******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--NRG1/seqs-sampled ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrII:332302-333892 1.0000 100 chrVIII:48217-48562 1.0000 100 chrXV:0-1025 1.0000 100 chrVI:224908-225324 1.0000 100 chrXI:146891-147260 1.0000 100 chrI:180933-181469 1.0000 100 chrIV:1489019-1490584 1.0000 100 chrXVI:810455-810888 1.0000 100 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1.0000 100 chrXIII:183784-184190 1.0000 100 chrXIV:715923-716627 1.0000 100 chrXI:202828-203273 1.0000 100 chrXIII:861141-861458 1.0000 100 chrXIII:362853-363303 1.0000 100 chrX:265395-265495 1.0000 100 chrXI:83994-84437 1.0000 100 chrX:26260-26360 1.0000 100 chrXIV:546934-547422 1.0000 100 chrXVI:75085-76783 1.0000 100 chrVIII:74660-75939 1.0000 100 chrXV:505084-505512 1.0000 100 chrII:644957-645423 1.0000 100 chrIX:257306-258358 1.0000 100 chrXII:522115-523617 1.0000 100 chrV:434374-434770 1.0000 100 chrXV:353901-354306 1.0000 100 chrIX:68176-69573 1.0000 100 chrXI:614845-615153 1.0000 100 chrV:174627-175078 1.0000 100 chrXII:796312-797379 1.0000 100 chrVII:561389-561942 1.0000 100 chrX:73365-73465 1.0000 100 chrXII:780721-781890 1.0000 100 chrXVI:280555-282968 1.0000 100 chrXV:677922-679205 1.0000 100 chrVII:185508-185990 1.0000 100 chrXIII:752983-754814 1.0000 100 chrXIII:768190-768648 1.0000 100 chrIX:131827-132113 1.0000 100 chrXII:875156-875800 1.0000 100 chrIV:385799-387371 1.0000 100 chrXI:219659-220087 1.0000 100 chrXII:932045-932515 1.0000 100 chrXIV:241373-241768 1.0000 100 chrX:121201-121301 1.0000 100 chrXIV:302294-303696 1.0000 100 chrXVI:645271-646216 1.0000 100 chrXII:366009-366582 1.0000 100 chrVI:204774-205210 1.0000 100 chrXI:7818-8189 1.0000 100 chrIV:1095179-1095688 1.0000 100 chrXII:645812-646281 1.0000 100 chrV:362140-363265 1.0000 100 chrIV:1507028-1507692 1.0000 100 chrXII:975818-976273 1.0000 100 chrVIII:358272-358759 1.0000 100 chrVIII:555820-557222 1.0000 100 chrXVI:828710-829432 1.0000 100 chrXII:214710-215153 1.0000 100 chrXV:424088-424869 1.0000 100 chrV:443073-443494 1.0000 100 chrXV:908454-909135 1.0000 100 chrVII:788292-788773 1.0000 100 chrIV:884150-884654 1.0000 100 chrXI:260431-260935 1.0000 100 chrVIII:293372-293575 1.0000 100 chrII:167728-169657 1.0000 100 chrV:110510-110915 1.0000 100 chrXII:1017707-1019426 1.0000 100 chrVI:63986-65382 1.0000 100 chrVII:401375-401777 1.0000 100 chrVII:845394-845942 1.0000 100 chrM:61843-62082 1.0000 100 chrVII:702851-703654 1.0000 100 chrXIII:923165-924384 1.0000 100 chrVII:609272-610122 1.0000 100 chrV:438492-438963 1.0000 100 chrXIV:426909-427286 1.0000 100 chrX:617702-617802 1.0000 100 chrXI:430784-432346 1.0000 100 chrXVI:40155-40611 1.0000 100 chrVI:180694-181260 1.0000 100 chrIV:538822-539613 1.0000 100 chrXV:925188-925458 1.0000 100 chrXII:903340-903698 1.0000 100 chrXV:1003926-1004930 1.0000 100 chrVII:1004030-1004421 1.0000 100 chrIII:82257-82765 1.0000 100 chrX:545412-545512 1.0000 100 chrIX:381923-382531 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--NRG1/seqs-sampled -oc /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--NRG1/meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 30 -bfile /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--NRG1/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 6 maxw= 30 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.290 C 0.210 G 0.210 T 0.290 Background letter frequencies (from /srv/www/kundaje/amr1/yeastvar/meme_results/results/gm_results/BY4742--NRG1/background): A 0.307 C 0.193 G 0.193 T 0.307 ******************************************************************************** ******************************************************************************** MOTIF HCDMBSGGRDTCGAACCSVKG MEME-1 width = 21 sites = 135 llr = 2035 E-value = 5.4e-381 ******************************************************************************** -------------------------------------------------------------------------------- Motif HCDMBSGGRDTCGAACCSVKG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 3233:12:64:::aa::13:2 pos.-specific C 45:544:::2:8:::a7532: probability G 1242357a42::a::::3458 matrix T 213:2::::2a2::::21:3: bits 2.4 * * 2.1 * * * 1.9 * * * 1.7 * * ** * Relative 1.4 * ****** * Entropy 1.2 * ****** * (21.8 bits) 0.9 ** ******* * 0.7 **** ******** * 0.5 ******* *********** 0.2 ********* *********** 0.0 --------------------- Multilevel CCGCCGGGAATCGAACCCGGG consensus AAAAGCA GT T TGCTA sequence T T T G AC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCDMBSGGRDTCGAACCSVKG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrIII:123381-123836 + 24 5.12e-11 AATGTGGGGC GAGCCGGGACTCGAACCCGGG ACCTCCCGCA chrIV:1016975-1017511 + 19 1.26e-10 AGAAACTCCG AAGCGGGGAGTCGAACCCCGG TCTCCACGGT chrVI:180694-181260 + 52 1.56e-10 AGGACTGCGC AAGCCCGGAATCGAACCGGGG GCCCAACGAT chrVII:845394-845942 - 76 1.56e-10 GCGC AAGCCCGGAATCGAACCGGGG GCCCAACGAT chrXVI:860161-860683 - 52 1.56e-10 AAATCTGCGC AAGCCCGGAATCGAACCGGGG GCCCAACGAT chrXV:281957-282440 - 61 1.56e-10 AGAAATGCGC AAGCCCGGAATCGAACCGGGG GCCCAACGAT chrX:531616-531716 - 5 1.56e-10 GAAACTGCGC AAGCCCGGAATCGAACCGGGG GCCC chrXIII:290589-291145 - 30 1.56e-10 GAAAACTCCG CTACGGGGAGTCGAACCCCGG TCTCCACGGT chrXV:226427-226887 + 9 1.56e-10 ATTTGCGC AAGCCCGGAATCGAACCGGGG GCCCAACGAT chrVII:930759-931234 + 12 1.56e-10 AAAAATGCGC AAGCCCGGAATCGAACCGGGG GCCCAACGAT chrXII:448456-448951 + 2 4.20e-10 C CTACCCGGATTCGAACCGGGG TTGTCCGGAT chrV:250097-250551 - 58 4.20e-10 AAAAAAGGTC CTACCCGGATTCGAACCGGGG TTGTCCGGAT chrVIII:134075-134612 - 74 4.20e-10 AAGGTC CTACCCGGATTCGAACCGGGG TTGTCCGGAT chrIV:802555-803014 + 2 4.20e-10 C CTACCCGGATTCGAACCGGGG TTGTCCGGAT chrXIII:808018-808547 + 19 5.06e-10 AGGGAAGGTC CCACCCGGATTCGAACTGGGG TTGTTCGGAT chrIII:82257-82765 + 6 8.70e-10 CTCCG ATACGGGGAGTCGAACCCCGG TCTCCACGGT chrVII:401375-401777 + 6 8.70e-10 CTCCG ATACGGGGAGTCGAACCCCGG TCTCCACGGT chrII:644957-645423 - 73 8.70e-10 AACTCCG ATACGGGGAGTCGAACCCCGG TCTCCACGGT chrVII:541601-542172 - 60 8.70e-10 GAACACTCCG ATACGGGGAGTCGAACCCCGG TCTCCACGGT chrVII:328369-328961 - 14 8.70e-10 AAAAACTCCG ATACGGGGAGTCGAACCCCGG TCTCCACGGT chrX:115714-115814 + 30 8.70e-10 AAATACTCCG ATACGGGGAGTCGAACCCCGG TCTCCACGGT chrV:176900-177422 - 34 8.70e-10 AAGTACTCCG ATACGGGGAGTCGAACCCCGG TCTCCACGGT chrV:487084-487626 + 31 8.70e-10 GAATACTCCG ATACGGGGAGTCGAACCCCGG TCTCCACGGT chrXII:875156-875800 - 18 2.33e-09 AAGAACTCCT CATAGGGGGCTCGAACCCCTG ACATTTCGGT chrII:350613-351122 - 56 2.33e-09 AAATAAGGTC TTACCCGGATTCGAACCGGGG TTGTCCGGAT chrXVI:768874-769503 + 74 2.33e-09 AAGAACTCCT CATAGGGGGCTCGAACCCCTG ACATTT chrXV:438455-438953 - 59 2.33e-09 AAGAACTCCT CATAGGGGGCTCGAACCCCTG ACATTTCGGT chrXI:578765-579341 - 32 2.33e-09 AAGAACTCCT CATAGGGGGCTCGAACCCCTG ACATTTCGGT chrV:130832-131402 + 20 2.33e-09 AAAATAGGTC TTACCCGGATTCGAACCGGGG TTGTTCGGAT chrV:438492-438963 - 71 4.25e-09 AAATTGATT TCGCCCAGGATCGAACTGGGG ACGTTCTGCG chrXV:663513-664100 + 61 4.25e-09 AAAAACGATT TCGCCCAGGATCGAACTGGGG ACGTTCTGCG chrIV:667741-668263 + 60 4.25e-09 AAAAATGGTC TCTAGCGGGATCGAACCGCTG ATCCCCGCGT chrVII:412101-412575 + 11 4.25e-09 AAACTTGATT TCGCCCAGGATCGAACTGGGG ACGTTCTGCG chrXIII:372202-372750 + 24 4.25e-09 AAAAATGATT TCGCCCAGGATCGAACTGGGG ACGTTCTGCG chrXIV:569666-570147 + 16 4.25e-09 AAGAATGGTC TCTAGCGGGATCGAACCGCTG ATCCCCGCGT chrII:197257-197881 - 23 4.25e-09 AAAAATGGTC TCTAGCGGGATCGAACCGCTG ATCCCCGCGT chrXII:687648-688171 + 5 4.25e-09 GATT TCGCCCAGGATCGAACTGGGG ACGTTCTGCG chrXIII:420254-420877 + 78 4.25e-09 AAAAATGATT TCGCCCAGGATCGAACTGGGG AC chrXIII:586415-586919 + 24 4.25e-09 AAAAATGATT TCGCCCAGGATCGAACTGGGG ACGTTCTGCG chrXVI:880108-880579 + 8 4.25e-09 AATGGTC TCTAGCGGGATCGAACCGCTG ATCCCCGCGT chrV:551064-551563 + 27 4.25e-09 AAAATTGGTC TCTAGCGGGATCGAACCGCTG ATCCCCGCGT chrVIII:85099-85573 + 17 4.25e-09 AAAATTGATT TCGCCCAGGATCGAACTGGGG ACGTTCTGCG chrXI:307905-308441 + 26 4.25e-09 AAAATTGATT TCGCCCAGGATCGAACTGGGG ACGTTCTGCG chrIV:1075285-1075765 + 2 4.91e-09 C CAACCGAGGATCGAACTCGGG ACCTTTGCCG chrX:538351-538451 - 76 5.65e-09 GTTC CGTACGGGACTCGAACCCGCA GTCTTCTCCT chrXII:214710-215153 + 7 6.50e-09 ATGGAC GCAACCGGAATCGAACCGATG ACCTCTTCCT chrI:166041-166583 - 52 6.50e-09 AAATTTGGAC GCAACCGGAATCGAACCGATG ACCTCTTCCT chrX:204520-204620 - 50 7.46e-09 AAAATCTCCG CGACGGGGAATTGAACCCCGA TCTGGCACGC chrXIII:463313-463888 - 50 7.46e-09 AAAATCTCCG CGACGGGGAATTGAACCCCGA TCTGGCACGC chrX:541314-541414 - 46 7.46e-09 AAAATCTCCG CGACGGGGAATTGAACCCCGA TCTGGCACGC chrIX:336110-336639 + 30 7.46e-09 AAAATCTCCG CGACGGGGAATTGAACCCCGA TCTGGCACGC chrXII:426884-427445 - 64 7.46e-09 AAATTCTCCG CGACGGGGAATTGAACCCCGA TCTGGCACGC chrIV:488463-489193 + 24 8.56e-09 GATTCTGATC CAACCGAGGTTCGAACTCGGG ATCTTCGCCG chrXIV:546934-547422 - 43 9.79e-09 ATAACGGGGC GAGCTGGGAATTGAACCCAGG GCCTCTCGCA chrVIII:388670-389218 + 4 9.79e-09 GGC GAGCTGGGAATTGAACCCAGG GCCTCTCGCA chrXIV:567892-568525 - 34 9.79e-09 ATAAAGGGGC GAGCTGGGAATTGAACCCAGG GCCTCTCGCA chrXV:300872-301441 - 67 9.79e-09 AAAAGGGGGC GAGCTGGGAATTGAACCCAGG GCCTCTCGCA chrX:233712-233812 - 38 9.79e-09 ATATTCTTCC CCGCCAGGACTCGAACCTGGA ATCTCCTGGT chrVII:828477-828990 + 45 2.36e-08 AAAAGCACTC ACGATGGGGGTCGAACCCATA ATCTTCTGAT chrII:405642-406209 - 49 2.36e-08 CAAAGCACTC ACGATGGGGGTCGAACCCATA ATCTTCTGAT chrVII:736177-736688 - 4 2.36e-08 AACAACACTC ACGATGGGGGTCGAACCCATA ATC chrXI:162282-162764 + 19 2.36e-08 AAAAACACTC ACGATGGGGGTCGAACCCATA ATCTTCTGAT chrXIII:131639-132093 + 14 2.36e-08 CAAAGCACTC ACGATGGGGGTCGAACCCATA ATCTTCTGAT chrX:374193-374293 + 36 2.36e-08 CAAAGCACTC ACGATGGGGGTCGAACCCATA ATCTTCTGAT chrIV:568673-569248 - 18 2.36e-08 CAAAGCACTC ACGATGGGGGTCGAACCCATA ATCTTCTGAT chrX:355143-355243 - 30 2.36e-08 CAAAGCACTC ACGATGGGGGTCGAACCCATA ATCTTCTGAT chrVII:185508-185990 + 20 4.22e-08 AAGATAGCCC TGTAGGGGGCTCGAACCCCTA ACCTTATGAT chrXI:202828-203273 - 46 4.22e-08 AAGAAAGCCC TGTAGGGGGCTCGAACCCCTA ACCTTATGAT chrXIII:480403-480885 + 32 4.22e-08 AAAGAAGCCC TGTAGGGGGCTCGAACCCCTA ACCTTATGAT chrIV:1201537-1202060 - 49 4.22e-08 TTATTAGCCC TGTAGGGGGCTCGAACCCCTA ACCTTATGAT chrV:135103-135703 + 77 4.22e-08 AAGAAAGCCC TGTAGGGGGCTCGAACCCCTA ACC chrVII:876177-876789 - 8 4.22e-08 AAGAAAGCCC TGTAGGGGGCTCGAACCCCTA ACCTTAT chrIV:1352259-1352750 + 17 4.22e-08 AAGATAGCCC TGTAGGGGGCTCGAACCCCTA ACCTTATGAT chrVII:122070-122652 - 5 4.22e-08 AGAATAGCCC TGTAGGGGGCTCGAACCCCTA ACCT chrX:414754-414854 - 67 4.22e-08 ATATTAGCCC TGTAGGGGGCTCGAACCCCTA ACCTTATGAT chrXI:46533-47013 + 17 4.71e-08 TCAAATGCCC TCTGTGGGAATTGAACCCACG ATCCCCGCAT chrVI:191303-191806 + 14 5.26e-08 AAATGCGTCA CAGACAGGATTCGAACCTGCG CAGGTAAAAC chrIV:619711-620255 + 41 5.87e-08 AAAATCTTCC CCGCCAGGACTTGAACCTGGA ATCTTCTGGT chrV:492188-492575 + 26 5.87e-08 TAATCCTTCC CCGCCAGGACTTGAACCTGGA ATCTTCTGGT chrXI:490700-491382 - 24 5.87e-08 AAATTCTTCC CCGCCAGGACTTGAACCTGGA ATCTTCTGGT chrXII:374190-374651 - 32 5.87e-08 AAAATCTTCC CCGCCAGGACTTGAACCTGGA ATCTTCTGGT chrXIV:104604-105117 - 42 6.53e-08 TAATATGCTT CCAATCGGATTTGAACCGATG ATCTCCACAT chrIX:174796-175377 - 42 6.53e-08 AAAATTGCTT CCAATCGGATTTGAACCGATG ATCTCCACAT chrIX:325513-326096 - 41 6.53e-08 AAAATTGCTT CCAATCGGATTTGAACCGATG ATCTCCACAT chrXV:113564-114118 - 58 6.53e-08 AAAAATGCTT CCAATCGGATTTGAACCGATG ATCTCCACAT chrIV:434013-434538 + 44 6.53e-08 AAATATGCTT CCAATCGGATTTGAACCGATG ATCTCCACAT chrII:266186-266700 - 32 6.53e-08 AAAAATGCTT CCAATCGGATTTGAACCGATG ATCTCCACAT chrVII:561389-561942 + 52 7.26e-08 AATAACGACA ACTGCAGGACTCGAACCTGCG CGGGCAAAGC chrX:523796-523896 + 21 7.26e-08 AATAACGACA ACTGCAGGACTCGAACCTGCG CGGGCAAAGC chrII:226854-227395 - 57 7.26e-08 AATAACGACA ACTGCAGGACTCGAACCTGCG CGGGCAAAGC chrIV:980786-981262 + 5 7.26e-08 GACA ACTGCAGGACTCGAACCTGCG CGGGCAAAGC chrXII:167719-168249 + 15 7.26e-08 AATAACGACA ACTGCAGGACTCGAACCTGCG CGGGCAAAGC chrII:9366-9913 - 52 1.46e-07 AATACTGAAG GATGCGAGGTTCGAACTCGCG CGGACAACCG chrII:347399-347913 - 55 1.46e-07 ATTACTGAAG GATGCGAGGTTCGAACTCGCG CGGACAACCG chrXIV:725951-726415 + 6 1.46e-07 TGAAG GATGCGAGGTTCGAACTCGCG CGGACAACCG chrXIII:837713-838242 - 64 2.13e-07 AAATATCTCC CGGGGGCGAGTCGAACGCCCG ATCTCAAGAT chrIV:946129-946625 - 48 2.13e-07 AAAAATCTCC CGGGGGCGAGTCGAACGCCCG ATCTCAAGAT chrX:354021-354121 - 60 2.13e-07 AAAAATCTCC CGGGGGCGAGTCGAACGCCCG ATCTCAAGAT chrXV:287998-288468 - 72 2.13e-07 ATATCTCC CGGGGGCGAGTCGAACGCCCG ATCTCAAGAT chrX:542757-542857 + 1 2.13e-07 . CGGGGGCGAGTCGAACGCCCG ATCTCAAGAT chrIII:227741-228385 - 4 2.55e-07 TTAAACGACA CCAGCAGGATTTGAACCAGCG CGG chrV:288199-288722 + 38 2.55e-07 AAAAACGACA CCAGCAGGATTTGAACCAGCG CGGGCAGAGC chrXVI:689372-689875 - 48 2.55e-07 TAATACGACA CCAGCAGGATTTGAACCAGCG CGGGCAGAGC chrXVI:338624-339155 + 14 2.79e-07 AAATTTAGCG CCGCTCGGTTTCGATCCGAGG ACATCAGGGT chrXV:710010-710530 - 27 2.79e-07 AAAATTAGCG CCGCTCGGTTTCGATCCGAGG ACATCAGGGT chrX:517645-517745 + 5 2.79e-07 AGCG CCGCTCGGTTTCGATCCGAGG ACATCAGGGT chrXIV:102502-102966 - 80 3.32e-07 . CCAGTGAGGGTTGAACTCACG ATCTTGCGAT chrXIV:632397-632887 - 55 3.32e-07 AAAAACGACC CCAGTGAGGGTTGAACTCACG ATCTTGCGAT chrVII:730940-731429 - 51 3.32e-07 AAAAACGACC CCAGTGAGGGTTGAACTCACG ATCTTGCGAT chrXV:487235-487705 - 67 3.32e-07 ATTAACGACC CCAGTGAGGGTTGAACTCACG ATCTTGCGAT chrXIII:768190-768648 + 5 3.62e-07 GGAC GAGTCCGGAATCGAACCGGAG ACCTCTCCCA chrVII:774096-774674 - 61 3.62e-07 AAATTTGGAC GAGTCCGGAATCGAACCGGAG ACCTCTCCCA chrXIII:320973-321332 + 50 3.62e-07 AAAAATGGAC GAGTCCGGAATCGAACCGGAG ACCTCTCCCA chrXV:976191-976745 - 50 3.62e-07 AATATTGCTC CAGGGGAGGTTCGAACTCTCG ACCTTCAGAT chrX:422678-422778 - 60 3.62e-07 AAATGTGCTC CAGGGGAGGTTCGAACTCTCG ACCTTCAGAT chrXII:656685-657209 + 42 3.62e-07 TTACTTGGAC GAGTCCGGAATCGAACCGGAG ACCTCTCCCA chrXVI:435661-436182 + 27 4.28e-07 AAGAAAGCTC GCACTCAGGATCGAACTAAGG ACCAACAGAT chrVII:706924-707354 + 24 4.28e-07 TAAAAAGCTC GCACTCAGGATCGAACTAAGG ACCAACAGAT chrXIII:378995-379588 + 67 4.65e-07 TAAATTGAAA CGGACAGGAATTGAACCTGCA ACCCTTCGAT chrXVI:55846-56510 + 46 4.65e-07 TTAATTGAAA CGGACAGGAATTGAACCTGCA ACCCTTCGAT chrV:434374-434770 + 24 5.47e-07 GAAAATGCCA TCTCCTAGAATCGAACCAGGG TTTCATCGGC chrXI:313176-313675 + 31 5.47e-07 TAAAATGCCA TCTCCTAGAATCGAACCAGGG TTTCATCGGC chrXIV:374684-375150 - 67 6.94e-07 CAAATTGCGA ACTCTGTGGATCGAACACAGG ACCTCCAGAT chrVIII:466750-467262 - 80 6.94e-07 . CCTGCCAGAATTGAACTAGCG ACCTTTGCAT chrVIII:358272-358759 + 18 1.90e-06 AAATATGCGA ATTCTGTGGATCGAACACAGG ACCTCCAGAT chrXIII:352070-352562 - 79 1.90e-06 A ATTCTGTGGATCGAACACAGG ACCTCCAGAT chrXVI:622324-622850 + 8 1.90e-06 AATGCGA ATTCTGTGGATCGAACACAGG ACCTCCAGAT chrVI:157665-158227 + 25 1.90e-06 ATGAATGCGA ATTCTGTGGATCGAACACAGG ACCTCCAGAT chrXI:458362-459015 - 7 4.52e-06 AAATATGGTT GCTAAGAGATTCGAACTCTTG CATCTT chrVII:422896-423489 - 38 4.52e-06 AATAATGGTT GCTAAGAGATTCGAACTCTTG CATCTTACGA chrV:430981-431567 + 16 4.52e-06 TCTTTCACTG CGGAGAAGTTTCGAACGCCGA AACATGCGCA chrI:180933-181469 - 78 4.52e-06 TT GCTAAGAGATTCGAACTCTTG CATCTTACGA chrXI:379470-379924 + 78 9.61e-06 ACACGCAGAA CGTCCCCAGTTCGATCCTGGG CG chrX:159736-159836 + 66 1.48e-05 ACTAACTTGC GGGCGGGAAATTGATCCCTGA AGTCATGCCC chrXI:355226-356625 - 29 3.49e-05 GCAAATCCGT CTACGCAGTATCTAACTTCGA GTGGGCTGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCDMBSGGRDTCGAACCSVKG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrIII:123381-123836 5.1e-11 23_[+1]_56 chrIV:1016975-1017511 1.3e-10 18_[+1]_61 chrVI:180694-181260 1.6e-10 51_[+1]_28 chrVII:845394-845942 1.6e-10 75_[-1]_4 chrXVI:860161-860683 1.6e-10 51_[-1]_28 chrXV:281957-282440 1.6e-10 60_[-1]_19 chrX:531616-531716 1.6e-10 4_[-1]_75 chrXIII:290589-291145 1.6e-10 29_[-1]_50 chrXV:226427-226887 1.6e-10 8_[+1]_71 chrVII:930759-931234 1.6e-10 11_[+1]_68 chrXII:448456-448951 4.2e-10 1_[+1]_78 chrV:250097-250551 4.2e-10 57_[-1]_22 chrVIII:134075-134612 4.2e-10 73_[-1]_6 chrIV:802555-803014 4.2e-10 1_[+1]_78 chrXIII:808018-808547 5.1e-10 18_[+1]_61 chrIII:82257-82765 8.7e-10 5_[+1]_74 chrVII:401375-401777 8.7e-10 5_[+1]_74 chrII:644957-645423 8.7e-10 72_[-1]_7 chrVII:541601-542172 8.7e-10 59_[-1]_20 chrVII:328369-328961 8.7e-10 13_[-1]_66 chrX:115714-115814 8.7e-10 29_[+1]_50 chrV:176900-177422 8.7e-10 33_[-1]_46 chrV:487084-487626 8.7e-10 30_[+1]_49 chrXII:875156-875800 2.3e-09 17_[-1]_62 chrII:350613-351122 2.3e-09 55_[-1]_24 chrXVI:768874-769503 2.3e-09 73_[+1]_6 chrXV:438455-438953 2.3e-09 58_[-1]_21 chrXI:578765-579341 2.3e-09 31_[-1]_48 chrV:130832-131402 2.3e-09 19_[+1]_60 chrV:438492-438963 4.3e-09 70_[-1]_9 chrXV:663513-664100 4.3e-09 60_[+1]_19 chrIV:667741-668263 4.3e-09 59_[+1]_20 chrVII:412101-412575 4.3e-09 10_[+1]_69 chrXIII:372202-372750 4.3e-09 23_[+1]_56 chrXIV:569666-570147 4.3e-09 15_[+1]_64 chrII:197257-197881 4.3e-09 22_[-1]_57 chrXII:687648-688171 4.3e-09 4_[+1]_75 chrXIII:420254-420877 4.3e-09 77_[+1]_2 chrXIII:586415-586919 4.3e-09 23_[+1]_56 chrXVI:880108-880579 4.3e-09 7_[+1]_72 chrV:551064-551563 4.3e-09 26_[+1]_53 chrVIII:85099-85573 4.3e-09 16_[+1]_63 chrXI:307905-308441 4.3e-09 25_[+1]_54 chrIV:1075285-1075765 4.9e-09 1_[+1]_78 chrX:538351-538451 5.7e-09 75_[-1]_4 chrXII:214710-215153 6.5e-09 6_[+1]_73 chrI:166041-166583 6.5e-09 51_[-1]_28 chrX:204520-204620 7.5e-09 49_[-1]_30 chrXIII:463313-463888 7.5e-09 49_[-1]_30 chrX:541314-541414 7.5e-09 45_[-1]_34 chrIX:336110-336639 7.5e-09 29_[+1]_50 chrXII:426884-427445 7.5e-09 63_[-1]_16 chrIV:488463-489193 8.6e-09 23_[+1]_56 chrXIV:546934-547422 9.8e-09 42_[-1]_37 chrVIII:388670-389218 9.8e-09 3_[+1]_76 chrXIV:567892-568525 9.8e-09 33_[-1]_46 chrXV:300872-301441 9.8e-09 66_[-1]_13 chrX:233712-233812 9.8e-09 37_[-1]_42 chrVII:828477-828990 2.4e-08 44_[+1]_35 chrII:405642-406209 2.4e-08 48_[-1]_31 chrVII:736177-736688 2.4e-08 3_[-1]_76 chrXI:162282-162764 2.4e-08 18_[+1]_61 chrXIII:131639-132093 2.4e-08 13_[+1]_66 chrX:374193-374293 2.4e-08 35_[+1]_44 chrIV:568673-569248 2.4e-08 17_[-1]_62 chrX:355143-355243 2.4e-08 29_[-1]_50 chrVII:185508-185990 4.2e-08 19_[+1]_60 chrXI:202828-203273 4.2e-08 45_[-1]_34 chrXIII:480403-480885 4.2e-08 31_[+1]_48 chrIV:1201537-1202060 4.2e-08 48_[-1]_31 chrV:135103-135703 4.2e-08 76_[+1]_3 chrVII:876177-876789 4.2e-08 7_[-1]_72 chrIV:1352259-1352750 4.2e-08 16_[+1]_63 chrVII:122070-122652 4.2e-08 4_[-1]_75 chrX:414754-414854 4.2e-08 66_[-1]_13 chrXI:46533-47013 4.7e-08 16_[+1]_63 chrVI:191303-191806 5.3e-08 13_[+1]_66 chrIV:619711-620255 5.9e-08 40_[+1]_39 chrV:492188-492575 5.9e-08 25_[+1]_54 chrXI:490700-491382 5.9e-08 23_[-1]_56 chrXII:374190-374651 5.9e-08 31_[-1]_48 chrXIV:104604-105117 6.5e-08 41_[-1]_38 chrIX:174796-175377 6.5e-08 41_[-1]_38 chrIX:325513-326096 6.5e-08 40_[-1]_39 chrXV:113564-114118 6.5e-08 57_[-1]_22 chrIV:434013-434538 6.5e-08 43_[+1]_36 chrII:266186-266700 6.5e-08 31_[-1]_48 chrVII:561389-561942 7.3e-08 51_[+1]_28 chrX:523796-523896 7.3e-08 20_[+1]_59 chrII:226854-227395 7.3e-08 56_[-1]_23 chrIV:980786-981262 7.3e-08 4_[+1]_75 chrXII:167719-168249 7.3e-08 14_[+1]_65 chrII:9366-9913 1.5e-07 51_[-1]_28 chrII:347399-347913 1.5e-07 54_[-1]_25 chrXIV:725951-726415 1.5e-07 5_[+1]_74 chrXIII:837713-838242 2.1e-07 63_[-1]_16 chrIV:946129-946625 2.1e-07 47_[-1]_32 chrX:354021-354121 2.1e-07 59_[-1]_20 chrXV:287998-288468 2.1e-07 71_[-1]_8 chrX:542757-542857 2.1e-07 [+1]_79 chrIII:227741-228385 2.6e-07 3_[-1]_76 chrV:288199-288722 2.6e-07 37_[+1]_42 chrXVI:689372-689875 2.6e-07 47_[-1]_32 chrXVI:338624-339155 2.8e-07 13_[+1]_66 chrXV:710010-710530 2.8e-07 26_[-1]_53 chrX:517645-517745 2.8e-07 4_[+1]_75 chrXIV:102502-102966 3.3e-07 79_[-1] chrXIV:632397-632887 3.3e-07 54_[-1]_25 chrVII:730940-731429 3.3e-07 50_[-1]_29 chrXV:487235-487705 3.3e-07 66_[-1]_13 chrXIII:768190-768648 3.6e-07 4_[+1]_75 chrVII:774096-774674 3.6e-07 60_[-1]_19 chrXIII:320973-321332 3.6e-07 49_[+1]_30 chrXV:976191-976745 3.6e-07 49_[-1]_30 chrX:422678-422778 3.6e-07 59_[-1]_20 chrXII:656685-657209 3.6e-07 41_[+1]_38 chrXVI:435661-436182 4.3e-07 26_[+1]_53 chrVII:706924-707354 4.3e-07 23_[+1]_56 chrXIII:378995-379588 4.6e-07 66_[+1]_13 chrXVI:55846-56510 4.6e-07 45_[+1]_34 chrV:434374-434770 5.5e-07 23_[+1]_56 chrXI:313176-313675 5.5e-07 30_[+1]_49 chrXIV:374684-375150 6.9e-07 66_[-1]_13 chrVIII:466750-467262 6.9e-07 79_[-1] chrVIII:358272-358759 1.9e-06 17_[+1]_62 chrXIII:352070-352562 1.9e-06 78_[-1]_1 chrXVI:622324-622850 1.9e-06 7_[+1]_72 chrVI:157665-158227 1.9e-06 24_[+1]_55 chrXI:458362-459015 4.5e-06 6_[-1]_73 chrVII:422896-423489 4.5e-06 37_[-1]_42 chrV:430981-431567 4.5e-06 15_[+1]_64 chrI:180933-181469 4.5e-06 77_[-1]_2 chrXI:379470-379924 9.6e-06 77_[+1]_2 chrX:159736-159836 1.5e-05 65_[+1]_14 chrXI:355226-356625 3.5e-05 28_[-1]_51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCDMBSGGRDTCGAACCSVKG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF HCDMBSGGRDTCGAACCSVKG width=21 seqs=135 chrIII:123381-123836 ( 24) GAGCCGGGACTCGAACCCGGG 1 chrIV:1016975-1017511 ( 19) AAGCGGGGAGTCGAACCCCGG 1 chrVI:180694-181260 ( 52) AAGCCCGGAATCGAACCGGGG 1 chrVII:845394-845942 ( 76) AAGCCCGGAATCGAACCGGGG 1 chrXVI:860161-860683 ( 52) AAGCCCGGAATCGAACCGGGG 1 chrXV:281957-282440 ( 61) AAGCCCGGAATCGAACCGGGG 1 chrX:531616-531716 ( 5) AAGCCCGGAATCGAACCGGGG 1 chrXIII:290589-291145 ( 30) CTACGGGGAGTCGAACCCCGG 1 chrXV:226427-226887 ( 9) AAGCCCGGAATCGAACCGGGG 1 chrVII:930759-931234 ( 12) AAGCCCGGAATCGAACCGGGG 1 chrXII:448456-448951 ( 2) CTACCCGGATTCGAACCGGGG 1 chrV:250097-250551 ( 58) CTACCCGGATTCGAACCGGGG 1 chrVIII:134075-134612 ( 74) CTACCCGGATTCGAACCGGGG 1 chrIV:802555-803014 ( 2) CTACCCGGATTCGAACCGGGG 1 chrXIII:808018-808547 ( 19) CCACCCGGATTCGAACTGGGG 1 chrIII:82257-82765 ( 6) ATACGGGGAGTCGAACCCCGG 1 chrVII:401375-401777 ( 6) ATACGGGGAGTCGAACCCCGG 1 chrII:644957-645423 ( 73) ATACGGGGAGTCGAACCCCGG 1 chrVII:541601-542172 ( 60) ATACGGGGAGTCGAACCCCGG 1 chrVII:328369-328961 ( 14) ATACGGGGAGTCGAACCCCGG 1 chrX:115714-115814 ( 30) ATACGGGGAGTCGAACCCCGG 1 chrV:176900-177422 ( 34) ATACGGGGAGTCGAACCCCGG 1 chrV:487084-487626 ( 31) ATACGGGGAGTCGAACCCCGG 1 chrXII:875156-875800 ( 18) CATAGGGGGCTCGAACCCCTG 1 chrII:350613-351122 ( 56) TTACCCGGATTCGAACCGGGG 1 chrXVI:768874-769503 ( 74) CATAGGGGGCTCGAACCCCTG 1 chrXV:438455-438953 ( 59) CATAGGGGGCTCGAACCCCTG 1 chrXI:578765-579341 ( 32) CATAGGGGGCTCGAACCCCTG 1 chrV:130832-131402 ( 20) TTACCCGGATTCGAACCGGGG 1 chrV:438492-438963 ( 71) TCGCCCAGGATCGAACTGGGG 1 chrXV:663513-664100 ( 61) TCGCCCAGGATCGAACTGGGG 1 chrIV:667741-668263 ( 60) TCTAGCGGGATCGAACCGCTG 1 chrVII:412101-412575 ( 11) TCGCCCAGGATCGAACTGGGG 1 chrXIII:372202-372750 ( 24) TCGCCCAGGATCGAACTGGGG 1 chrXIV:569666-570147 ( 16) TCTAGCGGGATCGAACCGCTG 1 chrII:197257-197881 ( 23) TCTAGCGGGATCGAACCGCTG 1 chrXII:687648-688171 ( 5) TCGCCCAGGATCGAACTGGGG 1 chrXIII:420254-420877 ( 78) TCGCCCAGGATCGAACTGGGG 1 chrXIII:586415-586919 ( 24) TCGCCCAGGATCGAACTGGGG 1 chrXVI:880108-880579 ( 8) TCTAGCGGGATCGAACCGCTG 1 chrV:551064-551563 ( 27) TCTAGCGGGATCGAACCGCTG 1 chrVIII:85099-85573 ( 17) TCGCCCAGGATCGAACTGGGG 1 chrXI:307905-308441 ( 26) TCGCCCAGGATCGAACTGGGG 1 chrIV:1075285-1075765 ( 2) CAACCGAGGATCGAACTCGGG 1 chrX:538351-538451 ( 76) CGTACGGGACTCGAACCCGCA 1 chrXII:214710-215153 ( 7) GCAACCGGAATCGAACCGATG 1 chrI:166041-166583 ( 52) GCAACCGGAATCGAACCGATG 1 chrX:204520-204620 ( 50) CGACGGGGAATTGAACCCCGA 1 chrXIII:463313-463888 ( 50) CGACGGGGAATTGAACCCCGA 1 chrX:541314-541414 ( 46) CGACGGGGAATTGAACCCCGA 1 chrIX:336110-336639 ( 30) CGACGGGGAATTGAACCCCGA 1 chrXII:426884-427445 ( 64) CGACGGGGAATTGAACCCCGA 1 chrIV:488463-489193 ( 24) CAACCGAGGTTCGAACTCGGG 1 chrXIV:546934-547422 ( 43) GAGCTGGGAATTGAACCCAGG 1 chrVIII:388670-389218 ( 4) GAGCTGGGAATTGAACCCAGG 1 chrXIV:567892-568525 ( 34) GAGCTGGGAATTGAACCCAGG 1 chrXV:300872-301441 ( 67) GAGCTGGGAATTGAACCCAGG 1 chrX:233712-233812 ( 38) CCGCCAGGACTCGAACCTGGA 1 chrVII:828477-828990 ( 45) ACGATGGGGGTCGAACCCATA 1 chrII:405642-406209 ( 49) ACGATGGGGGTCGAACCCATA 1 chrVII:736177-736688 ( 4) ACGATGGGGGTCGAACCCATA 1 chrXI:162282-162764 ( 19) ACGATGGGGGTCGAACCCATA 1 chrXIII:131639-132093 ( 14) ACGATGGGGGTCGAACCCATA 1 chrX:374193-374293 ( 36) ACGATGGGGGTCGAACCCATA 1 chrIV:568673-569248 ( 18) ACGATGGGGGTCGAACCCATA 1 chrX:355143-355243 ( 30) ACGATGGGGGTCGAACCCATA 1 chrVII:185508-185990 ( 20) TGTAGGGGGCTCGAACCCCTA 1 chrXI:202828-203273 ( 46) TGTAGGGGGCTCGAACCCCTA 1 chrXIII:480403-480885 ( 32) TGTAGGGGGCTCGAACCCCTA 1 chrIV:1201537-1202060 ( 49) TGTAGGGGGCTCGAACCCCTA 1 chrV:135103-135703 ( 77) TGTAGGGGGCTCGAACCCCTA 1 chrVII:876177-876789 ( 8) TGTAGGGGGCTCGAACCCCTA 1 chrIV:1352259-1352750 ( 17) TGTAGGGGGCTCGAACCCCTA 1 chrVII:122070-122652 ( 5) TGTAGGGGGCTCGAACCCCTA 1 chrX:414754-414854 ( 67) TGTAGGGGGCTCGAACCCCTA 1 chrXI:46533-47013 ( 17) TCTGTGGGAATTGAACCCACG 1 chrVI:191303-191806 ( 14) CAGACAGGATTCGAACCTGCG 1 chrIV:619711-620255 ( 41) CCGCCAGGACTTGAACCTGGA 1 chrV:492188-492575 ( 26) CCGCCAGGACTTGAACCTGGA 1 chrXI:490700-491382 ( 24) CCGCCAGGACTTGAACCTGGA 1 chrXII:374190-374651 ( 32) CCGCCAGGACTTGAACCTGGA 1 chrXIV:104604-105117 ( 42) CCAATCGGATTTGAACCGATG 1 chrIX:174796-175377 ( 42) CCAATCGGATTTGAACCGATG 1 chrIX:325513-326096 ( 41) CCAATCGGATTTGAACCGATG 1 chrXV:113564-114118 ( 58) CCAATCGGATTTGAACCGATG 1 chrIV:434013-434538 ( 44) CCAATCGGATTTGAACCGATG 1 chrII:266186-266700 ( 32) CCAATCGGATTTGAACCGATG 1 chrVII:561389-561942 ( 52) ACTGCAGGACTCGAACCTGCG 1 chrX:523796-523896 ( 21) ACTGCAGGACTCGAACCTGCG 1 chrII:226854-227395 ( 57) ACTGCAGGACTCGAACCTGCG 1 chrIV:980786-981262 ( 5) ACTGCAGGACTCGAACCTGCG 1 chrXII:167719-168249 ( 15) ACTGCAGGACTCGAACCTGCG 1 chrII:9366-9913 ( 52) GATGCGAGGTTCGAACTCGCG 1 chrII:347399-347913 ( 55) GATGCGAGGTTCGAACTCGCG 1 chrXIV:725951-726415 ( 6) GATGCGAGGTTCGAACTCGCG 1 chrXIII:837713-838242 ( 64) CGGGGGCGAGTCGAACGCCCG 1 chrIV:946129-946625 ( 48) CGGGGGCGAGTCGAACGCCCG 1 chrX:354021-354121 ( 60) CGGGGGCGAGTCGAACGCCCG 1 chrXV:287998-288468 ( 72) CGGGGGCGAGTCGAACGCCCG 1 chrX:542757-542857 ( 1) CGGGGGCGAGTCGAACGCCCG 1 chrIII:227741-228385 ( 4) CCAGCAGGATTTGAACCAGCG 1 chrV:288199-288722 ( 38) CCAGCAGGATTTGAACCAGCG 1 chrXVI:689372-689875 ( 48) CCAGCAGGATTTGAACCAGCG 1 chrXVI:338624-339155 ( 14) CCGCTCGGTTTCGATCCGAGG 1 chrXV:710010-710530 ( 27) CCGCTCGGTTTCGATCCGAGG 1 chrX:517645-517745 ( 5) CCGCTCGGTTTCGATCCGAGG 1 chrXIV:102502-102966 ( 80) CCAGTGAGGGTTGAACTCACG 1 chrXIV:632397-632887 ( 55) CCAGTGAGGGTTGAACTCACG 1 chrVII:730940-731429 ( 51) CCAGTGAGGGTTGAACTCACG 1 chrXV:487235-487705 ( 67) CCAGTGAGGGTTGAACTCACG 1 chrXIII:768190-768648 ( 5) GAGTCCGGAATCGAACCGGAG 1 chrVII:774096-774674 ( 61) GAGTCCGGAATCGAACCGGAG 1 chrXIII:320973-321332 ( 50) GAGTCCGGAATCGAACCGGAG 1 chrXV:976191-976745 ( 50) CAGGGGAGGTTCGAACTCTCG 1 chrX:422678-422778 ( 60) CAGGGGAGGTTCGAACTCTCG 1 chrXII:656685-657209 ( 42) GAGTCCGGAATCGAACCGGAG 1 chrXVI:435661-436182 ( 27) GCACTCAGGATCGAACTAAGG 1 chrVII:706924-707354 ( 24) GCACTCAGGATCGAACTAAGG 1 chrXIII:378995-379588 ( 67) CGGACAGGAATTGAACCTGCA 1 chrXVI:55846-56510 ( 46) CGGACAGGAATTGAACCTGCA 1 chrV:434374-434770 ( 24) TCTCCTAGAATCGAACCAGGG 1 chrXI:313176-313675 ( 31) TCTCCTAGAATCGAACCAGGG 1 chrXIV:374684-375150 ( 67) ACTCTGTGGATCGAACACAGG 1 chrVIII:466750-467262 ( 80) CCTGCCAGAATTGAACTAGCG 1 chrVIII:358272-358759 ( 18) ATTCTGTGGATCGAACACAGG 1 chrXIII:352070-352562 ( 79) ATTCTGTGGATCGAACACAGG 1 chrXVI:622324-622850 ( 8) ATTCTGTGGATCGAACACAGG 1 chrVI:157665-158227 ( 25) ATTCTGTGGATCGAACACAGG 1 chrXI:458362-459015 ( 7) GCTAAGAGATTCGAACTCTTG 1 chrVII:422896-423489 ( 38) GCTAAGAGATTCGAACTCTTG 1 chrV:430981-431567 ( 16) CGGAGAAGTTTCGAACGCCGA 1 chrI:180933-181469 ( 78) GCTAAGAGATTCGAACTCTTG 1 chrXI:379470-379924 ( 78) CGTCCCCAGTTCGATCCTGGG 1 chrX:159736-159836 ( 66) GGGCGGGAAATTGATCCCTGA 1 chrXI:355226-356625 ( 29) CTACGCAGTATCTAACTTCGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCDMBSGGRDTCGAACCSVKG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 10.7119 E= 5.4e-381 -29 103 -38 -57 -52 123 -6 -105 -2 -1372 105 -5 2 132 -12 -337 -379 111 72 -33 -129 88 139 -437 -47 -212 185 -305 -437 -1372 235 -1372 87 -1372 105 -305 33 -6 5 -42 -1372 -1372 -1372 170 -1372 200 -1372 -42 -1372 -1372 236 -537 170 -1372 -1372 -1372 165 -1372 -1372 -305 -1372 237 -1372 -1372 -305 188 -212 -57 -237 141 72 -147 -24 62 105 -279 -337 11 134 -16 -33 -1372 197 -1372 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCDMBSGGRDTCGAACCSVKG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 135 E= 5.4e-381 0.251852 0.392593 0.148148 0.207407 0.214815 0.451852 0.185185 0.148148 0.303704 0.000000 0.400000 0.296296 0.311111 0.481481 0.177778 0.029630 0.022222 0.414815 0.318519 0.244444 0.125926 0.355556 0.503704 0.014815 0.222222 0.044444 0.696296 0.037037 0.014815 0.000000 0.985185 0.000000 0.562963 0.000000 0.400000 0.037037 0.385185 0.185185 0.200000 0.229630 0.000000 0.000000 0.000000 1.000000 0.000000 0.770370 0.000000 0.229630 0.000000 0.000000 0.992593 0.007407 1.000000 0.000000 0.000000 0.000000 0.962963 0.000000 0.000000 0.037037 0.000000 1.000000 0.000000 0.000000 0.037037 0.711111 0.044444 0.207407 0.059259 0.511111 0.318519 0.111111 0.259259 0.296296 0.400000 0.044444 0.029630 0.207407 0.488889 0.274074 0.244444 0.000000 0.755556 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCDMBSGGRDTCGAACCSVKG MEME-1 regular expression -------------------------------------------------------------------------------- [CAT][CA][GAT][CA][CGT][GC][GA]G[AG][ATG]T[CT]GAAC[CT][CG][GCA][GTC][GA] -------------------------------------------------------------------------------- Time 352.21 secs. ******************************************************************************** ******************************************************************************** MOTIF SSCTYWAMCMACTRRRCYAHV MEME-2 width = 21 sites = 133 llr = 1892 E-value = 6.0e-325 ******************************************************************************** -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYAHV MEME-2 Description -------------------------------------------------------------------------------- Simplified A 12111465:39::434::a43 pos.-specific C 53614:15a5:8:22:a7:43 probability G 45:2::2::21::356::::3 matrix T ::36562::::2a1:::3:31 bits 2.4 * 2.1 * * 1.9 * * 1.7 * ** * * Relative 1.4 * *** * * Entropy 1.2 * *** **** (20.5 bits) 0.9 * * ** *** **** 0.7 *** * ** *** ***** 0.5 *** ** ****** ****** 0.2 ********************* 0.0 --------------------- Multilevel CGCTTTACCCACTAGGCCACG consensus GCTGCA A A GAA T AA sequence C TC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYAHV MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chrV:443073-443494 + 17 4.43e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCAAATT chrXIV:569666-570147 + 59 4.43e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCACTGT chrXVI:819290-819795 - 42 4.43e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCATTCT chrXIV:602100-602548 - 43 4.43e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCATTGT chrXVI:880108-880579 + 51 4.43e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCATTAT chrV:551064-551563 + 70 4.43e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCTGTAA chrXII:1051922-1052334 + 41 4.43e-10 TTAGCACGGT GCCTTAACCAACTGGGCCAAG AGACCATGAA chrXII:214710-215153 + 49 8.63e-10 GCAAGGGAAG CGCGCTACCAACTGCGCCATG TGCCCTAAAA chrVI:204774-205210 + 29 8.63e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCGAACG chrXI:219659-220087 - 77 8.63e-10 GAG CGCGCTACCGACTACGCCACA CGCCCTATTT chrXIII:768190-768648 + 47 8.63e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCATTTC chrI:166041-166583 - 10 8.63e-10 GCAAGGGAAG CGCGCTACCAACTGCGCCATG TGCCCAACT chrVII:774096-774674 - 19 8.63e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCAATTA chrX:197169-197269 + 16 8.63e-10 GCTAAGGGAG CGCGCTACCGACTACGCCACA CGCCCTAATA chrXI:517766-518166 - 77 8.63e-10 GAG CGCGCTACCGACTACGCCACA CGCCCATAGT chrX:523796-523896 + 72 1.60e-09 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCTTT chrII:226854-227395 - 6 1.60e-09 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCC chrI:182358-182803 + 48 1.60e-09 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCAAAAT chrVIII:132855-133363 + 23 1.60e-09 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCACTTA chrIV:980786-981262 + 56 1.60e-09 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCTCAAT chrXII:167719-168249 + 66 1.60e-09 TCTAATCTTT CGCCTTAACCACTCGGCCAAG TTGCCATATG chrIV:359367-359853 - 22 1.96e-09 AAAAGCCGAA CGCTCTACCAACTGAGCTAAC AAGGATGAGT chrVII:115259-115782 - 23 1.96e-09 AAAAGCCGAA CGCTCTACCAACTGAGCTAAC AAGGATGAGT chrX:617702-617802 - 23 2.37e-09 TAAATCTGAC GCCTTAAACCACTCGGCCAAA CTCCCATTGT chrXII:731890-732356 - 22 2.37e-09 TAAATCTGAC GCCTTAAACCACTCGGCCAAA CTCCCATTGT chrXI:83994-84437 - 48 3.44e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC CCTCCATACA chrII:347399-347913 - 2 3.44e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC C chrX:424290-424390 + 28 3.44e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC CCTCCATCTT chrIV:519540-519961 - 48 3.44e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC CCTCCGTAAA chrXII:962755-963334 + 36 3.44e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC CCTCCGTCGA chrXIV:725951-726415 + 59 3.44e-09 TAAGTCTGCC GCCTTAGACCACTCGGCCAAC CCTCCAAAGA chrXII:784102-784590 - 63 5.86e-09 TAGCAGGCAT CGCCTTAACCACTCGGCCACT GGGACGGTTG chrIV:1150656-1151191 + 43 5.86e-09 TAGCAGGCAT CGCCTTAACCACTCGGCCACT GGGACTGAAA chrXII:975818-976273 + 36 6.94e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTTTTA chrIII:127512-127923 - 54 6.94e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCATTTT chrXIV:102502-102966 - 37 6.94e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTTATA chrXIV:632397-632887 - 12 6.94e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCACTTT chrVI:137229-137896 + 22 6.94e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCAGTCA chrVII:730940-731429 - 8 6.94e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTT chrXV:487235-487705 - 24 6.94e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCTAACT chrXVI:810455-810888 - 60 6.94e-09 ACAGTCGCAC GCCTTAACCAACTTGGCCATG GAGTCGCAAA chrIV:884150-884654 - 14 1.54e-08 ATAAGCACGA AGCTCTAACCACTGAGCTACA CGAGCATTTT chrXII:605146-605616 + 76 1.54e-08 ATAAGCACGA AGCTCTAACCACTGAGCTACA CGAG chrV:438492-438963 - 28 1.80e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTAATT chrVII:185508-185990 + 62 1.80e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTATTT chrXI:202828-203273 - 4 1.80e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAG chrXIII:480403-480885 + 74 1.80e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCT chrXVI:581812-582326 - 48 1.80e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTCTTT chrVII:412101-412575 + 54 1.80e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCAGTTT chrIV:1201537-1202060 - 7 1.80e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCT chrX:378148-378248 - 50 1.80e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTATTA chrXIII:372202-372750 + 67 1.80e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCAGGTT chrIV:1352259-1352750 + 59 1.80e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTATTT chrVII:823273-823714 - 44 1.80e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCACTCT chrXI:379470-379924 - 38 1.80e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTATTA chrV:435612-436017 + 35 1.80e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTCTTA chrXII:687648-688171 + 48 1.80e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCTATTA chrX:414754-414854 - 25 1.80e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCTAATT chrXIII:586415-586919 + 67 1.80e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCATAGT chrVI:226519-226982 + 35 1.80e-08 AAGAGTCATA CGCGCTACCGATTGCGCCAAC AAGGCATTTT chrVIII:85099-85573 + 60 1.80e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCAAATT chrXI:307905-308441 + 69 1.80e-08 TTAAGCAGAT GCCATAACCGACTAGACCACG AAACCACTTA chrXV:353901-354306 + 35 2.41e-08 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCAGTAA chrXIV:560554-561011 + 8 2.41e-08 AGTGTGG CGCCTTACCAACTTGGCCATA GAAGCCCGTT chrX:58926-59026 + 11 2.41e-08 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTTCTA chrXV:113564-114118 - 16 2.41e-08 ACTAGTGTGG CGCCTTACCAACTTGGCCATA GAAGCTAAAT chrIV:1095179-1095688 + 53 2.77e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAG TCCGCTAACA chrXIV:374684-375150 - 7 2.77e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAG TCCGCT chrVIII:358272-358759 + 79 5.44e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA T chrVIII:237669-238152 + 54 5.44e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTACT chrXIII:352070-352562 - 19 5.44e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTTATA chrXVI:622324-622850 + 69 5.44e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCATATC chrXVI:560015-560512 + 51 5.44e-08 TTCAGTCTGG CGCTCTCCCAACTGAGCTAAA TCCGCTCAAT chrXII:628160-628635 - 41 1.27e-07 TGAATCAGGC GCCTTAGACCGCTCGGCCAAA CAACCACTTA chrXIII:504672-505201 - 14 1.27e-07 TGAATCAGGC GCCTTAGACCGCTCGGCCAAA CAACCACTTA chrXIII:837713-838242 - 6 2.18e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAG chrVI:167245-167690 - 25 2.18e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTCGTT chrX:354021-354121 - 2 2.18e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC G chrXV:287998-288468 - 14 2.18e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGAAGCT chrXIII:168599-169049 - 26 2.18e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTGACT chrX:542757-542857 + 59 2.18e-07 CAGTCTTGCG CCTTAAACCAACTTGGCTACC GAGAGTATTT chrXV:340111-340601 + 40 3.26e-07 CGTAGCCAGA CGCCGTGACCATTGGGCCACG AGGAACAGAT chrV:492188-492575 + 68 3.26e-07 CGTAGCCAGA CGCCGTGACCATTGGGCCACG AGGAATAGGA chrXIII:572742-573147 + 36 3.94e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTACT GAAGCTGTCT chrXV:976191-976745 - 8 3.94e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTACT GAAGCGC chrX:422678-422778 - 18 3.94e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTACT GAAGCATACA chrIV:1175597-1176049 - 61 3.94e-07 ATGAGACTGA CGCTCTTCCTACTGAGCTACT GAAGCTTTGT chrVII:845394-845942 - 36 4.33e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTGTT chrXIII:183784-184190 + 6 4.33e-07 ACGTT GGATTTTACCACTAAACCACT TGCGCGATCT chrIV:992596-993087 - 46 4.33e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTCACA chrXVI:860161-860683 - 12 4.33e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTGTT chrXV:464242-464717 - 26 4.33e-07 CCCAAAGCGA GAATCATACCACTAGACCACA CGCCCTTGTT chrVIII:388670-389218 + 76 4.33e-07 CCCAAAGCGA GAATCATACCACTAGACCACA CGCC chrXV:281957-282440 - 21 4.33e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCGCTTT chrI:138949-139367 - 49 4.33e-07 CCCAAAGCGA GAATCATACCACTAGACCACA CGCCCGTACT chrVI:162006-162429 - 66 4.33e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTGTT chrXV:226427-226887 + 49 4.33e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTGAAT chrVII:930759-931234 + 52 4.33e-07 TGGCAACGTT GGATTTTACCACTAAACCACT TGCGCTTACT chrVI:101162-101595 - 53 4.33e-07 CCCAAAGCGA GAATCATACCACTAGACCACA CGCCCGAATT chrXIII:195924-196400 + 33 4.33e-07 CCCAAAGCGA GAATCATACCACTAGACCACA CGCCCTTGTG chrX:745186-745286 - 28 7.34e-07 CCTCCAATTA CCCATATCCAACTCCACTACC ATTACCCTAC chrXV:594223-594672 + 3 7.34e-07 TA AATTCTAACCACTGAACCACT TGCGCGTTTC chrIV:1256872-1257291 + 23 7.34e-07 GGGAAGCATG AATTCTAACCACTGAACCACT TTCGCTAAGA chrXIII:923165-924384 + 48 1.28e-06 AATGGAACAG GGTATAGACCACTGAGGCAAG TGCCGTGCAT chrXIV:96010-96624 + 20 1.59e-06 GGAAGGGTGG GATGATAACCACTACACTAAC CGCCCATGTG chrXV:571734-572173 - 60 2.25e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGATTTTA chrX:204520-204620 - 9 2.25e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGATTT chrXIII:463313-463888 - 9 2.25e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGACAA chrVII:531419-531814 - 49 2.25e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGAAGTAA chrIX:324156-324605 + 19 2.25e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGAATATT chrIV:568673-569248 - 59 2.25e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGAAGAAA chrX:541314-541414 - 5 2.25e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGG chrIX:336110-336639 + 71 2.25e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGATTTG chrXII:426884-427445 - 23 2.25e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGATAAGA chrX:355143-355243 - 71 2.25e-06 ACAAGCGCC CATTCTGACCATTAAACTATC ACGGAAGAAA chrXI:513166-513642 + 24 2.25e-06 GACAAGCGCC CATTCTGACCATTAAACTATC ACGGAACGTT chrII:350613-351122 - 15 2.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA AAACCCTTTT chrXII:448456-448951 + 43 2.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCGGAAC chrV:250097-250551 - 17 2.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCAGTAC chrIV:644943-645505 + 25 2.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCGTAAC chrVIII:134075-134612 - 33 2.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCGGAAC chrIV:520756-521176 - 61 2.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCCTAAA chrXIII:808018-808547 + 60 2.73e-06 CAGAACCGAA AGTGATAACCACTACACTATA GGACCTTTTT chrV:130832-131402 + 61 2.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA AAACCTCTTA chrIV:802555-803014 + 43 2.73e-06 CAAAACCGAA AGTGATAACCACTACACTATA GGACCGACAA chrXI:0-1072 - 68 3.48e-06 AATTGCACAG GGTATAAACCGCTGAGGCAAG TGCCGTGAAT chrXII:468747-469004 - 35 4.15e-06 ACTCGGTCAG GCTCTTACCAGCTTAACTACA GTTGATCGGA chrIII:1-1726 - 32 4.89e-06 AATGGCACAG GGTATAGACCGCTGAGGCAAG TGCCGTGCAT chrI:229148-230195 + 25 4.89e-06 AATGGGACAG GGTATAGACCGCTGAGGCAAG TGCCGTGTAT chrIV:1524007-1525677 + 66 4.89e-06 AATGGCACAG GGTATAGACCGCTGAGGCAAG TGCCGTGTAT chrIII:123381-123836 + 65 5.74e-06 CCCTAAGCGA GAATCATACCTCTAGACCACA CGCCCTCCTT chrXIV:631674-632134 + 38 5.74e-06 CCCTAAGCGA GAATCATACCTCTAGACCACA CGCCCGGTAG chrXIV:783328-784328 - 46 8.86e-06 CCTCCAATTA CCCATATCCAACCCCACTACC ACTTACCCTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYAHV MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrV:443073-443494 4.4e-10 16_[+2]_63 chrXIV:569666-570147 4.4e-10 58_[+2]_21 chrXVI:819290-819795 4.4e-10 41_[-2]_38 chrXIV:602100-602548 4.4e-10 42_[-2]_37 chrXVI:880108-880579 4.4e-10 50_[+2]_29 chrV:551064-551563 4.4e-10 69_[+2]_10 chrXII:1051922-1052334 4.4e-10 40_[+2]_39 chrXII:214710-215153 8.6e-10 48_[+2]_31 chrVI:204774-205210 8.6e-10 28_[+2]_51 chrXI:219659-220087 8.6e-10 76_[-2]_3 chrXIII:768190-768648 8.6e-10 46_[+2]_33 chrI:166041-166583 8.6e-10 9_[-2]_70 chrVII:774096-774674 8.6e-10 18_[-2]_61 chrX:197169-197269 8.6e-10 15_[+2]_64 chrXI:517766-518166 8.6e-10 76_[-2]_3 chrX:523796-523896 1.6e-09 71_[+2]_8 chrII:226854-227395 1.6e-09 5_[-2]_74 chrI:182358-182803 1.6e-09 47_[+2]_32 chrVIII:132855-133363 1.6e-09 22_[+2]_57 chrIV:980786-981262 1.6e-09 55_[+2]_24 chrXII:167719-168249 1.6e-09 65_[+2]_14 chrIV:359367-359853 2e-09 21_[-2]_58 chrVII:115259-115782 2e-09 22_[-2]_57 chrX:617702-617802 2.4e-09 22_[-2]_57 chrXII:731890-732356 2.4e-09 21_[-2]_58 chrXI:83994-84437 3.4e-09 47_[-2]_32 chrII:347399-347913 3.4e-09 1_[-2]_78 chrX:424290-424390 3.4e-09 27_[+2]_52 chrIV:519540-519961 3.4e-09 47_[-2]_32 chrXII:962755-963334 3.4e-09 35_[+2]_44 chrXIV:725951-726415 3.4e-09 58_[+2]_21 chrXII:784102-784590 5.9e-09 62_[-2]_17 chrIV:1150656-1151191 5.9e-09 42_[+2]_37 chrXII:975818-976273 6.9e-09 35_[+2]_44 chrIII:127512-127923 6.9e-09 53_[-2]_26 chrXIV:102502-102966 6.9e-09 36_[-2]_43 chrXIV:632397-632887 6.9e-09 11_[-2]_68 chrVI:137229-137896 6.9e-09 21_[+2]_58 chrVII:730940-731429 6.9e-09 7_[-2]_72 chrXV:487235-487705 6.9e-09 23_[-2]_56 chrXVI:810455-810888 6.9e-09 59_[-2]_20 chrIV:884150-884654 1.5e-08 13_[-2]_66 chrXII:605146-605616 1.5e-08 75_[+2]_4 chrV:438492-438963 1.8e-08 27_[-2]_52 chrVII:185508-185990 1.8e-08 61_[+2]_18 chrXI:202828-203273 1.8e-08 3_[-2]_76 chrXIII:480403-480885 1.8e-08 73_[+2]_6 chrXVI:581812-582326 1.8e-08 47_[-2]_32 chrVII:412101-412575 1.8e-08 53_[+2]_26 chrIV:1201537-1202060 1.8e-08 6_[-2]_73 chrX:378148-378248 1.8e-08 49_[-2]_30 chrXIII:372202-372750 1.8e-08 66_[+2]_13 chrIV:1352259-1352750 1.8e-08 58_[+2]_21 chrVII:823273-823714 1.8e-08 43_[-2]_36 chrXI:379470-379924 1.8e-08 37_[-2]_42 chrV:435612-436017 1.8e-08 34_[+2]_45 chrXII:687648-688171 1.8e-08 47_[+2]_32 chrX:414754-414854 1.8e-08 24_[-2]_55 chrXIII:586415-586919 1.8e-08 66_[+2]_13 chrVI:226519-226982 1.8e-08 34_[+2]_45 chrVIII:85099-85573 1.8e-08 59_[+2]_20 chrXI:307905-308441 1.8e-08 68_[+2]_11 chrXV:353901-354306 2.4e-08 34_[+2]_45 chrXIV:560554-561011 2.4e-08 7_[+2]_72 chrX:58926-59026 2.4e-08 10_[+2]_69 chrXV:113564-114118 2.4e-08 15_[-2]_64 chrIV:1095179-1095688 2.8e-08 52_[+2]_27 chrXIV:374684-375150 2.8e-08 6_[-2]_73 chrVIII:358272-358759 5.4e-08 78_[+2]_1 chrVIII:237669-238152 5.4e-08 53_[+2]_26 chrXIII:352070-352562 5.4e-08 18_[-2]_61 chrXVI:622324-622850 5.4e-08 68_[+2]_11 chrXVI:560015-560512 5.4e-08 50_[+2]_29 chrXII:628160-628635 1.3e-07 40_[-2]_39 chrXIII:504672-505201 1.3e-07 13_[-2]_66 chrXIII:837713-838242 2.2e-07 5_[-2]_74 chrVI:167245-167690 2.2e-07 24_[-2]_55 chrX:354021-354121 2.2e-07 1_[-2]_78 chrXV:287998-288468 2.2e-07 13_[-2]_66 chrXIII:168599-169049 2.2e-07 25_[-2]_54 chrX:542757-542857 2.2e-07 58_[+2]_21 chrXV:340111-340601 3.3e-07 39_[+2]_40 chrV:492188-492575 3.3e-07 67_[+2]_12 chrXIII:572742-573147 3.9e-07 35_[+2]_44 chrXV:976191-976745 3.9e-07 7_[-2]_72 chrX:422678-422778 3.9e-07 17_[-2]_62 chrIV:1175597-1176049 3.9e-07 60_[-2]_19 chrVII:845394-845942 4.3e-07 35_[-2]_44 chrXIII:183784-184190 4.3e-07 5_[+2]_74 chrIV:992596-993087 4.3e-07 45_[-2]_34 chrXVI:860161-860683 4.3e-07 11_[-2]_68 chrXV:464242-464717 4.3e-07 25_[-2]_54 chrVIII:388670-389218 4.3e-07 75_[+2]_4 chrXV:281957-282440 4.3e-07 20_[-2]_59 chrI:138949-139367 4.3e-07 48_[-2]_31 chrVI:162006-162429 4.3e-07 65_[-2]_14 chrXV:226427-226887 4.3e-07 48_[+2]_31 chrVII:930759-931234 4.3e-07 51_[+2]_28 chrVI:101162-101595 4.3e-07 52_[-2]_27 chrXIII:195924-196400 4.3e-07 32_[+2]_47 chrX:745186-745286 7.3e-07 27_[-2]_52 chrXV:594223-594672 7.3e-07 2_[+2]_77 chrIV:1256872-1257291 7.3e-07 22_[+2]_57 chrXIII:923165-924384 1.3e-06 47_[+2]_32 chrXIV:96010-96624 1.6e-06 19_[+2]_60 chrXV:571734-572173 2.2e-06 59_[-2]_20 chrX:204520-204620 2.2e-06 8_[-2]_71 chrXIII:463313-463888 2.2e-06 8_[-2]_71 chrVII:531419-531814 2.2e-06 48_[-2]_31 chrIX:324156-324605 2.2e-06 18_[+2]_61 chrIV:568673-569248 2.2e-06 58_[-2]_21 chrX:541314-541414 2.2e-06 4_[-2]_75 chrIX:336110-336639 2.2e-06 70_[+2]_9 chrXII:426884-427445 2.2e-06 22_[-2]_57 chrX:355143-355243 2.2e-06 70_[-2]_9 chrXI:513166-513642 2.2e-06 23_[+2]_56 chrII:350613-351122 2.7e-06 14_[-2]_65 chrXII:448456-448951 2.7e-06 42_[+2]_37 chrV:250097-250551 2.7e-06 16_[-2]_63 chrIV:644943-645505 2.7e-06 24_[+2]_55 chrVIII:134075-134612 2.7e-06 32_[-2]_47 chrIV:520756-521176 2.7e-06 60_[-2]_19 chrXIII:808018-808547 2.7e-06 59_[+2]_20 chrV:130832-131402 2.7e-06 60_[+2]_19 chrIV:802555-803014 2.7e-06 42_[+2]_37 chrXI:0-1072 3.5e-06 67_[-2]_12 chrXII:468747-469004 4.1e-06 34_[-2]_45 chrIII:1-1726 4.9e-06 31_[-2]_48 chrI:229148-230195 4.9e-06 24_[+2]_55 chrIV:1524007-1525677 4.9e-06 65_[+2]_14 chrIII:123381-123836 5.7e-06 64_[+2]_15 chrXIV:631674-632134 5.7e-06 37_[+2]_42 chrXIV:783328-784328 8.9e-06 45_[-2]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYAHV MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SSCTYWAMCMACTRRRCYAHV width=21 seqs=133 chrV:443073-443494 ( 17) GCCTTAACCAACTGGGCCAAG 1 chrXIV:569666-570147 ( 59) GCCTTAACCAACTGGGCCAAG 1 chrXVI:819290-819795 ( 42) GCCTTAACCAACTGGGCCAAG 1 chrXIV:602100-602548 ( 43) GCCTTAACCAACTGGGCCAAG 1 chrXVI:880108-880579 ( 51) GCCTTAACCAACTGGGCCAAG 1 chrV:551064-551563 ( 70) GCCTTAACCAACTGGGCCAAG 1 chrXII:1051922-1052334 ( 41) GCCTTAACCAACTGGGCCAAG 1 chrXII:214710-215153 ( 49) CGCGCTACCAACTGCGCCATG 1 chrVI:204774-205210 ( 29) CGCGCTACCGACTACGCCACA 1 chrXI:219659-220087 ( 77) CGCGCTACCGACTACGCCACA 1 chrXIII:768190-768648 ( 47) CGCGCTACCGACTACGCCACA 1 chrI:166041-166583 ( 10) CGCGCTACCAACTGCGCCATG 1 chrVII:774096-774674 ( 19) CGCGCTACCGACTACGCCACA 1 chrX:197169-197269 ( 16) CGCGCTACCGACTACGCCACA 1 chrXI:517766-518166 ( 77) CGCGCTACCGACTACGCCACA 1 chrX:523796-523896 ( 72) CGCCTTAACCACTCGGCCAAG 1 chrII:226854-227395 ( 6) CGCCTTAACCACTCGGCCAAG 1 chrI:182358-182803 ( 48) CGCCTTAACCACTCGGCCAAG 1 chrVIII:132855-133363 ( 23) CGCCTTAACCACTCGGCCAAG 1 chrIV:980786-981262 ( 56) CGCCTTAACCACTCGGCCAAG 1 chrXII:167719-168249 ( 66) CGCCTTAACCACTCGGCCAAG 1 chrIV:359367-359853 ( 22) CGCTCTACCAACTGAGCTAAC 1 chrVII:115259-115782 ( 23) CGCTCTACCAACTGAGCTAAC 1 chrX:617702-617802 ( 23) GCCTTAAACCACTCGGCCAAA 1 chrXII:731890-732356 ( 22) GCCTTAAACCACTCGGCCAAA 1 chrXI:83994-84437 ( 48) GCCTTAGACCACTCGGCCAAC 1 chrII:347399-347913 ( 2) GCCTTAGACCACTCGGCCAAC 1 chrX:424290-424390 ( 28) GCCTTAGACCACTCGGCCAAC 1 chrIV:519540-519961 ( 48) GCCTTAGACCACTCGGCCAAC 1 chrXII:962755-963334 ( 36) GCCTTAGACCACTCGGCCAAC 1 chrXIV:725951-726415 ( 59) GCCTTAGACCACTCGGCCAAC 1 chrXII:784102-784590 ( 63) CGCCTTAACCACTCGGCCACT 1 chrIV:1150656-1151191 ( 43) CGCCTTAACCACTCGGCCACT 1 chrXII:975818-976273 ( 36) GCCTTAACCAACTTGGCCATG 1 chrIII:127512-127923 ( 54) GCCTTAACCAACTTGGCCATG 1 chrXIV:102502-102966 ( 37) GCCTTAACCAACTTGGCCATG 1 chrXIV:632397-632887 ( 12) GCCTTAACCAACTTGGCCATG 1 chrVI:137229-137896 ( 22) GCCTTAACCAACTTGGCCATG 1 chrVII:730940-731429 ( 8) GCCTTAACCAACTTGGCCATG 1 chrXV:487235-487705 ( 24) GCCTTAACCAACTTGGCCATG 1 chrXVI:810455-810888 ( 60) GCCTTAACCAACTTGGCCATG 1 chrIV:884150-884654 ( 14) AGCTCTAACCACTGAGCTACA 1 chrXII:605146-605616 ( 76) AGCTCTAACCACTGAGCTACA 1 chrV:438492-438963 ( 28) GCCATAACCGACTAGACCACG 1 chrVII:185508-185990 ( 62) CGCGCTACCGATTGCGCCAAC 1 chrXI:202828-203273 ( 4) CGCGCTACCGATTGCGCCAAC 1 chrXIII:480403-480885 ( 74) CGCGCTACCGATTGCGCCAAC 1 chrXVI:581812-582326 ( 48) CGCGCTACCGATTGCGCCAAC 1 chrVII:412101-412575 ( 54) GCCATAACCGACTAGACCACG 1 chrIV:1201537-1202060 ( 7) CGCGCTACCGATTGCGCCAAC 1 chrX:378148-378248 ( 50) GCCATAACCGACTAGACCACG 1 chrXIII:372202-372750 ( 67) GCCATAACCGACTAGACCACG 1 chrIV:1352259-1352750 ( 59) CGCGCTACCGATTGCGCCAAC 1 chrVII:823273-823714 ( 44) GCCATAACCGACTAGACCACG 1 chrXI:379470-379924 ( 38) GCCATAACCGACTAGACCACG 1 chrV:435612-436017 ( 35) CGCGCTACCGATTGCGCCAAC 1 chrXII:687648-688171 ( 48) GCCATAACCGACTAGACCACG 1 chrX:414754-414854 ( 25) CGCGCTACCGATTGCGCCAAC 1 chrXIII:586415-586919 ( 67) GCCATAACCGACTAGACCACG 1 chrVI:226519-226982 ( 35) CGCGCTACCGATTGCGCCAAC 1 chrVIII:85099-85573 ( 60) GCCATAACCGACTAGACCACG 1 chrXI:307905-308441 ( 69) GCCATAACCGACTAGACCACG 1 chrXV:353901-354306 ( 35) CGCCTTACCAACTTGGCCATA 1 chrXIV:560554-561011 ( 8) CGCCTTACCAACTTGGCCATA 1 chrX:58926-59026 ( 11) CGCCTTACCAACTTGGCCATA 1 chrXV:113564-114118 ( 16) CGCCTTACCAACTTGGCCATA 1 chrIV:1095179-1095688 ( 53) CGCTCTCCCAACTGAGCTAAG 1 chrXIV:374684-375150 ( 7) CGCTCTCCCAACTGAGCTAAG 1 chrVIII:358272-358759 ( 79) CGCTCTCCCAACTGAGCTAAA 1 chrVIII:237669-238152 ( 54) CGCTCTCCCAACTGAGCTAAA 1 chrXIII:352070-352562 ( 19) CGCTCTCCCAACTGAGCTAAA 1 chrXVI:622324-622850 ( 69) CGCTCTCCCAACTGAGCTAAA 1 chrXVI:560015-560512 ( 51) CGCTCTCCCAACTGAGCTAAA 1 chrXII:628160-628635 ( 41) GCCTTAGACCGCTCGGCCAAA 1 chrXIII:504672-505201 ( 14) GCCTTAGACCGCTCGGCCAAA 1 chrXIII:837713-838242 ( 6) CCTTAAACCAACTTGGCTACC 1 chrVI:167245-167690 ( 25) CCTTAAACCAACTTGGCTACC 1 chrX:354021-354121 ( 2) CCTTAAACCAACTTGGCTACC 1 chrXV:287998-288468 ( 14) CCTTAAACCAACTTGGCTACC 1 chrXIII:168599-169049 ( 26) CCTTAAACCAACTTGGCTACC 1 chrX:542757-542857 ( 59) CCTTAAACCAACTTGGCTACC 1 chrXV:340111-340601 ( 40) CGCCGTGACCATTGGGCCACG 1 chrV:492188-492575 ( 68) CGCCGTGACCATTGGGCCACG 1 chrXIII:572742-573147 ( 36) CGCTCTTCCTACTGAGCTACT 1 chrXV:976191-976745 ( 8) CGCTCTTCCTACTGAGCTACT 1 chrX:422678-422778 ( 18) CGCTCTTCCTACTGAGCTACT 1 chrIV:1175597-1176049 ( 61) CGCTCTTCCTACTGAGCTACT 1 chrVII:845394-845942 ( 36) GGATTTTACCACTAAACCACT 1 chrXIII:183784-184190 ( 6) GGATTTTACCACTAAACCACT 1 chrIV:992596-993087 ( 46) GGATTTTACCACTAAACCACT 1 chrXVI:860161-860683 ( 12) GGATTTTACCACTAAACCACT 1 chrXV:464242-464717 ( 26) GAATCATACCACTAGACCACA 1 chrVIII:388670-389218 ( 76) GAATCATACCACTAGACCACA 1 chrXV:281957-282440 ( 21) GGATTTTACCACTAAACCACT 1 chrI:138949-139367 ( 49) GAATCATACCACTAGACCACA 1 chrVI:162006-162429 ( 66) GGATTTTACCACTAAACCACT 1 chrXV:226427-226887 ( 49) GGATTTTACCACTAAACCACT 1 chrVII:930759-931234 ( 52) GGATTTTACCACTAAACCACT 1 chrVI:101162-101595 ( 53) GAATCATACCACTAGACCACA 1 chrXIII:195924-196400 ( 33) GAATCATACCACTAGACCACA 1 chrX:745186-745286 ( 28) CCCATATCCAACTCCACTACC 1 chrXV:594223-594672 ( 3) AATTCTAACCACTGAACCACT 1 chrIV:1256872-1257291 ( 23) AATTCTAACCACTGAACCACT 1 chrXIII:923165-924384 ( 48) GGTATAGACCACTGAGGCAAG 1 chrXIV:96010-96624 ( 20) GATGATAACCACTACACTAAC 1 chrXV:571734-572173 ( 60) CATTCTGACCATTAAACTATC 1 chrX:204520-204620 ( 9) CATTCTGACCATTAAACTATC 1 chrXIII:463313-463888 ( 9) CATTCTGACCATTAAACTATC 1 chrVII:531419-531814 ( 49) CATTCTGACCATTAAACTATC 1 chrIX:324156-324605 ( 19) CATTCTGACCATTAAACTATC 1 chrIV:568673-569248 ( 59) CATTCTGACCATTAAACTATC 1 chrX:541314-541414 ( 5) CATTCTGACCATTAAACTATC 1 chrIX:336110-336639 ( 71) CATTCTGACCATTAAACTATC 1 chrXII:426884-427445 ( 23) CATTCTGACCATTAAACTATC 1 chrX:355143-355243 ( 71) CATTCTGACCATTAAACTATC 1 chrXI:513166-513642 ( 24) CATTCTGACCATTAAACTATC 1 chrII:350613-351122 ( 15) AGTGATAACCACTACACTATA 1 chrXII:448456-448951 ( 43) AGTGATAACCACTACACTATA 1 chrV:250097-250551 ( 17) AGTGATAACCACTACACTATA 1 chrIV:644943-645505 ( 25) AGTGATAACCACTACACTATA 1 chrVIII:134075-134612 ( 33) AGTGATAACCACTACACTATA 1 chrIV:520756-521176 ( 61) AGTGATAACCACTACACTATA 1 chrXIII:808018-808547 ( 60) AGTGATAACCACTACACTATA 1 chrV:130832-131402 ( 61) AGTGATAACCACTACACTATA 1 chrIV:802555-803014 ( 43) AGTGATAACCACTACACTATA 1 chrXI:0-1072 ( 68) GGTATAAACCGCTGAGGCAAG 1 chrXII:468747-469004 ( 35) GCTCTTACCAGCTTAACTACA 1 chrIII:1-1726 ( 32) GGTATAGACCGCTGAGGCAAG 1 chrI:229148-230195 ( 25) GGTATAGACCGCTGAGGCAAG 1 chrIV:1524007-1525677 ( 66) GGTATAGACCGCTGAGGCAAG 1 chrIII:123381-123836 ( 65) GAATCATACCTCTAGACCACA 1 chrXIV:631674-632134 ( 38) GAATCATACCTCTAGACCACA 1 chrXIV:783328-784328 ( 46) CCCATATCCAACCCCACTACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYAHV MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 9.8432 E= 6.0e-325 -165 130 115 -1370 -96 78 141 -1370 -145 169 -1370 -22 -126 -77 7 86 -135 102 -368 62 43 -1370 -1370 93 97 -187 -4 -96 67 141 -1370 -1370 -1370 237 -1370 -1370 -7 134 -4 -335 160 -1370 -187 -435 -1370 211 -1370 -89 -1370 -468 -1370 169 35 -36 71 -110 4 18 127 -1370 32 -1370 168 -1370 -1370 232 -236 -1370 -1370 178 -1370 14 170 -1370 -1370 -1370 20 102 -1370 -27 -10 53 71 -135 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYAHV MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 133 E= 6.0e-325 0.097744 0.473684 0.428571 0.000000 0.157895 0.330827 0.511278 0.000000 0.112782 0.624060 0.000000 0.263158 0.127820 0.112782 0.203008 0.556391 0.120301 0.390977 0.015038 0.473684 0.413534 0.000000 0.000000 0.586466 0.601504 0.052632 0.187970 0.157895 0.488722 0.511278 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.293233 0.488722 0.187970 0.030075 0.932331 0.000000 0.052632 0.015038 0.000000 0.834586 0.000000 0.165414 0.000000 0.007519 0.000000 0.992481 0.390977 0.150376 0.315789 0.142857 0.315789 0.218045 0.466165 0.000000 0.383459 0.000000 0.616541 0.000000 0.000000 0.962406 0.037594 0.000000 0.000000 0.661654 0.000000 0.338346 1.000000 0.000000 0.000000 0.000000 0.353383 0.390977 0.000000 0.255639 0.285714 0.278195 0.315789 0.120301 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SSCTYWAMCMACTRRRCYAHV MEME-2 regular expression -------------------------------------------------------------------------------- [CG][GC][CT][TG][TC][TA]A[CA]C[CA]ACT[AG][GAC][GA]C[CT]A[CAT][GAC] -------------------------------------------------------------------------------- Time 666.66 secs. ******************************************************************************** ******************************************************************************** MOTIF AYCTYCDSATTASHAGTSMGACGCBTTDCC MEME-3 width = 30 sites = 38 llr = 768 E-value = 1.0e-119 ******************************************************************************** -------------------------------------------------------------------------------- Motif AYCTYCDSATTASHAGTSMGACGCBTTDCC MEME-3 Description -------------------------------------------------------------------------------- Simplified A 7::11:4:7:28:37:2132722::::32: pos.-specific C 26a:48:5:1:16212155:18:8312:69 probability G ::::2:252:::41:8:4:72:8:32:3:: matrix T :4:9324:1982:42:7:2:1::2478321 bits 2.4 * 2.1 * 1.9 * 1.7 * * Relative 1.4 * * * *** * Entropy 1.2 *** * * * * * * *** * * (29.1 bits) 0.9 **** * * ** * * * * *** * * 0.7 **** * * **** * *** *** ** ** 0.5 **** * ****** ************* ** 0.2 ****************************** 0.0 ------------------------------ Multilevel ACCTCCAGATTACTAGTCCGACGCTTTACC consensus CT TTTC GAT AGAAGAATC TA sequence G C G G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYCTYCDSATTASHAGTSMGACGCBTTDCC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chrVII:828477-828990 + 66 3.26e-14 CGAACCCATA ATCTTCTGATTAGAAGTCAGACGCGTTGCC ATTAC chrII:405642-406209 - 19 3.26e-14 CGAACCCATA ATCTTCTGATTAGAAGTCAGACGCGTTGCC ATTACGCCAC chrXI:162282-162764 + 40 3.26e-14 CGAACCCATA ATCTTCTGATTAGAAGTCAGACGCGTTGCC ATTACGCCAC chrXIII:131639-132093 + 35 3.26e-14 CGAACCCATA ATCTTCTGATTAGAAGTCAGACGCGTTGCC ATTACGCCAC chrX:374193-374293 + 57 3.26e-14 CGAACCCATA ATCTTCTGATTAGAAGTCAGACGCGTTGCC ATTACGCCAC chrXIII:747769-748149 + 9 3.26e-14 AACCCATA ATCTTCTGATTAGAAGTCAGACGCGTTGCC ATTACGCCAC chrXIV:104604-105117 - 12 5.65e-14 TGAACCGATG ATCTCCACATTACTAGTGTGGCGCCTTACC AACTTGGCCA chrIX:174796-175377 - 12 5.65e-14 TGAACCGATG ATCTCCACATTACTAGTGTGGCGCCTTACC AACTTGGCCA chrIX:325513-326096 - 11 5.65e-14 TGAACCGATG ATCTCCACATTACTAGTGTGGCGCCTTACC AACTTGGCCA chrIV:434013-434538 + 65 5.65e-14 TGAACCGATG ATCTCCACATTACTAGTGTGGCGCCTTACC AACTTG chrII:266186-266700 - 2 5.65e-14 TGAACCGATG ATCTCCACATTACTAGTGTGGCGCCTTACC A chrVII:1004030-1004421 - 57 6.28e-12 TGAACTAACG ACCTTTGCATTACAAGTGCAACGCTCTACC ACTAAGCTAA chrVIII:466750-467262 - 50 6.28e-12 TGAACTAGCG ACCTTTGCATTACAAGTGCAACGCTCTACC ACTAAGCTAA chrXVI:744000-744570 - 65 6.28e-12 CTAACG ACCTTTGCATTACAAGTGCAACGCTCTACC ACTAAGCTAA chrVII:661529-661993 - 54 6.28e-12 TGAACTAACG ACCTTTGCATTACAAGTGCAACGCTCTACC ACTAAGCTAA chrVIII:358272-358759 + 39 1.29e-10 CGAACACAGG ACCTCCAGATAACTTGACCGAAGTTTTTTC TTCAGTCTGG chrVIII:237669-238152 + 14 1.29e-10 CGAACACAGG ACCTCCAGATAACTTGACCGAAGTTTTTTC TTCAGTCTGG chrXVI:622324-622850 + 29 1.29e-10 CGAACACAGG ACCTCCAGATAACTTGACCGAAGTTTTTTC TTCAGTCTGG chrXVI:560015-560512 + 11 1.29e-10 CGAACACAGG ACCTCCAGATAACTTGACCGAAGTTTTTTC TTCAGTCTGG chrVI:157665-158227 + 46 1.29e-10 CGAACACAGG ACCTCCAGATAACTTGACCGAAGTTTTTTC TTCAGTCTGG chrX:233712-233812 - 8 1.75e-10 CGAACCTGGA ATCTCCTGGTTCGTAGCCAGACGCCGTGAC CATTGGG chrIV:619711-620255 + 62 3.19e-10 TGAACCTGGA ATCTTCTGGTTCGTAGCCAGACGCCGTGAC CATTGGGCC chrXI:46533-47013 + 38 3.19e-10 TGAACCCACG ATCCCCGCATTACGAGTGCGATGCCTTACC ACTTGGCCAA chrXII:374190-374651 - 2 3.19e-10 TGAACCTGGA ATCTTCTGGTTCGTAGCCAGACGCCGTGAC C chrXIV:374684-375150 - 37 9.71e-10 CGAACACAGG ACCTCCAGATGACTTGACCGAAGTTTTTCT TCAGTCTGGC chrIV:1095179-1095688 + 13 2.48e-09 CGAACACAGG ACCTCCAGATATCTTGACCAAAGTTTTTTC TTCAGTCTGG chrXIII:352070-352562 - 49 2.92e-09 CGAACACAGG ACCTCCAGATAACTTGACCGAAGTATTTCT TCAGTCTGGC chrV:288199-288722 + 68 3.70e-09 GCGGGCAGAG CCCAACAGATTTCAAGTCTGTCGCCTTAAC CAC chrXVI:689372-689875 - 9 3.70e-09 GCGGGCAGAG CCCAACAGATTTCAAGTCTGTCGCCTTAAC CACTCGGC chrX:538351-538451 - 46 9.17e-09 CGAACCCGCA GTCTTCTCCTTAGGAGGGAGACGCGTTACC ATTACGCCAA chrXVI:338624-339155 + 51 3.76e-08 GGGTTATGAG CCCTGCGCGCTTCCACTGCGCCACGGCGCT GCTAAATCAT chrV:99891-100345 - 65 3.76e-08 TATGAG CCCTGCGCGCTTCCACTGCGCCACGGCGCT TAGCCAACTT chrX:517645-517745 + 42 3.76e-08 GGGTTATGAG CCCTGCGCGCTTCCACTGCGCCACGGCGCT TAACTTTTAT chrVIII:21-298 + 9 6.88e-08 AAATGAAA CCCTGTTCTTTAGCCCTACAACACTTCTAC ATAGCCCTAA chrXV:1091104-1091291 - 14 1.02e-07 GAAAATGAAA CCCTGTTCTTTAGCCCTACAGCACTTCTAC ATAGCCCTAA chrXIII:20-220 + 64 1.02e-07 GAAAATGAAA CCCTGTTCTTTAGCCCTACAGCACTTCTAC ATAGCCC chrXII:4-285 + 62 1.02e-07 GAAAATGAAA CCCTGTTCTTTAGCCCTACAGCACTTCTAC ATAGCCCTA chrXIV:61965-64820 - 11 5.57e-07 CTATGCATAA ACCTACAAACTATCATTCACACACTTTTCC CATTTTTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYCTYCDSATTASHAGTSMGACGCBTTDCC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrVII:828477-828990 3.3e-14 65_[+3]_5 chrII:405642-406209 3.3e-14 18_[-3]_52 chrXI:162282-162764 3.3e-14 39_[+3]_31 chrXIII:131639-132093 3.3e-14 34_[+3]_36 chrX:374193-374293 3.3e-14 56_[+3]_14 chrXIII:747769-748149 3.3e-14 8_[+3]_62 chrXIV:104604-105117 5.6e-14 11_[-3]_59 chrIX:174796-175377 5.6e-14 11_[-3]_59 chrIX:325513-326096 5.6e-14 10_[-3]_60 chrIV:434013-434538 5.6e-14 64_[+3]_6 chrII:266186-266700 5.6e-14 1_[-3]_69 chrVII:1004030-1004421 6.3e-12 56_[-3]_14 chrVIII:466750-467262 6.3e-12 49_[-3]_21 chrXVI:744000-744570 6.3e-12 64_[-3]_6 chrVII:661529-661993 6.3e-12 53_[-3]_17 chrVIII:358272-358759 1.3e-10 38_[+3]_32 chrVIII:237669-238152 1.3e-10 13_[+3]_57 chrXVI:622324-622850 1.3e-10 28_[+3]_42 chrXVI:560015-560512 1.3e-10 10_[+3]_60 chrVI:157665-158227 1.3e-10 45_[+3]_25 chrX:233712-233812 1.8e-10 7_[-3]_63 chrIV:619711-620255 3.2e-10 61_[+3]_9 chrXI:46533-47013 3.2e-10 37_[+3]_33 chrXII:374190-374651 3.2e-10 1_[-3]_69 chrXIV:374684-375150 9.7e-10 36_[-3]_34 chrIV:1095179-1095688 2.5e-09 12_[+3]_58 chrXIII:352070-352562 2.9e-09 48_[-3]_22 chrV:288199-288722 3.7e-09 67_[+3]_3 chrXVI:689372-689875 3.7e-09 8_[-3]_62 chrX:538351-538451 9.2e-09 45_[-3]_25 chrXVI:338624-339155 3.8e-08 50_[+3]_20 chrV:99891-100345 3.8e-08 64_[-3]_6 chrX:517645-517745 3.8e-08 41_[+3]_29 chrVIII:21-298 6.9e-08 8_[+3]_62 chrXV:1091104-1091291 1e-07 13_[-3]_57 chrXIII:20-220 1e-07 63_[+3]_7 chrXII:4-285 1e-07 61_[+3]_9 chrXIV:61965-64820 5.6e-07 10_[-3]_60 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYCTYCDSATTASHAGTSMGACGCBTTDCC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AYCTYCDSATTASHAGTSMGACGCBTTDCC width=30 seqs=38 chrVII:828477-828990 ( 66) ATCTTCTGATTAGAAGTCAGACGCGTTGCC 1 chrII:405642-406209 ( 19) ATCTTCTGATTAGAAGTCAGACGCGTTGCC 1 chrXI:162282-162764 ( 40) ATCTTCTGATTAGAAGTCAGACGCGTTGCC 1 chrXIII:131639-132093 ( 35) ATCTTCTGATTAGAAGTCAGACGCGTTGCC 1 chrX:374193-374293 ( 57) ATCTTCTGATTAGAAGTCAGACGCGTTGCC 1 chrXIII:747769-748149 ( 9) ATCTTCTGATTAGAAGTCAGACGCGTTGCC 1 chrXIV:104604-105117 ( 12) ATCTCCACATTACTAGTGTGGCGCCTTACC 1 chrIX:174796-175377 ( 12) ATCTCCACATTACTAGTGTGGCGCCTTACC 1 chrIX:325513-326096 ( 11) ATCTCCACATTACTAGTGTGGCGCCTTACC 1 chrIV:434013-434538 ( 65) ATCTCCACATTACTAGTGTGGCGCCTTACC 1 chrII:266186-266700 ( 2) ATCTCCACATTACTAGTGTGGCGCCTTACC 1 chrVII:1004030-1004421 ( 57) ACCTTTGCATTACAAGTGCAACGCTCTACC 1 chrVIII:466750-467262 ( 50) ACCTTTGCATTACAAGTGCAACGCTCTACC 1 chrXVI:744000-744570 ( 65) ACCTTTGCATTACAAGTGCAACGCTCTACC 1 chrVII:661529-661993 ( 54) ACCTTTGCATTACAAGTGCAACGCTCTACC 1 chrVIII:358272-358759 ( 39) ACCTCCAGATAACTTGACCGAAGTTTTTTC 1 chrVIII:237669-238152 ( 14) ACCTCCAGATAACTTGACCGAAGTTTTTTC 1 chrXVI:622324-622850 ( 29) ACCTCCAGATAACTTGACCGAAGTTTTTTC 1 chrXVI:560015-560512 ( 11) ACCTCCAGATAACTTGACCGAAGTTTTTTC 1 chrVI:157665-158227 ( 46) ACCTCCAGATAACTTGACCGAAGTTTTTTC 1 chrX:233712-233812 ( 8) ATCTCCTGGTTCGTAGCCAGACGCCGTGAC 1 chrIV:619711-620255 ( 62) ATCTTCTGGTTCGTAGCCAGACGCCGTGAC 1 chrXI:46533-47013 ( 38) ATCCCCGCATTACGAGTGCGATGCCTTACC 1 chrXII:374190-374651 ( 2) ATCTTCTGGTTCGTAGCCAGACGCCGTGAC 1 chrXIV:374684-375150 ( 37) ACCTCCAGATGACTTGACCGAAGTTTTTCT 1 chrIV:1095179-1095688 ( 13) ACCTCCAGATATCTTGACCAAAGTTTTTTC 1 chrXIII:352070-352562 ( 49) ACCTCCAGATAACTTGACCGAAGTATTTCT 1 chrV:288199-288722 ( 68) CCCAACAGATTTCAAGTCTGTCGCCTTAAC 1 chrXVI:689372-689875 ( 9) CCCAACAGATTTCAAGTCTGTCGCCTTAAC 1 chrX:538351-538451 ( 46) GTCTTCTCCTTAGGAGGGAGACGCGTTACC 1 chrXVI:338624-339155 ( 51) CCCTGCGCGCTTCCACTGCGCCACGGCGCT 1 chrV:99891-100345 ( 65) CCCTGCGCGCTTCCACTGCGCCACGGCGCT 1 chrX:517645-517745 ( 42) CCCTGCGCGCTTCCACTGCGCCACGGCGCT 1 chrVIII:21-298 ( 9) CCCTGTTCTTTAGCCCTACAACACTTCTAC 1 chrXV:1091104-1091291 ( 14) CCCTGTTCTTTAGCCCTACAGCACTTCTAC 1 chrXIII:20-220 ( 64) CCCTGTTCTTTAGCCCTACAGCACTTCTAC 1 chrXII:4-285 ( 62) CCCTGTTCTTTAGCCCTACAGCACTTCTAC 1 chrXIV:61965-64820 ( 11) ACCTACAAACTATCATTCACACACTTTTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYCTYCDSATTASHAGTSMGACGCBTTDCC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 7.64071 E= 1.0e-119 126 30 -287 -1189 -1189 159 -1189 45 -1189 237 -1189 -1189 -254 -287 -1189 158 -196 103 -7 16 -1189 203 -1189 -55 45 -1189 13 26 -354 130 137 -1189 121 -287 -29 -154 -1189 -87 -1189 154 -74 -1189 -287 136 131 -129 -1189 -96 -1189 165 93 -354 4 13 -187 45 116 -87 -1189 -55 -1189 -7 203 -354 -55 -129 -287 116 -154 145 93 -1189 -9 145 -1189 -74 -38 -287 193 -1189 110 -129 13 -254 -55 198 -1189 -354 -55 -1189 203 -1189 -1189 203 -1189 -55 -354 59 45 45 -1189 -87 -29 126 -1189 -7 -1189 141 16 -1189 71 16 -38 165 -1189 -96 -1189 217 -1189 -122 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYCTYCDSATTASHAGTSMGACGCBTTDCC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 38 E= 1.0e-119 0.736842 0.236842 0.026316 0.000000 0.000000 0.578947 0.000000 0.421053 0.000000 1.000000 0.000000 0.000000 0.052632 0.026316 0.000000 0.921053 0.078947 0.394737 0.184211 0.342105 0.000000 0.789474 0.000000 0.210526 0.421053 0.000000 0.210526 0.368421 0.026316 0.473684 0.500000 0.000000 0.710526 0.026316 0.157895 0.105263 0.000000 0.105263 0.000000 0.894737 0.184211 0.000000 0.026316 0.789474 0.763158 0.078947 0.000000 0.157895 0.000000 0.605263 0.368421 0.026316 0.315789 0.210526 0.052632 0.421053 0.684211 0.105263 0.000000 0.210526 0.000000 0.184211 0.789474 0.026316 0.210526 0.078947 0.026316 0.684211 0.105263 0.526316 0.368421 0.000000 0.289474 0.526316 0.000000 0.184211 0.236842 0.026316 0.736842 0.000000 0.657895 0.078947 0.210526 0.052632 0.210526 0.763158 0.000000 0.026316 0.210526 0.000000 0.789474 0.000000 0.000000 0.789474 0.000000 0.210526 0.026316 0.289474 0.263158 0.421053 0.000000 0.105263 0.157895 0.736842 0.000000 0.184211 0.000000 0.815789 0.342105 0.000000 0.315789 0.342105 0.236842 0.605263 0.000000 0.157895 0.000000 0.868421 0.000000 0.131579 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AYCTYCDSATTASHAGTSMGACGCBTTDCC MEME-3 regular expression -------------------------------------------------------------------------------- [AC][CT]CT[CT][CT][ATG][GC]ATTA[CG][TAC][AT]G[TA][CG][CA][GA][AG][CA][GA][CT][TCG]TT[ATG][CA]C -------------------------------------------------------------------------------- Time 962.98 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrII:332302-333892 1.82e-01 100 chrVIII:48217-48562 5.56e-01 100 chrXV:0-1025 8.26e-01 100 chrVI:224908-225324 3.58e-01 100 chrXI:146891-147260 3.65e-01 100 chrI:180933-181469 1.46e-02 77_[-1(4.52e-06)]_2 chrIV:1489019-1490584 6.32e-01 100 chrXVI:810455-810888 5.95e-05 59_[-2(6.94e-09)]_20 chrXIII:504672-505201 1.05e-03 13_[-2(1.27e-07)]_66 chrVII:371166-371530 4.07e-01 100 chrVII:287157-287684 2.97e-01 100 chrXI:307905-308441 6.04e-10 25_[+1(4.25e-09)]_22_[+2(1.80e-08)]_\ 11 chrIV:802555-803014 1.15e-09 1_[+1(4.20e-10)]_20_[+2(2.73e-06)]_\ 37 chrIII:162162-163926 4.08e-01 100 chrXVI:340513-340945 7.25e-02 100 chrIV:1175597-1176049 7.19e-04 60_[-2(3.94e-07)]_19 chrXI:513166-513642 3.80e-03 23_[+2(2.25e-06)]_56 chrIX:427027-427761 4.77e-01 100 chrXIV:503053-503450 5.74e-01 100 chrIV:1075285-1075765 9.96e-08 1_[+1(4.91e-09)]_78 chrXII:374190-374651 6.44e-11 1_[-3(3.19e-10)]_[-1(5.87e-08)]_48 chrIX:394665-395181 7.40e-01 100 chrII:266186-266700 4.56e-14 1_[-3(5.65e-14)]_[-1(6.53e-08)]_48 chrXI:382110-382502 6.76e-01 100 chrXVI:134919-135283 8.97e-01 100 chrVII:310466-312286 9.41e-01 100 chrXV:759026-759547 5.96e-01 100 chrXII:5449-5941 6.88e-02 100 chrVII:738897-739585 2.36e-01 100 chrXV:866535-867216 4.84e-01 100 chrXIII:23643-26532 1.83e-02 12_[+3(4.78e-05)]_58 chrV:130832-131402 3.07e-09 19_[+1(2.33e-09)]_20_[+2(2.73e-06)]_\ 19 chrXVI:576117-576404 2.12e-01 100 chrII:604074-607056 4.72e-01 100 chrIV:976029-976793 7.80e-01 100 chrXV:673625-674063 5.56e-01 100 chrII:135929-136365 4.67e-02 100 chrXIII:650739-651800 8.86e-01 100 chrVI:220800-222086 5.30e-01 100 chrXII:728145-728616 9.63e-01 100 chrVIII:85099-85573 5.56e-10 16_[+1(4.25e-09)]_22_[+2(1.80e-08)]_\ 20 chrX:517645-517745 3.87e-08 4_[+1(2.79e-07)]_16_[+3(3.76e-08)]_\ 29 chrVII:227478-228790 9.01e-01 100 chrVIII:174978-175716 9.83e-01 100 chrXII:837620-839446 8.18e-01 100 chrXIII:224013-224503 9.25e-01 100 chrXIV:88909-89699 8.65e-01 100 chrXIV:725951-726415 1.58e-09 5_[+1(1.46e-07)]_32_[+2(3.44e-09)]_\ 21 chrVII:323474-324105 4.31e-01 100 chrXVI:731636-732327 1.01e-01 100 chrXII:1051922-1052334 3.09e-11 40_[+2(4.43e-10)]_39 chrIX:232740-232976 5.93e-01 100 chrXV:638907-639489 8.41e-01 100 chrXIII:195924-196400 1.28e-03 32_[+2(4.33e-07)]_47 chrVII:806148-808114 3.08e-01 100 chrXI:578765-579341 1.82e-05 31_[-1(2.33e-09)]_48 chrX:355143-355243 1.50e-07 29_[-1(2.36e-08)]_20_[-2(2.25e-06)]_\ 9 chrVI:191303-191806 8.88e-05 13_[+1(5.26e-08)]_66 chrXVI:214590-215669 8.52e-01 100 chrVI:101162-101595 6.74e-05 52_[-2(4.33e-07)]_27 chrI:202540-202845 7.87e-01 100 chrXII:808952-809577 9.85e-01 100 chrXII:4-285 4.89e-04 61_[+3(1.02e-07)]_9 chrXI:0-1072 9.87e-03 67_[-2(3.48e-06)]_12 chrV:241952-242682 1.81e-01 100 chrIV:1256872-1257291 1.32e-04 22_[+2(7.34e-07)]_57 chrVII:115259-115782 3.75e-05 22_[-2(1.96e-09)]_57 chrXIII:302764-303184 6.68e-01 100 chrXIII:914525-915635 2.98e-02 20_[-1(6.41e-05)]_59 chrXII:1064023-1065387 3.35e-01 100 chrXII:589035-589280 8.87e-01 100 chrVII:930759-931234 4.38e-10 11_[+1(1.56e-10)]_19_[+2(4.33e-07)]_\ 28 chrXI:99689-100045 7.39e-01 100 chrIII:142150-142990 9.86e-01 100 chrXII:962755-963334 3.93e-06 35_[+2(3.44e-09)]_44 chrIII:177086-178778 3.77e-01 100 chrV:303883-306913 5.62e-01 100 chrXII:459603-459982 2.36e-01 100 chrIV:1354541-1356085 2.98e-01 100 chrXII:167719-168249 7.30e-11 14_[+1(7.26e-08)]_30_[+2(1.60e-09)]_\ 14 chrVII:148049-149529 4.13e-01 100 chrXVI:520001-520546 6.32e-01 100 chrVI:95467-95933 2.01e-02 100 chrIII:11079-11525 5.42e-01 100 chrVII:766063-766517 5.39e-01 100 chrXII:426884-427445 5.23e-08 22_[-2(2.25e-06)]_20_[-1(7.46e-09)]_\ 16 chrXVI:377975-379031 8.61e-01 100 chrXII:920896-922602 3.53e-01 100 chrXV:978761-979531 1.56e-01 100 chrVII:1050200-1050692 1.93e-01 100 chrVI:226519-226982 1.42e-06 34_[+2(1.80e-08)]_45 chrXI:46533-47013 3.10e-12 16_[+1(4.71e-08)]_[+3(3.19e-10)]_1_\ [-2(9.97e-05)]_11 chrXV:1049041-1049409 4.84e-01 100 chrIV:434013-434538 4.56e-14 43_[+1(6.53e-08)]_[+3(5.65e-14)]_6 chrXV:226427-226887 2.21e-10 8_[+1(1.56e-10)]_19_[+2(4.33e-07)]_\ 31 chrVII:661529-661993 1.21e-08 53_[-3(6.28e-12)]_17 chrXVI:209968-210702 6.14e-01 100 chrXII:605146-605616 2.35e-05 75_[+2(1.54e-08)]_4 chrXVI:794463-796047 7.55e-01 100 chrVIII:296830-297260 3.25e-01 100 chrV:551064-551563 9.69e-16 26_[+1(4.25e-09)]_22_[+2(4.43e-10)]_\ 10 chrXII:10994-12010 6.65e-02 100 chrXVI:585803-586335 7.55e-01 100 chrIII:68371-68669 7.63e-01 100 chrII:159791-160071 3.93e-01 100 chrIII:58644-59066 8.87e-01 100 chrVIII:21-298 3.07e-04 8_[+3(6.88e-08)]_62 chrXVI:901413-901896 7.49e-01 100 chrIV:216606-218061 5.20e-02 18_[+1(7.68e-05)]_61 chrXV:113564-114118 4.11e-19 27_[-3(5.65e-14)]_[-1(6.53e-08)]_22 chrXIII:122967-124736 9.15e-01 100 chrIX:370217-370604 4.11e-01 100 chrV:569392-570394 9.34e-01 100 chrI:81893-82403 1.41e-01 100 chrV:99891-100345 7.97e-05 64_[-3(3.76e-08)]_6 chrIV:980786-981262 7.30e-11 4_[+1(7.26e-08)]_30_[+2(1.60e-09)]_\ 24 chrXV:619211-624641 1.71e-02 37_[-2(2.68e-05)]_42 chrXII:950593-953525 4.84e-01 100 chrIX:336110-336639 5.23e-08 29_[+1(7.46e-09)]_20_[+2(2.25e-06)]_\ 9 chrXV:487235-487705 1.74e-09 23_[-2(6.94e-09)]_22_[-1(3.32e-07)]_\ 13 chrVII:706924-707354 4.58e-07 23_[+1(4.28e-07)]_[+3(3.28e-06)]_26 chrXIII:549892-553256 7.51e-01 100 chrVIII:125870-127816 2.10e-01 100 chrXVI:880108-880579 9.69e-16 7_[+1(4.25e-09)]_22_[+2(4.43e-10)]_\ 29 chrV:430981-431567 1.95e-03 15_[+1(4.52e-06)]_64 chrVII:479134-482980 2.71e-01 100 chrXV:1040416-1040806 3.69e-01 100 chrXIII:747769-748149 4.05e-10 8_[+3(3.26e-14)]_62 chrXV:903892-904684 8.28e-01 100 chrX:541314-541414 5.23e-08 4_[-2(2.25e-06)]_20_[-1(7.46e-09)]_\ 34 chrVII:625144-625597 2.34e-01 100 chrX:415781-415881 6.27e-02 100 chrXII:656685-657209 2.60e-03 41_[+1(3.62e-07)]_38 chrXII:282448-283929 6.46e-01 100 chrXVI:744000-744570 2.45e-08 64_[-3(6.28e-12)]_6 chrXIII:586415-586919 6.04e-10 23_[+1(4.25e-09)]_22_[+2(1.80e-08)]_\ 13 chrXIV:493440-495634 6.97e-01 100 chrIX:129722-130228 7.43e-01 100 chrVII:533850-535223 3.64e-01 100 chrXI:517766-518166 8.38e-06 76_[-2(8.63e-10)]_3 chrXI:355226-356625 2.04e-02 28_[-1(3.49e-05)]_51 chrIV:358054-358613 5.06e-01 100 chrXI:617712-619245 5.31e-01 100 chrXV:710010-710530 1.96e-03 26_[-1(2.79e-07)]_53 chrX:422678-422778 1.26e-13 29_[-3(3.51e-10)]_[-1(3.62e-07)]_20 chrIV:1524007-1525677 1.21e-02 65_[+2(4.89e-06)]_14 chrVII:472326-472713 4.34e-02 100 chrX:606335-606435 9.57e-02 100 chrXI:108720-110161 4.71e-01 100 chrIV:519540-519961 1.12e-05 47_[-2(3.44e-09)]_32 chrXIII:905535-906210 5.64e-01 100 chrVII:986784-987896 2.35e-01 100 chrXIII:420254-420877 2.68e-05 77_[+1(4.25e-09)]_2 chrXIII:20-220 7.08e-04 63_[+3(1.02e-07)]_7 chrVIII:148914-149302 4.26e-01 100 chrV:311526-312302 5.82e-01 100 chrVII:592419-593010 2.57e-02 44_[-3(9.07e-05)]_26 chrX:90004-90104 4.22e-01 100 chrIV:464945-465527 3.98e-01 100 chrIV:221141-222380 6.81e-01 100 chrVIII:34394-36417 4.01e-02 20_[+2(6.42e-05)]_59 chrXIII:290589-291145 1.50e-07 29_[-1(1.56e-10)]_50 chrVI:157665-158227 3.85e-10 24_[+1(1.90e-06)]_[+3(1.29e-10)]_25 chrIII:13997-16950 7.63e-01 100 chrXIII:5314-5801 6.07e-01 100 chrXII:468747-469004 9.07e-04 34_[-2(4.15e-06)]_45 chrXII:1028161-1028626 7.44e-01 100 chrVIII:103858-104823 1.18e-01 100 chrX:542757-542857 2.88e-08 [+1(2.13e-07)]_37_[+2(2.18e-07)]_21 chrXV:161080-162058 1.35e-01 100 chrX:233712-233812 8.20e-12 7_[-3(1.75e-10)]_[-1(9.79e-09)]_42 chrIV:568673-569248 1.50e-07 17_[-1(2.36e-08)]_20_[-2(2.25e-06)]_\ 21 chrXI:490700-491382 6.85e-04 23_[-1(5.87e-08)]_56 chrXIV:96010-96624 3.37e-03 19_[+2(1.59e-06)]_13_[-2(1.45e-05)]_\ 26 chrM:60487-61463 7.17e-01 100 chrXIV:602100-602548 5.26e-10 42_[-2(4.43e-10)]_37 chrX:424290-424390 7.49e-06 27_[+2(3.44e-09)]_52 chrII:88946-90060 1.00e+00 100 chrX:414754-414854 6.51e-11 24_[-2(1.80e-08)]_21_[-1(4.22e-08)]_\ 13 chrVI:162006-162429 1.18e-03 65_[-2(4.33e-07)]_14 chrIV:1161558-1161989 4.97e-01 100 chrXVI:819290-819795 5.62e-10 41_[-2(4.43e-10)]_38 chrV:492188-492575 1.71e-14 25_[+1(5.87e-08)]_[+3(3.19e-10)]_24 chrVIII:132855-133363 2.28e-06 22_[+2(1.60e-09)]_57 chrI:182358-182803 2.30e-06 47_[+2(1.60e-09)]_32 chrIX:177560-178174 8.91e-01 100 chrIX:248610-249503 1.76e-01 100 chrV:6132-6691 3.95e-01 100 chrIV:1087015-1087337 5.23e-01 100 chrXII:687648-688171 1.13e-10 4_[+1(4.25e-09)]_22_[+2(1.80e-08)]_\ 32 chrXII:611642-612101 5.29e-01 100 chrVII:919789-920296 7.14e-01 100 chrII:680301-682283 4.80e-01 100 chrXII:47646-49236 9.82e-01 100 chrII:197257-197881 3.76e-05 22_[-1(4.25e-09)]_57 chrVIII:62553-62930 3.82e-01 100 chrXV:91520-91682 6.93e-01 100 chrX:607750-607850 6.99e-01 100 chrIX:325513-326096 4.56e-14 10_[-3(5.65e-14)]_[-1(6.53e-08)]_39 chrV:221443-221852 4.31e-02 100 chrIV:1012795-1014028 9.23e-01 100 chrXIII:808018-808547 4.07e-09 18_[+1(5.06e-10)]_20_[+2(2.73e-06)]_\ 20 chrXIII:168599-169049 8.84e-05 25_[-2(2.18e-07)]_54 chrXIV:569666-570147 9.69e-16 15_[+1(4.25e-09)]_22_[+2(4.43e-10)]_\ 21 chrVII:555062-557452 4.24e-01 100 chrI:229148-230195 4.76e-03 24_[+2(4.89e-06)]_55 chrVI:106489-106895 1.24e-01 100 chrX:374193-374293 3.42e-15 35_[+1(2.36e-08)]_[+3(3.26e-14)]_14 chrVII:483296-483742 1.47e-01 19_[-1(9.16e-05)]_60 chrXIV:631674-632134 3.06e-03 37_[+2(5.74e-06)]_42 chrXVI:560015-560512 3.65e-11 10_[+3(1.29e-10)]_10_[+2(5.44e-08)]_\ 29 chrV:117575-118302 2.38e-01 100 chrXVI:404187-407885 6.39e-01 100 chrXII:460407-460682 6.16e-01 100 chrXV:340111-340601 3.91e-10 18_[+3(3.19e-10)]_52 chrIV:322180-323622 6.19e-01 100 chrV:487084-487626 4.78e-06 30_[+1(8.70e-10)]_49 chrXVI:338624-339155 3.87e-08 13_[+1(2.79e-07)]_16_[+3(3.76e-08)]_\ 20 chrV:435612-436017 2.47e-06 34_[+2(1.80e-08)]_45 chrXV:300872-301441 4.07e-05 66_[-1(9.79e-09)]_13 chrXIII:605790-606074 3.89e-01 100 chrV:176900-177422 4.36e-06 33_[-1(8.70e-10)]_46 chrXVI:586733-586929 9.32e-01 100 chrXV:1053849-1054407 5.90e-02 54_[-3(7.70e-05)]_16 chrV:441788-442668 9.66e-01 100 chrXIII:797908-798236 6.00e-01 100 chrVI:269271-270160 6.44e-01 100 chrXII:793692-796122 8.46e-01 100 chrII:226854-227395 7.30e-11 5_[-2(1.60e-09)]_30_[-1(7.26e-08)]_\ 23 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6.05e-01 100 chrVIII:466750-467262 7.02e-12 49_[-3(6.28e-12)]_[-1(6.94e-07)] chrXVI:689372-689875 3.81e-09 8_[-3(3.70e-09)]_9_[-1(2.55e-07)]_\ 32 chrXVI:302614-304222 9.58e-02 100 chrV:42109-42640 5.10e-01 100 chrIV:1016975-1017511 7.87e-07 18_[+1(1.26e-10)]_61 chrXV:594223-594672 3.85e-03 2_[+2(7.34e-07)]_77 chrV:152076-153301 9.49e-01 100 chrXV:1091104-1091291 4.89e-04 13_[-3(1.02e-07)]_57 chrXVI:55846-56510 2.73e-03 45_[+1(4.65e-07)]_34 chrXIII:145873-147581 4.14e-01 100 chrIV:543584-544017 2.05e-01 100 chrIV:835734-836371 2.42e-01 100 chrII:504470-504740 1.91e-01 100 chrIV:1305414-1306065 9.11e-01 100 chrXVI:622324-622850 3.60e-14 7_[+1(1.90e-06)]_[+3(1.29e-10)]_10_\ [+2(5.44e-08)]_11 chrVII:122070-122652 1.22e-04 4_[-1(4.22e-08)]_75 chrXII:897673-899687 9.18e-01 100 chrXIII:352070-352562 6.88e-13 18_[-2(5.44e-08)]_9_[-3(2.92e-09)]_\ [-1(1.90e-06)]_1 chrVII:352293-352577 2.96e-01 100 chrV:288199-288722 3.91e-09 37_[+1(2.55e-07)]_9_[+3(3.70e-09)]_\ 3 chrVII:648112-648475 7.79e-01 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chrIV:1095179-1095688 4.75e-10 12_[+3(2.48e-09)]_10_[+2(2.77e-08)]_\ 27 chrXII:645812-646281 6.16e-01 100 chrV:362140-363265 5.24e-01 100 chrIV:1507028-1507692 1.57e-01 100 chrXII:975818-976273 1.15e-05 35_[+2(6.94e-09)]_44 chrVIII:358272-358759 3.60e-14 17_[+1(1.90e-06)]_[+3(1.29e-10)]_10_\ [+2(5.44e-08)]_1 chrVIII:555820-557222 1.37e-01 100 chrXVI:828710-829432 9.06e-01 100 chrXII:214710-215153 1.68e-14 6_[+1(6.50e-09)]_21_[+2(8.63e-10)]_\ 31 chrXV:424088-424869 3.45e-01 100 chrV:443073-443494 4.14e-06 16_[+2(4.43e-10)]_63 chrXV:908454-909135 1.84e-01 100 chrVII:788292-788773 4.81e-01 100 chrIV:884150-884654 2.35e-05 13_[-2(1.54e-08)]_66 chrXI:260431-260935 8.59e-01 100 chrVIII:293372-293575 2.02e-01 100 chrII:167728-169657 6.54e-01 100 chrV:110510-110915 1.98e-01 100 chrXII:1017707-1019426 2.36e-01 100 chrVI:63986-65382 5.09e-01 100 chrVII:401375-401777 7.89e-07 5_[+1(8.70e-10)]_74 chrVII:845394-845942 5.59e-10 35_[-2(4.33e-07)]_19_[-1(1.56e-10)]_\ 4 chrM:61843-62082 8.23e-01 100 chrVII:702851-703654 1.90e-01 100 chrXIII:923165-924384 5.93e-03 47_[+2(1.28e-06)]_32 chrVII:609272-610122 9.15e-01 100 chrV:438492-438963 6.04e-10 27_[-2(1.80e-08)]_22_[-1(4.25e-09)]_\ 9 chrXIV:426909-427286 1.74e-01 100 chrX:617702-617802 4.83e-07 22_[-2(2.37e-09)]_6_[+1(6.18e-05)]_\ 30 chrXI:430784-432346 8.17e-01 100 chrXVI:40155-40611 1.50e-02 2_[+2(7.33e-05)]_77 chrVI:180694-181260 3.21e-06 51_[+1(1.56e-10)]_28 chrIV:538822-539613 1.27e-01 100 chrXV:925188-925458 8.46e-01 100 chrXII:903340-903698 5.49e-01 100 chrXV:1003926-1004930 6.03e-01 100 chrVII:1004030-1004421 2.45e-08 56_[-3(6.28e-12)]_14 chrIII:82257-82765 4.78e-06 5_[+1(8.70e-10)]_74 chrX:545412-545512 1.63e-01 100 chrIX:381923-382531 9.94e-01 100 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: kali.stanford.edu ********************************************************************************