTTGCAGGTTCAATTCCTGTCCGT 1 chrVII:287113-287667 ( 14) GTTGCAGGTTCAATTCCTGTCCGT 1 chrXVI:810470-811010 ( 32) ATCGTGAGTTCAACCCTCACTGGG 1 chrXV:487218-487752 ( 50) ATCGTGAGTTCAACCCTCACTGGG 1 chrXV:228107-228600 ( 74) ATCGTGAGTTCAACCCTCACTGGG 1 chrXIV:632405-632902 ( 42) ATCGTGAGTTCAACCCTCACTGGG 1 chrXII:975750-976249 ( 38) ATCGTGAGTTCAACCCTCACTGGG 1 chrXI:74418-74949 ( 37) ATCGTGAGTTCAACCCTCACTGGG 1 chrVII:730945-731455 ( 33) ATCGTGAGTTCAACCCTCACTGGG 1 chrXIII:258938-259443 ( 22) CGCGCAGGTTCGAGTCCTGCAGTT 1 chrXIII:168611-169072 ( 65) ATCGGGCGTTCGACTCGCCCCCGG 1 chrX:354032-354573 ( 53) ATCGGGCGTTCGACTCGCCCCCGG 1 chrVII:561439-561950 ( 22) CGCGCAGGTTCGAGTCCTGCAGTT 1 chrIV:1305398-1306002 ( 35) CGCGCAGGTTCGAGTCCTGCAGTT 1 chrIV:980754-981271 ( 16) CGCGCAGGTTCGAGTCCTGCAGTT 1 chrIV:946128-946624 ( 47) ATCGGGCGTTCGACTCGCCCCCGG 1 chrII:226864-227375 ( 60) CGCGCAGGTTCGAGTCCTGCAGTT 1 chrI:182355-182776 ( 11) CGCGCAGGTTCGAGTCCTGCAGTT 1 chrIV:1175594-1176106 ( 74) GTCGAGAGTTCGAACCTCCCCTGG 1 chrXV:710003-710497 ( 45) GTCCTCGGATCGAAACCGAGCGGC 1 chrXI:313172-313658 ( 40) AACCCTGGTTCGATTCTAGGAGAT 1 chrX:517644-518074 ( 8) GTCCTCGGATCGAAACCGAGCGGC 1 chrVII:319577-320128 ( 23) AACCCTGGTTCGATTCTAGGAGAT 1 chrVII:110384-110927 ( 24) AACCCTGGTTCGATTCTAGGAGAT 1 chrV:434376-434768 ( 23) AACCCTGGTTCGATTCTAGGAGAT 1 chrV:207122-207658 ( 61) AACCCTGGTTCGATTCTAGGAGAT 1 chrXVI:744074-744587 ( 48) GTCGTTAGTTCAATTCTGACAGGT 1 chrVII:661542-662002 ( 71) GTCGTTAGTTCAATTCTGACAGGT 1 chrXVI:689369-689879 ( 45) CGCGCTGGTTCAAATCCTGCTGGT 1 chrV:288214-288715 ( 33) CGCGCTGGTTCAAATCCTGCTGGT 1 chrXIV:725899-726407 ( 35) CGCGCGAGTTCGAACCTCGCATCC 1 chrII:347400-347898 ( 60) CGCGCGAGTTCGAACCTCGCATCC 1 chrXV:274445-275010 ( 69) TGCGCAGGTTCGAATCCTGTCTGT 1 chrVI:191310-191812 ( 6) TGCGCAGGTTCGAATCCTGTCTGT 1 chrXVI:559992-560480 ( 16) GTCCTGTGTTCGATCCACAGAATT 1 chrXIII:352089-352585 ( 56) GTCCTGTGTTCGATCCACAGAATT 1 chrVII:440313-441205 ( 11) GTCCTGTGTTCGATCCACAGAATT 1 chrVI:157691-158223 ( 13) GTCCTGTGTTCGATCCACAGAATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTCVBSGGTTCGATYCCSVKHKDG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 24 n= 42427 bayes= 10.3185 E= 8.7e-469 15 -135 158 -437 -73 -76 -109 98 -1371 199 -1371 -33 -25 128 28 -279 -537 126 42 -13 -138 88 126 -205 -73 -309 200 -337 -1371 -1371 240 -1371 -437 -1371 -1371 167 -1371 -1371 -1371 169 -1371 240 -1371 -1371 -21 -1371 194 -1371 169 -1371 -1371 -1371 -79 -9 8 51 -437 100 -1371 96 -1371 240 -1371 -1371 -337 194 -309 -52 -305 126 97 -121 -25 46 133 -1371 -279 -9 128 2 -9 108 -1371 -2 -138 -3 124 -33 -42 -58 106 -33 -105 -58 150 -73 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTCVBSGGTTCGATYCCSVKHKDG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 24 nsites= 134 E= 8.7e-469 0.343284 0.074627 0.567164 0.014925 0.186567 0.111940 0.089552 0.611940 0.000000 0.753731 0.000000 0.246269 0.261194 0.462687 0.231343 0.044776 0.007463 0.455224 0.253731 0.283582 0.119403 0.350746 0.455224 0.074627 0.186567 0.022388 0.761194 0.029851 0.000000 0.000000 1.000000 0.000000 0.014925 0.000000 0.000000 0.985075 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.268657 0.000000 0.731343 0.000000 1.000000 0.000000 0.000000 0.000000 0.179104 0.179104 0.201493 0.440299 0.014925 0.380597 0.000000 0.604478 0.000000 1.000000 0.000000 0.000000 0.029851 0.731343 0.022388 0.216418 0.037313 0.455224 0.373134 0.134328 0.261194 0.261194 0.477612 0.000000 0.044776 0.179104 0.462687 0.313433 0.291045 0.402985 0.000000 0.305970 0.119403 0.186567 0.447761 0.246269 0.231343 0.126866 0.395522 0.246269 0.149254 0.126866 0.537313 0.186567 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTCVBSGGTTCGATYCCSVKHKDG MEME-1 regular expression -------------------------------------------------------------------------------- [GA]T[CT][CAG][CTG][GC]GGTTC[GA]A[TG][TC]C[CT][CG][GAC][GT][CTA][GT][GTA]G -------------------------------------------------------------------------------- Time 295.33 secs. ******************************************************************************** ******************************************************************************** MOTIF NSSCTYWAMCCACTRVRCYAHVNRVSC MEME-2 width = 27 sites = 156 llr = 2374 E-value = 4.7e-462 ******************************************************************************** -------------------------------------------------------------------------------- Motif NSSCTYWAMCCACTRVRCYAHVNRVSC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 321111366:29::434::a4333311 pos.-specific C 243524114a6:9:12:a7:4222358 probability G 346121:2::11::346::::434441 matrix T 3::25462::::1a1:::3:2131:1: bits 2.4 * 2.2 * * 1.9 * * 1.7 * ** * * Relative 1.4 * ** * * * Entropy 1.2 * *** **** * (22.0 bits) 1.0 * *** **** * 0.7 ** ****** **** ** 0.5 *** * ****** ****** *** 0.2 ********************* **** 0.0 --------------------------- Multilevel GCGCTTTAACCACTAGGCCACGAGGCC consensus AGCTCCATC A GAA T AAGACG sequence T C T T A C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NSSCTYWAMCCACTRVRCYAHVNRVSC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------- chrXVI:856745-857143 - 8 2.55e-12 TGCTAAGGGA GCGCGCTACCGACTACGCCACACGCCC GAATCTT chrXIII:768179-768641 + 55 2.55e-12 TGCTAAGGGA GCGCGCTACCGACTACGCCACACGCCC ATTTCTTATT chrXII:656733-657199 + 64 2.55e-12 TGCTAAGGGA GCGCGCTACCGACTACGCCACACGCCC AATTTTCTTG chrXI:219640-220117 - 67 2.55e-12 TAAGGGA GCGCGCTACCGACTACGCCACACGCCC TATTTACTGT chrX:197130-197610 + 39 2.55e-12 TGCTAAGGGA GCGCGCTACCGACTACGCCACACGCCC TAATATTATT chrVII:774089-774702 - 4 2.55e-12 TGCTAAGGGA GCGCGCTACCGACTACGCCACACGCCC AAT chrVI:204787-205226 + 14 2.55e-12 TGCTAAGGGA GCGCGCTACCGACTACGCCACACGCCC GAACGTTTGT chrXII:214701-215166 + 46 1.39e-11 TGCAAGGGAA GCGCGCTACCAACTGCGCCATGTGCCC TAAAACGCGT chrVII:794220-794602 - 56 1.39e-11 TGCAAGGGAA GCGCGCTACCAACTGCGCCATGTGCCC GCAATCTATG chrI:166042-166587 - 3 1.39e-11 TGCAAGGGAA GCGCGCTACCAACTGCGCCATGTGCCC AA chrXIII:258938-259443 + 73 4.07e-11 TTCTAATCTT TCGCCTTAACCACTCGGCCAAGTTGCC A chrXII:167750-168241 + 54 4.07e-11 TTCTAATCTT TCGCCTTAACCACTCGGCCAAGTTGCC ATATGACTAT chrX:523874-524351 + 5 4.07e-11 TCTT TCGCCTTAACCACTCGGCCAAGTTGCC TTTAATCTCT chrVIII:132832-133352 + 39 4.07e-11 TTCTAATCTT TCGCCTTAACCACTCGGCCAAGTTGCC ACTTATTATA chrVII:561439-561950 + 73 4.07e-11 TTCTAATCTT TCGCCTTAACCACTCGGCCAAGTTGCC A chrIV:980754-981271 + 67 4.07e-11 TTCTAATCTT TCGCCTTAACCACTCGGCCAAGTTGCC TCAATTT chrIV:437547-438021 - 38 4.07e-11 TTCTAATCTT TCGCCTTAACCACTCGGCCAAGTTGCC TTACTAATGA chrII:226864-227375 - 6 4.07e-11 TTCTAATCTT TCGCCTTAACCACTCGGCCAAGTTGCC TCGTT chrI:182355-182776 + 62 4.07e-11 TTCTAATCTT TCGCCTTAACCACTCGGCCAAGTTGCC AAAATTGTAT chrIII:227745-228222 - 9 1.10e-10 TTCGAGTCTC TCGCCTTAACCACTCGGCCATAGTGCC ATTTCGAT chrIV:1150684-1151187 + 30 1.59e-10 ATAGCAGGCA TCGCCTTAACCACTCGGCCACTGGGAC TGAAACACTT chrXIV:602091-602576 - 29 1.91e-10 ATTAGCACGG TGCCTTAACCAACTGGGCCAAGAGACC ATTGTTATCT chrXIV:569670-570152 + 53 1.91e-10 ATTAGCACGG TGCCTTAACCAACTGGGCCAAGAGACC ACTGTTATCT chrV:443028-443494 + 38 1.91e-10 ATTAGCACGG TGCCTTAACCAACTGGGCCAAGAGACC AAATTTTAAT chrXII:605150-605641 + 61 3.26e-10 TATAAGCACG AAGCTCTAACCACTGAGCTACACGAGC ATTTTCGAAA chrIV:884173-884636 - 7 3.26e-10 TATAAGCACG AAGCTCTAACCACTGAGCTACACGAGC ATTTTC chrXII:731909-732332 - 20 5.42e-10 CTAAATCTGA CGCCTTAAACCACTCGGCCAAACTCCC ATTGTATGTT chrXII:592310-592949 + 14 5.42e-10 CTAAATCTGA CGCCTTAAACCACTCGGCCAAACTCCC ATTGTATGTT chrX:617713-618169 - 28 5.42e-10 CTAAATCTGA CGCCTTAAACCACTCGGCCAAACTCCC ATTGTTTGTT chrXV:353841-354328 + 53 1.03e-09 TACTAGTGTG GCGCCTTACCAACTTGGCCATAGAAGC AGTAAACCGT chrXV:113596-113990 - 59 1.03e-09 TACTAGTGTG GCGCCTTACCAACTTGGCCATAGAAGC TAAATCTCTG chrXIV:560545-560993 + 20 1.03e-09 TACTAGTGTG GCGCCTTACCAACTTGGCCATAGAAGC CCGTTATTAC chrX:58946-59399 + 24 1.03e-09 TACTAGTGTG GCGCCTTACCAACTTGGCCATAGAAGC TTCTATTTTA chrVIII:115877-116400 + 65 1.03e-09 TACTAGTGTG GCGCCTTACCAACTTGGCCATAGAAGC TCTAATAGT chrIV:434042-434546 + 66 1.03e-09 TACTAGTGTG GCGCCTTACCAACTTGGCCATAGAAGC TTCTGATT chrXIV:374652-375098 - 44 2.95e-09 CTTCAGTCTG GCGCTCTCCCAACTGAGCTAAGTCCGC TTATTTTTCT chrIV:1095173-1095679 + 59 2.95e-09 CTTCAGTCTG GCGCTCTCCCAACTGAGCTAAGTCCGC TAACATAAGA chrXVI:860162-860672 - 12 5.16e-09 ATGGCAACGT TGGATTTTACCACTAAACCACTTGCGC TTGTTATTTA chrXVI:572017-572564 - 29 5.16e-09 ATGGCAACGT TGGATTTTACCACTAAACCACTTGCGC GAAGTATTGT chrXV:281957-282470 - 1 5.16e-09 ATGGCAACGT TGGATTTTACCACTAAACCACTTGCGC chrXV:226420-226896 + 47 5.16e-09 ATGGCAACGT TGGATTTTACCACTAAACCACTTGCGC TGAATTTCTT chrXIII:183757-184195 + 16 5.16e-09 ATGGCAACGT TGGATTTTACCACTAAACCACTTGCGC GATCTTTATT chrXII:687644-688171 + 49 5.16e-09 GTTAAGCAGA TGCCATAACCGACTAGACCACGAAACC TATTATTTAT chrXI:379452-379966 - 21 5.16e-09 GTTAAGCAGA TGCCATAACCGACTAGACCACGAAACC TATTAATCTG chrXI:307944-308453 + 43 5.16e-09 GTTAAGCAGA TGCCATAACCGACTAGACCACGAAACC ACTTAATTGT chrX:396556-397007 + 39 5.16e-09 ATGGCAACGT TGGATTTTACCACTAAACCACTTGCGC TTACTTTTGA chrX:378164-378569 - 44 5.16e-09 GTTAAGCAGA TGCCATAACCGACTAGACCACGAAACC TATTAATTTA chrVIII:85081-85561 + 74 5.16e-09 GTTAAGCAGA TGCCATAACCGACTAGACCACGAAACC chrVII:930746-931245 + 52 5.16e-09 ATGGCAACGT TGGATTTTACCACTAAACCACTTGCGC TTACTGATTA chrVII:876178-876674 - 18 5.16e-09 TAAGAGTCAT ACGCGCTACCGATTGCGCCAACAAGGC TATTCTATTA chrVII:845329-845989 - 40 5.16e-09 ATGGCAACGT TGGATTTTACCACTAAACCACTTGCGC TTGTTATTTA chrVII:823274-823719 - 36 5.16e-09 GTTAAGCAGA TGCCATAACCGACTAGACCACGAAACC ACTCTTATTG chrVII:412134-412594 + 27 5.16e-09 GTTAAGCAGA TGCCATAACCGACTAGACCACGAAACC AGTTTTTTGA chrVII:73594-74114 + 72 5.16e-09 GTTAAGCAGA TGCCATAACCGACTAGACCACGAAACC AC chrVI:226448-226990 + 65 5.16e-09 TAAGAGTCAT ACGCGCTACCGATTGCGCCAACAAGGC ATTTTAATC chrVI:162007-162489 - 30 5.16e-09 ATGGCAACGT TGGATTTTACCACTAAACCACTTGCGC TTGTTTTCTT chrV:469254-469659 - 51 5.16e-09 GTTAAGCAGA TGCCATAACCGACTAGACCACGAAACC AATTATTTCT chrV:438491-438982 - 14 5.16e-09 GTTAAGCAGA TGCCATAACCGACTAGACCACGAAACC TAATTTGTTG chrV:435609-436022 + 33 5.16e-09 TAAGAGTCAT ACGCGCTACCGATTGCGCCAACAAGGC TCTTATTGTT chrIX:300011-300504 + 67 5.16e-09 TAAGAGTCAT ACGCGCTACCGATTGCGCCAACAAGGC TATTTCG chrIV:1352293-1352739 + 46 5.16e-09 TAAGAGTCAT ACGCGCTACCGATTGCGCCAACAAGGC TATTTCGTTG chrIV:1201502-1202086 - 6 5.16e-09 TAAGAGTCAT ACGCGCTACCGATTGCGCCAACAAGGC TATTT chrIV:992615-993061 - 44 5.16e-09 ATGGCAACGT TGGATTTTACCACTAAACCACTTGCGC TCACAATTGT chrIV:83326-83829 - 21 5.16e-09 ATGGCAACGT TGGATTTTACCACTAAACCACTTGCGC TAAGTGAACT chrXVI:622359-622829 + 61 6.76e-09 CTTCAGTCTG GCGCTCTCCCAACTGAGCTAAATCCGC ATATCAGAAT chrXV:464239-464714 - 24 6.76e-09 GCCCAAAGCG AGAATCATACCACTAGACCACACGCCC TTGTTAACTT chrXIII:195921-196412 + 28 6.76e-09 GCCCAAAGCG AGAATCATACCACTAGACCACACGCCC TTGTGAACTT chrXII:92353-92842 - 1 6.76e-09 GCCCAAAGCG AGAATCATACCACTAGACCACACGCCC chrVIII:388704-389210 + 62 6.76e-09 GCCCAAAGCG AGAATCATACCACTAGACCACACGCCC ATGTATCTGT chrVIII:358278-358783 + 63 6.76e-09 CTTCAGTCTG GCGCTCTCCCAACTGAGCTAAATCCGC TTACTATTTG chrVIII:237694-238132 + 50 6.76e-09 CTTCAGTCTG GCGCTCTCCCAACTGAGCTAAATCCGC TTACTATTTG chrVII:440313-441205 + 72 6.76e-09 CTTCAGTCTG GCGCTCTCCCAACTGAGCTAAATCCGC AT chrVI:157691-158223 + 74 6.76e-09 CTTCAGTCTG GCGCTCTCCCAACTGAGCTAAATCCGC chrVI:101144-101630 - 39 6.76e-09 GCCCAAAGCG AGAATCATACCACTAGACCACACGCCC GAATTATTGT chrII:36186-36639 - 36 6.76e-09 CTTCAGTCTG GCGCTCTCCCAACTGAGCTAAATCCGC TTACAACTAA chrI:138917-139361 - 63 6.76e-09 GCCCAAAGCG AGAATCATACCACTAGACCACACGCCC GTACTAATTG chrXIII:504674-505205 - 6 1.29e-08 TTGAATCAGG CGCCTTAGACCGCTCGGCCAAACAACC ACTTA chrVII:857236-857717 + 39 1.29e-08 TTGAATCAGG CGCCTTAGACCGCTCGGCCAAACAACC ACTTATTTGT chrVII:205315-205787 - 20 1.29e-08 TTGAATCAGG CGCCTTAGACCGCTCGGCCAAACAACC ACTTATTTGT chrXII:962837-963285 + 18 1.87e-08 TTAAGTCTGC CGCCTTAGACCACTCGGCCAACCCTCC GTCGATAATA chrXI:83981-84420 - 58 1.87e-08 TTAAGTCTGC CGCCTTAGACCACTCGGCCAACCCTCC ATACAAATTT chrX:424279-424786 + 7 1.87e-08 GTCTGC CGCCTTAGACCACTCGGCCAACCCTCC ATCTTATTTA chrIV:519543-519961 - 41 1.87e-08 TTAAGTCTGC CGCCTTAGACCACTCGGCCAACCCTCC GTAAAATCAC chrII:347400-347898 - 4 1.87e-08 TTAAGTCTGC CGCCTTAGACCACTCGGCCAACCCTCC GTA chrXII:875169-875676 - 4 2.11e-08 TAAAAGCCGA ACGCTCTACCAACTGAGCTAACAAGGA TGA chrVII:115204-115761 - 56 2.11e-08 TAAAAGCCGA ACGCTCTACCAACTGAGCTAACAAGGA TGAGTTCTTC chrIV:359370-359840 - 22 2.11e-08 TAAAAGCCGA ACGCTCTACCAACTGAGCTAACAAGGA TGAGTTCTTC chrXV:594224-594661 + 7 3.37e-08 AAGCAT AAATTCTAACCACTGAACCACTTGCGC GTTTCAATCA chrXV:487218-487752 - 4 3.77e-08 AACAGTCGCA CGCCTTAACCAACTTGGCCATGGAGTC TAA chrXV:228107-228600 - 28 3.77e-08 AACAGTCGCA CGCCTTAACCAACTTGGCCATGGAGTC TAATATTTTA chrXIV:102489-102949 - 47 3.77e-08 AACAGTCGCA CGCCTTAACCAACTTGGCCATGGAGTC TTATAATATA chrVI:137268-137824 + 37 3.77e-08 AACAGTCGCA CGCCTTAACCAACTTGGCCATGGAGTC AGTCACTTTT chrIII:127503-127916 - 57 3.77e-08 AACAGTCGCA CGCCTTAACCAACTTGGCCATGGAGTC ATTTTATCTT chrXV:976202-976668 - 36 6.55e-08 TATGAGACTG ACGCTCTTCCTACTGAGCTACTGAAGC GCACAAAATA chrX:422668-423247 - 30 6.55e-08 TATGAGACTG ACGCTCTTCCTACTGAGCTACTGAAGC ATACAAAGGA chrIV:1175594-1176106 - 29 6.55e-08 TATGAGACTG ACGCTCTTCCTACTGAGCTACTGAAGC TTTGTTTTGT chrXV:340146-340622 + 11 9.00e-08 TCGTAGCCAG ACGCCGTGACCATTGGGCCACGAGGAA CAGATCTTGA chrXI:490758-491230 - 24 9.00e-08 TCGTAGCCAG ACGCCGTGACCATTGGGCCACGAGGAA CAAGAATTAT chrX:233703-234262 - 7 9.00e-08 TCGTAGCCAG ACGCCGTGACCATTGGGCCACGAGGAA CAAGAA chrV:492199-492608 + 45 9.00e-08 TCGTAGCCAG ACGCCGTGACCATTGGGCCACGAGGAA TAGGATGTTC chrIV:1256866-1257272 + 34 9.00e-08 TGGGAAGCAT GAATTCTAACCACTGAACCACTTTCGC TAAGAAGATC chrXVI:744074-744587 - 4 1.23e-07 TTACAAGTGC AACGCTCTACCACTAAGCTAAGGAGGC TTT chrXIII:807998-808547 + 69 1.23e-07 TCAGAACCGA AAGTGATAACCACTACACTATAGGACC TTTTT chrXII:448490-448952 + 24 1.23e-07 TCAAAACCGA AAGTGATAACCACTACACTATAGGACC GGAACTTCTT chrVIII:466770-467215 - 48 1.23e-07 TTACAAGTGC AACGCTCTACCACTAAGCTAAGGAGGC TAAAAATACA chrVIII:134088-134633 - 11 1.23e-07 TCAAAACCGA AAGTGATAACCACTACACTATAGGACC GGAACTTACT chrVII:1004031-1004435 - 33 1.23e-07 TTACAAGTGC AACGCTCTACCACTAAGCTAAGGAGGC AAACCCTTGA chrVII:661542-662002 - 27 1.23e-07 TTACAAGTGC AACGCTCTACCACTAAGCTAAGGAGGC AAATTTTTAC chrV:250103-250515 - 27 1.23e-07 TCAAAACCGA AAGTGATAACCACTACACTATAGGACC AGTACAACTG chrIV:802572-802998 + 41 1.23e-07 TCAAAACCGA AAGTGATAACCACTACACTATAGGACC GACAATTCAT chrIV:520690-521334 - 10 1.23e-07 TCAAAACCGA AAGTGATAACCACTACACTATAGGACC CTAAAATGG chrIII:168120-168592 + 40 1.23e-07 TCAAAACCGA AAGTGATAACCACTACACTATAGGACC AGGACTTCTT chrXIII:923154-924383 + 53 2.43e-07 AAATGGAACA GGGTATAGACCACTGAGGCAAGTGCCG TGCATAATGA chrV:130827-131384 + 72 3.51e-07 TCAAAACCGA AAGTGATAACCACTACACTATAAAACC TC chrII:350610-351133 - 6 3.51e-07 TCAAAACCGA AAGTGATAACCACTACACTATAAAACC CTTTT chrXIV:631702-632137 + 22 4.20e-07 ACCCTAAGCG AGAATCATACCTCTAGACCACACGCCC GGTAGAAGTT chrVII:706923-707342 + 71 4.20e-07 TTTGCAATCT GCTGCGCTACCACTGCGCCATACGAGC TTG chrIII:123364-123835 + 73 4.20e-07 ACCCTAAGCG AGAATCATACCTCTAGACCACACGCCC T chrII:642849-643301 + 27 4.20e-07 TTTGCAATCT GCTGCGCTACCACTGCGCCATACGAGC TTTCTATTAC chrII:326578-327140 + 30 5.94e-07 GTAAAGGCGA CGTCTTGAACCACTGGACCATTGGACC CGGAACTCGA chrXIII:131608-132109 + 62 6.47e-07 TTAGAAGTCA GACGCGTTGCCATTACGCCACGCGAGC TAAATTTCTT chrVII:736178-736551 - 26 6.47e-07 TTAGAAGTCA GACGCGTTGCCATTACGCCACGCGAGC TATTGAAATT chrII:405596-406211 - 25 6.47e-07 TTAGAAGTCA GACGCGTTGCCATTACGCCACGCGAGC TACTATTTGT chrXI:0-1061 - 69 7.03e-07 GCACA GGGTATAAACCGCTGAGGCAAGTGCCG TGAATAATGA chrXIII:362826-363283 - 60 8.30e-07 CCACAACGAT GTGTACTAACCACTATACTAAGATGGC AAACTTGGAT chrVIII:62562-62930 - 59 8.30e-07 CCACAACGAT GTGTACTAACCACTATACTAAGATGGC ATATGATTTT chrVII:110384-110927 + 65 8.30e-07 CCACAACGAT GTGTACTAACCACTATACTAAGATGGC AGGTAATTA chrV:434376-434768 + 64 8.30e-07 CCACAACGAT GTGTACTAACCACTATACTAAGATGGC GACTTTTCAA chrV:207122-207658 - 17 8.30e-07 CCACAACGAT GTGTACTAACCACTATACTAAGATGGC GAACTTATAT chrX:538338-538826 - 23 1.06e-06 TTAGGAGGGA GACGCGTTACCATTACGCCAACGGAAC CAACTTGGTT chrIV:1524094-1525690 + 15 1.14e-06 AAATGGCACA GGGTATAGACCGCTGAGGCAAGTGCCG TGTATAATGA chrIII:1-1736 - 22 1.14e-06 AAATGGCACA GGGTATAGACCGCTGAGGCAAGTGCCG TGCATAATGA chrI:229100-230196 + 47 1.14e-06 AAATGGGACA GGGTATAGACCGCTGAGGCAAGTGCCG TGTATGGTGA chrI:1-1134 - 26 1.14e-06 AAATGGCACA GGGTATAGACCGCTGAGGCAAGTGCCG TGCATAATGA chrXV:287994-288427 - 32 1.45e-06 ACAGTCTTGC GCCTTAAACCAACTTGGCTACCGAGAG AAGCTATTTT chrXIII:837698-838214 - 22 1.45e-06 ACAGTCTTGC GCCTTAAACCAACTTGGCTACCGAGAG TCAATTAACT chrXIII:168611-169072 - 4 1.45e-06 ACAGTCTTGC GCCTTAAACCAACTTGGCTACCGAGAG TGA chrX:542753-543282 + 51 1.45e-06 ACAGTCTTGC GCCTTAAACCAACTTGGCTACCGAGAG TATTTAATTG chrVI:210454-210899 + 55 1.45e-06 ACAGTCTTGC GCCTTAAACCAACTTGGCTACCGAGAG TCGTTTTTGT chrVI:167214-167698 - 31 1.45e-06 ACAGTCTTGC GCCTTAAACCAACTTGGCTACCGAGAG TCGTTTTTGT chrXI:99351-100017 + 22 2.61e-06 CATCTATTAT GGGAACATCCCGCTGTACTATGCGGTC TCGTCCTCTA chrXV:571745-572187 - 42 4.49e-06 CGACAAGCGC CCATTCTGACCATTAAACTATCACGGA TTTTAATTGT chrXI:513188-513630 + 18 4.49e-06 CGACAAGCGC CCATTCTGACCATTAAACTATCACGGA ACGTTATTTG chrX:374192-374788 + 29 4.49e-06 CGACAAGCGC CCATTCTGACCATTAAACTATCACGGA AGAAACAAAG chrVII:544357-544906 + 41 4.49e-06 CGACAAGCGC CCATTCTGACCATTAAACTATCACGGA AGAAATATCT chrVII:531405-531808 - 54 4.49e-06 CGACAAGCGC CCATTCTGACCATTAAACTATCACGGA AGTAACTCGA chrIX:336116-336636 + 68 4.49e-06 CGACAAGCGC CCATTCTGACCATTAAACTATCACGGA TTTGTT chrIX:324145-324623 + 14 4.49e-06 CGACAAGCGC CCATTCTGACCATTAAACTATCACGGA ATATTAGATG chrIV:568693-569266 - 35 4.49e-06 CGACAAGCGC CCATTCTGACCATTAAACTATCACGGA AGAAACAAAG chrXVI:338677-339132 + 39 5.81e-06 TTATGAGCCC TGCGCGCTTCCACTGCGCCACGGCGCT GCTAAATCAT chrXV:710003-710497 - 1 5.81e-06 TTATGAGCCC TGCGCGCTTCCACTGCGCCACGGCGCT chrX:517644-518074 + 49 5.81e-06 TTATGAGCCC TGCGCGCTTCCACTGCGCCACGGCGCT TAACTTTTAT chrXII:489274-489589 - 38 6.19e-06 GAGTTTCGCG TATGGTCACCCACTACACTACTCGGTC AGGCTCTTAC chrXII:468759-468993 - 57 6.19e-06 GAGTTTCGCG TATGGTCACCCACTACACTACTCGGTC AGGCTCTTAC chrIV:1075308-1075750 + 39 7.44e-06 TGTGAAGGCA ACGTGATAGCCGCTACACTATTGGAAC AATATTACGG chrV:135136-135687 - 3 1.25e-05 AAAGCATCAG CAGTAATGACAGCTCTGCTATTCGCCC AA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NSSCTYWAMCCACTRVRCYAHVNRVSC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXVI:856745-857143 2.6e-12 7_[-2]_66 chrXIII:768179-768641 2.6e-12 54_[+2]_19 chrXII:656733-657199 2.6e-12 63_[+2]_10 chrXI:219640-220117 2.6e-12 66_[-2]_7 chrX:197130-197610 2.6e-12 38_[+2]_35 chrVII:774089-774702 2.6e-12 3_[-2]_70 chrVI:204787-205226 2.6e-12 13_[+2]_60 chrXII:214701-215166 1.4e-11 45_[+2]_28 chrVII:794220-794602 1.4e-11 55_[-2]_18 chrI:166042-166587 1.4e-11 2_[-2]_71 chrXIII:258938-259443 4.1e-11 72_[+2]_1 chrXII:167750-168241 4.1e-11 53_[+2]_20 chrX:523874-524351 4.1e-11 4_[+2]_69 chrVIII:132832-133352 4.1e-11 38_[+2]_35 chrVII:561439-561950 4.1e-11 72_[+2]_1 chrIV:980754-981271 4.1e-11 66_[+2]_7 chrIV:437547-438021 4.1e-11 37_[-2]_36 chrII:226864-227375 4.1e-11 5_[-2]_68 chrI:182355-182776 4.1e-11 61_[+2]_12 chrIII:227745-228222 1.1e-10 8_[-2]_65 chrIV:1150684-1151187 1.6e-10 29_[+2]_44 chrXIV:602091-602576 1.9e-10 28_[-2]_45 chrXIV:569670-570152 1.9e-10 52_[+2]_21 chrV:443028-443494 1.9e-10 37_[+2]_36 chrXII:605150-605641 3.3e-10 60_[+2]_13 chrIV:884173-884636 3.3e-10 6_[-2]_67 chrXII:731909-732332 5.4e-10 19_[-2]_54 chrXII:592310-592949 5.4e-10 13_[+2]_60 chrX:617713-618169 5.4e-10 27_[-2]_46 chrXV:353841-354328 1e-09 52_[+2]_21 chrXV:113596-113990 1e-09 58_[-2]_15 chrXIV:560545-560993 1e-09 19_[+2]_54 chrX:58946-59399 1e-09 23_[+2]_50 chrVIII:115877-116400 1e-09 64_[+2]_9 chrIV:434042-434546 1e-09 65_[+2]_8 chrXIV:374652-375098 3e-09 43_[-2]_30 chrIV:1095173-1095679 3e-09 58_[+2]_15 chrXVI:860162-860672 5.2e-09 11_[-2]_62 chrXVI:572017-572564 5.2e-09 28_[-2]_45 chrXV:281957-282470 5.2e-09 [-2]_73 chrXV:226420-226896 5.2e-09 46_[+2]_27 chrXIII:183757-184195 5.2e-09 15_[+2]_58 chrXII:687644-688171 5.2e-09 48_[+2]_25 chrXI:379452-379966 5.2e-09 20_[-2]_53 chrXI:307944-308453 5.2e-09 42_[+2]_31 chrX:396556-397007 5.2e-09 38_[+2]_35 chrX:378164-378569 5.2e-09 43_[-2]_30 chrVIII:85081-85561 5.2e-09 73_[+2] chrVII:930746-931245 5.2e-09 51_[+2]_22 chrVII:876178-876674 5.2e-09 17_[-2]_56 chrVII:845329-845989 5.2e-09 39_[-2]_34 chrVII:823274-823719 5.2e-09 35_[-2]_38 chrVII:412134-412594 5.2e-09 26_[+2]_47 chrVII:73594-74114 5.2e-09 71_[+2]_2 chrVI:226448-226990 5.2e-09 64_[+2]_9 chrVI:162007-162489 5.2e-09 29_[-2]_44 chrV:469254-469659 5.2e-09 50_[-2]_23 chrV:438491-438982 5.2e-09 13_[-2]_60 chrV:435609-436022 5.2e-09 32_[+2]_41 chrIX:300011-300504 5.2e-09 66_[+2]_7 chrIV:1352293-1352739 5.2e-09 45_[+2]_28 chrIV:1201502-1202086 5.2e-09 5_[-2]_68 chrIV:992615-993061 5.2e-09 43_[-2]_30 chrIV:83326-83829 5.2e-09 20_[-2]_53 chrXVI:622359-622829 6.8e-09 60_[+2]_13 chrXV:464239-464714 6.8e-09 23_[-2]_50 chrXIII:195921-196412 6.8e-09 27_[+2]_46 chrXII:92353-92842 6.8e-09 [-2]_73 chrVIII:388704-389210 6.8e-09 61_[+2]_12 chrVIII:358278-358783 6.8e-09 62_[+2]_11 chrVIII:237694-238132 6.8e-09 49_[+2]_24 chrVII:440313-441205 6.8e-09 71_[+2]_2 chrVI:157691-158223 6.8e-09 73_[+2] chrVI:101144-101630 6.8e-09 38_[-2]_35 chrII:36186-36639 6.8e-09 35_[-2]_38 chrI:138917-139361 6.8e-09 62_[-2]_11 chrXIII:504674-505205 1.3e-08 5_[-2]_68 chrVII:857236-857717 1.3e-08 38_[+2]_35 chrVII:205315-205787 1.3e-08 19_[-2]_54 chrXII:962837-963285 1.9e-08 17_[+2]_56 chrXI:83981-84420 1.9e-08 57_[-2]_16 chrX:424279-424786 1.9e-08 6_[+2]_67 chrIV:519543-519961 1.9e-08 40_[-2]_33 chrII:347400-347898 1.9e-08 3_[-2]_70 chrXII:875169-875676 2.1e-08 3_[-2]_70 chrVII:115204-115761 2.1e-08 55_[-2]_18 chrIV:359370-359840 2.1e-08 21_[-2]_52 chrXV:594224-594661 3.4e-08 6_[+2]_67 chrXV:487218-487752 3.8e-08 3_[-2]_70 chrXV:228107-228600 3.8e-08 27_[-2]_46 chrXIV:102489-102949 3.8e-08 46_[-2]_27 chrVI:137268-137824 3.8e-08 36_[+2]_37 chrIII:127503-127916 3.8e-08 56_[-2]_17 chrXV:976202-976668 6.6e-08 35_[-2]_38 chrX:422668-423247 6.6e-08 29_[-2]_44 chrIV:1175594-1176106 6.6e-08 28_[-2]_45 chrXV:340146-340622 9e-08 10_[+2]_63 chrXI:490758-491230 9e-08 23_[-2]_50 chrX:233703-234262 9e-08 6_[-2]_67 chrV:492199-492608 9e-08 44_[+2]_29 chrIV:1256866-1257272 9e-08 33_[+2]_40 chrXVI:744074-744587 1.2e-07 3_[-2]_70 chrXIII:807998-808547 1.2e-07 68_[+2]_5 chrXII:448490-448952 1.2e-07 23_[+2]_50 chrVIII:466770-467215 1.2e-07 47_[-2]_26 chrVIII:134088-134633 1.2e-07 10_[-2]_63 chrVII:1004031-1004435 1.2e-07 32_[-2]_41 chrVII:661542-662002 1.2e-07 26_[-2]_47 chrV:250103-250515 1.2e-07 26_[-2]_47 chrIV:802572-802998 1.2e-07 40_[+2]_33 chrIV:520690-521334 1.2e-07 9_[-2]_64 chrIII:168120-168592 1.2e-07 39_[+2]_34 chrXIII:923154-924383 2.4e-07 52_[+2]_21 chrV:130827-131384 3.5e-07 71_[+2]_2 chrII:350610-351133 3.5e-07 5_[-2]_68 chrXIV:631702-632137 4.2e-07 21_[+2]_52 chrVII:706923-707342 4.2e-07 70_[+2]_3 chrIII:123364-123835 4.2e-07 72_[+2]_1 chrII:642849-643301 4.2e-07 26_[+2]_47 chrII:326578-327140 5.9e-07 29_[+2]_44 chrXIII:131608-132109 6.5e-07 61_[+2]_12 chrVII:736178-736551 6.5e-07 25_[-2]_48 chrII:405596-406211 6.5e-07 24_[-2]_49 chrXI:0-1061 7e-07 68_[-2]_5 chrXIII:362826-363283 8.3e-07 59_[-2]_14 chrVIII:62562-62930 8.3e-07 58_[-2]_15 chrVII:110384-110927 8.3e-07 64_[+2]_9 chrV:434376-434768 8.3e-07 63_[+2]_10 chrV:207122-207658 8.3e-07 16_[-2]_57 chrX:538338-538826 1.1e-06 22_[-2]_51 chrIV:1524094-1525690 1.1e-06 14_[+2]_59 chrIII:1-1736 1.1e-06 21_[-2]_52 chrI:229100-230196 1.1e-06 46_[+2]_27 chrI:1-1134 1.1e-06 25_[-2]_48 chrXV:287994-288427 1.4e-06 31_[-2]_42 chrXIII:837698-838214 1.4e-06 21_[-2]_52 chrXIII:168611-169072 1.4e-06 3_[-2]_70 chrX:542753-543282 1.4e-06 50_[+2]_23 chrVI:210454-210899 1.4e-06 54_[+2]_19 chrVI:167214-167698 1.4e-06 30_[-2]_43 chrXI:99351-100017 2.6e-06 21_[+2]_52 chrXV:571745-572187 4.5e-06 41_[-2]_32 chrXI:513188-513630 4.5e-06 17_[+2]_56 chrX:374192-374788 4.5e-06 28_[+2]_45 chrVII:544357-544906 4.5e-06 40_[+2]_33 chrVII:531405-531808 4.5e-06 53_[-2]_20 chrIX:336116-336636 4.5e-06 67_[+2]_6 chrIX:324145-324623 4.5e-06 13_[+2]_60 chrIV:568693-569266 4.5e-06 34_[-2]_39 chrXVI:338677-339132 5.8e-06 38_[+2]_35 chrXV:710003-710497 5.8e-06 [-2]_73 chrX:517644-518074 5.8e-06 48_[+2]_25 chrXII:489274-489589 6.2e-06 37_[-2]_36 chrXII:468759-468993 6.2e-06 56_[-2]_17 chrIV:1075308-1075750 7.4e-06 38_[+2]_35 chrV:135136-135687 1.3e-05 2_[-2]_71 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NSSCTYWAMCCACTRVRCYAHVNRVSC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF NSSCTYWAMCCACTRVRCYAHVNRVSC width=27 seqs=156 chrXVI:856745-857143 ( 8) GCGCGCTACCGACTACGCCACACGCCC 1 chrXIII:768179-768641 ( 55) GCGCGCTACCGACTACGCCACACGCCC 1 chrXII:656733-657199 ( 64) GCGCGCTACCGACTACGCCACACGCCC 1 chrXI:219640-220117 ( 67) GCGCGCTACCGACTACGCCACACGCCC 1 chrX:197130-197610 ( 39) GCGCGCTACCGACTACGCCACACGCCC 1 chrVII:774089-774702 ( 4) GCGCGCTACCGACTACGCCACACGCCC 1 chrVI:204787-205226 ( 14) GCGCGCTACCGACTACGCCACACGCCC 1 chrXII:214701-215166 ( 46) GCGCGCTACCAACTGCGCCATGTGCCC 1 chrVII:794220-794602 ( 56) GCGCGCTACCAACTGCGCCATGTGCCC 1 chrI:166042-166587 ( 3) GCGCGCTACCAACTGCGCCATGTGCCC 1 chrXIII:258938-259443 ( 73) TCGCCTTAACCACTCGGCCAAGTTGCC 1 chrXII:167750-168241 ( 54) TCGCCTTAACCACTCGGCCAAGTTGCC 1 chrX:523874-524351 ( 5) TCGCCTTAACCACTCGGCCAAGTTGCC 1 chrVIII:132832-133352 ( 39) TCGCCTTAACCACTCGGCCAAGTTGCC 1 chrVII:561439-561950 ( 73) TCGCCTTAACCACTCGGCCAAGTTGCC 1 chrIV:980754-981271 ( 67) TCGCCTTAACCACTCGGCCAAGTTGCC 1 chrIV:437547-438021 ( 38) TCGCCTTAACCACTCGGCCAAGTTGCC 1 chrII:226864-227375 ( 6) TCGCCTTAACCACTCGGCCAAGTTGCC 1 chrI:182355-182776 ( 62) TCGCCTTAACCACTCGGCCAAGTTGCC 1 chrIII:227745-228222 ( 9) TCGCCTTAACCACTCGGCCATAGTGCC 1 chrIV:1150684-1151187 ( 30) TCGCCTTAACCACTCGGCCACTGGGAC 1 chrXIV:602091-602576 ( 29) TGCCTTAACCAACTGGGCCAAGAGACC 1 chrXIV:569670-570152 ( 53) TGCCTTAACCAACTGGGCCAAGAGACC 1 chrV:443028-443494 ( 38) TGCCTTAACCAACTGGGCCAAGAGACC 1 chrXII:605150-605641 ( 61) AAGCTCTAACCACTGAGCTACACGAGC 1 chrIV:884173-884636 ( 7) AAGCTCTAACCACTGAGCTACACGAGC 1 chrXII:731909-732332 ( 20) CGCCTTAAACCACTCGGCCAAACTCCC 1 chrXII:592310-592949 ( 14) CGCCTTAAACCACTCGGCCAAACTCCC 1 chrX:617713-618169 ( 28) CGCCTTAAACCACTCGGCCAAACTCCC 1 chrXV:353841-354328 ( 53) GCGCCTTACCAACTTGGCCATAGAAGC 1 chrXV:113596-113990 ( 59) GCGCCTTACCAACTTGGCCATAGAAGC 1 chrXIV:560545-560993 ( 20) GCGCCTTACCAACTTGGCCATAGAAGC 1 chrX:58946-59399 ( 24) GCGCCTTACCAACTTGGCCATAGAAGC 1 chrVIII:115877-116400 ( 65) GCGCCTTACCAACTTGGCCATAGAAGC 1 chrIV:434042-434546 ( 66) GCGCCTTACCAACTTGGCCATAGAAGC 1 chrXIV:374652-375098 ( 44) GCGCTCTCCCAACTGAGCTAAGTCCGC 1 chrIV:1095173-1095679 ( 59) GCGCTCTCCCAACTGAGCTAAGTCCGC 1 chrXVI:860162-860672 ( 12) TGGATTTTACCACTAAACCACTTGCGC 1 chrXVI:572017-572564 ( 29) TGGATTTTACCACTAAACCACTTGCGC 1 chrXV:281957-282470 ( 1) TGGATTTTACCACTAAACCACTTGCGC 1 chrXV:226420-226896 ( 47) TGGATTTTACCACTAAACCACTTGCGC 1 chrXIII:183757-184195 ( 16) TGGATTTTACCACTAAACCACTTGCGC 1 chrXII:687644-688171 ( 49) TGCCATAACCGACTAGACCACGAAACC 1 chrXI:379452-379966 ( 21) TGCCATAACCGACTAGACCACGAAACC 1 chrXI:307944-308453 ( 43) TGCCATAACCGACTAGACCACGAAACC 1 chrX:396556-397007 ( 39) TGGATTTTACCACTAAACCACTTGCGC 1 chrX:378164-378569 ( 44) TGCCATAACCGACTAGACCACGAAACC 1 chrVIII:85081-85561 ( 74) TGCCATAACCGACTAGACCACGAAACC 1 chrVII:930746-931245 ( 52) TGGATTTTACCACTAAACCACTTGCGC 1 chrVII:876178-876674 ( 18) ACGCGCTACCGATTGCGCCAACAAGGC 1 chrVII:845329-845989 ( 40) TGGATTTTACCACTAAACCACTTGCGC 1 chrVII:823274-823719 ( 36) TGCCATAACCGACTAGACCACGAAACC 1 chrVII:412134-412594 ( 27) TGCCATAACCGACTAGACCACGAAACC 1 chrVII:73594-74114 ( 72) TGCCATAACCGACTAGACCACGAAACC 1 chrVI:226448-226990 ( 65) ACGCGCTACCGATTGCGCCAACAAGGC 1 chrVI:162007-162489 ( 30) TGGATTTTACCACTAAACCACTTGCGC 1 chrV:469254-469659 ( 51) TGCCATAACCGACTAGACCACGAAACC 1 chrV:438491-438982 ( 14) TGCCATAACCGACTAGACCACGAAACC 1 chrV:435609-436022 ( 33) ACGCGCTACCGATTGCGCCAACAAGGC 1 chrIX:300011-300504 ( 67) ACGCGCTACCGATTGCGCCAACAAGGC 1 chrIV:1352293-1352739 ( 46) ACGCGCTACCGATTGCGCCAACAAGGC 1 chrIV:1201502-1202086 ( 6) ACGCGCTACCGATTGCGCCAACAAGGC 1 chrIV:992615-993061 ( 44) TGGATTTTACCACTAAACCACTTGCGC 1 chrIV:83326-83829 ( 21) TGGATTTTACCACTAAACCACTTGCGC 1 chrXVI:622359-622829 ( 61) GCGCTCTCCCAACTGAGCTAAATCCGC 1 chrXV:464239-464714 ( 24) AGAATCATACCACTAGACCACACGCCC 1 chrXIII:195921-196412 ( 28) AGAATCATACCACTAGACCACACGCCC 1 chrXII:92353-92842 ( 1) AGAATCATACCACTAGACCACACGCCC 1 chrVIII:388704-389210 ( 62) AGAATCATACCACTAGACCACACGCCC 1 chrVIII:358278-358783 ( 63) GCGCTCTCCCAACTGAGCTAAATCCGC 1 chrVIII:237694-238132 ( 50) GCGCTCTCCCAACTGAGCTAAATCCGC 1 chrVII:440313-441205 ( 72) GCGCTCTCCCAACTGAGCTAAATCCGC 1 chrVI:157691-158223 ( 74) GCGCTCTCCCAACTGAGCTAAATCCGC 1 chrVI:101144-101630 ( 39) AGAATCATACCACTAGACCACACGCCC 1 chrII:36186-36639 ( 36) GCGCTCTCCCAACTGAGCTAAATCCGC 1 chrI:138917-139361 ( 63) AGAATCATACCACTAGACCACACGCCC 1 chrXIII:504674-505205 ( 6) CGCCTTAGACCGCTCGGCCAAACAACC 1 chrVII:857236-857717 ( 39) CGCCTTAGACCGCTCGGCCAAACAACC 1 chrVII:205315-205787 ( 20) CGCCTTAGACCGCTCGGCCAAACAACC 1 chrXII:962837-963285 ( 18) CGCCTTAGACCACTCGGCCAACCCTCC 1 chrXI:83981-84420 ( 58) CGCCTTAGACCACTCGGCCAACCCTCC 1 chrX:424279-424786 ( 7) CGCCTTAGACCACTCGGCCAACCCTCC 1 chrIV:519543-519961 ( 41) CGCCTTAGACCACTCGGCCAACCCTCC 1 chrII:347400-347898 ( 4) CGCCTTAGACCACTCGGCCAACCCTCC 1 chrXII:875169-875676 ( 4) ACGCTCTACCAACTGAGCTAACAAGGA 1 chrVII:115204-115761 ( 56) ACGCTCTACCAACTGAGCTAACAAGGA 1 chrIV:359370-359840 ( 22) ACGCTCTACCAACTGAGCTAACAAGGA 1 chrXV:594224-594661 ( 7) AAATTCTAACCACTGAACCACTTGCGC 1 chrXV:487218-487752 ( 4) CGCCTTAACCAACTTGGCCATGGAGTC 1 chrXV:228107-228600 ( 28) CGCCTTAACCAACTTGGCCATGGAGTC 1 chrXIV:102489-102949 ( 47) CGCCTTAACCAACTTGGCCATGGAGTC 1 chrVI:137268-137824 ( 37) CGCCTTAACCAACTTGGCCATGGAGTC 1 chrIII:127503-127916 ( 57) CGCCTTAACCAACTTGGCCATGGAGTC 1 chrXV:976202-976668 ( 36) ACGCTCTTCCTACTGAGCTACTGAAGC 1 chrX:422668-423247 ( 30) ACGCTCTTCCTACTGAGCTACTGAAGC 1 chrIV:1175594-1176106 ( 29) ACGCTCTTCCTACTGAGCTACTGAAGC 1 chrXV:340146-340622 ( 11) ACGCCGTGACCATTGGGCCACGAGGAA 1 chrXI:490758-491230 ( 24) ACGCCGTGACCATTGGGCCACGAGGAA 1 chrX:233703-234262 ( 7) ACGCCGTGACCATTGGGCCACGAGGAA 1 chrV:492199-492608 ( 45) ACGCCGTGACCATTGGGCCACGAGGAA 1 chrIV:1256866-1257272 ( 34) GAATTCTAACCACTGAACCACTTTCGC 1 chrXVI:744074-744587 ( 4) AACGCTCTACCACTAAGCTAAGGAGGC 1 chrXIII:807998-808547 ( 69) AAGTGATAACCACTACACTATAGGACC 1 chrXII:448490-448952 ( 24) AAGTGATAACCACTACACTATAGGACC 1 chrVIII:466770-467215 ( 48) AACGCTCTACCACTAAGCTAAGGAGGC 1 chrVIII:134088-134633 ( 11) AAGTGATAACCACTACACTATAGGACC 1 chrVII:1004031-1004435 ( 33) AACGCTCTACCACTAAGCTAAGGAGGC 1 chrVII:661542-662002 ( 27) AACGCTCTACCACTAAGCTAAGGAGGC 1 chrV:250103-250515 ( 27) AAGTGATAACCACTACACTATAGGACC 1 chrIV:802572-802998 ( 41) AAGTGATAACCACTACACTATAGGACC 1 chrIV:520690-521334 ( 10) AAGTGATAACCACTACACTATAGGACC 1 chrIII:168120-168592 ( 40) AAGTGATAACCACTACACTATAGGACC 1 chrXIII:923154-924383 ( 53) GGGTATAGACCACTGAGGCAAGTGCCG 1 chrV:130827-131384 ( 72) AAGTGATAACCACTACACTATAAAACC 1 chrII:350610-351133 ( 6) AAGTGATAACCACTACACTATAAAACC 1 chrXIV:631702-632137 ( 22) AGAATCATACCTCTAGACCACACGCCC 1 chrVII:706923-707342 ( 71) GCTGCGCTACCACTGCGCCATACGAGC 1 chrIII:123364-123835 ( 73) AGAATCATACCTCTAGACCACACGCCC 1 chrII:642849-643301 ( 27) GCTGCGCTACCACTGCGCCATACGAGC 1 chrII:326578-327140 ( 30) CGTCTTGAACCACTGGACCATTGGACC 1 chrXIII:131608-132109 ( 62) GACGCGTTGCCATTACGCCACGCGAGC 1 chrVII:736178-736551 ( 26) GACGCGTTGCCATTACGCCACGCGAGC 1 chrII:405596-406211 ( 25) GACGCGTTGCCATTACGCCACGCGAGC 1 chrXI:0-1061 ( 69) GGGTATAAACCGCTGAGGCAAGTGCCG 1 chrXIII:362826-363283 ( 60) GTGTACTAACCACTATACTAAGATGGC 1 chrVIII:62562-62930 ( 59) GTGTACTAACCACTATACTAAGATGGC 1 chrVII:110384-110927 ( 65) GTGTACTAACCACTATACTAAGATGGC 1 chrV:434376-434768 ( 64) GTGTACTAACCACTATACTAAGATGGC 1 chrV:207122-207658 ( 17) GTGTACTAACCACTATACTAAGATGGC 1 chrX:538338-538826 ( 23) GACGCGTTACCATTACGCCAACGGAAC 1 chrIV:1524094-1525690 ( 15) GGGTATAGACCGCTGAGGCAAGTGCCG 1 chrIII:1-1736 ( 22) GGGTATAGACCGCTGAGGCAAGTGCCG 1 chrI:229100-230196 ( 47) GGGTATAGACCGCTGAGGCAAGTGCCG 1 chrI:1-1134 ( 26) GGGTATAGACCGCTGAGGCAAGTGCCG 1 chrXV:287994-288427 ( 32) GCCTTAAACCAACTTGGCTACCGAGAG 1 chrXIII:837698-838214 ( 22) GCCTTAAACCAACTTGGCTACCGAGAG 1 chrXIII:168611-169072 ( 4) GCCTTAAACCAACTTGGCTACCGAGAG 1 chrX:542753-543282 ( 51) GCCTTAAACCAACTTGGCTACCGAGAG 1 chrVI:210454-210899 ( 55) GCCTTAAACCAACTTGGCTACCGAGAG 1 chrVI:167214-167698 ( 31) GCCTTAAACCAACTTGGCTACCGAGAG 1 chrXI:99351-100017 ( 22) GGGAACATCCCGCTGTACTATGCGGTC 1 chrXV:571745-572187 ( 42) CCATTCTGACCATTAAACTATCACGGA 1 chrXI:513188-513630 ( 18) CCATTCTGACCATTAAACTATCACGGA 1 chrX:374192-374788 ( 29) CCATTCTGACCATTAAACTATCACGGA 1 chrVII:544357-544906 ( 41) CCATTCTGACCATTAAACTATCACGGA 1 chrVII:531405-531808 ( 54) CCATTCTGACCATTAAACTATCACGGA 1 chrIX:336116-336636 ( 68) CCATTCTGACCATTAAACTATCACGGA 1 chrIX:324145-324623 ( 14) CCATTCTGACCATTAAACTATCACGGA 1 chrIV:568693-569266 ( 35) CCATTCTGACCATTAAACTATCACGGA 1 chrXVI:338677-339132 ( 39) TGCGCGCTTCCACTGCGCCACGGCGCT 1 chrXV:710003-710497 ( 1) TGCGCGCTTCCACTGCGCCACGGCGCT 1 chrX:517644-518074 ( 49) TGCGCGCTTCCACTGCGCCACGGCGCT 1 chrXII:489274-489589 ( 38) TATGGTCACCCACTACACTACTCGGTC 1 chrXII:468759-468993 ( 57) TATGGTCACCCACTACACTACTCGGTC 1 chrIV:1075308-1075750 ( 39) ACGTGATAGCCGCTACACTATTGGAAC 1 chrV:135136-135687 ( 3) CAGTAATGACAGCTCTGCTATTCGCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NSSCTYWAMCCACTRVRCYAHVNRVSC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 27 n= 40774 bayes= 7.42434 E= 4.7e-462 -24 -19 72 -27 -101 120 99 -327 -143 63 155 -327 -127 148 -98 -35 -107 20 -8 55 -151 92 -119 53 5 -143 -489 96 83 -189 -19 -43 83 109 -289 -401 -1393 240 -1393 -1393 -47 168 -37 -401 156 -1393 -143 -459 -1393 218 -1393 -114 -1393 -1393 -1393 169 51 -37 66 -151 -4 32 113 -279 26 -1393 172 -1393 -1393 234 -230 -1393 -1393 180 -1393 13 169 -1393 -1393 -1393 21 106 -1393 -35 -4 -3 97 -114 -24 32 40 -31 -1 -31 113 -135 -14 72 97 -327 -189 128 109 -259 -169 209 -131 -401 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NSSCTYWAMCCACTRVRCYAHVNRVSC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 27 nsites= 156 E= 4.7e-462 0.262821 0.166667 0.314103 0.256410 0.153846 0.435897 0.378205 0.032051 0.115385 0.294872 0.557692 0.032051 0.128205 0.532051 0.096154 0.243590 0.147436 0.217949 0.179487 0.455128 0.108974 0.358974 0.083333 0.448718 0.320513 0.070513 0.006410 0.602564 0.551282 0.051282 0.166667 0.230769 0.551282 0.403846 0.025641 0.019231 0.000000 1.000000 0.000000 0.000000 0.224359 0.608974 0.147436 0.019231 0.916667 0.000000 0.070513 0.012821 0.000000 0.858974 0.000000 0.141026 0.000000 0.000000 0.000000 1.000000 0.442308 0.147436 0.301282 0.108974 0.301282 0.237179 0.416667 0.044872 0.371795 0.000000 0.628205 0.000000 0.000000 0.961538 0.038462 0.000000 0.000000 0.660256 0.000000 0.339744 1.000000 0.000000 0.000000 0.000000 0.358974 0.397436 0.000000 0.243590 0.301282 0.185897 0.371795 0.141026 0.262821 0.237179 0.250000 0.250000 0.307692 0.153846 0.416667 0.121795 0.282051 0.314103 0.371795 0.032051 0.083333 0.461538 0.403846 0.051282 0.096154 0.807692 0.076923 0.019231 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NSSCTYWAMCCACTRVRCYAHVNRVSC MEME-2 regular expression -------------------------------------------------------------------------------- [GAT][CG][GC][CT][TC][TC][TA][AT][AC]C[CA]ACT[AG][GAC][GA]C[CT]A[CAT][GA][AGTC][GA][GCA][CG]C -------------------------------------------------------------------------------- Time 556.95 secs. ******************************************************************************** ******************************************************************************** MOTIF KGKTAAGGCGYMWGACTNBTAATCWSWAG MEME-3 width = 29 sites = 25 llr = 571 E-value = 1.8e-089 ******************************************************************************** -------------------------------------------------------------------------------- Motif KGKTAAGGCGYMWGACTNBTAATCWSWAG MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::a8:2::144:9::2:1aa::3:572 pos.-specific C 22:2:12:8:4422:8:24:::18:4::: probability G 486::288:a:2:812:233:::2242:8 matrix T 5:48::::2:6:3:::a446::9:4233: bits 2.4 2.2 * 1.9 * 1.7 * * * * * ** ** * Relative 1.4 * * **** **** **** * Entropy 1.2 **** **** **** **** * (32.9 bits) 1.0 ********* **** **** * 0.7 *********** **** ***** * ** 0.5 ************ **** ****** **** 0.2 ***************** *********** 0.0 ----------------------------- Multilevel TGGTAAGGCGTCAGACTTCTAATCTGAAG consensus GCT CAT CATC G ATG GACTTA sequence GC CG G G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGKTAAGGCGYMWGACTNBTAATCWSWAG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chrXI:162246-162748 - 68 1.98e-13 GTAA TGGCAACGCGTCTGACTTCTAATCAGAAG ATTATGGGTT chrVII:405264-405799 + 4 1.98e-13 TAA TGGCAACGCGTCTGACTTCTAATCAGAAG ATTATGGGTT chrXVI:810470-811010 + 3 2.32e-13 TT GGTTAAGGCGTGCGACTGTTAATCGCAAG ATCGTGAGTT chrXIV:632405-632902 + 13 2.32e-13 TGGCCAAGTT GGTTAAGGCGTGCGACTGTTAATCGCAAG ATCGTGAGTT chrXII:975750-976249 - 62 2.32e-13 TGGCCAAGTT GGTTAAGGCGTGCGACTGTTAATCGCAAG ATCGTGAGTT chrXI:74418-74949 + 8 2.32e-13 CCAAGTT GGTTAAGGCGTGCGACTGTTAATCGCAAG ATCGTGAGTT chrVII:730945-731455 + 4 2.32e-13 GTT GGTTAAGGCGTGCGACTGTTAATCGCAAG ATCGTGAGTT chrXIV:104611-105126 + 3 6.58e-13 GT TGGTAAGGCGCCACACTAGTAATGTGGAG ATCATCGGTT chrIX:325512-326108 + 4 6.58e-13 AGT TGGTAAGGCGCCACACTAGTAATGTGGAG ATCATCGGTT chrIX:174822-175355 + 9 6.58e-13 GGCCAAGT TGGTAAGGCGCCACACTAGTAATGTGGAG ATCATCGGTT chrII:266178-266683 + 14 6.58e-13 ATGGCCAAGT TGGTAAGGCGCCACACTAGTAATGTGGAG ATCATCGGTT chrXVI:689369-689879 + 7 1.76e-11 CCGAGT GGTTAAGGCGACAGACTTGAAATCTGTTG GGCTCTGCCC chrXVI:581823-582424 + 5 1.76e-11 CAAT CGGTAGCGCGTATGACTCTTAATCATAAG GTTAGGGGTT chrXIII:480396-480872 - 65 1.76e-11 GCGCAAT CGGTAGCGCGTATGACTCTTAATCATAAG GTTAGGGGTT chrX:414779-415267 + 9 1.76e-11 GGCGCAAT CGGTAGCGCGTATGACTCTTAATCATAAG GTTAGGGGTT chrVII:122032-122636 + 1 1.76e-11 . CGGTAGCGCGTATGACTCTTAATCATAAG GTTAGGGGTT chrV:288214-288715 - 66 1.76e-11 CCGAGT GGTTAAGGCGACAGACTTGAAATCTGTTG GGCTCTGCCC chrXII:374199-374638 + 3 1.57e-10 AT GGTCACGGCGTCTGGCTACGAACCAGAAG ATTCCAGGTT chrIV:619691-620266 - 69 1.57e-10 AAT GGTCACGGCGTCTGGCTACGAACCAGAAG ATTCCAGGTT chrXII:628173-628751 + 50 6.36e-10 TACTCAGGTA TCGTAAGATGCAAGAGTTCGAATCTCTTA GCAACCATTA chrXI:458354-458985 + 16 6.36e-10 TACTCAGGTA TCGTAAGATGCAAGAGTTCGAATCTCTTA GCAACCATAT chrVII:422878-423534 + 14 6.36e-10 TACTCAGGTA TCGTAAGATGCAAGAGTTCGAATCTCTTA GCAACCATTA chrIV:1461468-1462067 - 5 6.36e-10 TACTCAGGTA TCGTAAGATGCAAGAGTTCGAATCTCTTA GCAA chrI:180926-181487 + 63 6.36e-10 TACTCAGGTA TCGTAAGATGCAAGAGTTCGAATCTCTTA GCAACCATT chrXI:46486-47014 - 63 2.48e-09 TTGGCCAAG TGGTAAGGCATCGCACTCGTAATGCGGGG ATCGTGGGTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGKTAAGGCGYMWGACTNBTAATCWSWAG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrXI:162246-162748 2e-13 67_[-3]_4 chrVII:405264-405799 2e-13 3_[+3]_68 chrXVI:810470-811010 2.3e-13 2_[+3]_69 chrXIV:632405-632902 2.3e-13 12_[+3]_59 chrXII:975750-976249 2.3e-13 61_[-3]_10 chrXI:74418-74949 2.3e-13 7_[+3]_64 chrVII:730945-731455 2.3e-13 3_[+3]_68 chrXIV:104611-105126 6.6e-13 2_[+3]_69 chrIX:325512-326108 6.6e-13 3_[+3]_68 chrIX:174822-175355 6.6e-13 8_[+3]_63 chrII:266178-266683 6.6e-13 13_[+3]_58 chrXVI:689369-689879 1.8e-11 6_[+3]_65 chrXVI:581823-582424 1.8e-11 4_[+3]_67 chrXIII:480396-480872 1.8e-11 64_[-3]_7 chrX:414779-415267 1.8e-11 8_[+3]_63 chrVII:122032-122636 1.8e-11 [+3]_71 chrV:288214-288715 1.8e-11 65_[-3]_6 chrXII:374199-374638 1.6e-10 2_[+3]_69 chrIV:619691-620266 1.6e-10 68_[-3]_3 chrXII:628173-628751 6.4e-10 49_[+3]_22 chrXI:458354-458985 6.4e-10 15_[+3]_56 chrVII:422878-423534 6.4e-10 13_[+3]_58 chrIV:1461468-1462067 6.4e-10 4_[-3]_67 chrI:180926-181487 6.4e-10 62_[+3]_9 chrXI:46486-47014 2.5e-09 62_[-3]_9 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGKTAAGGCGYMWGACTNBTAATCWSWAG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KGKTAAGGCGYMWGACTNBTAATCWSWAG width=29 seqs=25 chrXI:162246-162748 ( 68) TGGCAACGCGTCTGACTTCTAATCAGAAG 1 chrVII:405264-405799 ( 4) TGGCAACGCGTCTGACTTCTAATCAGAAG 1 chrXVI:810470-811010 ( 3) GGTTAAGGCGTGCGACTGTTAATCGCAAG 1 chrXIV:632405-632902 ( 13) GGTTAAGGCGTGCGACTGTTAATCGCAAG 1 chrXII:975750-976249 ( 62) GGTTAAGGCGTGCGACTGTTAATCGCAAG 1 chrXI:74418-74949 ( 8) GGTTAAGGCGTGCGACTGTTAATCGCAAG 1 chrVII:730945-731455 ( 4) GGTTAAGGCGTGCGACTGTTAATCGCAAG 1 chrXIV:104611-105126 ( 3) TGGTAAGGCGCCACACTAGTAATGTGGAG 1 chrIX:325512-326108 ( 4) TGGTAAGGCGCCACACTAGTAATGTGGAG 1 chrIX:174822-175355 ( 9) TGGTAAGGCGCCACACTAGTAATGTGGAG 1 chrII:266178-266683 ( 14) TGGTAAGGCGCCACACTAGTAATGTGGAG 1 chrXVI:689369-689879 ( 7) GGTTAAGGCGACAGACTTGAAATCTGTTG 1 chrXVI:581823-582424 ( 5) CGGTAGCGCGTATGACTCTTAATCATAAG 1 chrXIII:480396-480872 ( 65) CGGTAGCGCGTATGACTCTTAATCATAAG 1 chrX:414779-415267 ( 9) CGGTAGCGCGTATGACTCTTAATCATAAG 1 chrVII:122032-122636 ( 1) CGGTAGCGCGTATGACTCTTAATCATAAG 1 chrV:288214-288715 ( 66) GGTTAAGGCGACAGACTTGAAATCTGTTG 1 chrXII:374199-374638 ( 3) GGTCACGGCGTCTGGCTACGAACCAGAAG 1 chrIV:619691-620266 ( 69) GGTCACGGCGTCTGGCTACGAACCAGAAG 1 chrXII:628173-628751 ( 50) TCGTAAGATGCAAGAGTTCGAATCTCTTA 1 chrXI:458354-458985 ( 16) TCGTAAGATGCAAGAGTTCGAATCTCTTA 1 chrVII:422878-423534 ( 14) TCGTAAGATGCAAGAGTTCGAATCTCTTA 1 chrIV:1461468-1462067 ( 5) TCGTAAGATGCAAGAGTTCGAATCTCTTA 1 chrI:180926-181487 ( 63) TCGTAAGATGCAAGAGTTCGAATCTCTTA 1 chrXI:46486-47014 ( 63) TGGTAAGGCATCGCACTCGTAATGCGGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGKTAAGGCGYMWGACTNBTAATCWSWAG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 39672 bayes= 9.46129 E= 1.8e-089 -1129 -25 92 63 -1129 7 207 -1129 -1129 -1129 175 22 -1129 -25 -1129 144 169 -1129 -1129 -1129 129 -125 -25 -1129 -1129 34 200 -1129 -63 -1129 207 -1129 -1129 207 -1129 -63 -295 -1129 234 -1129 -195 92 -1129 85 22 121 7 -1129 51 7 -225 5 -1129 7 207 -1129 157 -1129 -125 -1129 -1129 207 7 -1129 -1129 -1129 -1129 169 -37 7 7 22 -1129 92 56 22 -195 -1129 56 105 169 -1129 -1129 -1129 169 -1129 -1129 -1129 -1129 -125 -1129 157 -1129 207 7 -1129 5 -225 7 51 -1129 107 121 -95 75 -1129 7 -15 113 -1129 -225 -15 -63 -1129 207 -1129 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGKTAAGGCGYMWGACTNBTAATCWSWAG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 25 E= 1.8e-089 0.000000 0.160000 0.360000 0.480000 0.000000 0.200000 0.800000 0.000000 0.000000 0.000000 0.640000 0.360000 0.000000 0.160000 0.000000 0.840000 1.000000 0.000000 0.000000 0.000000 0.760000 0.080000 0.160000 0.000000 0.000000 0.240000 0.760000 0.000000 0.200000 0.000000 0.800000 0.000000 0.000000 0.800000 0.000000 0.200000 0.040000 0.000000 0.960000 0.000000 0.080000 0.360000 0.000000 0.560000 0.360000 0.440000 0.200000 0.000000 0.440000 0.200000 0.040000 0.320000 0.000000 0.200000 0.800000 0.000000 0.920000 0.000000 0.080000 0.000000 0.000000 0.800000 0.200000 0.000000 0.000000 0.000000 0.000000 1.000000 0.240000 0.200000 0.200000 0.360000 0.000000 0.360000 0.280000 0.360000 0.080000 0.000000 0.280000 0.640000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.080000 0.000000 0.920000 0.000000 0.800000 0.200000 0.000000 0.320000 0.040000 0.200000 0.440000 0.000000 0.400000 0.440000 0.160000 0.520000 0.000000 0.200000 0.280000 0.680000 0.000000 0.040000 0.280000 0.200000 0.000000 0.800000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGKTAAGGCGYMWGACTNBTAATCWSWAG MEME-3 regular expression -------------------------------------------------------------------------------- [TG][GC][GT]TAA[GC][GA][CT]G[TC][CAG][ATC][GC]A[CG]T[TACG][CTG][TG]AAT[CG][TAG][GC][ATG][AT][GA] -------------------------------------------------------------------------------- Time 794.35 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrI:1-1134 2.07e-03 25_[-2(1.14e-06)]_48 chrI:71796-73668 5.50e-01 100 chrI:81880-82346 4.07e-01 100 chrI:138917-139361 1.56e-05 62_[-2(6.76e-09)]_11 chrI:166042-166587 7.84e-16 2_[-2(1.39e-11)]_18_[+1(1.05e-10)]_\ 29 chrI:180926-181487 4.38e-07 62_[+3(6.36e-10)]_9 chrI:182355-182776 3.33e-16 10_[-1(1.46e-07)]_27_[+2(4.07e-11)]_\ 12 chrI:229100-230196 3.22e-04 46_[+2(1.14e-06)]_27 chrII:9369-10014 9.12e-01 100 chrII:36186-36639 6.44e-05 35_[-2(6.76e-09)]_38 chrII:44939-45397 5.84e-01 100 chrII:60727-61297 5.49e-01 100 chrII:88932-90268 2.14e-01 100 chrII:159468-160056 6.03e-01 100 chrII:165048-165489 1.23e-01 100 chrII:167850-168390 4.54e-02 100 chrII:181282-181694 7.98e-01 100 chrII:197220-197878 3.87e-09 11_[+3(4.12e-06)]_[+1(5.38e-10)]_36 chrII:226864-227375 3.33e-16 5_[-2(4.07e-11)]_27_[+1(1.46e-07)]_\ 17 chrII:266178-266683 2.51e-13 13_[+3(6.58e-13)]_[+1(3.47e-08)]_34 chrII:301128-301630 8.09e-01 100 chrII:326578-327140 2.27e-05 29_[+2(5.94e-07)]_44 chrII:332209-334064 4.81e-02 100 chrII:347400-347898 6.93e-10 3_[-2(1.87e-08)]_29_[+1(5.12e-07)]_\ 17 chrII:350610-351133 1.43e-09 5_[-2(3.51e-07)]_17_[+1(1.48e-09)]_\ 27 chrII:405596-406211 1.67e-18 39_[+3(1.98e-13)]_[+1(3.30e-09)]_8 chrII:415456-415928 9.36e-02 100 chrII:476829-477739 8.44e-02 3_[-3(5.39e-05)]_68 chrII:504483-504761 5.88e-01 100 chrII:544529-544865 9.39e-01 100 chrII:592351-593430 6.30e-01 100 chrII:604062-607100 6.46e-01 100 chrII:642849-643301 8.13e-07 26_[+2(4.20e-07)]_47 chrII:644953-645430 3.07e-08 25_[-2(9.50e-05)]_17_[+1(2.23e-09)]_\ 7 chrII:680300-682243 8.24e-01 100 chrIII:1-1736 2.29e-03 21_[-2(1.14e-06)]_52 chrIII:11086-11546 9.23e-01 100 chrIII:13970-15194 6.40e-01 100 chrIII:58672-59075 9.98e-01 100 chrIII:68248-68656 9.86e-01 100 chrIII:78406-78705 8.11e-01 100 chrIII:82363-82752 9.96e-01 100 chrIII:123364-123835 1.02e-12 31_[-1(4.58e-13)]_17_[+2(4.20e-07)]_\ 1 chrIII:127503-127916 1.68e-04 56_[-2(3.77e-08)]_17 chrIII:142243-143130 1.32e-07 68_[-1(8.31e-12)]_8 chrIII:163435-163910 2.73e-01 100 chrIII:168120-168592 3.83e-06 [+1(3.02e-05)]_15_[+2(1.23e-07)]_34 chrIII:177075-178811 7.25e-01 100 chrIII:227745-228222 3.06e-09 8_[-2(1.10e-10)]_65 chrIII:236449-236665 9.25e-01 100 chrIII:262602-263043 2.35e-01 100 chrIII:294909-295927 4.94e-01 100 chrIII:315621-316620 3.90e-01 100 chrIV:7-388 1.70e-01 100 chrIV:83326-83829 1.25e-13 20_[-2(5.16e-09)]_16_[+1(8.31e-12)]_\ 13 chrIV:117113-118183 4.56e-01 100 chrIV:129959-131000 8.47e-01 100 chrIV:216688-218057 7.21e-02 100 chrIV:221432-222362 8.96e-01 100 chrIV:229420-230744 8.17e-01 100 chrIV:307989-308684 8.38e-02 100 chrIV:321603-322000 9.44e-01 100 chrIV:340408-341927 2.60e-01 100 chrIV:358046-358456 4.34e-01 100 chrIV:359370-359840 1.14e-06 21_[-2(2.11e-08)]_52 chrIV:392587-392835 7.53e-01 100 chrIV:410165-410749 9.51e-06 16_[+1(5.42e-09)]_60 chrIV:411209-411692 2.51e-01 100 chrIV:434042-434546 1.04e-19 23_[-1(3.47e-08)]_[-3(6.58e-13)]_24 chrIV:437547-438021 7.30e-12 37_[-2(4.07e-11)]_36 chrIV:488432-489157 2.46e-06 56_[-1(1.95e-09)]_20 chrIV:490288-492612 5.18e-01 100 chrIV:519543-519961 1.65e-06 40_[-2(1.87e-08)]_33 chrIV:520690-521334 1.35e-10 9_[-2(1.23e-07)]_17_[+1(3.38e-10)]_\ 23 chrIV:538902-539468 5.46e-01 100 chrIV:568693-569266 1.49e-03 34_[-2(4.49e-06)]_39 chrIV:578866-580697 9.30e-01 100 chrIV:619691-620266 4.80e-12 44_[-1(2.90e-09)]_[-3(1.57e-10)]_3 chrIV:644884-645407 1.22e-06 61_[-1(3.38e-10)]_15 chrIV:667703-668262 8.67e-01 100 chrIV:802572-802998 4.62e-06 1_[+1(3.02e-05)]_15_[+2(1.23e-07)]_\ 33 chrIV:835734-836323 2.17e-01 100 chrIV:884173-884636 2.63e-06 6_[-2(3.26e-10)]_67 chrIV:946128-946624 4.58e-05 46_[+1(1.46e-07)]_30 chrIV:980754-981271 3.33e-16 15_[-1(1.46e-07)]_27_[+2(4.07e-11)]_\ 7 chrIV:992615-993061 6.63e-06 43_[-2(5.16e-09)]_30 chrIV:1013428-1014020 8.15e-01 100 chrIV:1016965-1017503 2.01e-08 26_[-1(3.38e-10)]_17_[+2(6.75e-05)]_\ 6 chrIV:1062822-1063084 5.37e-01 100 chrIV:1075308-1075750 2.00e-02 38_[+2(7.44e-06)]_35 chrIV:1095173-1095679 4.94e-05 58_[+2(2.95e-09)]_15 chrIV:1150684-1151187 1.57e-06 29_[+2(1.59e-10)]_44 chrIV:1175594-1176106 8.31e-10 28_[-2(6.55e-08)]_18_[+1(1.85e-07)]_\ 3 chrIV:1201502-1202086 9.33e-19 21_[+3(1.76e-11)]_[+1(2.54e-09)]_26 chrIV:1256866-1257272 4.99e-06 33_[+2(9.00e-08)]_40 chrIV:1278617-1279139 3.20e-01 100 chrIV:1300709-1302496 1.03e-01 100 chrIV:1305398-1306002 5.19e-05 34_[+1(1.46e-07)]_42 chrIV:1352293-1352739 9.33e-19 3_[-1(2.54e-09)]_[-3(1.76e-11)]_44 chrIV:1355686-1356245 8.42e-01 100 chrIV:1359369-1361125 2.88e-01 100 chrIV:1401053-1403394 1.54e-01 100 chrIV:1449735-1451467 9.02e-01 100 chrIV:1461468-1462067 4.38e-07 4_[-3(6.36e-10)]_67 chrIV:1524094-1525690 2.07e-03 14_[+2(1.14e-06)]_59 chrIX:0-282 3.09e-01 100 chrIX:67766-69558 3.73e-01 100 chrIX:99052-100066 6.23e-01 100 chrIX:131811-132103 7.73e-01 100 chrIX:174822-175355 2.46e-13 8_[+3(6.58e-13)]_[+1(3.47e-08)]_39 chrIX:183295-183804 4.70e-01 100 chrIX:197353-197788 1.45e-02 71_[-2(6.75e-05)]_2 chrIX:210507-210963 4.95e-06 25_[+1(5.38e-10)]_51 chrIX:232715-232997 9.88e-01 100 chrIX:248600-249400 9.52e-01 100 chrIX:254078-254582 5.60e-02 57_[+3(4.96e-05)]_14 chrIX:257299-258322 2.66e-01 100 chrIX:300011-300504 9.33e-19 24_[-1(2.54e-09)]_[-3(1.76e-11)]_23 chrIX:316108-318253 4.43e-01 100 chrIX:324145-324623 1.19e-02 13_[+2(4.49e-06)]_60 chrIX:325512-326108 2.51e-13 3_[+3(6.58e-13)]_[+1(3.47e-08)]_44 chrIX:326326-326545 3.51e-02 100 chrIX:336116-336636 5.72e-08 26_[-1(5.42e-09)]_17_[+2(4.49e-06)]_\ 6 chrIX:370122-370642 9.51e-01 100 chrIX:382118-382450 1.75e-01 100 chrIX:438327-439887 7.12e-01 100 chrM:6787-6945 9.71e-01 100 chrM:58227-58994 2.76e-01 100 chrM:59551-60022 9.91e-01 100 chrM:60502-60936 9.94e-01 100 chrV:6127-6706 5.23e-01 100 chrV:33790-34021 7.65e-01 100 chrV:42095-42672 3.54e-01 100 chrV:53464-53952 2.98e-01 100 chrV:61063-62184 2.85e-01 100 chrV:67158-69377 4.25e-01 100 chrV:85088-86967 3.75e-02 33_[+3(2.77e-05)]_38 chrV:99816-100366 3.27e-01 100 chrV:110486-110918 3.04e-01 100 chrV:117606-118291 6.80e-01 100 chrV:130827-131384 2.32e-09 30_[-1(1.48e-09)]_17_[+2(3.51e-07)]_\ 2 chrV:135136-135687 5.02e-08 2_[-2(1.25e-05)]_38_[-1(2.54e-09)]_\ 9 chrV:138438-139972 3.60e-01 100 chrV:140162-140924 4.63e-01 100 chrV:141079-141284 7.38e-01 100 chrV:176879-177407 3.07e-08 5_[-2(9.50e-05)]_17_[+1(2.23e-09)]_\ 27 chrV:207122-207658 9.66e-08 16_[-2(8.30e-07)]_17_[+1(2.16e-07)]_\ 16 chrV:250103-250515 1.35e-10 26_[-2(1.23e-07)]_17_[+1(3.38e-10)]_\ 6 chrV:269193-270730 9.90e-01 100 chrV:288214-288715 2.21e-11 32_[-1(4.47e-07)]_9_[-3(1.76e-11)]_\ 6 chrV:305756-306883 1.42e-01 2_[+1(7.61e-05)]_74 chrV:311734-312308 2.11e-06 55_[-1(1.05e-10)]_21 chrV:354696-355400 4.46e-01 100 chrV:362096-363281 9.39e-01 100 chrV:396167-397985 9.40e-01 100 chrV:423046-423975 8.61e-01 100 chrV:430993-431564 1.07e-02 10_[-1(1.26e-05)]_66 chrV:434376-434768 9.66e-08 22_[-1(2.16e-07)]_17_[+2(8.30e-07)]_\ 10 chrV:435609-436022 8.80e-13 14_[-3(1.76e-11)]_57 chrV:438491-438982 3.33e-11 13_[-2(5.16e-09)]_19_[+1(9.73e-10)]_\ 17 chrV:441794-442619 9.13e-01 100 chrV:443028-443494 3.93e-09 37_[+2(1.91e-10)]_36 chrV:469254-469659 1.13e-05 50_[-2(5.16e-09)]_23 chrV:487070-487616 1.21e-06 41_[-1(2.23e-09)]_35 chrV:491111-491408 2.14e-01 100 chrV:492199-492608 1.33e-16 2_[-1(2.90e-09)]_[-3(1.57e-10)]_45 chrV:522689-523022 1.23e-01 100 chrV:550953-551567 6.29e-01 100 chrVI:4451-6027 5.19e-01 100 chrVI:64173-65400 2.48e-01 100 chrVI:95453-95928 2.18e-01 100 chrVI:101144-101630 1.78e-05 38_[-2(6.76e-09)]_35 chrVI:106570-106897 4.61e-01 100 chrVI:137268-137824 7.48e-14 17_[-3(2.32e-13)]_54 chrVI:157691-158223 2.96e-08 12_[-1(7.55e-07)]_37_[+2(6.76e-09)] chrVI:162007-162489 1.25e-13 29_[-2(5.16e-09)]_16_[+1(8.31e-12)]_\ 4 chrVI:167214-167698 3.64e-04 30_[-2(1.45e-06)]_43 chrVI:180641-181283 1.43e-07 65_[-1(8.31e-12)]_11 chrVI:191310-191812 4.04e-05 5_[-1(5.84e-07)]_71 chrVI:204787-205226 4.12e-09 13_[+2(2.55e-12)]_60 chrVI:210454-210899 1.43e-04 54_[+2(1.45e-06)]_19 chrVI:221357-222162 7.28e-01 100 chrVI:223276-224181 2.23e-01 100 chrVI:226448-226990 9.33e-19 22_[-1(2.54e-09)]_[-3(1.76e-11)]_25 chrVI:269383-270160 1.08e-01 100 chrVII:8-1142 2.10e-01 100 chrVII:73594-74114 3.33e-11 28_[-1(9.73e-10)]_19_[+2(5.16e-09)]_\ 2 chrVII:110384-110927 9.66e-08 23_[-1(2.16e-07)]_17_[+2(8.30e-07)]_\ 9 chrVII:115204-115761 1.54e-06 55_[-2(2.11e-08)]_18 chrVII:122032-122636 2.47e-13 [+3(1.76e-11)]_[+1(2.54e-09)]_47 chrVII:148254-149564 8.89e-01 100 chrVII:185378-185967 3.60e-01 100 chrVII:205315-205787 1.23e-04 19_[-2(1.29e-08)]_54 chrVII:254116-254706 4.72e-01 100 chrVII:276970-278733 2.66e-01 100 chrVII:287113-287667 3.38e-04 13_[-1(4.22e-08)]_63 chrVII:291548-292019 1.57e-01 100 chrVII:310475-312263 9.61e-01 100 chrVII:319577-320128 1.25e-03 22_[+1(2.16e-07)]_54 chrVII:328362-329185 8.01e-01 100 chrVII:345852-346591 5.40e-02 100 chrVII:352245-352570 3.64e-01 100 chrVII:364911-366706 9.55e-01 100 chrVII:370784-371630 3.34e-02 100 chrVII:401384-401784 1.27e-02 37_[+2(9.50e-05)]_36 chrVII:405264-405799 8.29e-15 3_[+3(1.98e-13)]_[+1(3.30e-09)]_44 chrVII:412134-412594 2.14e-05 26_[+2(5.16e-09)]_47 chrVII:422878-423534 5.08e-07 13_[+3(6.36e-10)]_58 chrVII:438290-439817 8.89e-01 100 chrVII:440313-441205 2.96e-08 10_[-1(7.55e-07)]_37_[+2(6.76e-09)]_\ 2 chrVII:479176-482783 1.65e-01 100 chrVII:483345-483662 1.14e-02 33_[+1(1.60e-05)]_43 chrVII:531405-531808 6.31e-04 53_[-2(4.49e-06)]_20 chrVII:533869-535227 7.07e-01 100 chrVII:541609-542190 3.07e-08 [-2(9.50e-05)]_17_[+1(2.23e-09)]_32 chrVII:544357-544906 1.49e-03 40_[+2(4.49e-06)]_33 chrVII:545169-545792 5.65e-01 100 chrVII:555125-555901 5.49e-01 100 chrVII:561439-561950 3.33e-16 21_[-1(1.46e-07)]_27_[+2(4.07e-11)]_\ 1 chrVII:592497-592920 1.74e-01 100 chrVII:648822-649379 9.81e-01 100 chrVII:661542-662002 2.86e-10 26_[-2(1.23e-07)]_17_[+1(3.89e-07)]_\ 6 chrVII:700471-701263 5.64e-01 100 chrVII:706923-707342 1.02e-11 29_[-1(3.14e-08)]_17_[+2(4.20e-07)]_\ 3 chrVII:726365-726835 9.85e-01 100 chrVII:730945-731455 7.94e-14 3_[+3(2.32e-13)]_[+1(5.59e-08)]_44 chrVII:736178-736551 1.67e-18 40_[+3(1.98e-13)]_[+1(3.30e-09)]_7 chrVII:738932-739498 4.88e-06 2_[+1(5.38e-10)]_74 chrVII:774089-774702 8.30e-14 3_[-2(2.55e-12)]_18_[+1(5.42e-09)]_\ 28 chrVII:779241-779928 7.28e-01 100 chrVII:788268-788767 7.90e-01 100 chrVII:794220-794602 1.38e-08 55_[-2(1.39e-11)]_18 chrVII:823274-823719 3.34e-05 35_[-2(5.16e-09)]_38 chrVII:828449-828999 1.84e-05 52_[-1(3.30e-09)]_24 chrVII:845329-845989 6.63e-06 39_[-2(5.16e-09)]_34 chrVII:856676-857048 3.62e-02 100 chrVII:857236-857717 1.09e-04 38_[+2(1.29e-08)]_35 chrVII:876178-876674 9.33e-19 33_[+3(1.76e-11)]_[+1(2.54e-09)]_14 chrVII:878562-879061 2.63e-02 27_[+2(2.47e-05)]_46 chrVII:882378-883904 1.75e-01 100 chrVII:919908-920297 4.99e-01 100 chrVII:930746-931245 1.25e-13 11_[-1(8.31e-12)]_16_[+2(5.16e-09)]_\ 22 chrVII:1000275-1000730 4.02e-01 100 chrVII:1004031-1004435 2.86e-10 32_[-2(1.23e-07)]_17_[+1(3.89e-07)] chrVII:1011148-1011444 3.50e-01 100 chrVIII:21-178 9.03e-01 100 chrVIII:34513-36348 6.61e-01 100 chrVIII:62562-62930 2.07e-03 58_[-2(8.30e-07)]_15 chrVIII:74902-75899 2.91e-01 100 chrVIII:76084-76512 1.09e-02 35_[-3(2.65e-05)]_36 chrVIII:85081-85561 3.33e-11 30_[-1(9.73e-10)]_19_[+2(5.16e-09)] chrVIII:103867-105529 4.76e-01 100 chrVIII:115877-116400 1.04e-19 22_[-1(3.47e-08)]_[-3(6.58e-13)]_25 chrVIII:125891-127712 5.68e-01 100 chrVIII:132832-133352 7.30e-12 38_[+2(4.07e-11)]_35 chrVIII:134088-134633 1.21e-10 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38_[+2(2.55e-12)]_35 chrX:204529-205063 9.51e-06 32_[+1(5.42e-09)]_44 chrX:233703-234262 3.20e-17 22_[+3(2.22e-10)]_[+1(4.61e-10)]_25 chrX:265306-265706 8.80e-01 100 chrX:291181-291390 1.76e-01 100 chrX:354032-354573 2.01e-05 52_[+1(1.46e-07)]_24 chrX:355130-355882 1.33e-05 43_[+1(5.42e-09)]_33 chrX:374192-374788 4.42e-08 28_[+2(4.49e-06)]_14_[-1(3.30e-09)]_\ 7 chrX:378164-378569 3.17e-05 43_[-2(5.16e-09)]_30 chrX:390827-392164 8.69e-02 100 chrX:396556-397007 2.56e-06 38_[+2(5.16e-09)]_35 chrX:414779-415267 2.43e-13 8_[+3(1.76e-11)]_[+1(2.54e-09)]_39 chrX:415797-416266 1.03e-02 28_[+2(2.47e-05)]_45 chrX:422668-423247 8.31e-10 29_[-2(6.55e-08)]_18_[+1(1.85e-07)]_\ 2 chrX:424279-424786 8.76e-05 6_[+2(1.87e-08)]_67 chrX:517644-518074 1.81e-08 7_[-1(2.16e-07)]_17_[+2(5.81e-06)]_\ 25 chrX:523874-524351 8.14e-08 4_[+2(4.07e-11)]_69 chrX:531608-532195 6.58e-08 19_[+1(8.31e-12)]_57 chrX:538338-538826 3.83e-13 37_[+3(9.94e-08)]_[+1(1.70e-09)]_10 chrX:541338-541797 1.33e-05 34_[+1(5.42e-09)]_42 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chrXV:274445-275010 4.04e-05 68_[+1(5.84e-07)]_8 chrXV:281957-282470 1.25e-13 [-2(5.16e-09)]_16_[+1(8.31e-12)]_33 chrXV:287994-288427 5.11e-04 31_[-2(1.45e-06)]_42 chrXV:300865-301432 1.20e-06 72_[+1(1.12e-09)]_4 chrXV:340146-340622 1.67e-04 10_[+2(9.00e-08)]_63 chrXV:353841-354328 1.04e-19 10_[-1(3.47e-08)]_[-3(6.58e-13)]_37 chrXV:391633-392021 1.30e-01 100 chrXV:438456-439031 2.88e-07 17_[+1(9.73e-10)]_59 chrXV:464239-464714 1.36e-05 23_[-2(6.76e-09)]_50 chrXV:487218-487752 1.92e-18 20_[+3(2.32e-13)]_[+1(5.59e-08)]_27 chrXV:505077-505523 5.72e-01 100 chrXV:514418-514701 6.21e-01 100 chrXV:571745-572187 1.06e-02 41_[-2(4.49e-06)]_32 chrXV:594224-594661 8.44e-05 6_[+2(3.37e-08)]_67 chrXV:619653-624376 3.74e-01 100 chrXV:631851-632103 4.00e-01 100 chrXV:639128-639471 4.71e-01 100 chrXV:663480-664137 2.11e-06 57_[-1(9.73e-10)]_19 chrXV:677954-679374 9.87e-01 100 chrXV:710003-710497 1.81e-08 [-2(5.81e-06)]_17_[+1(2.16e-07)]_32 chrXV:779645-780960 8.93e-01 100 chrXV:853995-854611 9.22e-01 100 chrXV:866510-868106 9.67e-01 100 chrXV:881968-882441 5.21e-01 100 chrXV:901386-901673 4.84e-01 100 chrXV:925168-925444 5.41e-01 100 chrXV:968074-968490 5.17e-01 100 chrXV:976202-976668 4.63e-06 35_[-2(6.55e-08)]_38 chrXV:978750-979197 2.50e-01 100 chrXV:980506-981024 1.11e-05 44_[+1(1.12e-09)]_32 chrXV:987079-987456 2.32e-01 100 chrXV:1003956-1004448 5.87e-01 100 chrXV:1025699-1026084 5.01e-01 100 chrXV:1027920-1029274 4.59e-01 100 chrXV:1091091-1091291 9.91e-01 100 chrXVI:55842-56505 4.44e-04 49_[-1(4.22e-08)]_27 chrXVI:75357-76879 7.90e-01 100 chrXVI:135477-135835 6.29e-01 100 chrXVI:172823-174115 9.71e-01 100 chrXVI:188342-188961 4.85e-01 100 chrXVI:209695-210537 8.37e-01 100 chrXVI:279947-280262 8.23e-01 100 chrXVI:280619-282957 4.07e-01 100 chrXVI:302498-303048 8.59e-01 100 chrXVI:338677-339132 1.55e-04 38_[+2(5.81e-06)]_35 chrXVI:340411-340827 1.33e-01 100 chrXVI:378599-379030 1.81e-01 100 chrXVI:404467-405711 9.89e-01 100 chrXVI:406186-407759 7.34e-01 100 chrXVI:435552-436187 3.26e-01 100 chrXVI:520034-520567 5.70e-01 100 chrXVI:559992-560480 4.38e-03 15_[-1(7.55e-07)]_61 chrXVI:572017-572564 1.25e-13 28_[-2(5.16e-09)]_16_[+1(8.31e-12)]_\ 5 chrXVI:575192-575629 9.38e-01 100 chrXVI:581823-582424 4.94e-13 4_[+3(1.76e-11)]_[+1(2.54e-09)]_43 chrXVI:622359-622829 5.72e-06 60_[+2(6.76e-09)]_13 chrXVI:627269-627708 3.31e-01 100 chrXVI:653822-655039 8.85e-01 100 chrXVI:689369-689879 2.21e-11 6_[+3(1.76e-11)]_9_[+1(4.47e-07)]_\ 32 chrXVI:699904-700685 3.79e-01 100 chrXVI:731644-732332 7.30e-01 100 chrXVI:744074-744587 2.86e-10 3_[-2(1.23e-07)]_17_[+1(3.89e-07)]_\ 29 chrXVI:768998-769491 1.33e-08 16_[-1(9.73e-10)]_23_[-3(2.42e-05)]_\ 8 chrXVI:775625-776109 9.30e-01 100 chrXVI:794471-796066 8.55e-01 100 chrXVI:810470-811010 1.61e-13 2_[+3(2.32e-13)]_[+1(5.59e-08)]_45 chrXVI:819168-819826 9.93e-01 100 chrXVI:856745-857143 9.09e-14 7_[-2(2.55e-12)]_18_[+1(5.42e-09)]_\ 24 chrXVI:860162-860672 1.01e-13 11_[-2(5.16e-09)]_16_[+1(8.31e-12)]_\ 22 chrXVI:879908-880560 9.00e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************